| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0025945.1 gag/pol protein [Cucumis melo var. makuwa] | 1.1e-223 | 93.95 | Show/hide |
Query: MDVKTAFLNGNLEESIFMSQPEGFITEGQKQKVCKLNLSIYGLKQASRSWNIRFDTVIKSYSFDQNVDEPCIYKKINKGKVAFLVLYVDDILLIGNDVGY
MDVKTAFLNGNLEESIFMSQPEGFIT+GQ+QKVCKLN SIYGLKQASRSWNIRFDT IKSY FDQNVDEPC+YKKINKGKVAFLVLYVDDILLIGNDVGY
Subjt: MDVKTAFLNGNLEESIFMSQPEGFITEGQKQKVCKLNLSIYGLKQASRSWNIRFDTVIKSYSFDQNVDEPCIYKKINKGKVAFLVLYVDDILLIGNDVGY
Query: LTDVKAWLAAKFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASVVGSLMYV
LTDVKAWLAA+FQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDK+LVRYSMQNSKKGLLPFRHGVHLSKEQ PKTPQEVEDMRRIPYAS VGSLMY
Subjt: LTDVKAWLAAKFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASVVGSLMYV
Query: MLYTRPDICYAVGIVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYEAKDLILTGYTDSDFQTDKDHRKSTSGSVFTLNGGALVWHSIKQGCIADSTME
ML TRPDICYAVGIVSRYQSNPGLDHWTAVKI+LKYLRRTRDYMLVY AKDLILTGYTDSDFQTDKD RKSTSGSVFTLNGGA+VW SIKQGCIADSTME
Subjt: MLYTRPDICYAVGIVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYEAKDLILTGYTDSDFQTDKDHRKSTSGSVFTLNGGALVWHSIKQGCIADSTME
Query: AEYVATCEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKYIERKYHLIREIVQRGDVIVTKNASEHNSTDPFTKILMAKVFEG
AEYVA CEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGK+IERKYHLIREIVQRGDVIVTK ASEHN DPFTK L AKVFEG
Subjt: AEYVATCEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKYIERKYHLIREIVQRGDVIVTKNASEHNSTDPFTKILMAKVFEG
Query: HLESLGLRDMNIR
HLESLGLRDM IR
Subjt: HLESLGLRDMNIR
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| KAA0035907.1 gag/pol protein [Cucumis melo var. makuwa] | 1.7e-221 | 93.22 | Show/hide |
Query: MDVKTAFLNGNLEESIFMSQPEGFITEGQKQKVCKLNLSIYGLKQASRSWNIRFDTVIKSYSFDQNVDEPCIYKKINKGKVAFLVLYVDDILLIGNDVGY
MDVKTAFLNGNLEESIFMSQPEGFIT+GQ+QKVCKLN SIYGLKQASRSWNIRFDT IKSY FDQNVDEPC+YKKINKGKVAFLVLYVDDILLIGNDVGY
Subjt: MDVKTAFLNGNLEESIFMSQPEGFITEGQKQKVCKLNLSIYGLKQASRSWNIRFDTVIKSYSFDQNVDEPCIYKKINKGKVAFLVLYVDDILLIGNDVGY
Query: LTDVKAWLAAKFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASVVGSLMYV
LTDVKAWLAA+FQMKDLGE QYVLGIQIIRDRKNKTLALSQATYIDK+LVRYSMQNSKKGLLPFRHGVHLSKEQ PKTPQEVEDMRRIPYAS VGSLMY
Subjt: LTDVKAWLAAKFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASVVGSLMYV
Query: MLYTRPDICYAVGIVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYEAKDLILTGYTDSDFQTDKDHRKSTSGSVFTLNGGALVWHSIKQGCIADSTME
ML TRPDICYAVGIVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVY AKDLILTGYT+SDFQTDKD RKSTS SVFTLNGGA+VW SIKQGCIADSTME
Subjt: MLYTRPDICYAVGIVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYEAKDLILTGYTDSDFQTDKDHRKSTSGSVFTLNGGALVWHSIKQGCIADSTME
Query: AEYVATCEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKYIERKYHLIREIVQRGDVIVTKNASEHNSTDPFTKILMAKVFEG
AEYVA CEAAKEAVWL+KFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGK+IERKYHLIREIVQRGDVIVTK ASEHN DPFTK L AKVFEG
Subjt: AEYVATCEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKYIERKYHLIREIVQRGDVIVTKNASEHNSTDPFTKILMAKVFEG
