| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0025945.1 gag/pol protein [Cucumis melo var. makuwa] | 1.7e-68 | 86.16 | Show/hide |
Query: MDDILLIGNDVGYLTNVKTWLAAQFQMKDFREAQYVLGIQIIRDRKNKMLALSQATYICKMLVRYLMQNSKKGLLPFRHGVHLSKEQFPKTPQEVKDIRR
+DDILLIGNDVGYLT+VK WLAAQFQMKD EAQYVLGIQIIRDRKNK LALSQATYI K+LVRY MQNSKKGLLPFRHGVHLSKEQ PKTPQEV+D+RR
Subjt: MDDILLIGNDVGYLTNVKTWLAAQFQMKDFREAQYVLGIQIIRDRKNKMLALSQATYICKMLVRYLMQNSKKGLLPFRHGVHLSKEQFPKTPQEVKDIRR
Query: IFYASVVGSLMYVMLYTRPDICYAVGIISRYQSNPRLDHSMAVKIILKYLRITRDYMLV
I YAS VGSLMY ML TRPDICYAVGI+SRYQSNP LDH AVKI+LKYLR TRDYMLV
Subjt: IFYASVVGSLMYVMLYTRPDICYAVGIISRYQSNPRLDHSMAVKIILKYLRITRDYMLV
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| KAA0043583.1 putative Integrase core domain [Cucumis melo var. makuwa] | 1.8e-70 | 88.68 | Show/hide |
Query: MDDILLIGNDVGYLTNVKTWLAAQFQMKDFREAQYVLGIQIIRDRKNKMLALSQATYICKMLVRYLMQNSKKGLLPFRHGVHLSKEQFPKTPQEVKDIRR
+DDILLIGNDVGYLT+VK WLAA+FQMKD EAQYVLGIQIIRDRKNK LALSQATYI KMLVRY MQNSKKGLLPFRHGVHLSKEQ PKTPQEV+D+RR
Subjt: MDDILLIGNDVGYLTNVKTWLAAQFQMKDFREAQYVLGIQIIRDRKNKMLALSQATYICKMLVRYLMQNSKKGLLPFRHGVHLSKEQFPKTPQEVKDIRR
Query: IFYASVVGSLMYVMLYTRPDICYAVGIISRYQSNPRLDHSMAVKIILKYLRITRDYMLV
I YASVVGSLMYVMLYTRPDICYAVGI+SRYQSNP LDH AVKIILKYLR TRDYMLV
Subjt: IFYASVVGSLMYVMLYTRPDICYAVGIISRYQSNPRLDHSMAVKIILKYLRITRDYMLV
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| KAA0059556.1 gag/pol protein [Cucumis melo var. makuwa] | 3.4e-69 | 87.42 | Show/hide |
Query: MDDILLIGNDVGYLTNVKTWLAAQFQMKDFREAQYVLGIQIIRDRKNKMLALSQATYICKMLVRYLMQNSKKGLLPFRHGVHLSKEQFPKTPQEVKDIRR
MDDILLIGNDVGYLT+VK WLAAQFQMKD EAQYVLGIQIIRDRKNK LALSQATYI KMLVRY MQNSKKGLLPFRHGVHLSKEQ PKTPQEV+D+RR
Subjt: MDDILLIGNDVGYLTNVKTWLAAQFQMKDFREAQYVLGIQIIRDRKNKMLALSQATYICKMLVRYLMQNSKKGLLPFRHGVHLSKEQFPKTPQEVKDIRR
Query: IFYASVVGSLMYVMLYTRPDICYAVGIISRYQSNPRLDHSMAVKIILKYLRITRDYMLV
I YAS VGSLMY ML TRPDICYAVGI+SRYQSNP LDH AVKIILKYL+ TRDYMLV
Subjt: IFYASVVGSLMYVMLYTRPDICYAVGIISRYQSNPRLDHSMAVKIILKYLRITRDYMLV
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| KAA0063766.1 gag/pol protein [Cucumis melo var. makuwa] | 9.9e-69 | 87.42 | Show/hide |
Query: MDDILLIGNDVGYLTNVKTWLAAQFQMKDFREAQYVLGIQIIRDRKNKMLALSQATYICKMLVRYLMQNSKKGLLPFRHGVHLSKEQFPKTPQEVKDIRR
+DDILLIGNDVGYLT+VK WLAAQFQMKD EAQYVLGIQIIRD KNK LALSQATYI KMLVRY MQNSKKGLLPFR+GVHLSKEQ PKTPQ+V+DIRR
