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Cmc08g0224401 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc08g0224401
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionProtein FAR1-RELATED SEQUENCE 4
Genome locationCMiso1.1chr08:14416981..14417750
RNA-Seq ExpressionCmc08g0224401
SyntenyCmc08g0224401
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsIPR018289 - MULE transposase domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035384.1 protein FAR-RED IMPAIRED RESPONSE 1-like [Cucumis melo var. makuwa]3.7e-7277.6Show/hide
Query:  MQASSTVIGNCMIDDFRFMSTDRSIPKEIVHKACTNHGVDISYQKAWRVKEHMVKILH----------------------GTCTALEMDDSGHFKFCFMA
        MQASSTVIGNC+I DFRFMSTDRSIPKEIVHKA TN GV+ISYQKAWRVKEHMVKILH                       TCTALEMDDSGHFKFCFMA
Subjt:  MQASSTVIGNCMIDDFRFMSTDRSIPKEIVHKACTNHGVDISYQKAWRVKEHMVKILH----------------------GTCTALEMDDSGHFKFCFMA

Query:  FGPSIEGWKYYRPIISVDGTFFKCKFGRILFTASSQDGNNQIFPLAFSIVDSEKDASWTWFFEKIQRSFPERANLVIVSDRHL
        FG SIEGWKY R IISVDGTF KCKFG IL  ASSQDGNNQIFPLAF IVD E DASWTWFFEKI+ SF ERANLVIVSDRHL
Subjt:  FGPSIEGWKYYRPIISVDGTFFKCKFGRILFTASSQDGNNQIFPLAFSIVDSEKDASWTWFFEKIQRSFPERANLVIVSDRHL

KAA0036500.1 protein FAR1-RELATED SEQUENCE 4 [Cucumis melo var. makuwa]5.4e-7175.41Show/hide
Query:  MQASSTVIGNCMIDDFRFMSTDRSIPKEIVHKACTNHGVDISYQKAWRVKEHMVKILH----------------------GTCTALEMDDSGHFKFCFMA
        MQASSTVI NC+IDDFRFMSTD SIPKEI HK  TN GV+ISYQKAWR+KEHMVKILH                      GTCTALEMDDSGHFKFCFMA
Subjt:  MQASSTVIGNCMIDDFRFMSTDRSIPKEIVHKACTNHGVDISYQKAWRVKEHMVKILH----------------------GTCTALEMDDSGHFKFCFMA

Query:  FGPSIEGWKYYRPIISVDGTFFKCKFGRILFTASSQDGNNQIFPLAFSIVDSEKDASWTWFFEKIQRSFPERANLVIVSDRHL
        FG SIE WKY  PIIS+DGTF KCKFG IL TASSQDGNNQIFPLAF+IVDSE D SWTWFFEKI+ SF ERANLVIVSDRHL
Subjt:  FGPSIEGWKYYRPIISVDGTFFKCKFGRILFTASSQDGNNQIFPLAFSIVDSEKDASWTWFFEKIQRSFPERANLVIVSDRHL

KAA0037108.1 protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa]3.8e-6472.68Show/hide
Query:  MQASSTVIGNCMIDDFRFMSTDRSIPKEIVHKACTNHGVDISYQKAWRVKEHMVKILH----------------------GTCTALEMDDSGHFKFCFMA
        MQASSTVIGN +IDDFRFMSTDRSIPKEIVHKA TN GV+ISYQKAWR KEHMVKILH                      GTCTALEMDDSGH       
Subjt:  MQASSTVIGNCMIDDFRFMSTDRSIPKEIVHKACTNHGVDISYQKAWRVKEHMVKILH----------------------GTCTALEMDDSGHFKFCFMA

Query:  FGPSIEGWKYYRPIISVDGTFFKCKFGRILFTASSQDGNNQIFPLAFSIVDSEKDASWTWFFEKIQRSFPERANLVIVSDRHL
        F  SI+GWKY RPIISVD TF KCKF  IL  ASSQDGNNQIFPLAF+IVDSE DASWTWFFEKI+ SF ERANLVIVSDRHL
Subjt:  FGPSIEGWKYYRPIISVDGTFFKCKFGRILFTASSQDGNNQIFPLAFSIVDSEKDASWTWFFEKIQRSFPERANLVIVSDRHL

