| GenBank top hits | e value | %identity | Alignment |
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| KAA0025945.1 gag/pol protein [Cucumis melo var. makuwa] | 1.1e-98 | 92.42 | Show/hide |
Query: MFLENLYIVPKIKSNLVSVSCLIEHMYSINFSMNEAFISKNGVHIFSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRFSKNNNTYLWHLRIGHIN
MFLENLYIVPKIK NLVSVSCLIEHMYSINFSMNEAFI KNGVHI SAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQR S NNNTYLWHLR+GHIN
Subjt: MFLENLYIVPKIKSNLVSVSCLIEHMYSINFSMNEAFISKNGVHIFSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRFSKNNNTYLWHLRIGHIN
Query: LDRIGRLEKNGLLKNLEDDSLPPCESSLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGDFKYFISFIDDYSKYGYLYLMEHKSEALEKFKE
LDRIGRL KNGLL L+D SLPPCES LEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARG F+YFISFIDDYS+YGYLYLMEHKSEALEKFKE
Subjt: LDRIGRLEKNGLLKNLEDDSLPPCESSLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGDFKYFISFIDDYSKYGYLYLMEHKSEALEKFKE
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| KAA0035907.1 gag/pol protein [Cucumis melo var. makuwa] | 3.3e-98 | 91.92 | Show/hide |
Query: MFLENLYIVPKIKSNLVSVSCLIEHMYSINFSMNEAFISKNGVHIFSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRFSKNNNTYLWHLRIGHIN
MFLENLYIVPKIK NLVSVSCLIEHMYSINFSMNEAFI KNGVHI SAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQR S NNNTYLWHLR+GHIN
Subjt: MFLENLYIVPKIKSNLVSVSCLIEHMYSINFSMNEAFISKNGVHIFSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRFSKNNNTYLWHLRIGHIN
Query: LDRIGRLEKNGLLKNLEDDSLPPCESSLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGDFKYFISFIDDYSKYGYLYLMEHKSEALEKFKE
LDRIGRL K+GLL L+D SLPPCES LEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARG F+YFISFIDDYS+YGYLYLMEHKSEALEKFKE
Subjt: LDRIGRLEKNGLLKNLEDDSLPPCESSLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGDFKYFISFIDDYSKYGYLYLMEHKSEALEKFKE
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| KAA0046415.1 gag/pol protein [Cucumis melo var. makuwa] | 3.6e-76 | 71.72 | Show/hide |
Query: MFLENLYIVPKIKSNLVSVSCLIEHMYSINFSMNEAFISKNGVHIFSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRFSKNNNTYLWHLRIGHIN
+ LEN+Y+VP +K NL+SV CL+E YS+ F++N+ FI KNGV I SAKLENNLYVLR +KA+LN EMF+TA TQNKR + S N +LWHLR+GHIN
Subjt: MFLENLYIVPKIKSNLVSVSCLIEHMYSINFSMNEAFISKNGVHIFSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRFSKNNNTYLWHLRIGHIN
Query: LDRIGRLEKNGLLKNLEDDSLPPCESSLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGDFKYFISFIDDYSKYGYLYLMEHKSEALEKFKE
L+RI RL KNGLL LE++SLP CES LEGKMTKRPFTGKG+RAKEPLEL+HSDLCGPMNVKARG F+YFI+F DDYS+YGY+YLM+HKSEALEKFKE
Subjt: LDRIGRLEKNGLLKNLEDDSLPPCESSLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGDFKYFISFIDDYSKYGYLYLMEHKSEALEKFKE
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| KAA0060534.1 gag/pol protein [Cucumis melo var. makuwa] | 8.2e-97 | 90.4 | Show/hide |
Query: MFLENLYIVPKIKSNLVSVSCLIEHMYSINFSMNEAFISKNGVHIFSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRFSKNNNTYLWHLRIGHIN
MFLENLYIVPKIK NLVSVSCLIEHMYSI+FSMNEAFISKNGVHI S KLE+NLYVL+PNE KAVLNHEMFRTANTQNKRQR S NNNTYLWHLR+GHIN
