| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0025945.1 gag/pol protein [Cucumis melo var. makuwa] | 8.4e-235 | 94.56 | Show/hide |
Query: MDSLREMFGQPSIQIKQEANVAHSK-RFAPSSSGSEKIQKRKEGKGKCPTIAVEGKGKAKVVIKEKCFHCNVDEHWKTNCPKYLVKKKENEGKYDLLVLE
MDSLREMFGQPSIQIKQEANVAHSK RF PS SGSEKIQKRKEGKGK PTIAVE KGKAKV IK KCFHCNVDEHWKTNCPKYLVKKKE EGKYDLLVLE
Subjt: MDSLREMFGQPSIQIKQEANVAHSK-RFAPSSSGSEKIQKRKEGKGKCPTIAVEGKGKAKVVIKEKCFHCNVDEHWKTNCPKYLVKKKENEGKYDLLVLE
Query: TCLVENDQNAWILDSGATNHVCSSLQETSSFKQLEESEMTLKVGTGDVISARAVGDAKLFFENKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNE
TCLVENDQNAWILDSGATNHVCSSLQETSSFKQLE+SEMTLKVGTGDVISARAVGDAKLFF NKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNE
Subjt: TCLVENDQNAWILDSGATNHVCSSLQETSSFKQLEESEMTLKVGTGDVISARAVGDAKLFFENKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNE
Query: AFISKNGVHICSAKLEDNLYVLRPNEAKAVLNHEMFRTANTQNKKQRISPNNNTYLCHLRLGHINLDQIGRLVKNVLLNKLEDDSLPPCESCLEGKMTKR
AFI KNGVHICSAKLE+NLYVLRPNEAKAVLNHEMFRTANTQNK+QRISPNNNTYL HLRLGHINLD+IGRLVKN LLNKL+D SLPPCESCLEGKMTKR
Subjt: AFISKNGVHICSAKLEDNLYVLRPNEAKAVLNHEMFRTANTQNKKQRISPNNNTYLCHLRLGHINLDQIGRLVKNVLLNKLEDDSLPPCESCLEGKMTKR
Query: PFTRNGYRAKEPLELIHSDLCGPMNVKARGGFIYFISFIDDCSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQNYMIEHG
PFT GYRAKEPLELIHSDLCGPMNVKARGGF YFISFIDD SRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQ+YMIEHG
Subjt: PFTRNGYRAKEPLELIHSDLCGPMNVKARGGFIYFISFIDDCSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQNYMIEHG
Query: IQSQLSAPCTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSF
IQSQLSAP TPQQNGVSERRNRTLLDMVRSMMSYAQLPSSF
Subjt: IQSQLSAPCTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSF
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| KAA0035907.1 gag/pol protein [Cucumis melo var. makuwa] | 7.4e-231 | 93.2 | Show/hide |
Query: MDSLREMFGQPSIQIKQEANVAHSK-RFAPSSSGSEKIQKRKEGKGKCPTIAVEGKGKAKVVIKEKCFHCNVDEHWKTNCPKYLVKKKENEGKYDLLVLE
MDSLREMFGQPSIQIKQEANVAHSK RF PS SGSEKIQKRKEGKGK PTIAVE KGKAKV IK KCFHCNVDEHWKTNCPKYLVKK E E KYDLLVLE
Subjt: MDSLREMFGQPSIQIKQEANVAHSK-RFAPSSSGSEKIQKRKEGKGKCPTIAVEGKGKAKVVIKEKCFHCNVDEHWKTNCPKYLVKKKENEGKYDLLVLE
Query: TCLVENDQNAWILDSGATNHVCSSLQETSSFKQLEESEMTLKVGTGDVISARAVGDAKLFFENKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNE
TCLVENDQNAWILDSGATNHVCSSLQETSSFKQLE+SEMTLKVGTGDVISARAVGDAKLFF NKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNE
Subjt: TCLVENDQNAWILDSGATNHVCSSLQETSSFKQLEESEMTLKVGTGDVISARAVGDAKLFFENKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNE
Query: AFISKNGVHICSAKLEDNLYVLRPNEAKAVLNHEMFRTANTQNKKQRISPNNNTYLCHLRLGHINLDQIGRLVKNVLLNKLEDDSLPPCESCLEGKMTKR
AFI KNGVHICSAKLE+NLYVLRPNEAKAVLNHEMFRTANTQNK+QRISPNNNTYL HLRLGHINLD+IGRLVK+ LLNKL+D SLPPCESCLEGKMTKR
Subjt: AFISKNGVHICSAKLEDNLYVLRPNEAKAVLNHEMFRTANTQNKKQRISPNNNTYLCHLRLGHINLDQIGRLVKNVLLNKLEDDSLPPCESCLEGKMTKR