Subjt: MDDILLIGNDVGYLTNVKTWLAAQFQMKDFREAQYVLGIQIIRDRKNKMLALSQATYICKMLVRYLMQNSKKGLLPFRHGVHLSKEQFPKTPQEVKDIRR
Query: IFYASVVGSLMYVMLYTRPDICYAVGIISRYQSNPRLDHSMAVKIILKYLRITRDYMLV
I YAS VGSLMYVMLYTRPDICYAV I+SRYQSNPRLDH AVKIILKYLR TRDYMLV
Subjt: IFYASVVGSLMYVMLYTRPDICYAVGIISRYQSNPRLDHSMAVKIILKYLRITRDYMLV
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| TYK05518.1 gag/pol protein [Cucumis melo var. makuwa] | 9.9e-69 | 87.42 | Show/hide |
Query: MDDILLIGNDVGYLTNVKTWLAAQFQMKDFREAQYVLGIQIIRDRKNKMLALSQATYICKMLVRYLMQNSKKGLLPFRHGVHLSKEQFPKTPQEVKDIRR
+DDILLIGNDVGYLT+VK WLAAQFQMKD EAQYVLGIQIIRD KNK LALSQATYI KMLVRY MQNSKKGLLPFR+GVHLSKEQ PKTPQ+V+DIRR
Subjt: MDDILLIGNDVGYLTNVKTWLAAQFQMKDFREAQYVLGIQIIRDRKNKMLALSQATYICKMLVRYLMQNSKKGLLPFRHGVHLSKEQFPKTPQEVKDIRR
Query: IFYASVVGSLMYVMLYTRPDICYAVGIISRYQSNPRLDHSMAVKIILKYLRITRDYMLV
I YAS VGSLMYVMLYTRPDICYAV I+SRYQSNPRLDH AVKIILKYLR TRDYMLV
Subjt: IFYASVVGSLMYVMLYTRPDICYAVGIISRYQSNPRLDHSMAVKIILKYLRITRDYMLV
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TJH9 Putative Integrase core domain | 8.7e-71 | 88.68 | Show/hide |
Query: MDDILLIGNDVGYLTNVKTWLAAQFQMKDFREAQYVLGIQIIRDRKNKMLALSQATYICKMLVRYLMQNSKKGLLPFRHGVHLSKEQFPKTPQEVKDIRR
+DDILLIGNDVGYLT+VK WLAA+FQMKD EAQYVLGIQIIRDRKNK LALSQATYI KMLVRY MQNSKKGLLPFRHGVHLSKEQ PKTPQEV+D+RR
Subjt: MDDILLIGNDVGYLTNVKTWLAAQFQMKDFREAQYVLGIQIIRDRKNKMLALSQATYICKMLVRYLMQNSKKGLLPFRHGVHLSKEQFPKTPQEVKDIRR
Query: IFYASVVGSLMYVMLYTRPDICYAVGIISRYQSNPRLDHSMAVKIILKYLRITRDYMLV
I YASVVGSLMYVMLYTRPDICYAVGI+SRYQSNP LDH AVKIILKYLR TRDYMLV
Subjt: IFYASVVGSLMYVMLYTRPDICYAVGIISRYQSNPRLDHSMAVKIILKYLRITRDYMLV
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| A0A5A7TZD0 Gag/pol protein | 8.2e-69 | 86.16 | Show/hide |
Query: MDDILLIGNDVGYLTNVKTWLAAQFQMKDFREAQYVLGIQIIRDRKNKMLALSQATYICKMLVRYLMQNSKKGLLPFRHGVHLSKEQFPKTPQEVKDIRR
+DDILLIGNDVGYLT+VK WLAAQFQMKD EAQYVLGIQIIRDRKNK LALSQATYI K+LVRY MQNSKKGLLPFRHGVHLSKEQ PKTPQEV+D+RR
Subjt: MDDILLIGNDVGYLTNVKTWLAAQFQMKDFREAQYVLGIQIIRDRKNKMLALSQATYICKMLVRYLMQNSKKGLLPFRHGVHLSKEQFPKTPQEVKDIRR
Query: IFYASVVGSLMYVMLYTRPDICYAVGIISRYQSNPRLDHSMAVKIILKYLRITRDYMLV
I YAS VGSLMY ML TRPDICYAVGI+SRYQSNP LDH AVKI+LKYLR TRDYMLV
Subjt: IFYASVVGSLMYVMLYTRPDICYAVGIISRYQSNPRLDHSMAVKIILKYLRITRDYMLV
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| A0A5A7UZF3 Gag/pol protein | 1.6e-69 | 87.42 | Show/hide |
