| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0025945.1 gag/pol protein [Cucumis melo var. makuwa] | 4.8e-94 | 93.19 | Show/hide |
Query: MTRRSVRIVSQPNRYLGLTETQVVIPDNGVQDPLSFKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKRIYKRKRDSAGKVQTFKARL
M RRS R+VSQPNRYLGLTETQVVIPD+GV+DPLS+KQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCK IYKRKRDSAGKVQTFKARL
Subjt: MTRRSVRIVSQPNRYLGLTETQVVIPDNGVQDPLSFKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKRIYKRKRDSAGKVQTFKARL
Query: VAKGYTQREGVDYEETFSPVAMLKCIRILLSIATFYDYEIWQMDVKIAFLNGNLEESIFMSKPE-FITQGQKQKVCKLNRSIYGLKQESRS
VAKGYTQREGVDYEETFSPVAMLK IRILLSIATFYDYEIWQMDVK AFLNGNLEESIFMS+PE FITQGQ+QKVCKLNRSIYGLKQ SRS
Subjt: VAKGYTQREGVDYEETFSPVAMLKCIRILLSIATFYDYEIWQMDVKIAFLNGNLEESIFMSKPE-FITQGQKQKVCKLNRSIYGLKQESRS
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| KAA0059226.1 gag/pol protein [Cucumis melo var. makuwa] | 4.8e-94 | 93.19 | Show/hide |
Query: MTRRSVRIVSQPNRYLGLTETQVVIPDNGVQDPLSFKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKRIYKRKRDSAGKVQTFKARL
M RRS R+VSQPNRYLGLTETQVVIPD+GV+DPLS+KQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCK IYKRKRDSAGKVQTFKARL
Subjt: MTRRSVRIVSQPNRYLGLTETQVVIPDNGVQDPLSFKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKRIYKRKRDSAGKVQTFKARL
Query: VAKGYTQREGVDYEETFSPVAMLKCIRILLSIATFYDYEIWQMDVKIAFLNGNLEESIFMSKPE-FITQGQKQKVCKLNRSIYGLKQESRS
VAKGYTQREGVDYEETFSPVAMLK IRILLSIATFYDYEIWQMDVK AFLNGNLEESIFMS+PE FITQGQ+QKVCKLNRSIYGLKQ SRS
Subjt: VAKGYTQREGVDYEETFSPVAMLKCIRILLSIATFYDYEIWQMDVKIAFLNGNLEESIFMSKPE-FITQGQKQKVCKLNRSIYGLKQESRS
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| TYK02840.1 gag/pol protein [Cucumis melo var. makuwa] | 3.1e-93 | 92.67 | Show/hide |
Query: MTRRSVRIVSQPNRYLGLTETQVVIPDNGVQDPLSFKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKRIYKRKRDSAGKVQTFKARL
M RRS R+VSQPNRYLGLTETQVVIPD+GV+DPLS+KQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCK IYKRKRDSAGKVQTFKARL
Subjt: MTRRSVRIVSQPNRYLGLTETQVVIPDNGVQDPLSFKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKRIYKRKRDSAGKVQTFKARL
Query: VAKGYTQREGVDYEETFSPVAMLKCIRILLSIATFYDYEIWQMDVKIAFLNGNLEESIFMSKPE-FITQGQKQKVCKLNRSIYGLKQESRS
VAKGYTQREGVDYEETFSPVAMLK IRILLSIATFYDYEIWQMDVK AFLNGNLEESIFMS+PE FITQGQ+QKVCKLN SIYGLKQ SRS
Subjt: VAKGYTQREGVDYEETFSPVAMLKCIRILLSIATFYDYEIWQMDVKIAFLNGNLEESIFMSKPE-FITQGQKQKVCKLNRSIYGLKQESRS
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| TYK15984.1 gag/pol protein [Cucumis melo var. makuwa] | 4.8e-94 | 93.19 | Show/hide |
Query: MTRRSVRIVSQPNRYLGLTETQVVIPDNGVQDPLSFKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKRIYKRKRDSAGKVQTFKARL
M RRS R+VSQPNRYLGLTETQVVIPD+GV+DPLS+KQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCK IYKRKRDSAGKVQTFKARL