Query: PFTRNGYRAKEPLELIHSDLCGPMNVKARGGFIYFISFIDDCSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQNYMIEHG
PFT GYRAKEPLELIHSDLCGPMNVKARG F YFISFIDD SRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKI RSDRGGEYMDL FQ+YMIEHG
Subjt: PFTRNGYRAKEPLELIHSDLCGPMNVKARGGFIYFISFIDDCSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQNYMIEHG
Query: IQSQLSAPCTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSF
IQSQLSAP TPQQNGVSERRNRTLLDMVRSMMSYAQLPSSF
Subjt: IQSQLSAPCTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSF
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| KAA0046415.1 gag/pol protein [Cucumis melo var. makuwa] | 1.9e-162 | 66.96 | Show/hide |
Query: DSLREMFGQPSIQIKQEANVAHSKR-----------FAPSSSGSEKIQKRKEGKGKCPTIAVEGKGKAKVVIKEKCFHCNVDEHWKTNCPKYLV-KKKEN
+SL ++ GQ K EANVA S R PSSSG++K +K+K G+G +A K K CFHCN + HWK NCPKYL KKK
Subjt: DSLREMFGQPSIQIKQEANVAHSKR-----------FAPSSSGSEKIQKRKEGKGKCPTIAVEGKGKAKVVIKEKCFHCNVDEHWKTNCPKYLV-KKKEN
Query: EGKYDLLVLETCLVENDQNAWILDSGATNHVCSSLQETSSFKQLEESEMTLKVGTGDVISARAVGDAKLFFENKFMFLENLYIVPKIKRNLVSVSCLIEH
+GKYDLLVLETCLVEND +AWI+DSGATNHVCSS Q SS++QLE EMT++VGTG VISA AVG +L + F+ LEN+Y+VP +KRNL+SV CL+E
Subjt: EGKYDLLVLETCLVENDQNAWILDSGATNHVCSSLQETSSFKQLEESEMTLKVGTGDVISARAVGDAKLFFENKFMFLENLYIVPKIKRNLVSVSCLIEH
Query: MYSINFSMNEAFISKNGVHICSAKLEDNLYVLRPNEAKAVLNHEMFRTANTQNKKQRISPNNNTYLCHLRLGHINLDQIGRLVKNVLLNKLEDDSLPPCE
YS+ F++N+ FI KNGV ICSAKLE+NLYVLR +KA+LN EMF+TA TQNK+ +ISP N +L HLRLGHINL++I RLVKN LL++LE++SLP CE
Subjt: MYSINFSMNEAFISKNGVHICSAKLEDNLYVLRPNEAKAVLNHEMFRTANTQNKKQRISPNNNTYLCHLRLGHINLDQIGRLVKNVLLNKLEDDSLPPCE
Query: SCLEGKMTKRPFTRNGYRAKEPLELIHSDLCGPMNVKARGGFIYFISFIDDCSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDL
SCLEGKMTKRPFT G+RAKEPLEL+HSDLCGPMNVKARGGF YFI+F DD SRYGY+YLM+HKSEALEKFKEYK EVEN LSK IK RSDRGGEYMDL
Subjt: SCLEGKMTKRPFTRNGYRAKEPLELIHSDLCGPMNVKARGGFIYFISFIDDCSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDL
Query: RFQNYMIEHGIQSQLSAPCTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSF
+FQNY++E GI SQLSAP TPQQNGVSERRNRTLLDMVRSMMSYA LP+SF
Subjt: RFQNYMIEHGIQSQLSAPCTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSF
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| KAA0060534.1 gag/pol protein [Cucumis melo var. makuwa] | 7.4e-231 | 92.95 | Show/hide |
Query: MDSLREMFGQPSIQIKQEANVAHSKRFAPSSSGSEKIQKRKEGKGKCPTIAVEGKGKAKVVIKEKCFHCNVDEHWKTNCPKYLVKKKENEGKYDLLVLET
MDSLREMFGQPSIQIKQE NVAHSKRFA SS GSEKIQKRKEGKGK PTIA+EGKGK KVVIKEK FHCNV+EHWKTNCPKYLVKKKE EGKYDLLVLET
Subjt: MDSLREMFGQPSIQIKQEANVAHSKRFAPSSSGSEKIQKRKEGKGKCPTIAVEGKGKAKVVIKEKCFHCNVDEHWKTNCPKYLVKKKENEGKYDLLVLET
Query: CLVENDQNAWILDSGATNHVCSSLQETSSFKQLEESEMTLKVGTGDVISARAVGDAKLFFENKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNEA
CLVENDQNAWILDSGATNHVCSSLQETSSFKQLEESEM LKVGTGDVISARAVGDAKLFF NKFMFLENLYIVPKIKRNLVSVSCLIEHMYSI+FSMNEA
Subjt: CLVENDQNAWILDSGATNHVCSSLQETSSFKQLEESEMTLKVGTGDVISARAVGDAKLFFENKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNEA
Query: FISKNGVHICSAKLEDNLYVLRPNEAKAVLNHEMFRTANTQNKKQRISPNNNTYLCHLRLGHINLDQIGRLVKNVLLNKLEDDSLPPCESCLEGKMTKRP
FISKNGVHICS KLEDNLYVL+PNE KAVLNHEMFRTANTQNK+QRIS NNNTYL HLRLGHINLD+IGRLVKN LLNKLEDDSLPPCESCLEGKMTKRP
Subjt: FISKNGVHICSAKLEDNLYVLRPNEAKAVLNHEMFRTANTQNKKQRISPNNNTYLCHLRLGHINLDQIGRLVKNVLLNKLEDDSLPPCESCLEGKMTKRP
Query: FTRNGYRAKEPLELIHSDLCGPMNVKARGGFIYFISFIDDCSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQNYMIEHGI
FT GYRAKEPLELIHSDLCGPMNVKA GGF YFISFIDD S YGYLYL+EHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQ+YMIEHGI
Subjt: FTRNGYRAKEPLELIHSDLCGPMNVKARGGFIYFISFIDDCSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQNYMIEHGI
Query: QSQLSAPCTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSF
QSQLSAP TPQQNGVSERRNRTLLDMV SMMSY QLPSSF
Subjt: QSQLSAPCTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSF
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| KAA0067938.1 gag/pol protein [Cucumis melo var. makuwa] | 2.9e-211 | 88.18 | Show/hide |
Query: MDSLREMFGQPSIQIKQEANVAHSKRFAPSSSGSEKIQKRKEGKGKCPTIAVEGKGKAKVVIKEKCFHCNVDEHWKTNCPKYLVKKKENEGKYDLLVLET
MDSLREMFGQPSIQIKQEANVAHSKRFAPSSSGSEKIQKRKEGKG+ PTIAVEGKGKAKVVIK KCFHCNVDEHWKTNCPKYLVKKKE E
Subjt: MDSLREMFGQPSIQIKQEANVAHSKRFAPSSSGSEKIQKRKEGKGKCPTIAVEGKGKAKVVIKEKCFHCNVDEHWKTNCPKYLVKKKENEGKYDLLVLET
Query: CLVENDQNAWILDSGATNHVCSSLQETSSFKQLEESEMTLKVGTGDVISARAVGDAKLFFENKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNEA
GATNHVCSSLQETSSFKQLEESEMTL VGTGDVISARAVGD KLFF KFMFLENLYIVPKIKRNLV VSCLIEHMYSINFSMNEA
Subjt: CLVENDQNAWILDSGATNHVCSSLQETSSFKQLEESEMTLKVGTGDVISARAVGDAKLFFENKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNEA
Query: FISKNGVHICSAKLEDNLYVLRPNEAKAVLNHEMFRTANTQNKKQRISPNNNTYLCHLRLGHINLDQIGRLVKNVLLNKLEDDSLPPCESCLEGKMTKRP
FISKNG AKLEDNLYVLRPNEAKAVLNHEMFRTANTQNK+QRISPNNNTYL HLRL HINLD+IGRLVKN LLNKL+DDSLPPCESCLEGKMTKRP
Subjt: FISKNGVHICSAKLEDNLYVLRPNEAKAVLNHEMFRTANTQNKKQRISPNNNTYLCHLRLGHINLDQIGRLVKNVLLNKLEDDSLPPCESCLEGKMTKRP
Query: FTRNGYRAKEPLELIHSDLCGPMNVKARGGFIYFISFIDDCSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQNYMIEHGI
FT YRAKEPLELIHSDLCGPMNVKARGGF YFISFIDD SRYGYLYLMEHK EALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQ+YMIEHGI
Subjt: FTRNGYRAKEPLELIHSDLCGPMNVKARGGFIYFISFIDDCSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQNYMIEHGI
Query: QSQLSAPCTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSF
QSQLSAP TPQQNGVSERRNRTLLDMVRSMMSYAQLPSSF
Subjt: QSQLSAPCTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSF
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7T2V9 Gag/pol protein | 3.6e-231 | 93.2 | Show/hide |
Query: MDSLREMFGQPSIQIKQEANVAHSK-RFAPSSSGSEKIQKRKEGKGKCPTIAVEGKGKAKVVIKEKCFHCNVDEHWKTNCPKYLVKKKENEGKYDLLVLE
MDSLREMFGQPSIQIKQEANVAHSK RF PS SGSEKIQKRKEGKGK PTIAVE KGKAKV IK KCFHCNVDEHWKTNCPKYLVKK E E KYDLLVLE