Query: HLESLGLRDMNIR
HLESLGLRDM IR
Subjt: HLESLGLRDMNIR
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| KAA0040367.1 gag/pol protein [Cucumis melo var. makuwa] | 3.7e-216 | 90.8 | Show/hide |
Query: MDVKTAFLNGNLEESIFMSQPEGFITEGQKQKVCKLNLSIYGLKQASRSWNIRFDTVIKSYSFDQNVDEPCIYKKINKGKVAFLVLYVDDILLIGNDVGY
MDVKTAFLN NLEESIFMSQPEGFIT+GQ+QKVCKLN SIYGLKQ+SRSWN+RFDT IKSY FDQNVDEPC+YKKINKGKVAFLVLYVDDILLIGNDVGY
Subjt: MDVKTAFLNGNLEESIFMSQPEGFITEGQKQKVCKLNLSIYGLKQASRSWNIRFDTVIKSYSFDQNVDEPCIYKKINKGKVAFLVLYVDDILLIGNDVGY
Query: LTDVKAWLAAKFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASVVGSLMYV
LTDVKAWLA +FQMKDLGE QYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSKK LLPFRHGVHLSKEQCPKTPQE+EDMRRI YAS VGSLMY
Subjt: LTDVKAWLAAKFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASVVGSLMYV
Query: MLYTRPDICYAVGIVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYEAKDLILTGYTDSDFQTDKDHRKSTSGSVFTLNGGALVWHSIKQGCIADSTME
MLYTRPDICYAVGIVSRY NPGLDHWTAVKIILKYLRRTRDYMLVY KDLILTGYTDSDFQTDKD RKSTSGSVFTLN GA+VWHSIKQGCIADSTME
Subjt: MLYTRPDICYAVGIVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYEAKDLILTGYTDSDFQTDKDHRKSTSGSVFTLNGGALVWHSIKQGCIADSTME
Query: AEYVATCEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKYIERKYHLIREIVQRGDVIVTKNASEHNSTDPFTKILMAKVFEG
AEY+A CEAAKE VWLRKFLHDLEVVPNMNL ITLYCDNSGAVANSKEPR+HKRGK+IERKYHLIREIVQR DVIVTK SEH TDPFTK L AKVFEG
Subjt: AEYVATCEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKYIERKYHLIREIVQRGDVIVTKNASEHNSTDPFTKILMAKVFEG
Query: HLESLGLRDMNIR
HLESLGLRDM IR
Subjt: HLESLGLRDMNIR
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| KAA0043583.1 putative Integrase core domain [Cucumis melo var. makuwa] | 1.6e-227 | 100 | Show/hide |
Query: PEGFITEGQKQKVCKLNLSIYGLKQASRSWNIRFDTVIKSYSFDQNVDEPCIYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAKFQMKDLGEA
PEGFITEGQKQKVCKLNLSIYGLKQASRSWNIRFDTVIKSYSFDQNVDEPCIYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAKFQMKDLGEA
Subjt: PEGFITEGQKQKVCKLNLSIYGLKQASRSWNIRFDTVIKSYSFDQNVDEPCIYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAKFQMKDLGEA
Query: QYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASVVGSLMYVMLYTRPDICYAVGIVSRYQS
QYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASVVGSLMYVMLYTRPDICYAVGIVSRYQS
Subjt: QYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASVVGSLMYVMLYTRPDICYAVGIVSRYQS
Query: NPGLDHWTAVKIILKYLRRTRDYMLVYEAKDLILTGYTDSDFQTDKDHRKSTSGSVFTLNGGALVWHSIKQGCIADSTMEAEYVATCEAAKEAVWLRKFL
NPGLDHWTAVKIILKYLRRTRDYMLVYEAKDLILTGYTDSDFQTDKDHRKSTSGSVFTLNGGALVWHSIKQGCIADSTMEAEYVATCEAAKEAVWLRKFL
Subjt: NPGLDHWTAVKIILKYLRRTRDYMLVYEAKDLILTGYTDSDFQTDKDHRKSTSGSVFTLNGGALVWHSIKQGCIADSTMEAEYVATCEAAKEAVWLRKFL
Query: HDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKYIERKYHLIREIVQRGDVIVTKNASEHNSTDPFTKILMAKVFEGHLESLGLRDMNIR
HDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKYIERKYHLIREIVQRGDVIVTKNASEHNSTDPFTKILMAKVFEGHLESLGLRDMNIR
