CuGenDBv2

Gene ID	Cmc08g0224461
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Genome location	CMiso1.1chr08:14518566..14520230
RNA-Seq Expression	Cmc08g0224461
Synteny	Cmc08g0224461
Gene Ontology terms	GO:0006278 - RNA-dependent DNA biosynthetic process (biological process) GO:0006355 - regulation of transcription, DNA-templated (biological process) GO:0006508 - proteolysis (biological process) GO:0015074 - DNA integration (biological process) GO:0016020 - membrane (cellular component) GO:0003700 - DNA-binding transcription factor activity (molecular function) GO:0003964 - RNA-directed DNA polymerase activity (molecular function) GO:0004190 - aspartic-type endopeptidase activity (molecular function) GO:0008270 - zinc ion binding (molecular function) GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domains	IPR000477 - Reverse transcriptase domain IPR036397 - Ribonuclease H superfamily IPR041373 - Reverse transcriptase, RNase H-like domain IPR041588 - Integrase zinc-binding domain IPR043128 - Reverse transcriptase/Diguanylate cyclase domain IPR043502 - DNA/RNA polymerase superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0037244.1 reverse transcriptase [Cucumis melo var. makuwa]

0.0e+00

97.83

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Query:  MAPAELKELKVQLQELLDKGFFRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
        MAPAELKELKVQLQELLDKGF RPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
Subjt:  MAPAELKELKVQLQELLDKGFFRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
        TAFRSRYGHYEFIVMSFGLTNAP VFMDLMNRVFREFLDTFVIVFIDDILIYSKTE EHE+HLRMVLQTLRDNKLYAKF KCEFWLKQVSFLGHVVSKAG
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYLTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNY THDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYLTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQTPLHQDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLYVPSDSAVKT
        LSRKVSHSAALITRQ PLH+DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAE GQAVEFSLSSDGGLLFERRL VPSDSA+KT
Subjt:  LSRKVSHSAALITRQTPLHQDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLYVPSDSAVKT

Query:  ELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPR
        ELL EAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPR
Subjt:  ELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPR

KAA0040689.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

97.47

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Query:  MAPAELKELKVQLQELLDKGFFRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
        MAPAELKELKVQLQELLDKGF RPS+SPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
Subjt:  MAPAELKELKVQLQELLDKGFFRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
        TAFRSRYGHYEFIVMSFGLTNAP VFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE+HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDP KIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVL VPDGSGSFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYLTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNY THDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYLTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQTPLHQDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLYVPSDSAVKT
        LSRKVSHSAALITRQ PLH+DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFS+SSDGGLLFERRL VPSDSA+KT
Subjt:  LSRKVSHSAALITRQTPLHQDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLYVPSDSAVKT

Query:  ELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPR
        ELL EAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS+CLVCQQVKAPR
Subjt:  ELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPR

KAA0048687.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

97.83

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Query:  MAPAELKELKVQLQELLDKGFFRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
        MAPAELKELKVQLQELLDKGF RPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
Subjt:  MAPAELKELKVQLQELLDKGFFRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
        TAFRSRYGHYEFIVMSFGLTNAP VFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE+HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYLTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNY THDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYLTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQTPLHQDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLYVPSDSAVKT
        LSRKVSHSAALITRQ PLH+DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRL VPSDS VKT
Subjt:  LSRKVSHSAALITRQTPLHQDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLYVPSDSAVKT

Query:  ELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPR
        ELL EAHSSPFSMHPGSTKMY+D+KRVYWWRNMKREVAEFVS+CLVCQQVKAPR
Subjt:  ELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPR

KAA0057672.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

98.01

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Query:  MAPAELKELKVQLQELLDKGFFRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
        MAPAELKELKVQLQELLDKGF RPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG HQLRIKDEDVPK
Subjt:  MAPAELKELKVQLQELLDKGFFRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
        TAFRSRYGHYEFIVMSFGLTNAP VFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE+HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR ATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYLTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNY THDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYLTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQTPLHQDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLYVPSDSAVKT
        LSRKVSHSAALITRQ PLH+DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRL VPSDSAVKT
Subjt:  LSRKVSHSAALITRQTPLHQDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLYVPSDSAVKT

Query:  ELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPR
        ELL EAHSSPFSMHPGSTKMYQDLKR+YWWRNMKREVAEFVSKCLVCQQVKAPR
Subjt:  ELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPR

TYK01613.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

98.01

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Query:  MAPAELKELKVQLQELLDKGFFRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
        MAPAELKELKVQLQELLDKGF RPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
Subjt:  MAPAELKELKVQLQELLDKGFFRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
        TAFRSRYGHYEFIVMSFGLTNAP VFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE+HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQ LKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYLTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNY THDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYLTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQTPLHQDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLYVPSDSAVKT
        LSRKVSHSAALITRQ PLH+DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQ  EFSLSSDGGLLFERRL VPSDSAVKT
Subjt:  LSRKVSHSAALITRQTPLHQDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLYVPSDSAVKT

Query:  ELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPR
        ELL EAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPR
Subjt:  ELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPR

TrEMBL top hits

e value

%identity

Alignment

A0A5A7T190 Reverse transcriptase

0.0e+00

97.83

Show/hide

Query:  MAPAELKELKVQLQELLDKGFFRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
        MAPAELKELKVQLQELLDKGF RPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
Subjt:  MAPAELKELKVQLQELLDKGFFRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
        TAFRSRYGHYEFIVMSFGLTNAP VFMDLMNRVFREFLDTFVIVFIDDILIYSKTE EHE+HLRMVLQTLRDNKLYAKF KCEFWLKQVSFLGHVVSKAG
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYLTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNY THDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYLTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQTPLHQDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLYVPSDSAVKT
        LSRKVSHSAALITRQ PLH+DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAE GQAVEFSLSSDGGLLFERRL VPSDSA+KT
Subjt:  LSRKVSHSAALITRQTPLHQDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLYVPSDSAVKT

Query:  ELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPR
        ELL EAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPR
Subjt:  ELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPR

A0A5A7THE6 Reverse transcriptase

0.0e+00

97.47

Show/hide

Query:  MAPAELKELKVQLQELLDKGFFRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
        MAPAELKELKVQLQELLDKGF RPS+SPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
Subjt:  MAPAELKELKVQLQELLDKGFFRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
        TAFRSRYGHYEFIVMSFGLTNAP VFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE+HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDP KIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVL VPDGSGSFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYLTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNY THDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYLTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQTPLHQDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLYVPSDSAVKT
        LSRKVSHSAALITRQ PLH+DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFS+SSDGGLLFERRL VPSDSA+KT
Subjt:  LSRKVSHSAALITRQTPLHQDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLYVPSDSAVKT

Query:  ELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPR
        ELL EAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS+CLVCQQVKAPR
Subjt:  ELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPR

A0A5A7U330 Reverse transcriptase

0.0e+00

97.83

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Query:  MAPAELKELKVQLQELLDKGFFRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
        MAPAELKELKVQLQELLDKGF RPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
Subjt:  MAPAELKELKVQLQELLDKGFFRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
        TAFRSRYGHYEFIVMSFGLTNAP VFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE+HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYLTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNY THDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYLTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQTPLHQDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLYVPSDSAVKT
        LSRKVSHSAALITRQ PLH+DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRL VPSDS VKT
Subjt:  LSRKVSHSAALITRQTPLHQDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLYVPSDSAVKT

Query:  ELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPR
        ELL EAHSSPFSMHPGSTKMY+D+KRVYWWRNMKREVAEFVS+CLVCQQVKAPR
Subjt:  ELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPR

A0A5A7UP94 Pol protein

0.0e+00

98.01

Show/hide

Query:  MAPAELKELKVQLQELLDKGFFRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
        MAPAELKELKVQLQELLDKGF RPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG HQLRIKDEDVPK
Subjt:  MAPAELKELKVQLQELLDKGFFRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
        TAFRSRYGHYEFIVMSFGLTNAP VFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE+HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR ATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYLTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNY THDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYLTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQTPLHQDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLYVPSDSAVKT
        LSRKVSHSAALITRQ PLH+DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRL VPSDSAVKT
Subjt:  LSRKVSHSAALITRQTPLHQDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLYVPSDSAVKT

Query:  ELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPR
        ELL EAHSSPFSMHPGSTKMYQDLKR+YWWRNMKREVAEFVSKCLVCQQVKAPR
Subjt:  ELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPR

A0A5D3BPI1 Reverse transcriptase

0.0e+00

98.01

Show/hide

Query:  MAPAELKELKVQLQELLDKGFFRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
        MAPAELKELKVQLQELLDKGF RPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
Subjt:  MAPAELKELKVQLQELLDKGFFRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
        TAFRSRYGHYEFIVMSFGLTNAP VFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE+HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQ LKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYLTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNY THDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYLTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQTPLHQDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLYVPSDSAVKT
        LSRKVSHSAALITRQ PLH+DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQ  EFSLSSDGGLLFERRL VPSDSAVKT
Subjt:  LSRKVSHSAALITRQTPLHQDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLYVPSDSAVKT

Query:  ELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPR
        ELL EAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPR
Subjt:  ELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPR

SwissProt top hits

e value

%identity

Alignment

P0CT34 Transposon Tf2-1 polyprotein

4.1e-88

32.38

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Query:  MAPAELKELKVQLQELLDKGFFRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
        + P +++ +  ++ + L  G  R S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++  D  K
Subjt:  MAPAELKELKVQLQELLDKGFFRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
         AFR   G +E++VM +G++ AP  F   +N +  E  ++ V+ ++DDILI+SK+E+EH KH++ VLQ L++  L    +KCEF   QV F+G+ +S+ G
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
         +     I+ V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGK-----VVAYASRQLKSHEQNYLTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP
        G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y P
Subjt:  GCVLMQQGK-----VVAYASRQLKSHEQNYLTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP

Query:  GKANVVADALSRKVSHSAALITRQTPLHQDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--
        G AN +ADALSR       ++    P+ +D E   I          + Q+++    + +++   +ND  L+    L    + VE ++    GLL   +  
Subjt:  GKANVVADALSRKVSHSAALITRQTPLHQDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--

Query:  LYVPSDSAVKTELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQ
        + +P+D+ +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ
Subjt:  LYVPSDSAVKTELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQ

P0CT35 Transposon Tf2-2 polyprotein

4.1e-88

32.38

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Query:  MAPAELKELKVQLQELLDKGFFRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
        + P +++ +  ++ + L  G  R S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++  D  K
Subjt:  MAPAELKELKVQLQELLDKGFFRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
         AFR   G +E++VM +G++ AP  F   +N +  E  ++ V+ ++DDILI+SK+E+EH KH++ VLQ L++  L    +KCEF   QV F+G+ +S+ G
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
         +     I+ V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGK-----VVAYASRQLKSHEQNYLTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP
        G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y P
Subjt:  GCVLMQQGK-----VVAYASRQLKSHEQNYLTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP

Query:  GKANVVADALSRKVSHSAALITRQTPLHQDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--
        G AN +ADALSR       ++    P+ +D E   I          + Q+++    + +++   +ND  L+    L    + VE ++    GLL   +  
Subjt:  GKANVVADALSRKVSHSAALITRQTPLHQDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--

Query:  LYVPSDSAVKTELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQ
        + +P+D+ +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ
Subjt:  LYVPSDSAVKTELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQ

P0CT36 Transposon Tf2-3 polyprotein

4.1e-88

32.38

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Query:  MAPAELKELKVQLQELLDKGFFRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
        + P +++ +  ++ + L  G  R S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++  D  K
Subjt:  MAPAELKELKVQLQELLDKGFFRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
         AFR   G +E++VM +G++ AP  F   +N +  E  ++ V+ ++DDILI+SK+E+EH KH++ VLQ L++  L    +KCEF   QV F+G+ +S+ G
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
         +     I+ V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGK-----VVAYASRQLKSHEQNYLTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP
        G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y P
Subjt:  GCVLMQQGK-----VVAYASRQLKSHEQNYLTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP

Query:  GKANVVADALSRKVSHSAALITRQTPLHQDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--
        G AN +ADALSR       ++    P+ +D E   I          + Q+++    + +++   +ND  L+    L    + VE ++    GLL   +  
Subjt:  GKANVVADALSRKVSHSAALITRQTPLHQDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--

Query:  LYVPSDSAVKTELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQ
        + +P+D+ +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ
Subjt:  LYVPSDSAVKTELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQ

P0CT37 Transposon Tf2-4 polyprotein

4.1e-88

32.38

Show/hide

Query:  MAPAELKELKVQLQELLDKGFFRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
        + P +++ +  ++ + L  G  R S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++  D  K
Subjt:  MAPAELKELKVQLQELLDKGFFRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
         AFR   G +E++VM +G++ AP  F   +N +  E  ++ V+ ++DDILI+SK+E+EH KH++ VLQ L++  L    +KCEF   QV F+G+ +S+ G
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
         +     I+ V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGK-----VVAYASRQLKSHEQNYLTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP
        G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y P
Subjt:  GCVLMQQGK-----VVAYASRQLKSHEQNYLTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP

Query:  GKANVVADALSRKVSHSAALITRQTPLHQDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--
        G AN +ADALSR       ++    P+ +D E   I          + Q+++    + +++   +ND  L+    L    + VE ++    GLL   +  
Subjt:  GKANVVADALSRKVSHSAALITRQTPLHQDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--

Query:  LYVPSDSAVKTELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQ
        + +P+D+ +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ
Subjt:  LYVPSDSAVKTELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQ

P0CT41 Transposon Tf2-12 polyprotein

4.1e-88

32.38

Show/hide

Query:  MAPAELKELKVQLQELLDKGFFRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
        + P +++ +  ++ + L  G  R S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++  D  K
Subjt:  MAPAELKELKVQLQELLDKGFFRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
         AFR   G +E++VM +G++ AP  F   +N +  E  ++ V+ ++DDILI+SK+E+EH KH++ VLQ L++  L    +KCEF   QV F+G+ +S+ G
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
         +     I+ V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGK-----VVAYASRQLKSHEQNYLTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP
        G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y P
Subjt:  GCVLMQQGK-----VVAYASRQLKSHEQNYLTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP

Query:  GKANVVADALSRKVSHSAALITRQTPLHQDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--
        G AN +ADALSR       ++    P+ +D E   I          + Q+++    + +++   +ND  L+    L    + VE ++    GLL   +  
Subjt:  GKANVVADALSRKVSHSAALITRQTPLHQDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--

Query:  LYVPSDSAVKTELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQ
        + +P+D+ +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ
Subjt:  LYVPSDSAVKTELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQ

Arabidopsis top hits

e value

%identity

Alignment

ATMG00860.1 DNA/RNA polymerases superfamily protein

1.4e-27

45.8

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Query:  HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLG--HVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVW
        HL MVLQ    ++ YA   KC F   Q+++LG  H++S  GVS DPAK+EA+ GW  P   +E+R FLGL GYYRRFV+N+ +I  PLT+L +K +   W
Subjt:  HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLG--HVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVW

Query:  SKACEDSFQNLKQKLVTAPVLTVPDGSGSFV
        ++    +F+ LK  + T PVL +PD    FV
Subjt:  SKACEDSFQNLKQKLVTAPVLTVPDGSGSFV

Sequences

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CDS sequence

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ATGGCCCCCGCAGAACTGAAAGAACTGAAGGTACAGTTACAGGAATTGCTTGATAAGGGATTCTTTCGACCGAGCGTGTCACCTTGGGGTGCGCCAGTCTTATTCGTTAA
GAAGAAGGACGGATCGATGCGTCTGTGCATTGACTATAGGGAGTTGAACAAAGTAACCGTAAAGAACAGATATCCCTTGCCCAGGATTGACGATCTATTTGACCAGTTAC
AGGGAGCCACAGTGTTCTCTAAGATTGATCTTCGGTCGGGATACCATCAGCTGAGAATTAAGGATGAGGATGTACCGAAGACAGCATTTCGTTCCAGATATGGACACTAC
GAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGACAGTATTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATCGTGTTTATCGA
CGATATCTTGATATACTCCAAGACGGAGGCCGAACACGAGAAGCATTTACGTATGGTTTTGCAAACACTTCGGGATAATAAGTTATACGCAAAGTTCTCGAAGTGCGAGT
TTTGGCTGAAGCAGGTGTCCTTTCTGGGCCACGTGGTTTCTAAGGCTGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGACCTTCCACAGTT
AGTGAGGTTCGTAGCTTTCTAGGTTTAGCGGGCTATTATCGACGGTTTGTGGAGAACTTCTCTCGTATAGCTACTCCTCTTACTCAGTTGACCAGAAAGGGAGCTCCTTT
TGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGAACCTTAAACAGAAGCTAGTTACCGCACCGGTTCTTACCGTACCTGATGGTTCTGGCAGTTTTGTGATTTATAGTG
ATGCTTCCAAGAAAGGTTTGGGTTGTGTTTTGATGCAGCAGGGTAAGGTGGTCGCTTATGCGTCTCGTCAGCTGAAGAGTCATGAGCAGAACTACCTCACACATGATCTA
GAGTTGGCAGCAGTGGTTTTTGCTTTGAAAATATGGAGGCATTACTTATATGGTGAAAAGATACAGATATTCACGGATCATAAGAGTTTGAAATACTTCTTTACTCAGAA
AGAATTGAATATGAGACAGCGAAGGTGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCGAATGTGGTAGCCGATGCTCTTAGTAGGA
AGGTATCACATTCAGCAGCACTTATTACCCGACAGACCCCATTGCATCAGGATCTCGAGCGGGCTGAGATTGCAGTTTCAGTGGGGGCAGTTACTATGCAGTTAGCCCAG
TTGACGGTACAGCCGACTTTGAGGCAAAGGATCATTGATGCTCAGAGTAACGATCCTTATCTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGCAAGCGGTTGAGTTCTC
ATTATCCTCTGATGGTGGACTTTTGTTCGAGAGACGCCTCTATGTGCCGTCAGATAGTGCAGTTAAGACAGAATTATTATTTGAGGCACACAGTTCCCCATTTTCCATGC
ACCCAGGTAGTACGAAGATGTATCAGGACCTGAAGCGGGTTTATTGGTGGCGTAACATGAAGAGGGAAGTAGCAGAATTTGTTAGTAAATGCCTGGTGTGTCAGCAGGTT
AAGGCACCAAGGTAG

mRNA sequence

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Protein sequence

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MAPAELKELKVQLQELLDKGFFRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHY
EFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTV
SEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYLTHDL
ELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQTPLHQDLERAEIAVSVGAVTMQLAQ
LTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLYVPSDSAVKTELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQV
KAPR

Cmc08g0224461 (gene) of Melon (Charmono) v1.1 genome