Subjt: MFLENLYIVPKIKSNLVSVSCLIEHMYSINFSMNEAFISKNGVHIFSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRFSKNNNTYLWHLRIGHIN
Query: LDRIGRLEKNGLLKNLEDDSLPPCESSLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGDFKYFISFIDDYSKYGYLYLMEHKSEALEKFKE
LDRIGRL KNGLL LEDDSLPPCES LEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKA G F+YFISFIDDYS YGYLYL+EHKSEALEKFKE
Subjt: LDRIGRLEKNGLLKNLEDDSLPPCESSLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGDFKYFISFIDDYSKYGYLYLMEHKSEALEKFKE
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| KAA0067938.1 gag/pol protein [Cucumis melo var. makuwa] | 5.5e-93 | 88.89 | Show/hide |
Query: MFLENLYIVPKIKSNLVSVSCLIEHMYSINFSMNEAFISKNGVHIFSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRFSKNNNTYLWHLRIGHIN
MFLENLYIVPKIK NLV VSCLIEHMYSINFSMNEAFISKNG AKLE+NLYVLRPNEAKAVLNHEMFRTANTQNKRQR S NNNTYLWHLR+ HIN
Subjt: MFLENLYIVPKIKSNLVSVSCLIEHMYSINFSMNEAFISKNGVHIFSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRFSKNNNTYLWHLRIGHIN
Query: LDRIGRLEKNGLLKNLEDDSLPPCESSLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGDFKYFISFIDDYSKYGYLYLMEHKSEALEKFKE
LDRIGRL KNGLL L+DDSLPPCES LEGKMTKRPFTGK YRAKEPLELIHSDLCGPMNVKARG F+YFISFIDDYS+YGYLYLMEHK EALEKFKE
Subjt: LDRIGRLEKNGLLKNLEDDSLPPCESSLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGDFKYFISFIDDYSKYGYLYLMEHKSEALEKFKE
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SMH8 Gag/pol protein | 1.7e-76 | 71.72 | Show/hide |
Query: MFLENLYIVPKIKSNLVSVSCLIEHMYSINFSMNEAFISKNGVHIFSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRFSKNNNTYLWHLRIGHIN
+ LEN+Y+VP +K NL+SV CL+E YS+ F++N+ FI KNGV I SAKLENNLYVLR +KA+LN EMF+TA TQNKR + S N +LWHLR+GHIN
Subjt: MFLENLYIVPKIKSNLVSVSCLIEHMYSINFSMNEAFISKNGVHIFSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRFSKNNNTYLWHLRIGHIN
Query: LDRIGRLEKNGLLKNLEDDSLPPCESSLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGDFKYFISFIDDYSKYGYLYLMEHKSEALEKFKE
L+RI RL KNGLL LE++SLP CES LEGKMTKRPFTGKG+RAKEPLEL+HSDLCGPMNVKARG F+YFI+F DDYS+YGY+YLM+HKSEALEKFKE
Subjt: LDRIGRLEKNGLLKNLEDDSLPPCESSLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGDFKYFISFIDDYSKYGYLYLMEHKSEALEKFKE
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| A0A5A7T2V9 Gag/pol protein | 1.6e-98 | 91.92 | Show/hide |
Query: MFLENLYIVPKIKSNLVSVSCLIEHMYSINFSMNEAFISKNGVHIFSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRFSKNNNTYLWHLRIGHIN
MFLENLYIVPKIK NLVSVSCLIEHMYSINFSMNEAFI KNGVHI SAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQR S NNNTYLWHLR+GHIN
Subjt: MFLENLYIVPKIKSNLVSVSCLIEHMYSINFSMNEAFISKNGVHIFSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRFSKNNNTYLWHLRIGHIN
Query: LDRIGRLEKNGLLKNLEDDSLPPCESSLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGDFKYFISFIDDYSKYGYLYLMEHKSEALEKFKE
LDRIGRL K+GLL L+D SLPPCES LEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARG F+YFISFIDDYS+YGYLYLMEHKSEALEKFKE
Subjt: LDRIGRLEKNGLLKNLEDDSLPPCESSLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGDFKYFISFIDDYSKYGYLYLMEHKSEALEKFKE
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| A0A5A7TZD0 Gag/pol protein | 5.5e-99 | 92.42 | Show/hide |
