; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc08g0224921 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc08g0224921
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionNuclear transcription factor Y subunit
Genome locationCMiso1.1chr08:15407210..15412911
RNA-Seq ExpressionCmc08g0224921
SyntenyCmc08g0224921
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0016602 - CCAAT-binding factor complex (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR001289 - Nuclear transcription factor Y subunit A
IPR018362 - CCAAT-binding factor, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004150466.2 nuclear transcription factor Y subunit A-7 isoform X1 [Cucumis sativus]1.6e-11684.81Show/hide
Query:  MMSSEIECGNRPDCDNQQITNY-TNNSQPCKL----HGGNSTTANMSKEEKRNWAWPKGLVDSEPVPRTSHKEMRITLSGVESTLPYKSRDESTVLPLMN
        MMSSEIEC N PDCDNQQITNY TNNSQPC+L    HG NSTTA M KEEKRNWAWPK LVDS+P  +TS KE+ ITLSGV  TLPYKSRD STVLP MN
Subjt:  MMSSEIECGNRPDCDNQQITNY-TNNSQPCKL----HGGNSTTANMSKEEKRNWAWPKGLVDSEPVPRTSHKEMRITLSGVESTLPYKSRDESTVLPLMN

Query:  NEHYHASTSQPELLTLSMTTDTSYTYHDPSYGGLPSPFEFQTMHNSDYSRMAQARMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKP
        NEHYHASTSQ ELL+LSMT +TSY YHDPSYGGL SPF FQTMHNSDYS     RMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVEN+ISRSQRKP
Subjt:  NEHYHASTSQPELLTLSMTTDTSYTYHDPSYGGLPSPFEFQTMHNSDYSRMAQARMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKP

Query:  YLHESRHLHAMRRERGCGGRFLSKKKKVEASTSLDDDDDGEGSNISLGSESMCNGSNCYQGSQLHLSAYI
        YLHESRHLHAMRRERGCGGRFLSK KK EAS SL DDDDGEGSNISLGSESMCNGS CYQGSQLHLSAYI
Subjt:  YLHESRHLHAMRRERGCGGRFLSKKKKVEASTSLDDDDDGEGSNISLGSESMCNGSNCYQGSQLHLSAYI

XP_008460780.1 PREDICTED: nuclear transcription factor Y subunit A-7-like [Cucumis melo]4.0e-147100Show/hide
Query:  MMSSEIECGNRPDCDNQQITNYTNNSQPCKLHGGNSTTANMSKEEKRNWAWPKGLVDSEPVPRTSHKEMRITLSGVESTLPYKSRDESTVLPLMNNEHYH
        MMSSEIECGNRPDCDNQQITNYTNNSQPCKLHGGNSTTANMSKEEKRNWAWPKGLVDSEPVPRTSHKEMRITLSGVESTLPYKSRDESTVLPLMNNEHYH
Subjt:  MMSSEIECGNRPDCDNQQITNYTNNSQPCKLHGGNSTTANMSKEEKRNWAWPKGLVDSEPVPRTSHKEMRITLSGVESTLPYKSRDESTVLPLMNNEHYH

Query:  ASTSQPELLTLSMTTDTSYTYHDPSYGGLPSPFEFQTMHNSDYSRMAQARMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHES
        ASTSQPELLTLSMTTDTSYTYHDPSYGGLPSPFEFQTMHNSDYSRMAQARMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHES
Subjt:  ASTSQPELLTLSMTTDTSYTYHDPSYGGLPSPFEFQTMHNSDYSRMAQARMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHES

Query:  RHLHAMRRERGCGGRFLSKKKKVEASTSLDDDDDGEGSNISLGSESMCNGSNCYQGSQLHLSAYI
        RHLHAMRRERGCGGRFLSKKKKVEASTSLDDDDDGEGSNISLGSESMCNGSNCYQGSQLHLSAYI
Subjt:  RHLHAMRRERGCGGRFLSKKKKVEASTSLDDDDDGEGSNISLGSESMCNGSNCYQGSQLHLSAYI

XP_022151660.1 nuclear transcription factor Y subunit A-7-like isoform X1 [Momordica charantia]3.7e-8466.55Show/hide
Query:  MMSSEIECGNRPDCDNQQITN-----YTNNSQPCKLHGG------NSTTANMSKEEKRNWAWPKGLVDSEPVPRTSHKEMRITLS----GVESTLPYKSR
        MMSS  E  NRP CDN Q  N      T+NSQ    HGG       +TT  MSKE++ NWAWPKGLV S P P+TS K+M+ T+S    G  +  P KSR
Subjt:  MMSSEIECGNRPDCDNQQITN-----YTNNSQPCKLHGG------NSTTANMSKEEKRNWAWPKGLVDSEPVPRTSHKEMRITLS----GVESTLPYKSR