Subjt: MTRRSVRIVSQPNRYLGLTETQVVIPDNGVQDPLSFKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKRIYKRKRDSAGKVQTFKARL
Query: VAKGYTQREGVDYEETFSPVAMLKCIRILLSIATFYDYEIWQMDVKIAFLNGNLEESIFMSKPE-FITQGQKQKVCKLNRSIYGLKQESRS
VAKGYTQREGVDYEETFSPVAMLK IRILLSIATFYDYEIWQMDVK AFLNGNLEESIFMS+PE FITQGQ+QKVCKLNRSIYGLKQ SRS
Subjt: VAKGYTQREGVDYEETFSPVAMLKCIRILLSIATFYDYEIWQMDVKIAFLNGNLEESIFMSKPE-FITQGQKQKVCKLNRSIYGLKQESRS
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| TYK28885.1 gag/pol protein [Cucumis melo var. makuwa] | 1.2e-92 | 91.62 | Show/hide |
Query: MTRRSVRIVSQPNRYLGLTETQVVIPDNGVQDPLSFKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKRIYKRKRDSAGKVQTFKARL
M RRS R+VSQPNRYLGLTETQVVIPD+GV+DPLS+KQAMNDVDKDQWVKA+DLEMESMYFNSVWELVDLPEGVKPIGCK IYKRKRDSAGKVQTFKARL
Subjt: MTRRSVRIVSQPNRYLGLTETQVVIPDNGVQDPLSFKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKRIYKRKRDSAGKVQTFKARL
Query: VAKGYTQREGVDYEETFSPVAMLKCIRILLSIATFYDYEIWQMDVKIAFLNGNLEESIFMSKPE-FITQGQKQKVCKLNRSIYGLKQESRS
VAKGYTQREGVDYEETFSPVAMLK IRILLSIATFYDYEIWQMDVK AFLNGNLEESIF+S+P+ FITQGQ+QKVCKLNRSIYGLKQ SRS
Subjt: VAKGYTQREGVDYEETFSPVAMLKCIRILLSIATFYDYEIWQMDVKIAFLNGNLEESIFMSKPE-FITQGQKQKVCKLNRSIYGLKQESRS
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TZD0 Gag/pol protein | 2.3e-94 | 93.19 | Show/hide |
Query: MTRRSVRIVSQPNRYLGLTETQVVIPDNGVQDPLSFKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKRIYKRKRDSAGKVQTFKARL
M RRS R+VSQPNRYLGLTETQVVIPD+GV+DPLS+KQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCK IYKRKRDSAGKVQTFKARL
Subjt: MTRRSVRIVSQPNRYLGLTETQVVIPDNGVQDPLSFKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKRIYKRKRDSAGKVQTFKARL
Query: VAKGYTQREGVDYEETFSPVAMLKCIRILLSIATFYDYEIWQMDVKIAFLNGNLEESIFMSKPE-FITQGQKQKVCKLNRSIYGLKQESRS
VAKGYTQREGVDYEETFSPVAMLK IRILLSIATFYDYEIWQMDVK AFLNGNLEESIFMS+PE FITQGQ+QKVCKLNRSIYGLKQ SRS
Subjt: VAKGYTQREGVDYEETFSPVAMLKCIRILLSIATFYDYEIWQMDVKIAFLNGNLEESIFMSKPE-FITQGQKQKVCKLNRSIYGLKQESRS
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| A0A5A7UYE8 Gag/pol protein | 2.3e-94 | 93.19 | Show/hide |
Query: MTRRSVRIVSQPNRYLGLTETQVVIPDNGVQDPLSFKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKRIYKRKRDSAGKVQTFKARL
M RRS R+VSQPNRYLGLTETQVVIPD+GV+DPLS+KQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCK IYKRKRDSAGKVQTFKARL
Subjt: MTRRSVRIVSQPNRYLGLTETQVVIPDNGVQDPLSFKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKRIYKRKRDSAGKVQTFKARL
Query: VAKGYTQREGVDYEETFSPVAMLKCIRILLSIATFYDYEIWQMDVKIAFLNGNLEESIFMSKPE-FITQGQKQKVCKLNRSIYGLKQESRS
VAKGYTQREGVDYEETFSPVAMLK IRILLSIATFYDYEIWQMDVK AFLNGNLEESIFMS+PE FITQGQ+QKVCKLNRSIYGLKQ SRS
Subjt: VAKGYTQREGVDYEETFSPVAMLKCIRILLSIATFYDYEIWQMDVKIAFLNGNLEESIFMSKPE-FITQGQKQKVCKLNRSIYGLKQESRS