Query: MFLENLYIVPKIKSNLVSVSCLIEHMYSINFSMNEAFISKNGVHIFSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRFSKNNNTYLWHLRIGHIN
MFLENLYIVPKIK NLVSVSCLIEHMYSINFSMNEAFI KNGVHI SAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQR S NNNTYLWHLR+GHIN
Subjt: MFLENLYIVPKIKSNLVSVSCLIEHMYSINFSMNEAFISKNGVHIFSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRFSKNNNTYLWHLRIGHIN
Query: LDRIGRLEKNGLLKNLEDDSLPPCESSLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGDFKYFISFIDDYSKYGYLYLMEHKSEALEKFKE
LDRIGRL KNGLL L+D SLPPCES LEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARG F+YFISFIDDYS+YGYLYLMEHKSEALEKFKE
Subjt: LDRIGRLEKNGLLKNLEDDSLPPCESSLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGDFKYFISFIDDYSKYGYLYLMEHKSEALEKFKE
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| A0A5A7VJG3 Gag/pol protein | 2.7e-93 | 88.89 | Show/hide |
Query: MFLENLYIVPKIKSNLVSVSCLIEHMYSINFSMNEAFISKNGVHIFSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRFSKNNNTYLWHLRIGHIN
MFLENLYIVPKIK NLV VSCLIEHMYSINFSMNEAFISKNG AKLE+NLYVLRPNEAKAVLNHEMFRTANTQNKRQR S NNNTYLWHLR+ HIN
Subjt: MFLENLYIVPKIKSNLVSVSCLIEHMYSINFSMNEAFISKNGVHIFSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRFSKNNNTYLWHLRIGHIN
Query: LDRIGRLEKNGLLKNLEDDSLPPCESSLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGDFKYFISFIDDYSKYGYLYLMEHKSEALEKFKE
LDRIGRL KNGLL L+DDSLPPCES LEGKMTKRPFTGK YRAKEPLELIHSDLCGPMNVKARG F+YFISFIDDYS+YGYLYLMEHK EALEKFKE
Subjt: LDRIGRLEKNGLLKNLEDDSLPPCESSLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGDFKYFISFIDDYSKYGYLYLMEHKSEALEKFKE
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| A0A5D3BNE1 Gag/pol protein | 4.0e-97 | 90.4 | Show/hide |
Query: MFLENLYIVPKIKSNLVSVSCLIEHMYSINFSMNEAFISKNGVHIFSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRFSKNNNTYLWHLRIGHIN
MFLENLYIVPKIK NLVSVSCLIEHMYSI+FSMNEAFISKNGVHI S KLE+NLYVL+PNE KAVLNHEMFRTANTQNKRQR S NNNTYLWHLR+GHIN
Subjt: MFLENLYIVPKIKSNLVSVSCLIEHMYSINFSMNEAFISKNGVHIFSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRFSKNNNTYLWHLRIGHIN
Query: LDRIGRLEKNGLLKNLEDDSLPPCESSLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGDFKYFISFIDDYSKYGYLYLMEHKSEALEKFKE
LDRIGRL KNGLL LEDDSLPPCES LEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKA G F+YFISFIDDYS YGYLYL+EHKSEALEKFKE
Subjt: LDRIGRLEKNGLLKNLEDDSLPPCESSLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGDFKYFISFIDDYSKYGYLYLMEHKSEALEKFKE
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 4.3e-16 | 31.71 | Show/hide |
Query: LENLYIVPKIKSNLVSVSCLIEHMYSINFSMNEAFISKNGVHIF-SAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRFSKNNNTYLWHLRIGHIN-
LE++ + NL+SV L E SI F + ISKNG+ + ++ + NN+ V+N + + + N ++K NN LWH R GHI+
Subjt: LENLYIVPKIKSNLVSVSCLIEHMYSINFSMNEAFISKNGVHIF-SAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRFSKNNNTYLWHLRIGHIN-
Query: -----LDRIGRLEKNGLLKNLEDDSLPPCESSLEGKMTKRPFTGKGYRA--KEPLELIHSDLCGPMNVKARGDFKYFISFIDDYSKYGYLYLMEHKSEAL
+ R LL NLE S CE L GK + PF + K PL ++HSD+CGP+ D YF+ F+D ++ Y YL+++KS+