Subjt: HDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKYIERKYHLIREIVQRGDVIVTKNASEHNSTDPFTKILMAKVFEGHLESLGLRDMNIR
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| KAA0059226.1 gag/pol protein [Cucumis melo var. makuwa] | 1.1e-223 | 93.95 | Show/hide |
Query: MDVKTAFLNGNLEESIFMSQPEGFITEGQKQKVCKLNLSIYGLKQASRSWNIRFDTVIKSYSFDQNVDEPCIYKKINKGKVAFLVLYVDDILLIGNDVGY
MDVKTAFLNGNLEESIFMSQPEGFIT+GQ+QKVCKLN SIYGLKQASRSWNIRFDT IKSY FDQNVDEPC+YKKINKGKVAFLVLYVDDILLIGNDVGY
Subjt: MDVKTAFLNGNLEESIFMSQPEGFITEGQKQKVCKLNLSIYGLKQASRSWNIRFDTVIKSYSFDQNVDEPCIYKKINKGKVAFLVLYVDDILLIGNDVGY
Query: LTDVKAWLAAKFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASVVGSLMYV
LTDVKAWLAA+FQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDK+LVRYSMQNSKKGLLPFRHGVHLSKEQ PKTPQEVEDMRRIPYAS VGSLMY
Subjt: LTDVKAWLAAKFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASVVGSLMYV
Query: MLYTRPDICYAVGIVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYEAKDLILTGYTDSDFQTDKDHRKSTSGSVFTLNGGALVWHSIKQGCIADSTME
ML TRPDICYAVGIVSRYQSNPGLDHWTAVKI+LKYLRRTRDYMLVY AKDLILTGYTDSDFQTDKD RKSTSGSVFTLNGGA+VW SIKQGCIADSTME
Subjt: MLYTRPDICYAVGIVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYEAKDLILTGYTDSDFQTDKDHRKSTSGSVFTLNGGALVWHSIKQGCIADSTME
Query: AEYVATCEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKYIERKYHLIREIVQRGDVIVTKNASEHNSTDPFTKILMAKVFEG
AEYVA CEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGK+IERKYHLIREIVQRGDVIVTK ASEHN DPFTK L AKVFEG
Subjt: AEYVATCEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKYIERKYHLIREIVQRGDVIVTKNASEHNSTDPFTKILMAKVFEG
Query: HLESLGLRDMNIR
HLESLGLRDM IR
Subjt: HLESLGLRDMNIR
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7T2V9 Gag/pol protein | 8.3e-222 | 93.22 | Show/hide |
Query: MDVKTAFLNGNLEESIFMSQPEGFITEGQKQKVCKLNLSIYGLKQASRSWNIRFDTVIKSYSFDQNVDEPCIYKKINKGKVAFLVLYVDDILLIGNDVGY
MDVKTAFLNGNLEESIFMSQPEGFIT+GQ+QKVCKLN SIYGLKQASRSWNIRFDT IKSY FDQNVDEPC+YKKINKGKVAFLVLYVDDILLIGNDVGY
Subjt: MDVKTAFLNGNLEESIFMSQPEGFITEGQKQKVCKLNLSIYGLKQASRSWNIRFDTVIKSYSFDQNVDEPCIYKKINKGKVAFLVLYVDDILLIGNDVGY
Query: LTDVKAWLAAKFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASVVGSLMYV
LTDVKAWLAA+FQMKDLGE QYVLGIQIIRDRKNKTLALSQATYIDK+LVRYSMQNSKKGLLPFRHGVHLSKEQ PKTPQEVEDMRRIPYAS VGSLMY
Subjt: LTDVKAWLAAKFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASVVGSLMYV
Query: MLYTRPDICYAVGIVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYEAKDLILTGYTDSDFQTDKDHRKSTSGSVFTLNGGALVWHSIKQGCIADSTME
ML TRPDICYAVGIVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVY AKDLILTGYT+SDFQTDKD RKSTS SVFTLNGGA+VW SIKQGCIADSTME
Subjt: MLYTRPDICYAVGIVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYEAKDLILTGYTDSDFQTDKDHRKSTSGSVFTLNGGALVWHSIKQGCIADSTME
Query: AEYVATCEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKYIERKYHLIREIVQRGDVIVTKNASEHNSTDPFTKILMAKVFEG
AEYVA CEAAKEAVWL+KFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGK+IERKYHLIREIVQRGDVIVTK ASEHN DPFTK L AKVFEG
Subjt: AEYVATCEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKYIERKYHLIREIVQRGDVIVTKNASEHNSTDPFTKILMAKVFEG