Subjt: MDSLREMFGQPSIQIKQEANVAHSK-RFAPSSSGSEKIQKRKEGKGKCPTIAVEGKGKAKVVIKEKCFHCNVDEHWKTNCPKYLVKKKENEGKYDLLVLE
Query: TCLVENDQNAWILDSGATNHVCSSLQETSSFKQLEESEMTLKVGTGDVISARAVGDAKLFFENKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNE
TCLVENDQNAWILDSGATNHVCSSLQETSSFKQLE+SEMTLKVGTGDVISARAVGDAKLFF NKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNE
Subjt: TCLVENDQNAWILDSGATNHVCSSLQETSSFKQLEESEMTLKVGTGDVISARAVGDAKLFFENKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNE
Query: AFISKNGVHICSAKLEDNLYVLRPNEAKAVLNHEMFRTANTQNKKQRISPNNNTYLCHLRLGHINLDQIGRLVKNVLLNKLEDDSLPPCESCLEGKMTKR
AFI KNGVHICSAKLE+NLYVLRPNEAKAVLNHEMFRTANTQNK+QRISPNNNTYL HLRLGHINLD+IGRLVK+ LLNKL+D SLPPCESCLEGKMTKR
Subjt: AFISKNGVHICSAKLEDNLYVLRPNEAKAVLNHEMFRTANTQNKKQRISPNNNTYLCHLRLGHINLDQIGRLVKNVLLNKLEDDSLPPCESCLEGKMTKR
Query: PFTRNGYRAKEPLELIHSDLCGPMNVKARGGFIYFISFIDDCSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQNYMIEHG
PFT GYRAKEPLELIHSDLCGPMNVKARG F YFISFIDD SRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKI RSDRGGEYMDL FQ+YMIEHG
Subjt: PFTRNGYRAKEPLELIHSDLCGPMNVKARGGFIYFISFIDDCSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQNYMIEHG
Query: IQSQLSAPCTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSF
IQSQLSAP TPQQNGVSERRNRTLLDMVRSMMSYAQLPSSF
Subjt: IQSQLSAPCTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSF
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| A0A5A7TYF5 Gag/pol protein | 9.2e-163 | 66.96 | Show/hide |
Query: DSLREMFGQPSIQIKQEANVAHSKR-----------FAPSSSGSEKIQKRKEGKGKCPTIAVEGKGKAKVVIKEKCFHCNVDEHWKTNCPKYLV-KKKEN
+SL ++ GQ K EANVA S R PSSSG++K +K+K G+G +A K K CFHCN + HWK NCPKYL KKK
Subjt: DSLREMFGQPSIQIKQEANVAHSKR-----------FAPSSSGSEKIQKRKEGKGKCPTIAVEGKGKAKVVIKEKCFHCNVDEHWKTNCPKYLV-KKKEN
Query: EGKYDLLVLETCLVENDQNAWILDSGATNHVCSSLQETSSFKQLEESEMTLKVGTGDVISARAVGDAKLFFENKFMFLENLYIVPKIKRNLVSVSCLIEH
+GKYDLLVLETCLVEND +AWI+DSGATNHVCSS Q SS++QLE EMT++VGTG VISA AVG +L + F+ LEN+Y+VP +KRNL+SV CL+E
Subjt: EGKYDLLVLETCLVENDQNAWILDSGATNHVCSSLQETSSFKQLEESEMTLKVGTGDVISARAVGDAKLFFENKFMFLENLYIVPKIKRNLVSVSCLIEH
Query: MYSINFSMNEAFISKNGVHICSAKLEDNLYVLRPNEAKAVLNHEMFRTANTQNKKQRISPNNNTYLCHLRLGHINLDQIGRLVKNVLLNKLEDDSLPPCE
YS+ F++N+ FI KNGV ICSAKLE+NLYVLR +KA+LN EMF+TA TQNK+ +ISP N +L HLRLGHINL++I RLVKN LL++LE++SLP CE
Subjt: MYSINFSMNEAFISKNGVHICSAKLEDNLYVLRPNEAKAVLNHEMFRTANTQNKKQRISPNNNTYLCHLRLGHINLDQIGRLVKNVLLNKLEDDSLPPCE
Query: SCLEGKMTKRPFTRNGYRAKEPLELIHSDLCGPMNVKARGGFIYFISFIDDCSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDL
SCLEGKMTKRPFT G+RAKEPLEL+HSDLCGPMNVKARGGF YFI+F DD SRYGY+YLM+HKSEALEKFKEYK EVEN LSK IK RSDRGGEYMDL
Subjt: SCLEGKMTKRPFTRNGYRAKEPLELIHSDLCGPMNVKARGGFIYFISFIDDCSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDL
Query: RFQNYMIEHGIQSQLSAPCTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSF
+FQNY++E GI SQLSAP TPQQNGVSERRNRTLLDMVRSMMSYA LP+SF
Subjt: RFQNYMIEHGIQSQLSAPCTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSF
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| A0A5A7TZD0 Gag/pol protein | 4.1e-235 | 94.56 | Show/hide |
Query: MDSLREMFGQPSIQIKQEANVAHSK-RFAPSSSGSEKIQKRKEGKGKCPTIAVEGKGKAKVVIKEKCFHCNVDEHWKTNCPKYLVKKKENEGKYDLLVLE
MDSLREMFGQPSIQIKQEANVAHSK RF PS SGSEKIQKRKEGKGK PTIAVE KGKAKV IK KCFHCNVDEHWKTNCPKYLVKKKE EGKYDLLVLE
Subjt: MDSLREMFGQPSIQIKQEANVAHSK-RFAPSSSGSEKIQKRKEGKGKCPTIAVEGKGKAKVVIKEKCFHCNVDEHWKTNCPKYLVKKKENEGKYDLLVLE
Query: TCLVENDQNAWILDSGATNHVCSSLQETSSFKQLEESEMTLKVGTGDVISARAVGDAKLFFENKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNE
TCLVENDQNAWILDSGATNHVCSSLQETSSFKQLE+SEMTLKVGTGDVISARAVGDAKLFF NKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNE
Subjt: TCLVENDQNAWILDSGATNHVCSSLQETSSFKQLEESEMTLKVGTGDVISARAVGDAKLFFENKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNE
Query: AFISKNGVHICSAKLEDNLYVLRPNEAKAVLNHEMFRTANTQNKKQRISPNNNTYLCHLRLGHINLDQIGRLVKNVLLNKLEDDSLPPCESCLEGKMTKR
AFI KNGVHICSAKLE+NLYVLRPNEAKAVLNHEMFRTANTQNK+QRISPNNNTYL HLRLGHINLD+IGRLVKN LLNKL+D SLPPCESCLEGKMTKR
Subjt: AFISKNGVHICSAKLEDNLYVLRPNEAKAVLNHEMFRTANTQNKKQRISPNNNTYLCHLRLGHINLDQIGRLVKNVLLNKLEDDSLPPCESCLEGKMTKR
Query: PFTRNGYRAKEPLELIHSDLCGPMNVKARGGFIYFISFIDDCSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQNYMIEHG
PFT GYRAKEPLELIHSDLCGPMNVKARGGF YFISFIDD SRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQ+YMIEHG
Subjt: PFTRNGYRAKEPLELIHSDLCGPMNVKARGGFIYFISFIDDCSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQNYMIEHG
Query: IQSQLSAPCTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSF
IQSQLSAP TPQQNGVSERRNRTLLDMVRSMMSYAQLPSSF
Subjt: IQSQLSAPCTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSF
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| A0A5A7VJG3 Gag/pol protein | 1.4e-211 | 88.18 | Show/hide |
Query: MDSLREMFGQPSIQIKQEANVAHSKRFAPSSSGSEKIQKRKEGKGKCPTIAVEGKGKAKVVIKEKCFHCNVDEHWKTNCPKYLVKKKENEGKYDLLVLET
MDSLREMFGQPSIQIKQEANVAHSKRFAPSSSGSEKIQKRKEGKG+ PTIAVEGKGKAKVVIK KCFHCNVDEHWKTNCPKYLVKKKE E
Subjt: MDSLREMFGQPSIQIKQEANVAHSKRFAPSSSGSEKIQKRKEGKGKCPTIAVEGKGKAKVVIKEKCFHCNVDEHWKTNCPKYLVKKKENEGKYDLLVLET
Query: CLVENDQNAWILDSGATNHVCSSLQETSSFKQLEESEMTLKVGTGDVISARAVGDAKLFFENKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNEA
GATNHVCSSLQETSSFKQLEESEMTL VGTGDVISARAVGD KLFF KFMFLENLYIVPKIKRNLV VSCLIEHMYSINFSMNEA
Subjt: CLVENDQNAWILDSGATNHVCSSLQETSSFKQLEESEMTLKVGTGDVISARAVGDAKLFFENKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNEA
Query: FISKNGVHICSAKLEDNLYVLRPNEAKAVLNHEMFRTANTQNKKQRISPNNNTYLCHLRLGHINLDQIGRLVKNVLLNKLEDDSLPPCESCLEGKMTKRP
FISKNG AKLEDNLYVLRPNEAKAVLNHEMFRTANTQNK+QRISPNNNTYL HLRL HINLD+IGRLVKN LLNKL+DDSLPPCESCLEGKMTKRP
Subjt: FISKNGVHICSAKLEDNLYVLRPNEAKAVLNHEMFRTANTQNKKQRISPNNNTYLCHLRLGHINLDQIGRLVKNVLLNKLEDDSLPPCESCLEGKMTKRP
Query: FTRNGYRAKEPLELIHSDLCGPMNVKARGGFIYFISFIDDCSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQNYMIEHGI
FT YRAKEPLELIHSDLCGPMNVKARGGF YFISFIDD SRYGYLYLMEHK EALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQ+YMIEHGI
Subjt: FTRNGYRAKEPLELIHSDLCGPMNVKARGGFIYFISFIDDCSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQNYMIEHGI
Query: QSQLSAPCTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSF
QSQLSAP TPQQNGVSERRNRTLLDMVRSMMSYAQLPSSF
Subjt: QSQLSAPCTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSF
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| A0A5D3BNE1 Gag/pol protein | 3.6e-231 | 92.95 | Show/hide |
Query: MDSLREMFGQPSIQIKQEANVAHSKRFAPSSSGSEKIQKRKEGKGKCPTIAVEGKGKAKVVIKEKCFHCNVDEHWKTNCPKYLVKKKENEGKYDLLVLET
MDSLREMFGQPSIQIKQE NVAHSKRFA SS GSEKIQKRKEGKGK PTIA+EGKGK KVVIKEK FHCNV+EHWKTNCPKYLVKKKE EGKYDLLVLET
Subjt: MDSLREMFGQPSIQIKQEANVAHSKRFAPSSSGSEKIQKRKEGKGKCPTIAVEGKGKAKVVIKEKCFHCNVDEHWKTNCPKYLVKKKENEGKYDLLVLET
Query: CLVENDQNAWILDSGATNHVCSSLQETSSFKQLEESEMTLKVGTGDVISARAVGDAKLFFENKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNEA
CLVENDQNAWILDSGATNHVCSSLQETSSFKQLEESEM LKVGTGDVISARAVGDAKLFF NKFMFLENLYIVPKIKRNLVSVSCLIEHMYSI+FSMNEA
Subjt: CLVENDQNAWILDSGATNHVCSSLQETSSFKQLEESEMTLKVGTGDVISARAVGDAKLFFENKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNEA
Query: FISKNGVHICSAKLEDNLYVLRPNEAKAVLNHEMFRTANTQNKKQRISPNNNTYLCHLRLGHINLDQIGRLVKNVLLNKLEDDSLPPCESCLEGKMTKRP
FISKNGVHICS KLEDNLYVL+PNE KAVLNHEMFRTANTQNK+QRIS NNNTYL HLRLGHINLD+IGRLVKN LLNKLEDDSLPPCESCLEGKMTKRP
Subjt: FISKNGVHICSAKLEDNLYVLRPNEAKAVLNHEMFRTANTQNKKQRISPNNNTYLCHLRLGHINLDQIGRLVKNVLLNKLEDDSLPPCESCLEGKMTKRP
Query: FTRNGYRAKEPLELIHSDLCGPMNVKARGGFIYFISFIDDCSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQNYMIEHGI
FT GYRAKEPLELIHSDLCGPMNVKA GGF YFISFIDD S YGYLYL+EHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQ+YMIEHGI
Subjt: FTRNGYRAKEPLELIHSDLCGPMNVKARGGFIYFISFIDDCSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQNYMIEHGI
Query: QSQLSAPCTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSF
QSQLSAP TPQQNGVSERRNRTLLDMV SMMSY QLPSSF
Subjt: QSQLSAPCTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSF
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 4.1e-35 | 31.14 | Show/hide |
Query: KGKAKVVIKEKCFHCNVDEHWKTNCPKYL----VKKKENEGKYDL-----LVLETCLVEN----DQNAWILDSGATNHVCSSLQETSSFKQLEESEMTLK
KG +K K KC HC + H K +C Y K KENE + + V N D ++LDSGA++H+ + + S + E LK
Subjt: KGKAKVVIKEKCFHCNVDEHWKTNCPKYL----VKKKENEGKYDL-----LVLETCLVEN----DQNAWILDSGATNHVCSSLQETSSFKQLEESEMTLK
Query: VGT---GDVISARAVGDAKLFFENKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNEAFISKNGVHIC-SAKLEDNLYVLRPNEAKAVLNHEMFRT
+ G+ I A G +L +++ + LE++ + NL+SV L E SI F + ISKNG+ + ++ + +N+ V+N + + +
Subjt: VGT---GDVISARAVGDAKLFFENKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNEAFISKNGVHIC-SAKLEDNLYVLRPNEAKAVLNHEMFRT
Query: ANTQNKKQRISPNNNTYLCHLRLGHINLDQIGRLV-KNV-----LLNKLEDDSLPPCESCLEGKMTKRPF--TRNGYRAKEPLELIHSDLCGPMNVKARG