Subjt: -----LDRIGRLEKNGLLKNLEDDSLPPCESSLEGKMTKRPFTGKGYRA--KEPLELIHSDLCGPMNVKARGDFKYFISFIDDYSKYGYLYLMEHKSEAL
Query: EKFKE
F++
Subjt: EKFKE
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.8e-14 | 26.5 | Show/hide |
Query: MFLENLYIVPKIKSNLVSVSCLIEHMYSINFSMNEAFISKNGVHIFSAKLENNLYVLRPNEAKAVLNHEMFRT--ANTQNKRQRFSKNNNTYLWHLRIGH
+ L+++ VP ++ NL+S L Y F+ + ++K + I AK V ++RT Q + + LWH R+GH
Subjt: MFLENLYIVPKIKSNLVSVSCLIEHMYSINFSMNEAFISKNGVHIFSAKLENNLYVLRPNEAKAVLNHEMFRT--ANTQNKRQRFSKNNNTYLWHLRIGH
Query: INLDRIGRLEKNGLLKNLEDDSLPPCESSLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGDFKYFISFIDDYSKYGYLYLMEHKSEALEKFKE
++ + L K L+ + ++ PC+ L GK + F R L+L++SD+CGPM +++ G KYF++FIDD S+ ++Y+++ K + + F++
Subjt: INLDRIGRLEKNGLLKNLEDDSLPPCESSLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGDFKYFISFIDDYSKYGYLYLMEHKSEALEKFKE
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| P25384 Transposon Ty2-C Gag-Pol polyprotein | 6.9e-06 | 28.43 | Show/hide |
Query: PKIKSNLVSVSCLIEHMYSINFSMNEAFISKNGVHIFSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRFSKNNNTY---LWHLRIGHINLDRIGR
P I +L+S+S L + F+ N +G + + Y L ++ + +H T N NK SK+ N Y L H +GH N I +
Subjt: PKIKSNLVSVSCLIEHMYSINFSMNEAFISKNGVHIFSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRFSKNNNTY---LWHLRIGHINLDRIGR
Query: -LEKNGLLKNLEDD------SLPPCESSLEGKMTKRPFTGKGYRAK-----EPLELIHSDLCGPMNVKARGDFKYFISFIDDYSKYGYLYLMEHKSE
L+KN + E D S C L GK TK KG R K EP + +H+D+ GP++ + YFISF D+ +++ ++Y + + E
Subjt: -LEKNGLLKNLEDD------SLPPCESSLEGKMTKRPFTGKGYRAK-----EPLELIHSDLCGPMNVKARGDFKYFISFIDDYSKYGYLYLMEHKSE
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| Q12491 Transposon Ty2-B Gag-Pol polyprotein | 6.9e-06 | 28.43 | Show/hide |
Query: PKIKSNLVSVSCLIEHMYSINFSMNEAFISKNGVHIFSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRFSKNNNTY---LWHLRIGHINLDRIGR
P I +L+S+S L + F+ N +G + + Y L ++ + +H T N NK SK+ N Y L H +GH N I +
Subjt: PKIKSNLVSVSCLIEHMYSINFSMNEAFISKNGVHIFSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRFSKNNNTY---LWHLRIGHINLDRIGR
Query: -LEKNGLLKNLEDD------SLPPCESSLEGKMTKRPFTGKGYRAK-----EPLELIHSDLCGPMNVKARGDFKYFISFIDDYSKYGYLYLMEHKSE
L+KN + E D S C L GK TK KG R K EP + +H+D+ GP++ + YFISF D+ +++ ++Y + + E
Subjt: -LEKNGLLKNLEDD------SLPPCESSLEGKMTKRPFTGKGYRAK-----EPLELIHSDLCGPMNVKARGDFKYFISFIDDYSKYGYLYLMEHKSE
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 7.4e-08 | 24.88 | Show/hide |
Query: LENLYIVPKIKSNLVSVSCLIE------HMYSINFSMNEAFISKNGVHIFSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRFSKNNNTYLWHLRI
L N+ VP I NL+SV L + +F + + GV + K ++ LY E + + A+ +K S WH R+
Subjt: LENLYIVPKIKSNLVSVSCLIE------HMYSINFSMNEAFISKNGVHIFSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRFSKNNNTYLWHLRI
Query: GHINLDRIGRLEKNGLLKNLE-DDSLPPCESSLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGDFKYFISFIDDYSKYGYLYLMEHKSEALEK
GH + + N L L C L K K PF+ + PLE I+SD+ + + +++Y++ F+D +++Y +LY ++ KS+ E
Subjt: GHINLDRIGRLEKNGLLKNLE-DDSLPPCESSLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGDFKYFISFIDDYSKYGYLYLMEHKSEALEK
Query: F
F
Subjt: F
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