Query: HLESLGLRDMNIR
HLESLGLRDM IR
Subjt: HLESLGLRDMNIR
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| A0A5A7TJH9 Putative Integrase core domain | 7.7e-228 | 100 | Show/hide |
Query: PEGFITEGQKQKVCKLNLSIYGLKQASRSWNIRFDTVIKSYSFDQNVDEPCIYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAKFQMKDLGEA
PEGFITEGQKQKVCKLNLSIYGLKQASRSWNIRFDTVIKSYSFDQNVDEPCIYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAKFQMKDLGEA
Subjt: PEGFITEGQKQKVCKLNLSIYGLKQASRSWNIRFDTVIKSYSFDQNVDEPCIYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAKFQMKDLGEA
Query: QYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASVVGSLMYVMLYTRPDICYAVGIVSRYQS
QYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASVVGSLMYVMLYTRPDICYAVGIVSRYQS
Subjt: QYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASVVGSLMYVMLYTRPDICYAVGIVSRYQS
Query: NPGLDHWTAVKIILKYLRRTRDYMLVYEAKDLILTGYTDSDFQTDKDHRKSTSGSVFTLNGGALVWHSIKQGCIADSTMEAEYVATCEAAKEAVWLRKFL
NPGLDHWTAVKIILKYLRRTRDYMLVYEAKDLILTGYTDSDFQTDKDHRKSTSGSVFTLNGGALVWHSIKQGCIADSTMEAEYVATCEAAKEAVWLRKFL
Subjt: NPGLDHWTAVKIILKYLRRTRDYMLVYEAKDLILTGYTDSDFQTDKDHRKSTSGSVFTLNGGALVWHSIKQGCIADSTMEAEYVATCEAAKEAVWLRKFL
Query: HDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKYIERKYHLIREIVQRGDVIVTKNASEHNSTDPFTKILMAKVFEGHLESLGLRDMNIR
HDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKYIERKYHLIREIVQRGDVIVTKNASEHNSTDPFTKILMAKVFEGHLESLGLRDMNIR
Subjt: HDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKYIERKYHLIREIVQRGDVIVTKNASEHNSTDPFTKILMAKVFEGHLESLGLRDMNIR
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| A0A5A7TZD0 Gag/pol protein | 5.2e-224 | 93.95 | Show/hide |
Query: MDVKTAFLNGNLEESIFMSQPEGFITEGQKQKVCKLNLSIYGLKQASRSWNIRFDTVIKSYSFDQNVDEPCIYKKINKGKVAFLVLYVDDILLIGNDVGY
MDVKTAFLNGNLEESIFMSQPEGFIT+GQ+QKVCKLN SIYGLKQASRSWNIRFDT IKSY FDQNVDEPC+YKKINKGKVAFLVLYVDDILLIGNDVGY
Subjt: MDVKTAFLNGNLEESIFMSQPEGFITEGQKQKVCKLNLSIYGLKQASRSWNIRFDTVIKSYSFDQNVDEPCIYKKINKGKVAFLVLYVDDILLIGNDVGY
Query: LTDVKAWLAAKFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASVVGSLMYV
LTDVKAWLAA+FQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDK+LVRYSMQNSKKGLLPFRHGVHLSKEQ PKTPQEVEDMRRIPYAS VGSLMY
Subjt: LTDVKAWLAAKFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASVVGSLMYV
Query: MLYTRPDICYAVGIVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYEAKDLILTGYTDSDFQTDKDHRKSTSGSVFTLNGGALVWHSIKQGCIADSTME
ML TRPDICYAVGIVSRYQSNPGLDHWTAVKI+LKYLRRTRDYMLVY AKDLILTGYTDSDFQTDKD RKSTSGSVFTLNGGA+VW SIKQGCIADSTME
Subjt: MLYTRPDICYAVGIVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYEAKDLILTGYTDSDFQTDKDHRKSTSGSVFTLNGGALVWHSIKQGCIADSTME
Query: AEYVATCEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKYIERKYHLIREIVQRGDVIVTKNASEHNSTDPFTKILMAKVFEG
AEYVA CEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGK+IERKYHLIREIVQRGDVIVTK ASEHN DPFTK L AKVFEG
Subjt: AEYVATCEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKYIERKYHLIREIVQRGDVIVTKNASEHNSTDPFTKILMAKVFEG