Query: MDDILLIGNDVGYLTNVKTWLAAQFQMKDFREAQYVLGIQIIRDRKNKMLALSQATYICKMLVRYLMQNSKKGLLPFRHGVHLSKEQFPKTPQEVKDIRR
MDDILLIGNDVGYLT+VK WLAAQFQMKD EAQYVLGIQIIRDRKNK LALSQATYI KMLVRY MQNSKKGLLPFRHGVHLSKEQ PKTPQEV+D+RR
Subjt: MDDILLIGNDVGYLTNVKTWLAAQFQMKDFREAQYVLGIQIIRDRKNKMLALSQATYICKMLVRYLMQNSKKGLLPFRHGVHLSKEQFPKTPQEVKDIRR
Query: IFYASVVGSLMYVMLYTRPDICYAVGIISRYQSNPRLDHSMAVKIILKYLRITRDYMLV
I YAS VGSLMY ML TRPDICYAVGI+SRYQSNP LDH AVKIILKYL+ TRDYMLV
Subjt: IFYASVVGSLMYVMLYTRPDICYAVGIISRYQSNPRLDHSMAVKIILKYLRITRDYMLV
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| A0A5A7VBG2 Gag/pol protein | 4.8e-69 | 87.42 | Show/hide |
Query: MDDILLIGNDVGYLTNVKTWLAAQFQMKDFREAQYVLGIQIIRDRKNKMLALSQATYICKMLVRYLMQNSKKGLLPFRHGVHLSKEQFPKTPQEVKDIRR
+DDILLIGNDVGYLT+VK WLAAQFQMKD EAQYVLGIQIIRD KNK LALSQATYI KMLVRY MQNSKKGLLPFR+GVHLSKEQ PKTPQ+V+DIRR
Subjt: MDDILLIGNDVGYLTNVKTWLAAQFQMKDFREAQYVLGIQIIRDRKNKMLALSQATYICKMLVRYLMQNSKKGLLPFRHGVHLSKEQFPKTPQEVKDIRR
Query: IFYASVVGSLMYVMLYTRPDICYAVGIISRYQSNPRLDHSMAVKIILKYLRITRDYMLV
I YAS VGSLMYVMLYTRPDICYAV I+SRYQSNPRLDH AVKIILKYLR TRDYMLV
Subjt: IFYASVVGSLMYVMLYTRPDICYAVGIISRYQSNPRLDHSMAVKIILKYLRITRDYMLV
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| A0A5D3C2T5 Gag/pol protein | 4.8e-69 | 87.42 | Show/hide |
Query: MDDILLIGNDVGYLTNVKTWLAAQFQMKDFREAQYVLGIQIIRDRKNKMLALSQATYICKMLVRYLMQNSKKGLLPFRHGVHLSKEQFPKTPQEVKDIRR
+DDILLIGNDVGYLT+VK WLAAQFQMKD EAQYVLGIQIIRD KNK LALSQATYI KMLVRY MQNSKKGLLPFR+GVHLSKEQ PKTPQ+V+DIRR
Subjt: MDDILLIGNDVGYLTNVKTWLAAQFQMKDFREAQYVLGIQIIRDRKNKMLALSQATYICKMLVRYLMQNSKKGLLPFRHGVHLSKEQFPKTPQEVKDIRR
Query: IFYASVVGSLMYVMLYTRPDICYAVGIISRYQSNPRLDHSMAVKIILKYLRITRDYMLV
I YAS VGSLMYVMLYTRPDICYAV I+SRYQSNPRLDH AVKIILKYLR TRDYMLV
Subjt: IFYASVVGSLMYVMLYTRPDICYAVGIISRYQSNPRLDHSMAVKIILKYLRITRDYMLV
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 1.9e-14 | 30.86 | Show/hide |
Query: MDDILLIGNDVGYLTNVKTWLAAQFQMKDFREAQYVLGIQIIRDRKNKMLALSQATYICKMLVRYLMQNSKKGLLPFRHGVH---LSKEQFPKTPQEVKD
+DD+++ D+ + N K +L +F+M D E ++ +GI+I + + + LSQ+ Y+ K+L ++ M+N P ++ L+ ++ TP
Subjt: MDDILLIGNDVGYLTNVKTWLAAQFQMKDFREAQYVLGIQIIRDRKNKMLALSQATYICKMLVRYLMQNSKKGLLPFRHGVH---LSKEQFPKTPQEVKD
Query: IRRIFYASVVGSLMYVMLYTRPDICYAVGIISRYQSNPRLDHSMAVKIILKYLRITRDYMLV
S++G LMY+ML TRPD+ AV I+SRY S + +K +L+YL+ T D L+
Subjt: IRRIFYASVVGSLMYVMLYTRPDICYAVGIISRYQSNPRLDHSMAVKIILKYLRITRDYMLV