Query:  DESTVLPLMNNEHYHASTSQPELLTLSMTTDTSYTYHDPSYGGLP-SPFEFQTMHNSDYSRMAQARMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEV
        D S +LPLMNNEH  ASTS  EL+TL MT  TSY YHD   GG+   PF FQT+ NS+YS++A  RMALPLA+AEEPVYVNAKQYHGILRRRQSRAKAEV
Subjt:  DESTVLPLMNNEHYHASTSQPELLTLSMTTDTSYTYHDPSYGGLP-SPFEFQTMHNSDYSRMAQARMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEV

Query:  ENRISRSQRKPYLHESRHLHAMRRERGCGGRFLSKKKKVEASTSLDDDDDGEGSNISLGSESMCNGSNCYQGSQLHLSAYI
        ENRI+RSQ+KPYLHESRHLHAMRRERGCGGRF+SKKKKVE+S S+DDD++  GSNISLGSE M NGS+CY+GS LHLSAYI
Subjt:  ENRISRSQRKPYLHESRHLHAMRRERGCGGRFLSKKKKVEASTSLDDDDDGEGSNISLGSESMCNGSNCYQGSQLHLSAYI

XP_031739714.1 nuclear transcription factor Y subunit A-7 isoform X2 [Cucumis sativus]1.6e-11684.81Show/hide
Query:  MMSSEIECGNRPDCDNQQITNY-TNNSQPCKL----HGGNSTTANMSKEEKRNWAWPKGLVDSEPVPRTSHKEMRITLSGVESTLPYKSRDESTVLPLMN
        MMSSEIEC N PDCDNQQITNY TNNSQPC+L    HG NSTTA M KEEKRNWAWPK LVDS+P  +TS KE+ ITLSGV  TLPYKSRD STVLP MN
Subjt:  MMSSEIECGNRPDCDNQQITNY-TNNSQPCKL----HGGNSTTANMSKEEKRNWAWPKGLVDSEPVPRTSHKEMRITLSGVESTLPYKSRDESTVLPLMN

Query:  NEHYHASTSQPELLTLSMTTDTSYTYHDPSYGGLPSPFEFQTMHNSDYSRMAQARMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKP
        NEHYHASTSQ ELL+LSMT +TSY YHDPSYGGL SPF FQTMHNSDYS     RMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVEN+ISRSQRKP
Subjt:  NEHYHASTSQPELLTLSMTTDTSYTYHDPSYGGLPSPFEFQTMHNSDYSRMAQARMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKP

Query:  YLHESRHLHAMRRERGCGGRFLSKKKKVEASTSLDDDDDGEGSNISLGSESMCNGSNCYQGSQLHLSAYI
        YLHESRHLHAMRRERGCGGRFLSK KK EAS SL DDDDGEGSNISLGSESMCNGS CYQGSQLHLSAYI
Subjt:  YLHESRHLHAMRRERGCGGRFLSKKKKVEASTSLDDDDDGEGSNISLGSESMCNGSNCYQGSQLHLSAYI

XP_031739715.1 nuclear transcription factor Y subunit A-7 isoform X3 [Cucumis sativus]2.0e-9886.22Show/hide
Query:  MSKEEKRNWAWPKGLVDSEPVPRTSHKEMRITLSGVESTLPYKSRDESTVLPLMNNEHYHASTSQPELLTLSMTTDTSYTYHDPSYGGLPSPFEFQTMHN
        M KEEKRNWAWPK LVDS+P  +TS KE+ ITLSGV  TLPYKSRD STVLP MNNEHYHASTSQ ELL+LSMT +TSY YHDPSYGGL SPF FQTMHN
Subjt:  MSKEEKRNWAWPKGLVDSEPVPRTSHKEMRITLSGVESTLPYKSRDESTVLPLMNNEHYHASTSQPELLTLSMTTDTSYTYHDPSYGGLPSPFEFQTMHN

Query:  SDYSRMAQARMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFLSKKKKVEASTSLDDDDDGEGSNI
        SDYS     RMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVEN+ISRSQRKPYLHESRHLHAMRRERGCGGRFLSK KK EAS SL DDDDGEGSNI
Subjt:  SDYSRMAQARMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFLSKKKKVEASTSLDDDDDGEGSNI