Query: HLESLGLRDMNIR
HLESLGLRDM IR
Subjt: HLESLGLRDMNIR
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| A0A5A7UYE8 Gag/pol protein | 5.2e-224 | 93.95 | Show/hide |
Query: MDVKTAFLNGNLEESIFMSQPEGFITEGQKQKVCKLNLSIYGLKQASRSWNIRFDTVIKSYSFDQNVDEPCIYKKINKGKVAFLVLYVDDILLIGNDVGY
MDVKTAFLNGNLEESIFMSQPEGFIT+GQ+QKVCKLN SIYGLKQASRSWNIRFDT IKSY FDQNVDEPC+YKKINKGKVAFLVLYVDDILLIGNDVGY
Subjt: MDVKTAFLNGNLEESIFMSQPEGFITEGQKQKVCKLNLSIYGLKQASRSWNIRFDTVIKSYSFDQNVDEPCIYKKINKGKVAFLVLYVDDILLIGNDVGY
Query: LTDVKAWLAAKFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASVVGSLMYV
LTDVKAWLAA+FQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDK+LVRYSMQNSKKGLLPFRHGVHLSKEQ PKTPQEVEDMRRIPYAS VGSLMY
Subjt: LTDVKAWLAAKFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASVVGSLMYV
Query: MLYTRPDICYAVGIVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYEAKDLILTGYTDSDFQTDKDHRKSTSGSVFTLNGGALVWHSIKQGCIADSTME
ML TRPDICYAVGIVSRYQSNPGLDHWTAVKI+LKYLRRTRDYMLVY AKDLILTGYTDSDFQTDKD RKSTSGSVFTLNGGA+VW SIKQGCIADSTME
Subjt: MLYTRPDICYAVGIVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYEAKDLILTGYTDSDFQTDKDHRKSTSGSVFTLNGGALVWHSIKQGCIADSTME
Query: AEYVATCEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKYIERKYHLIREIVQRGDVIVTKNASEHNSTDPFTKILMAKVFEG
AEYVA CEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGK+IERKYHLIREIVQRGDVIVTK ASEHN DPFTK L AKVFEG
Subjt: AEYVATCEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKYIERKYHLIREIVQRGDVIVTKNASEHNSTDPFTKILMAKVFEG
Query: HLESLGLRDMNIR
HLESLGLRDM IR
Subjt: HLESLGLRDMNIR
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| A0A5D3DI92 Gag/pol protein | 1.8e-216 | 90.8 | Show/hide |
Query: MDVKTAFLNGNLEESIFMSQPEGFITEGQKQKVCKLNLSIYGLKQASRSWNIRFDTVIKSYSFDQNVDEPCIYKKINKGKVAFLVLYVDDILLIGNDVGY
MDVKTAFLN NLEESIFMSQPEGFIT+GQ+QKVCKLN SIYGLKQ+SRSWN+RFDT IKSY FDQNVDEPC+YKKINKGKVAFLVLYVDDILLIGNDVGY
Subjt: MDVKTAFLNGNLEESIFMSQPEGFITEGQKQKVCKLNLSIYGLKQASRSWNIRFDTVIKSYSFDQNVDEPCIYKKINKGKVAFLVLYVDDILLIGNDVGY
Query: LTDVKAWLAAKFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASVVGSLMYV
LTDVKAWLA +FQMKDLGE QYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSKK LLPFRHGVHLSKEQCPKTPQE+EDMRRI YAS VGSLMY
Subjt: LTDVKAWLAAKFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASVVGSLMYV
Query: MLYTRPDICYAVGIVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYEAKDLILTGYTDSDFQTDKDHRKSTSGSVFTLNGGALVWHSIKQGCIADSTME
MLYTRPDICYAVGIVSRY NPGLDHWTAVKIILKYLRRTRDYMLVY KDLILTGYTDSDFQTDKD RKSTSGSVFTLN GA+VWHSIKQGCIADSTME
Subjt: MLYTRPDICYAVGIVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYEAKDLILTGYTDSDFQTDKDHRKSTSGSVFTLNGGALVWHSIKQGCIADSTME
Query: AEYVATCEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKYIERKYHLIREIVQRGDVIVTKNASEHNSTDPFTKILMAKVFEG
AEY+A CEAAKE VWLRKFLHDLEVVPNMNL ITLYCDNSGAVANSKEPR+HKRGK+IERKYHLIREIVQR DVIVTK SEH TDPFTK L AKVFEG
Subjt: AEYVATCEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKYIERKYHLIREIVQRGDVIVTKNASEHNSTDPFTKILMAKVFEG