KAA0037251.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]2.3e-6173.96Show/hide
Query:  MLRKYTSVHDCSLRTTQSSHMQASSTVIGNCMIDDFRFMSTDRSIPKEIVHKACTNHGVDISYQKAWRVKEHMVKILH----------------------
        ML+KYTS HDCSL T QS  MQASSTVIGNC+IDDFR MSTD SIPKEIVHKACTN GV+ISYQK WR KEHMVKIL                       
Subjt:  MLRKYTSVHDCSLRTTQSSHMQASSTVIGNCMIDDFRFMSTDRSIPKEIVHKACTNHGVDISYQKAWRVKEHMVKILH----------------------

Query:  GTCTALEMDDSGHFKFCFMAFGPSIEGWKYYRPIISVDGTFFKCKFGRILFTASSQDGNNQIFPLAFSI
        GTCTALEMDDSG FKFCFMAF  SIEGWKY RPIISVDGTF KCKFG IL TASSQDGNNQIFPLAF+I
Subjt:  GTCTALEMDDSGHFKFCFMAFGPSIEGWKYYRPIISVDGTFFKCKFGRILFTASSQDGNNQIFPLAFSI

TYJ95626.1 uncharacterized protein E5676_scaffold104G00450 [Cucumis melo var. makuwa]3.8e-6475.74Show/hide
Query:  MLRKYTSVHDCSLRTTQSSHMQASSTVIGNCMIDDFRFMSTDRSIPKEIVHKACTNHGVDISYQKAWRVKEHMVKILHG---------------------
        MLRKYTS HDCSL T QSSHMQA+STVIGNC+IDDFRFMS D SIPKEIVHKA TN GV+ISY+KAWR KEHMVKILHG                     
Subjt:  MLRKYTSVHDCSLRTTQSSHMQASSTVIGNCMIDDFRFMSTDRSIPKEIVHKACTNHGVDISYQKAWRVKEHMVKILHG---------------------

Query:  -TCTALEMDDSGHFKFCFMAFGPSIEGWKYYRPIISVDGTFFKCKFGRILFTASSQDGNNQIFPLAFSI
         TCTALEMDDSGHFKFCFMAFG SIEGWKY RPIISVDGTF KCKFG IL TASSQD NNQIFPLAF+I
Subjt:  -TCTALEMDDSGHFKFCFMAFGPSIEGWKYYRPIISVDGTFFKCKFGRILFTASSQDGNNQIFPLAFSI

TrEMBL top hitse value%identityAlignment
A0A5A7T2U4 Protein FAR1-RELATED SEQUENCE 4-like1.8e-6472.68Show/hide
Query:  MQASSTVIGNCMIDDFRFMSTDRSIPKEIVHKACTNHGVDISYQKAWRVKEHMVKILH----------------------GTCTALEMDDSGHFKFCFMA
        MQASSTVIGN +IDDFRFMSTDRSIPKEIVHKA TN GV+ISYQKAWR KEHMVKILH                      GTCTALEMDDSGH       
Subjt:  MQASSTVIGNCMIDDFRFMSTDRSIPKEIVHKACTNHGVDISYQKAWRVKEHMVKILH----------------------GTCTALEMDDSGHFKFCFMA

Query:  FGPSIEGWKYYRPIISVDGTFFKCKFGRILFTASSQDGNNQIFPLAFSIVDSEKDASWTWFFEKIQRSFPERANLVIVSDRHL
        F  SI+GWKY RPIISVD TF KCKF  IL  ASSQDGNNQIFPLAF+IVDSE DASWTWFFEKI+ SF ERANLVIVSDRHL
Subjt:  FGPSIEGWKYYRPIISVDGTFFKCKFGRILFTASSQDGNNQIFPLAFSIVDSEKDASWTWFFEKIQRSFPERANLVIVSDRHL

A0A5A7T6M8 DNA/RNA polymerases superfamily protein1.1e-6173.96Show/hide
Query:  MLRKYTSVHDCSLRTTQSSHMQASSTVIGNCMIDDFRFMSTDRSIPKEIVHKACTNHGVDISYQKAWRVKEHMVKILH----------------------
        ML+KYTS HDCSL T QS  MQASSTVIGNC+IDDFR MSTD SIPKEIVHKACTN GV+ISYQK WR KEHMVKIL                       
Subjt:  MLRKYTSVHDCSLRTTQSSHMQASSTVIGNCMIDDFRFMSTDRSIPKEIVHKACTNHGVDISYQKAWRVKEHMVKILH----------------------

Query:  GTCTALEMDDSGHFKFCFMAFGPSIEGWKYYRPIISVDGTFFKCKFGRILFTASSQDGNNQIFPLAFSI
        GTCTALEMDDSG FKFCFMAF  SIEGWKY RPIISVDGTF KCKFG IL TASSQDGNNQIFPLAF+I
Subjt:  GTCTALEMDDSGHFKFCFMAFGPSIEGWKYYRPIISVDGTFFKCKFGRILFTASSQDGNNQIFPLAFSI