N ++K NN L H R GHI+ ++ + KN+ LLN LE S CE CL GK + PF ++ K PL ++HSD+CGP+
Subjt: ANTQNKKQRISPNNNTYLCHLRLGHINLDQIGRLV-KNV-----LLNKLEDDSLPPCESCLEGKMTKRPF--TRNGYRAKEPLELIHSDLCGPMNVKARG
Query: GFIYFISFIDDCSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQNYMIEHGIQSQLSAPCTPQQNGVSERRNRTLLDMVRS
YF+ F+D + Y YL+++KS+ F+++ + E + K+ L D G EY+ + + ++ GI L+ P TPQ NGVSER RT+ + R+
Subjt: GFIYFISFIDDCSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQNYMIEHGIQSQLSAPCTPQQNGVSERRNRTLLDMVRS
Query: MMSYAQLPSSF
M+S A+L SF
Subjt: MMSYAQLPSSF
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 4.9e-44 | 28.22 | Show/hide |
Query: SEKIQKRKEGKGKCPTIAVEG---------------KGKAKVVIKEK---CFHCNVDEHWKTNCPKYLVKKKENEGK------------YDLLVL-----
+EK++K+ E +G+ G +GK+K K + C++CN H+K +CP K E G+ D +VL
Subjt: SEKIQKRKEGKGKCPTIAVEG---------------KGKAKVVIKEK---CFHCNVDEHWKTNCPKYLVKKKENEGK------------YDLLVL-----
Query: ETCL-VENDQNAWILDSGATNHV-------CSSLQETSSFKQLEESEMTLKVGTGDVISARAVGDAKLFFENKFMFLENLYIVPKIKRNLVSVSCLIEHM
E C+ + ++ W++D+ A++H C + ++ + + G GD+ VG + L+++ VP ++ NL+S L
Subjt: ETCL-VENDQNAWILDSGATNHV-------CSSLQETSSFKQLEESEMTLKVGTGDVISARAVGDAKLFFENKFMFLENLYIVPKIKRNLVSVSCLIEHM
Query: YSINFSMNEAFISKNGVHICSAKLEDNLYVLRPNEAKAVLNHEMFRTANTQNKKQRISPNNNTYLCHLRLGHINLDQIGRLVKNVLLNKLEDDSLPPCES
Y F+ + ++K + I LY + LN + IS + L H R+GH++ + L K L++ + ++ PC+
Subjt: YSINFSMNEAFISKNGVHICSAKLEDNLYVLRPNEAKAVLNHEMFRTANTQNKKQRISPNNNTYLCHLRLGHINLDQIGRLVKNVLLNKLEDDSLPPCES
Query: CLEGKMTKRPFTRNGYRAKEPLELIHSDLCGPMNVKARGGFIYFISFIDDCSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLR
CL GK + F + R L+L++SD+CGPM +++ GG YF++FIDD SR ++Y+++ K + + F+++ VE +K+K LRSD GGEY
Subjt: CLEGKMTKRPFTRNGYRAKEPLELIHSDLCGPMNVKARGGFIYFISFIDDCSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLR
Query: FQNYMIEHGIQSQLSAPCTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSF
F+ Y HGI+ + + P TPQ NGV+ER NRT+++ VRSM+ A+LP SF
Subjt: FQNYMIEHGIQSQLSAPCTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSF
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| Q12491 Transposon Ty2-B Gag-Pol polyprotein | 3.2e-19 | 26.53 | Show/hide |
Query: ILDSGATNHVCSSLQETSSFKQLEESEMTLKVGTGDVISARAVGDAKLFFENKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNEAFISKNGVHIC
++DSGA+ + S SE+ + I A+G+ F+N P I +L+S+S L + F+ N +G +
Subjt: ILDSGATNHVCSSLQETSSFKQLEESEMTLKVGTGDVISARAVGDAKLFFENKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNEAFISKNGVHIC
Query: SAKLEDNLYVLRPNEAKAVLNHEMFRTANTQNKKQRISPNNNTY-LCHLRLGHINLDQIGR-LVKNVLLNKLEDD------SLPPCESCLEGKMTKRPFT
+ Y L ++ + +H T N NK + S N Y L H LGH N I + L KN + E D S C CL GK TK
Subjt: SAKLEDNLYVLRPNEAKAVLNHEMFRTANTQNKKQRISPNNNTY-LCHLRLGHINLDQIGR-LVKNVLLNKLEDD------SLPPCESCLEGKMTKRPFT
Query: RNGYRAK-----EPLELIHSDLCGPMNVKARGGFIYFISFIDDCSRYGYLYLMEHKSE--ALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQNYM
+ G R K EP + +H+D+ GP++ + YFISF D+ +R+ ++Y + + E L F ++N + ++ +++ DRG EY + +