Query: HLESLGLRDMNIR
HLESLGLRDM IR
Subjt: HLESLGLRDMNIR
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 8.6e-67 | 36.45 | Show/hide |
Query: MDVKTAFLNGNLEESIFMSQPEGFITEGQKQKVCKLNLSIYGLKQASRSWNIRFDTVIKSYSFDQNVDEPCIY--KKINKGKVAFLVLYVDDILLIGNDV
MDVKTAFLNG L+E I+M P+G VCKLN +IYGLKQA+R W F+ +K F + + CIY K N + +++LYVDD+++ D+
Subjt: MDVKTAFLNGNLEESIFMSQPEGFITEGQKQKVCKLNLSIYGLKQASRSWNIRFDTVIKSYSFDQNVDEPCIY--KKINKGKVAFLVLYVDDILLIGNDV
Query: GYLTDVKAWLAAKFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHL----SKEQCPKTPQEVEDMRRIPYASVV
+ + K +L KF+M DL E ++ +GI+I + + + LSQ+ Y+ K+L +++M+N P ++ S E C P S++
Subjt: GYLTDVKAWLAAKFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHL----SKEQCPKTPQEVEDMRRIPYASVV
Query: GSLMYVMLYTRPDICYAVGIVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYE---AKDLILTGYTDSDFQTDKDHRKSTSGSVFTL-NGGALVWHSIK
G LMY+ML TRPD+ AV I+SRY S + W +K +L+YL+ T D L+++ A + + GY DSD+ + RKST+G +F + + + W++ +
Subjt: GSLMYVMLYTRPDICYAVGIVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYE---AKDLILTGYTDSDFQTDKDHRKSTSGSVFTL-NGGALVWHSIK
Query: QGCIADSTMEAEYVATCEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKYIERKYHLIREIVQRGDVIVTKNASEHNSTDPFT
Q +A S+ EAEY+A EA +EA+WL+ L + + + PI +Y DN G ++ + P HKR K+I+ KYH RE VQ + + +E+ D FT
Subjt: QGCIADSTMEAEYVATCEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKYIERKYHLIREIVQRGDVIVTKNASEHNSTDPFT
Query: KILMAKVFEGHLESLGL
K L A F + LGL
Subjt: KILMAKVFEGHLESLGL
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.0e-103 | 46.08 | Show/hide |
Query: MDVKTAFLNGNLEESIFMSQPEGFITEGQKQKVCKLNLSIYGLKQASRSWNIRFDTVIKSYSFDQNVDEPCIY-KKINKGKVAFLVLYVDDILLIGNDVG
+DVKTAFL+G+LEE I+M QPEGF G+K VCKLN S+YGLKQA R W ++FD+ +KS ++ + +PC+Y K+ ++ L+LYVDD+L++G D G
Subjt: MDVKTAFLNGNLEESIFMSQPEGFITEGQKQKVCKLNLSIYGLKQASRSWNIRFDTVIKSYSFDQNVDEPCIY-KKINKGKVAFLVLYVDDILLIGNDVG
Query: YLTDVKAWLAAKFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASVVGSLMY
+ +K L+ F MKDLG AQ +LG++I+R+R ++ L LSQ YI+++L R++M+N+K P + LSK+ CP T +E +M ++PY+S VGSLMY
Subjt: YLTDVKAWLAAKFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASVVGSLMY
Query: VMLYTRPDICYAVGIVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYEAKDLILTGYTDSDFQTDKDHRKSTSGSVFTLNGGALVWHSIKQGCIADSTM
M+ TRPDI +AVG+VSR+ NPG +HW AVK IL+YLR T L + D IL GYTD+D D D+RKS++G +FT +GGA+ W S Q C+A ST
Subjt: VMLYTRPDICYAVGIVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYEAKDLILTGYTDSDFQTDKDHRKSTSGSVFTLNGGALVWHSIKQGCIADSTM
Query: EAEYVATCEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKYIERKYHLIREIVQRGDVIVTKNASEHNSTDPFTKILMAKVFE
EAEY+A E KE +WL++FL +L + +YCD+ A+ SK H R K+I+ +YH IRE+V + V K ++ N D TK++ FE
Subjt: EAEYVATCEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKYIERKYHLIREIVQRGDVIVTKNASEHNSTDPFTKILMAKVFE
Query: GHLESLGL
E +G+
Subjt: GHLESLGL
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| P25600 Putative transposon Ty5-1 protein YCL074W | 1.7e-35 | 32.8 | Show/hide |