A0A5D3B9S0 Uncharacterized protein1.8e-6475.74Show/hide
Query:  MLRKYTSVHDCSLRTTQSSHMQASSTVIGNCMIDDFRFMSTDRSIPKEIVHKACTNHGVDISYQKAWRVKEHMVKILHG---------------------
        MLRKYTS HDCSL T QSSHMQA+STVIGNC+IDDFRFMS D SIPKEIVHKA TN GV+ISY+KAWR KEHMVKILHG                     
Subjt:  MLRKYTSVHDCSLRTTQSSHMQASSTVIGNCMIDDFRFMSTDRSIPKEIVHKACTNHGVDISYQKAWRVKEHMVKILHG---------------------

Query:  -TCTALEMDDSGHFKFCFMAFGPSIEGWKYYRPIISVDGTFFKCKFGRILFTASSQDGNNQIFPLAFSI
         TCTALEMDDSGHFKFCFMAFG SIEGWKY RPIISVDGTF KCKFG IL TASSQD NNQIFPLAF+I
Subjt:  -TCTALEMDDSGHFKFCFMAFGPSIEGWKYYRPIISVDGTFFKCKFGRILFTASSQDGNNQIFPLAFSI

A0A5D3BMN4 Protein FAR1-RELATED SEQUENCE 42.6e-7175.41Show/hide
Query:  MQASSTVIGNCMIDDFRFMSTDRSIPKEIVHKACTNHGVDISYQKAWRVKEHMVKILH----------------------GTCTALEMDDSGHFKFCFMA
        MQASSTVI NC+IDDFRFMSTD SIPKEI HK  TN GV+ISYQKAWR+KEHMVKILH                      GTCTALEMDDSGHFKFCFMA
Subjt:  MQASSTVIGNCMIDDFRFMSTDRSIPKEIVHKACTNHGVDISYQKAWRVKEHMVKILH----------------------GTCTALEMDDSGHFKFCFMA

Query:  FGPSIEGWKYYRPIISVDGTFFKCKFGRILFTASSQDGNNQIFPLAFSIVDSEKDASWTWFFEKIQRSFPERANLVIVSDRHL
        FG SIE WKY  PIIS+DGTF KCKFG IL TASSQDGNNQIFPLAF+IVDSE D SWTWFFEKI+ SF ERANLVIVSDRHL
Subjt:  FGPSIEGWKYYRPIISVDGTFFKCKFGRILFTASSQDGNNQIFPLAFSIVDSEKDASWTWFFEKIQRSFPERANLVIVSDRHL

A0A5D3BZ76 Protein FAR-RED IMPAIRED RESPONSE 1-like1.8e-7277.6Show/hide
Query:  MQASSTVIGNCMIDDFRFMSTDRSIPKEIVHKACTNHGVDISYQKAWRVKEHMVKILH----------------------GTCTALEMDDSGHFKFCFMA
        MQASSTVIGNC+I DFRFMSTDRSIPKEIVHKA TN GV+ISYQKAWRVKEHMVKILH                       TCTALEMDDSGHFKFCFMA
Subjt:  MQASSTVIGNCMIDDFRFMSTDRSIPKEIVHKACTNHGVDISYQKAWRVKEHMVKILH----------------------GTCTALEMDDSGHFKFCFMA

Query:  FGPSIEGWKYYRPIISVDGTFFKCKFGRILFTASSQDGNNQIFPLAFSIVDSEKDASWTWFFEKIQRSFPERANLVIVSDRHL
        FG SIEGWKY R IISVDGTF KCKFG IL  ASSQDGNNQIFPLAF IVD E DASWTWFFEKI+ SF ERANLVIVSDRHL
Subjt:  FGPSIEGWKYYRPIISVDGTFFKCKFGRILFTASSQDGNNQIFPLAFSIVDSEKDASWTWFFEKIQRSFPERANLVIVSDRHL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G49920.1 MuDR family transposase6.1e-1229.84Show/hide
Query:  YQKAWRVKEHMVKILH---GTCTALEMDDSGH------FKFCFMAFGPSIEGWKYYRPIISVDGTFFKCKFGRILFTASSQDGNNQIFPLAFSIVDSEKD
        + +++R+   ++ +LH   G     + D   H      F+  F AF  SI+G+++ RP+I VD      K+   L  AS+ D  NQ FPLAF++      
Subjt:  YQKAWRVKEHMVKILH---GTCTALEMDDSGH------FKFCFMAFGPSIEGWKYYRPIISVDGTFFKCKFGRILFTASSQDGNNQIFPLAFSIVDSEKD