Query:  SLGSESMCNGSNCYQGSQLHLSAYI
        SLGSESMCNGS CYQGSQLHLSAYI
Subjt:  SLGSESMCNGSNCYQGSQLHLSAYI

TrEMBL top hitse value%identityAlignment
A0A0A0KWA0 Nuclear transcription factor Y subunit7.9e-11784.81Show/hide
Query:  MMSSEIECGNRPDCDNQQITNY-TNNSQPCKL----HGGNSTTANMSKEEKRNWAWPKGLVDSEPVPRTSHKEMRITLSGVESTLPYKSRDESTVLPLMN
        MMSSEIEC N PDCDNQQITNY TNNSQPC+L    HG NSTTA M KEEKRNWAWPK LVDS+P  +TS KE+ ITLSGV  TLPYKSRD STVLP MN
Subjt:  MMSSEIECGNRPDCDNQQITNY-TNNSQPCKL----HGGNSTTANMSKEEKRNWAWPKGLVDSEPVPRTSHKEMRITLSGVESTLPYKSRDESTVLPLMN

Query:  NEHYHASTSQPELLTLSMTTDTSYTYHDPSYGGLPSPFEFQTMHNSDYSRMAQARMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKP
        NEHYHASTSQ ELL+LSMT +TSY YHDPSYGGL SPF FQTMHNSDYS     RMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVEN+ISRSQRKP
Subjt:  NEHYHASTSQPELLTLSMTTDTSYTYHDPSYGGLPSPFEFQTMHNSDYSRMAQARMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKP

Query:  YLHESRHLHAMRRERGCGGRFLSKKKKVEASTSLDDDDDGEGSNISLGSESMCNGSNCYQGSQLHLSAYI
        YLHESRHLHAMRRERGCGGRFLSK KK EAS SL DDDDGEGSNISLGSESMCNGS CYQGSQLHLSAYI
Subjt:  YLHESRHLHAMRRERGCGGRFLSKKKKVEASTSLDDDDDGEGSNISLGSESMCNGSNCYQGSQLHLSAYI

A0A1S3CEE5 Nuclear transcription factor Y subunit1.9e-147100Show/hide
Query:  MMSSEIECGNRPDCDNQQITNYTNNSQPCKLHGGNSTTANMSKEEKRNWAWPKGLVDSEPVPRTSHKEMRITLSGVESTLPYKSRDESTVLPLMNNEHYH
        MMSSEIECGNRPDCDNQQITNYTNNSQPCKLHGGNSTTANMSKEEKRNWAWPKGLVDSEPVPRTSHKEMRITLSGVESTLPYKSRDESTVLPLMNNEHYH
Subjt:  MMSSEIECGNRPDCDNQQITNYTNNSQPCKLHGGNSTTANMSKEEKRNWAWPKGLVDSEPVPRTSHKEMRITLSGVESTLPYKSRDESTVLPLMNNEHYH

Query:  ASTSQPELLTLSMTTDTSYTYHDPSYGGLPSPFEFQTMHNSDYSRMAQARMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHES
        ASTSQPELLTLSMTTDTSYTYHDPSYGGLPSPFEFQTMHNSDYSRMAQARMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHES
Subjt:  ASTSQPELLTLSMTTDTSYTYHDPSYGGLPSPFEFQTMHNSDYSRMAQARMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHES

Query:  RHLHAMRRERGCGGRFLSKKKKVEASTSLDDDDDGEGSNISLGSESMCNGSNCYQGSQLHLSAYI
        RHLHAMRRERGCGGRFLSKKKKVEASTSLDDDDDGEGSNISLGSESMCNGSNCYQGSQLHLSAYI
Subjt:  RHLHAMRRERGCGGRFLSKKKKVEASTSLDDDDDGEGSNISLGSESMCNGSNCYQGSQLHLSAYI

A0A6J1DBT5 Nuclear transcription factor Y subunit1.8e-8466.55Show/hide
Query:  MMSSEIECGNRPDCDNQQITN-----YTNNSQPCKLHGG------NSTTANMSKEEKRNWAWPKGLVDSEPVPRTSHKEMRITLS----GVESTLPYKSR
        MMSS  E  NRP CDN Q  N      T+NSQ    HGG       +TT  MSKE++ NWAWPKGLV S P P+TS K+M+ T+S    G  +  P KSR
Subjt:  MMSSEIECGNRPDCDNQQITN-----YTNNSQPCKLHGG------NSTTANMSKEEKRNWAWPKGLVDSEPVPRTSHKEMRITLS----GVESTLPYKSR