Query: MDVKTAFLNGNLEESIFMSQPEGFITEGQKQKVCKLNLSIYGLKQASRSWNIRFDTVIKSYSFDQNVDEPCIYKKINKGKVAFLVLYVDDILLIGNDVGY
MDV TAFLN ++E I++ QP GF+ E V +L +YGLKQA WN + +K F ++ E +Y + ++ +YVDD+L+
Subjt: MDVKTAFLNGNLEESIFMSQPEGFITEGQKQKVCKLNLSIYGLKQASRSWNIRFDTVIKSYSFDQNVDEPCIYKKINKGKVAFLVLYVDDILLIGNDVGY
Query: LTDVKAWLAAKFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASVVGSLMYV
VK L + MKDLG+ LG+ I N + LS YI K + K P + SK T ++D+ PY S+VG L++
Subjt: LTDVKAWLAAKFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASVVGSLMYV
Query: MLYTRPDICYAVGIVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYEA-KDLILTGYTDSDFQTDKDHRKSTSGSVFTLNGGALVWHSIK-QGCIADST
RPDI Y V ++SR+ P H + + +L+YL TR L Y + L LT Y D+ D ST G V L G + W S K +G I +
Subjt: MLYTRPDICYAVGIVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYEA-KDLILTGYTDSDFQTDKDHRKSTSGSVFTLNGGALVWHSIK-QGCIADST
Query: MEAEYVATCEAAKE
EAEY+ E E
Subjt: MEAEYVATCEAAKE
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.4e-56 | 33.82 | Show/hide |
Query: MDVKTAFLNGNLEESIFMSQPEGFITEGQKQKVCKLNLSIYGLKQASRSWNIRFDTVIKSYSFDQNVDEPCIYKKINKGKVAFLVLYVDDILLIGNDVGY
+DV AFL G L + ++MSQP GFI + + VCKL ++YGLKQA R+W + + + F +V + ++ + ++++YVDDIL+ GND
Subjt: MDVKTAFLNGNLEESIFMSQPEGFITEGQKQKVCKLNLSIYGLKQASRSWNIRFDTVIKSYSFDQNVDEPCIYKKINKGKVAFLVLYVDDILLIGNDVGY
Query: LTDVKAWLAAKFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASVVGSLMYV
L + L+ +F +KD E Y LGI+ R L LSQ YI +L R +M +K P LS K E Y +VGSL Y
Subjt: LTDVKAWLAAKFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASVVGSLMYV
Query: MLYTRPDICYAVGIVSRYQSNPGLDHWTAVKIILKYLRRTRDY-MLVYEAKDLILTGYTDSDFQTDKDHRKSTSGSVFTLNGGALVWHSIKQGCIADSTM
+ +TRPDI YAV +S++ P +H A+K IL+YL T ++ + + + L L Y+D+D+ DKD ST+G + L + W S KQ + S+
Subjt: MLYTRPDICYAVGIVSRYQSNPGLDHWTAVKIILKYLRRTRDY-MLVYEAKDLILTGYTDSDFQTDKDHRKSTSGSVFTLNGGALVWHSIKQGCIADSTM
Query: EAEYVATCEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKYIERKYHLIREIVQRGDVIVTKNASEHNSTDPFTKILMAKVFE
EAEY + + E W+ L +L + + P +YCDN GA P H R K+I YH IR VQ G + V ++ D TK L F+
Subjt: EAEYVATCEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKYIERKYHLIREIVQRGDVIVTKNASEHNSTDPFTKILMAKVFE
Query: GHLESLGL
+G+
Subjt: GHLESLGL
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.9e-58 | 33.09 | Show/hide |
Query: MDVKTAFLNGNLEESIFMSQPEGFITEGQKQKVCKLNLSIYGLKQASRSWNIRFDTVIKSYSFDQNVDEPCIYKKINKGKVAFLVLYVDDILLIGNDVGY
+DV AFL G L + ++MSQP GF+ + + VC+L +IYGLKQA R+W + T + + F ++ + ++ + ++++YVDDIL+ GND
Subjt: MDVKTAFLNGNLEESIFMSQPEGFITEGQKQKVCKLNLSIYGLKQASRSWNIRFDTVIKSYSFDQNVDEPCIYKKINKGKVAFLVLYVDDILLIGNDVGY
Query: LTDVKAWLAAKFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASVVGSLMYV
L L+ +F +K+ + Y LGI+ R + L LSQ Y +L R +M +K P L+ K P E Y +VGSL Y
Subjt: LTDVKAWLAAKFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASVVGSLMYV
Query: MLYTRPDICYAVGIVSRYQSNPGLDHWTAVKIILKYLRRTRDY-MLVYEAKDLILTGYTDSDFQTDKDHRKSTSGSVFTLNGGALVWHSIKQGCIADSTM
+ +TRPD+ YAV +S+Y P DHW A+K +L+YL T D+ + + + L L Y+D+D+ D D ST+G + L + W S KQ + S+