Query:  ASWTWFFEKIQRSFPERANLVIVS
         SW WF  +I+    +R  + ++S
Subjt:  ASWTWFFEKIQRSFPERANLVIVS

AT1G64255.1 MuDR family transposase3.0e-1137.08Show/hide
Query:  FC--FMAFGPSIEGWKYYRPIISVDGTFFKCKFGRILFTASSQDGNNQIFPLAFSIVDSEKDASWTWFFEKIQRSFPERANLVIVSDRH
        FC  F AF  SIEG+++ RP+I VD     C++   L  AS  D  N+ FPLAF++        W WF   I+    +R  L ++S  H
Subjt:  FC--FMAFGPSIEGWKYYRPIISVDGTFFKCKFGRILFTASSQDGNNQIFPLAFSIVDSEKDASWTWFFEKIQRSFPERANLVIVSDRH

AT1G64260.1 MuDR family transposase1.2e-1237.78Show/hide
Query:  DSGHFKFCFMAFGPSIEGWKYYRPIISVDGTFFKCKFGRILFTASSQDGNNQIFPLAFSIVDSEKDASWTWFFEKIQRSFPERANLVIVS
        D   F+  F +F  SIEG+++ RP+I VD      K+   L  AS  D  N+ FPLAF++       SW WFF KI+    +R +L ++S
Subjt:  DSGHFKFCFMAFGPSIEGWKYYRPIISVDGTFFKCKFGRILFTASSQDGNNQIFPLAFSIVDSEKDASWTWFFEKIQRSFPERANLVIVS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTACGAAAATACACTTCTGTTCATGATTGTTCATTGCGTACTACCCAAAGTTCTCACATGCAAGCTTCTTCAACAGTAATTGGCAATTGTATGATAGATGATTTTAG
ATTCATGTCTACTGATCGTTCAATTCCTAAAGAGATTGTGCATAAGGCTTGTACAAATCATGGAGTTGATATAAGTTACCAGAAAGCTTGGAGGGTAAAAGAACATATGG
TAAAGATATTACATGGTACATGCACTGCTTTAGAAATGGATGATAGTGGTCATTTCAAGTTTTGTTTTATGGCTTTTGGTCCATCAATTGAGGGGTGGAAATATTATAGA
CCTATTATTTCTGTTGATGGGACATTTTTTAAGTGTAAGTTTGGTCGCATCCTATTTACAGCTTCATCACAAGATGGTAACAATCAAATCTTCCCTCTTGCTTTTTCCAT
TGTAGATTCTGAAAAAGATGCATCATGGACATGGTTTTTTGAGAAGATACAAAGAAGTTTTCCAGAGCGAGCTAATTTAGTCATTGTTTCTGATAGGCATCTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTACGAAAATACACTTCTGTTCATGATTGTTCATTGCGTACTACCCAAAGTTCTCACATGCAAGCTTCTTCAACAGTAATTGGCAATTGTATGATAGATGATTTTAG
ATTCATGTCTACTGATCGTTCAATTCCTAAAGAGATTGTGCATAAGGCTTGTACAAATCATGGAGTTGATATAAGTTACCAGAAAGCTTGGAGGGTAAAAGAACATATGG
TAAAGATATTACATGGTACATGCACTGCTTTAGAAATGGATGATAGTGGTCATTTCAAGTTTTGTTTTATGGCTTTTGGTCCATCAATTGAGGGGTGGAAATATTATAGA
CCTATTATTTCTGTTGATGGGACATTTTTTAAGTGTAAGTTTGGTCGCATCCTATTTACAGCTTCATCACAAGATGGTAACAATCAAATCTTCCCTCTTGCTTTTTCCAT
TGTAGATTCTGAAAAAGATGCATCATGGACATGGTTTTTTGAGAAGATACAAAGAAGTTTTCCAGAGCGAGCTAATTTAGTCATTGTTTCTGATAGGCATCTTTAG
Protein sequenceShow/hide protein sequence
MLRKYTSVHDCSLRTTQSSHMQASSTVIGNCMIDDFRFMSTDRSIPKEIVHKACTNHGVDISYQKAWRVKEHMVKILHGTCTALEMDDSGHFKFCFMAFGPSIEGWKYYR
PIISVDGTFFKCKFGRILFTASSQDGNNQIFPLAFSIVDSEKDASWTWFFEKIQRSFPERANLVIVSDRHL