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| A0A5D3BUN8 Gag/pol protein | 1.5e-93 | 92.67 | Show/hide |
Query: MTRRSVRIVSQPNRYLGLTETQVVIPDNGVQDPLSFKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKRIYKRKRDSAGKVQTFKARL
M RRS R+VSQPNRYLGLTETQVVIPD+GV+DPLS+KQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCK IYKRKRDSAGKVQTFKARL
Subjt: MTRRSVRIVSQPNRYLGLTETQVVIPDNGVQDPLSFKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKRIYKRKRDSAGKVQTFKARL
Query: VAKGYTQREGVDYEETFSPVAMLKCIRILLSIATFYDYEIWQMDVKIAFLNGNLEESIFMSKPE-FITQGQKQKVCKLNRSIYGLKQESRS
VAKGYTQREGVDYEETFSPVAMLK IRILLSIATFYDYEIWQMDVK AFLNGNLEESIFMS+PE FITQGQ+QKVCKLN SIYGLKQ SRS
Subjt: VAKGYTQREGVDYEETFSPVAMLKCIRILLSIATFYDYEIWQMDVKIAFLNGNLEESIFMSKPE-FITQGQKQKVCKLNRSIYGLKQESRS
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| A0A5D3CYF4 Gag/pol protein | 2.3e-94 | 93.19 | Show/hide |
Query: MTRRSVRIVSQPNRYLGLTETQVVIPDNGVQDPLSFKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKRIYKRKRDSAGKVQTFKARL
M RRS R+VSQPNRYLGLTETQVVIPD+GV+DPLS+KQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCK IYKRKRDSAGKVQTFKARL
Subjt: MTRRSVRIVSQPNRYLGLTETQVVIPDNGVQDPLSFKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKRIYKRKRDSAGKVQTFKARL
Query: VAKGYTQREGVDYEETFSPVAMLKCIRILLSIATFYDYEIWQMDVKIAFLNGNLEESIFMSKPE-FITQGQKQKVCKLNRSIYGLKQESRS
VAKGYTQREGVDYEETFSPVAMLK IRILLSIATFYDYEIWQMDVK AFLNGNLEESIFMS+PE FITQGQ+QKVCKLNRSIYGLKQ SRS
Subjt: VAKGYTQREGVDYEETFSPVAMLKCIRILLSIATFYDYEIWQMDVKIAFLNGNLEESIFMSKPE-FITQGQKQKVCKLNRSIYGLKQESRS
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| A0A5D3DZX8 Gag/pol protein | 5.7e-93 | 91.62 | Show/hide |
Query: MTRRSVRIVSQPNRYLGLTETQVVIPDNGVQDPLSFKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKRIYKRKRDSAGKVQTFKARL
M RRS R+VSQPNRYLGLTETQVVIPD+GV+DPLS+KQAMNDVDKDQWVKA+DLEMESMYFNSVWELVDLPEGVKPIGCK IYKRKRDSAGKVQTFKARL
Subjt: MTRRSVRIVSQPNRYLGLTETQVVIPDNGVQDPLSFKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKRIYKRKRDSAGKVQTFKARL
Query: VAKGYTQREGVDYEETFSPVAMLKCIRILLSIATFYDYEIWQMDVKIAFLNGNLEESIFMSKPE-FITQGQKQKVCKLNRSIYGLKQESRS
VAKGYTQREGVDYEETFSPVAMLK IRILLSIATFYDYEIWQMDVK AFLNGNLEESIF+S+P+ FITQGQ+QKVCKLNRSIYGLKQ SRS
Subjt: VAKGYTQREGVDYEETFSPVAMLKCIRILLSIATFYDYEIWQMDVKIAFLNGNLEESIFMSKPE-FITQGQKQKVCKLNRSIYGLKQESRS
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 7.3e-29 | 40.76 | Show/hide |
Query: PLSFKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKRIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKCIRILLSI
P SF + DK W +A++ E+ + N+ W + PE + + ++ K + G +KARLVA+G+TQ+ +DYEETF+PVA + R +LS+
Subjt: PLSFKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKRIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKCIRILLSI
Query: ATFYDYEIWQMDVKIAFLNGNLEESIFMSKPEFITQGQKQKVCKLNRSIYGLKQESR
Y+ ++ QMDVK AFLNG L+E I+M P+ I+ VCKLN++IYGLKQ +R
Subjt: ATFYDYEIWQMDVKIAFLNGNLEESIFMSKPEFITQGQKQKVCKLNRSIYGLKQESR
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 7.8e-39 | 45.74 | Show/hide |
Query: RRSVRIVSQPNRYLGLTETQVVIPDNGVQDPLSFKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKRIYKRKRDSAGKVQTFKARLVA
RRS R + RY + V+I D+ ++P S K+ ++ +K+Q +KAM EMES+ N ++LV+LP+G +P+ CK ++K K+D K+ +KARLV
Subjt: RRSVRIVSQPNRYLGLTETQVVIPDNGVQDPLSFKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKRIYKRKRDSAGKVQTFKARLVA
Query: KGYTQREGVDYEETFSPVAMLKCIRILLSIATFYDYEIWQMDVKIAFLNGNLEESIFMSKPE-FITQGQKQKVCKLNRSIYGLKQESR
KG+ Q++G+D++E FSPV + IR +LS+A D E+ Q+DVK AFL+G+LEE I+M +PE F G+K VCKLN+S+YGLKQ R
Subjt: KGYTQREGVDYEETFSPVAMLKCIRILLSIATFYDYEIWQMDVKIAFLNGNLEESIFMSKPE-FITQGQKQKVCKLNRSIYGLKQESR
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| P92520 Uncharacterized mitochondrial protein AtMg00820 | 5.6e-13 | 35.34 | Show/hide |
Query: MTRRSVRIVSQPNRYLGLTETQVVIPDNGVQDPLSFKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKRIYKRKRDSAGKVQTFKARL
M RS +++ N LT T + ++P S A+ D W +AM E++++ N W LV P +GCK ++K K S G + KARL
Subjt: MTRRSVRIVSQPNRYLGLTETQVVIPDNGVQDPLSFKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKRIYKRKRDSAGKVQTFKARL
Query: VAKGYTQREGVDYEETFSPVAMLKCIRILLSIA
VAKG+ Q EG+ + ET+SPV IR +L++A
Subjt: VAKGYTQREGVDYEETFSPVAMLKCIRILLSIA
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 4.7e-28 | 42.86 | Show/hide |
Query: DPLSFKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEG-VKPIGCKRIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKCIRILL
+P + QA+ D ++W AM E+ + N W+LV P V +GC+ I+ +K +S G + +KARLVAKGY QR G+DY ETFSPV IRI+L
Subjt: DPLSFKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEG-VKPIGCKRIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKCIRILL
Query: SIATFYDYEIWQMDVKIAFLNGNLEESIFMSKPE-FITQGQKQKVCKLNRSIYGLKQESRS
+A + I Q+DV AFL G L + ++MS+P FI + + VCKL +++YGLKQ R+
Subjt: SIATFYDYEIWQMDVKIAFLNGNLEESIFMSKPE-FITQGQKQKVCKLNRSIYGLKQESRS
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.2e-28 | 43.48 | Show/hide |
Query: DPLSFKQAMNDVDKDQWVKAMDLEMESMYFNSVWELV-DLPEGVKPIGCKRIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKCIRILL
+P + QAM D D+W +AM E+ + N W+LV P V +GC+ I+ +K +S G + +KARLVAKGY QR G+DY ETFSPV IRI+L
Subjt: DPLSFKQAMNDVDKDQWVKAMDLEMESMYFNSVWELV-DLPEGVKPIGCKRIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKCIRILL
Query: SIATFYDYEIWQMDVKIAFLNGNLEESIFMSKPE-FITQGQKQKVCKLNRSIYGLKQESRS
+A + I Q+DV AFL G L + ++MS+P F+ + + VC+L ++IYGLKQ R+
Subjt: SIATFYDYEIWQMDVKIAFLNGNLEESIFMSKPE-FITQGQKQKVCKLNRSIYGLKQESRS
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