Subjt: MLYTRPDICYAVGIVSRYQSNPGLDHWTAVKIILKYLRRTRDY-MLVYEAKDLILTGYTDSDFQTDKDHRKSTSGSVFTLNGGALVWHSIKQGCIADSTM
Query: EAEYVATCEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKYIERKYHLIREIVQRGDVIVTKNASEHNSTDPFTKILMAKVFE
EAEY + + E W+ L +L + ++ P +YCDN GA P H R K+I YH IR VQ G + V ++ D TK L F+
Subjt: EAEYVATCEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKYIERKYHLIREIVQRGDVIVTKNASEHNSTDPFTKILMAKVFE
Query: GHLESLGL
+G+
Subjt: GHLESLGL
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | 3.7e-49 | 32.53 | Show/hide |
Query: MDVKTAFLNGNLEESIFMSQPEGFIT-EGQK---QKVCKLNLSIYGLKQASRSWNIRFDTVIKSYSFDQNVDEPCIYKKINKGKVAFLVLYVDDILLIGN
+D+ AFLNG+L+E I+M P G+ +G VC L SIYGLKQASR W ++F + + F Q+ + + KI +++YVDDI++ N
Subjt: MDVKTAFLNGNLEESIFMSQPEGFIT-EGQK---QKVCKLNLSIYGLKQASRSWNIRFDTVIKSYSFDQNVDEPCIYKKINKGKVAFLVLYVDDILLIGN
Query: DVGYLTDVKAWLAAKFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASVVGS
+ + ++K+ L + F+++DLG +Y LG++I R + + Q Y +L + K +P V S + + D + Y ++G
Subjt: DVGYLTDVKAWLAAKFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASVVGS
Query: LMYVMLYTRPDICYAVGIVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYEAK-DLILTGYTDSDFQTDKDHRKSTSGSVFTLNGGALVWHSIKQGCIA
LMY+ + TR DI +AV +S++ P L H AV IL Y++ T L Y ++ ++ L ++D+ FQ+ KD R+ST+G L + W S KQ ++
Subjt: LMYVMLYTRPDICYAVGIVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYEAK-DLILTGYTDSDFQTDKDHRKSTSGSVFTLNGGALVWHSIKQGCIA
Query: DSTMEAEYVATCEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKYIERKYHLIRE
S+ EAEY A A E +WL +F +L++ ++ P L+CDN+ A+ + H+R K+IE H +RE
Subjt: DSTMEAEYVATCEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKYIERKYHLIRE
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| ATMG00240.1 Gag-Pol-related retrotransposon family protein | 4.8e-04 | 35.9 | Show/hide |
Query: MYVMLYTRPDICYAVGIVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYEA-KDLILTGYTDSDFQTDKDHRKSTSG
MY+ + TRPD+ +AV +S++ S AV +L Y++ T L Y A DL L + DSD+ + D R+S +G
Subjt: MYVMLYTRPDICYAVGIVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYEA-KDLILTGYTDSDFQTDKDHRKSTSG
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| ATMG00810.1 DNA/RNA polymerases superfamily protein | 2.3e-22 | 33.47 | Show/hide |
Query: FLVLYVDDILLIGNDVGYLTDVKAWLAAKFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSK--KGLLPFRHGVHLSKEQCPKTPQ
+L+LYVDDILL G+ L + L++ F MKDLG Y LGIQI L LSQ Y +++L M + K LP + +S + P
Subjt: FLVLYVDDILLIGNDVGYLTDVKAWLAAKFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSK--KGLLPFRHGVHLSKEQCPKTPQ
Query: EVEDMRRIPYASVVGSLMYVMLYTRPDICYAVGIVSRYQSNPGLDHWTAVKIILKYLRRTRDY-MLVYEAKDLILTGYTDSDFQTDKDHRKSTSGSVFTL
+ D R S+VG+L Y+ L TRPDI YAV IV + P L + +K +L+Y++ T + + +++ L + + DSD+ R+ST+G L
Subjt: EVEDMRRIPYASVVGSLMYVMLYTRPDICYAVGIVSRYQSNPGLDHWTAVKIILKYLRRTRDY-MLVYEAKDLILTGYTDSDFQTDKDHRKSTSGSVFTL
Query: NGGALVWHSIKQGCIADSTMEAEYVATCEAAKEAVW
+ W + +Q ++ S+ E EY A A E W
Subjt: NGGALVWHSIKQGCIADSTMEAEYVATCEAAKEAVW
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