Query:  DESTVLPLMNNEHYHASTSQPELLTLSMTTDTSYTYHDPSYGGLP-SPFEFQTMHNSDYSRMAQARMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEV
        D S +LPLMNNEH  ASTS  EL+TL MT  TSY YHD   GG+   PF FQT+ NS+YS++A  RMALPLA+AEEPVYVNAKQYHGILRRRQSRAKAEV
Subjt:  DESTVLPLMNNEHYHASTSQPELLTLSMTTDTSYTYHDPSYGGLP-SPFEFQTMHNSDYSRMAQARMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEV

Query:  ENRISRSQRKPYLHESRHLHAMRRERGCGGRFLSKKKKVEASTSLDDDDDGEGSNISLGSESMCNGSNCYQGSQLHLSAYI
        ENRI+RSQ+KPYLHESRHLHAMRRERGCGGRF+SKKKKVE+S S+DDD++  GSNISLGSE M NGS+CY+GS LHLSAYI
Subjt:  ENRISRSQRKPYLHESRHLHAMRRERGCGGRFLSKKKKVEASTSLDDDDDGEGSNISLGSESMCNGSNCYQGSQLHLSAYI

A0A6J1DFC4 Nuclear transcription factor Y subunit1.8e-8466.55Show/hide
Query:  MMSSEIECGNRPDCDNQQITN-----YTNNSQPCKLHGG------NSTTANMSKEEKRNWAWPKGLVDSEPVPRTSHKEMRITLS----GVESTLPYKSR
        MMSS  E  NRP CDN Q  N      T+NSQ    HGG       +TT  MSKE++ NWAWPKGLV S P P+TS K+M+ T+S    G  +  P KSR
Subjt:  MMSSEIECGNRPDCDNQQITN-----YTNNSQPCKLHGG------NSTTANMSKEEKRNWAWPKGLVDSEPVPRTSHKEMRITLS----GVESTLPYKSR

Query:  DESTVLPLMNNEHYHASTSQPELLTLSMTTDTSYTYHDPSYGGLP-SPFEFQTMHNSDYSRMAQARMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEV
        D S +LPLMNNEH  ASTS  EL+TL MT  TSY YHD   GG+   PF FQT+ NS+YS++A  RMALPLA+AEEPVYVNAKQYHGILRRRQSRAKAEV
Subjt:  DESTVLPLMNNEHYHASTSQPELLTLSMTTDTSYTYHDPSYGGLP-SPFEFQTMHNSDYSRMAQARMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEV

Query:  ENRISRSQRKPYLHESRHLHAMRRERGCGGRFLSKKKKVEASTSLDDDDDGEGSNISLGSESMCNGSNCYQGSQLHLSAYI
        ENRI+RSQ+KPYLHESRHLHAMRRERGCGGRF+SKKKKVE+S S+DDD++  GSNISLGSE M NGS+CY+GS LHLSAYI
Subjt:  ENRISRSQRKPYLHESRHLHAMRRERGCGGRFLSKKKKVEASTSLDDDDDGEGSNISLGSESMCNGSNCYQGSQLHLSAYI

A0A6J1EKQ7 Nuclear transcription factor Y subunit8.3e-6658.58Show/hide
Query:  MMSSEIECGNRPDCDNQQITNYTNNSQPCKLHGGNSTTANMSKEEKRNWAWPKGLVDSEPVPRTSHKEMRITLSGV---ESTLPYKSRDESTVLPLMNNE
        MMSS+ +    PD  N Q + +           G  TT  +SKE+K NW WP GLVD+ P P  S KE++ T++     ES +  +S+D S VLPLMNNE
Subjt:  MMSSEIECGNRPDCDNQQITNYTNNSQPCKLHGGNSTTANMSKEEKRNWAWPKGLVDSEPVPRTSHKEMRITLSGV---ESTLPYKSRDESTVLPLMNNE

Query:  HYHASTSQPELLTLSMTTDTSYTYHDPSYGGLPSPFEFQTMHNSDYSRMAQARMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYL
        HYHAST +        TT TSY Y+D  YG L  PF FQT+HNS+Y+     RM LPLAMAEEPVYVNAKQYHGILRRRQSRAKAEV N+ISRSQ+KPYL
Subjt:  HYHASTSQPELLTLSMTTDTSYTYHDPSYGGLPSPFEFQTMHNSDYSRMAQARMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYL

Query:  HESRHLHAMRRERGCGGRFLSKKKKVEASTSLDDDDDGEGSNISLGSESMCNGSNCYQGSQLHLSAYI
        HESRHLHAMRRERGC GRF+SKKK VE   S+   DDG+GSN+S         SNCYQGS+LHLSAYI
Subjt:  HESRHLHAMRRERGCGGRFLSKKKKVEASTSLDDDDDGEGSNISLGSESMCNGSNCYQGSQLHLSAYI

SwissProt top hitse value%identityAlignment
Q84JP1 Nuclear transcription factor Y subunit A-72.2e-2341.27Show/hide
Query:  SHKEMRITLSGVESTLPYKSRDESTVLPLMNNEHYHASTSQPELLTLSMTTDTSYTYHDPSYGGL--PSPFEFQTMHNSDYSRMAQARMALPLAMAEEPV
        SH++     S  +  +P     ES V  L+ ++    ++  P            Y Y DP Y  +  P P  +  +H      + Q  + LP    EEPV
Subjt:  SHKEMRITLSGVESTLPYKSRDESTVLPLMNNEHYHASTSQPELLTLSMTTDTSYTYHDPSYGGL--PSPFEFQTMHNSDYSRMAQARMALPLAMAEEPV

Query:  YVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFLSKKKKVEASTSLDDDDDGEGSNISLGSESMCNGS
        +VNAKQYHGILRRRQSRA+ E +N++ +S RKPYLHESRHLHA+RR RGCGGRFL+ KK+ E     +D    E SN+S G  +M   S
Subjt:  YVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFLSKKKKVEASTSLDDDDDGEGSNISLGSESMCNGS

Q8VY64 Nuclear transcription factor Y subunit A-42.1e-2141.18Show/hide
Query:  STVLPLMNNEHYHASTSQPELLT--------LSMTTDTSYTYHDPSYGGL---PSPFEFQTMHNSDY------------SRMAQARMALPLAMAEEPVYV
        S+V  L +N   HA   +P+  T         S + DT+  Y +P   GL   P P+         Y              M Q  + L     EEPV+V
Subjt:  STVLPLMNNEHYHASTSQPELLT--------LSMTTDTSYTYHDPSYGGL---PSPFEFQTMHNSDY------------SRMAQARMALPLAMAEEPVYV

Query:  NAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFLSKKKK----VEASTSLDDDDDGEGSNISLGSESM
        NAKQYHGILRRRQSRAK E  NR  ++ +KPY+HESRHLHA+RR RGCGGRFL+ KK+     E   +  D++  E S+ SL SE +
Subjt:  NAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFLSKKKK----VEASTSLDDDDDGEGSNISLGSESM

Q93ZH2 Nuclear transcription factor Y subunit A-35.1e-2044.44Show/hide
Query:  NNEHYHASTSQPELLTLSMTTDTSYTYHDPSYGGLPSPFEFQTMH--NSDYSRMAQARMALPLAMAE-EPVYVNAKQYHGILRRRQSRAKAEVENRISRS
        +N    + T  P +       + S+ Y DP YGGL +          N     M   R+ LP  + E +PV+VNAKQYH I+RRRQ RAK E +N++ R+
Subjt:  NNEHYHASTSQPELLTLSMTTDTSYTYHDPSYGGLPSPFEFQTMH--NSDYSRMAQARMALPLAMAE-EPVYVNAKQYHGILRRRQSRAKAEVENRISRS

Query:  QRKPYLHESRHLHAMRRERGCGGRFLSKKKKVEAS
         RKPYLHESRH+HA++R RG GGRFL+ KK ++ S
Subjt:  QRKPYLHESRHLHAMRRERGCGGRFLSKKKKVEAS

Q945M9 Nuclear transcription factor Y subunit A-91.3e-2339.81Show/hide
Query:  TSHKEMRITLSGVESTLPYKSRDESTVLPLMNNEHYHASTSQ----PELLTLSMTTDTSYTYHDPSYGGLPSPFEFQTMHNSDYSRMAQARMALPLAMAE
        T +KE ++T      T P  + D S      N E  H   +Q    P+L+  ++   +S  Y DP Y G+   +    +    Y  M  +RM LP  MA+
Subjt:  TSHKEMRITLSGVESTLPYKSRDESTVLPLMNNEHYHASTSQ----PELLTLSMTTDTSYTYHDPSYGGLPSPFEFQTMHNSDYSRMAQARMALPLAMAE