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 9.4e-30 | 44.44 | Show/hide |
Query: MDDILLIGNDVGYLTNVKTWLAAQFQMKDFREAQYVLGIQIIRDRKNKMLALSQATYICKMLVRYLMQNSKKGLLPFRHGVHLSKEQFPKTPQEVKDIRR
+DD+L++G D G + +K L+ F MKD AQ +LG++I+R+R ++ L LSQ YI ++L R+ M+N+K P + LSK+ P T +E ++ +
Subjt: MDDILLIGNDVGYLTNVKTWLAAQFQMKDFREAQYVLGIQIIRDRKNKMLALSQATYICKMLVRYLMQNSKKGLLPFRHGVHLSKEQFPKTPQEVKDIRR
Query: IFYASVVGSLMYVMLYTRPDICYAVGIISRYQSNPRLDHSMAVKIILKYLRIT
+ Y+S VGSLMY M+ TRPDI +AVG++SR+ NP +H AVK IL+YLR T
Subjt: IFYASVVGSLMYVMLYTRPDICYAVGIISRYQSNPRLDHSMAVKIILKYLRIT
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| P25600 Putative transposon Ty5-1 protein YCL074W | 1.8e-09 | 31.01 | Show/hide |
Query: MDDILLIGNDVGYLTNVKTWLAAQFQMKDFREAQYVLGIQIIRDRKNKMLALSQATYICKMLVRYLMQNSKKGLLPFRHGVHLSKEQFPKTPQEVKDIRR
+DD+L+ VK L + MKD + LG+ I N + LS YI K + K P + SK F T +KDI
Subjt: MDDILLIGNDVGYLTNVKTWLAAQFQMKDFREAQYVLGIQIIRDRKNKMLALSQATYICKMLVRYLMQNSKKGLLPFRHGVHLSKEQFPKTPQEVKDIRR
Query: IFYASVVGSLMYVMLYTRPDICYAVGIISRYQSNPRLDHSMAVKIILKYLRITRDYML
Y S+VG L++ RPDI Y V ++SR+ PR H + + +L+YL TR L
Subjt: IFYASVVGSLMYVMLYTRPDICYAVGIISRYQSNPRLDHSMAVKIILKYLRITRDYML
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 4.2e-14 | 36.54 | Show/hide |
Query: MDDILLIGNDVGYLTNVKTWLAAQFQMKDFREAQYVLGIQIIRDRKNKMLALSQATYICKMLVRYLMQNSKKGLLPFRHGVHLSKEQFPKTPQEVKDIRR
+DDIL+ GND L N L+ +F +KD E Y LGI+ R L LSQ YI +L R M +K P LS K +
Subjt: MDDILLIGNDVGYLTNVKTWLAAQFQMKDFREAQYVLGIQIIRDRKNKMLALSQATYICKMLVRYLMQNSKKGLLPFRHGVHLSKEQFPKTPQEVKDIRR
Query: IFYASVVGSLMYVMLYTRPDICYAVGIISRYQSNPRLDHSMAVKIILKYLRITRDY
Y +VGSL Y + +TRPDI YAV +S++ P +H A+K IL+YL T ++
Subjt: IFYASVVGSLMYVMLYTRPDICYAVGIISRYQSNPRLDHSMAVKIILKYLRITRDY
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 2.5e-14 | 34.62 | Show/hide |
Query: MDDILLIGNDVGYLTNVKTWLAAQFQMKDFREAQYVLGIQIIRDRKNKMLALSQATYICKMLVRYLMQNSKKGLLPFRHGVHLSKEQFPKTPQEVKDIRR
+DDIL+ GND L + L+ +F +K+ + Y LGI+ R + L LSQ Y +L R M +K P L+ K P +
Subjt: MDDILLIGNDVGYLTNVKTWLAAQFQMKDFREAQYVLGIQIIRDRKNKMLALSQATYICKMLVRYLMQNSKKGLLPFRHGVHLSKEQFPKTPQEVKDIRR
Query: IFYASVVGSLMYVMLYTRPDICYAVGIISRYQSNPRLDHSMAVKIILKYLRITRDY
Y +VGSL Y + +TRPD+ YAV +S+Y P DH A+K +L+YL T D+
Subjt: IFYASVVGSLMYVMLYTRPDICYAVGIISRYQSNPRLDHSMAVKIILKYLRITRDY
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