Subjt: RNGYRAK-----EPLELIHSDLCGPMNVKARGGFIYFISFIDDCSRYGYLYLMEHKSE--ALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQNYM
Query: IEHGIQSQLSAPCTPQQNGVSERRNRTLLDMVRSMMSYAQLPS
GI + + + +GV+ER NRTLL+ R+++ + LP+
Subjt: IEHGIQSQLSAPCTPQQNGVSERRNRTLLDMVRSMMSYAQLPS
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 4.7e-31 | 28.24 | Show/hide |
Query: NAWILDSGATNHVCSSLQETSSFKQLEESEMTLKVGTGDVISARAVGDAKLFFENKFMFLENLYIVPKIKRNLVSVSCLIE------HMYSINFSMNEAF
N W+LDSGAT+H+ S S + + + V G I G L +++ + L N+ VP I +NL+SV L + +F + +
Subjt: NAWILDSGATNHVCSSLQETSSFKQLEESEMTLKVGTGDVISARAVGDAKLFFENKFMFLENLYIVPKIKRNLVSVSCLIE------HMYSINFSMNEAF
Query: ISKNGVHICSAKLEDNLYVLRPNEAKAVLNHEMFRTANTQNKKQRISPNNNTYLCHLRLGHINLDQIGRLVKNVLLNKLE-DDSLPPCESCLEGKMTKRP
GV + K +D LY E + + A+ +K S H RLGH + ++ N L+ L C CL K K P
Subjt: ISKNGVHICSAKLEDNLYVLRPNEAKAVLNHEMFRTANTQNKKQRISPNNNTYLCHLRLGHINLDQIGRLVKNVLLNKLE-DDSLPPCESCLEGKMTKRP
Query: FTRNGYRAKEPLELIHSDLCGPMNVKARGGFIYFISFIDDCSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQNYMIEHGI
F+++ + PLE I+SD+ + + + Y++ F+D +RY +LY ++ KS+ E F +K +EN +I SD GGE++ L Y +HGI
Subjt: FTRNGYRAKEPLELIHSDLCGPMNVKARGGFIYFISFIDDCSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQNYMIEHGI
Query: QSQLSAPCTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSF
S P TP+ NG+SER++R +++ +++S+A +P ++
Subjt: QSQLSAPCTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSF
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 5.1e-33 | 28.41 | Show/hide |
Query: NVAHSKRFAPSSSGSEKIQKRKEGKGKCPTIAVEGKGKAKVVIKEKCFHCNVDEHWKTNCPKY-----LVKKKENEGKYDLLVLETCLVEN---DQNAWI
N S + PSSSGS R + + P + +C C+V H CP+ ++++ + L N + N W+
Subjt: NVAHSKRFAPSSSGSEKIQKRKEGKGKCPTIAVEGKGKAKVVIKEKCFHCNVDEHWKTNCPKY-----LVKKKENEGKYDLLVLETCLVEN---DQNAWI
Query: LDSGATNHVCSSLQETSSFKQLEESEMTLKVGTGDVISARAVGDAKLFFENKFMFLENLYIVPKIKRNLVSVSCLIE-HMYSINFSMNEAFIS--KNGVH
LDSGAT+H+ S SF Q + + G I G A L ++ + L + VP I +NL+SV L + S+ F + GV
Subjt: LDSGATNHVCSSLQETSSFKQLEESEMTLKVGTGDVISARAVGDAKLFFENKFMFLENLYIVPKIKRNLVSVSCLIE-HMYSINFSMNEAFIS--KNGVH
Query: ICSAKLEDNLYVLRPNEAKAVLNHEMFRTANTQNKKQRISPNNNTYLCHLRLGHINLDQIGRLVKNVLLNKLE-DDSLPPCESCLEGKMTKRPFTRNGYR
+ K +D LY ++AV MF A+ +K S H RLGH +L + ++ N L L L C C K K PF+ +
Subjt: ICSAKLEDNLYVLRPNEAKAVLNHEMFRTANTQNKKQRISPNNNTYLCHLRLGHINLDQIGRLVKNVLLNKLE-DDSLPPCESCLEGKMTKRPFTRNGYR
Query: AKEPLELIHSDLCGPMNVKARGGFIYFISFIDDCSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQNYMIEHGIQSQLSAP
+ +PLE I+SD+ + + + Y++ F+D +RY +LY ++ KS+ + F +K+ VEN +I L SD GGE++ LR +Y+ +HGI S P
Subjt: AKEPLELIHSDLCGPMNVKARGGFIYFISFIDDCSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQNYMIEHGIQSQLSAP
Query: CTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSF
TP+ NG+SER++R +++M +++S+A +P ++
Subjt: CTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSF
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