Query:  EPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFLSK------KKKVEASTSLDDDDDGEGSNISLGSESMCNGSNC
        EPV+VNAKQY  ILRRRQ+RAKAE+E ++ +S RKPYLHESRH HAMRR RG GGRF  K      K+K E  ++         SN   G E+       
Subjt:  EPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFLSK------KKKVEASTSLDDDDDGEGSNISLGSESMCNGSNC

Query:  YQGSQLHLSAY
         QG ++  SAY
Subjt:  YQGSQLHLSAY

Q9LXV5 Nuclear transcription factor Y subunit A-11.8e-2555.64Show/hide
Query:  YHDPSYGGLPSPFEFQTMHNSDYSRMAQARMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFLSKK
        Y DP YGGL   +  Q +    Y  M + R ALPL MA+EPVYVNAKQY GILRRR++RAKAE+E ++ R  RKPYLHESRH HAMRR R  GGRF +KK
Subjt:  YHDPSYGGLPSPFEFQTMHNSDYSRMAQARMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFLSKK

Query:  KKVEASTSLDDDDDGEGS-NISLGSESMCNGSN
         +VEA       D   GS   S GSE +   SN
Subjt:  KKVEASTSLDDDDDGEGS-NISLGSESMCNGSN

Arabidopsis top hitse value%identityAlignment
AT3G20910.1 nuclear factor Y, subunit A99.1e-2539.81Show/hide
Query:  TSHKEMRITLSGVESTLPYKSRDESTVLPLMNNEHYHASTSQ----PELLTLSMTTDTSYTYHDPSYGGLPSPFEFQTMHNSDYSRMAQARMALPLAMAE
        T +KE ++T      T P  + D S      N E  H   +Q    P+L+  ++   +S  Y DP Y G+   +    +    Y  M  +RM LP  MA+
Subjt:  TSHKEMRITLSGVESTLPYKSRDESTVLPLMNNEHYHASTSQ----PELLTLSMTTDTSYTYHDPSYGGLPSPFEFQTMHNSDYSRMAQARMALPLAMAE

Query:  EPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFLSK------KKKVEASTSLDDDDDGEGSNISLGSESMCNGSNC
        EPV+VNAKQY  ILRRRQ+RAKAE+E ++ +S RKPYLHESRH HAMRR RG GGRF  K      K+K E  ++         SN   G E+       
Subjt:  EPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFLSK------KKKVEASTSLDDDDDGEGSNISLGSESMCNGSNC

Query:  YQGSQLHLSAY
         QG ++  SAY
Subjt:  YQGSQLHLSAY

AT5G12840.1 nuclear factor Y, subunit A11.3e-2655.64Show/hide
Query:  YHDPSYGGLPSPFEFQTMHNSDYSRMAQARMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFLSKK
        Y DP YGGL   +  Q +    Y  M + R ALPL MA+EPVYVNAKQY GILRRR++RAKAE+E ++ R  RKPYLHESRH HAMRR R  GGRF +KK
Subjt:  YHDPSYGGLPSPFEFQTMHNSDYSRMAQARMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFLSKK

Query:  KKVEASTSLDDDDDGEGS-NISLGSESMCNGSN
         +VEA       D   GS   S GSE +   SN
Subjt:  KKVEASTSLDDDDDGEGS-NISLGSESMCNGSN

AT5G12840.2 nuclear factor Y, subunit A11.3e-2655.64Show/hide
Query:  YHDPSYGGLPSPFEFQTMHNSDYSRMAQARMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFLSKK
        Y DP YGGL   +  Q +    Y  M + R ALPL MA+EPVYVNAKQY GILRRR++RAKAE+E ++ R  RKPYLHESRH HAMRR R  GGRF +KK
Subjt:  YHDPSYGGLPSPFEFQTMHNSDYSRMAQARMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFLSKK

Query:  KKVEASTSLDDDDDGEGS-NISLGSESMCNGSN
         +VEA       D   GS   S GSE +   SN
Subjt:  KKVEASTSLDDDDDGEGS-NISLGSESMCNGSN

AT5G12840.3 nuclear factor Y, subunit A11.3e-2655.64Show/hide
Query:  YHDPSYGGLPSPFEFQTMHNSDYSRMAQARMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFLSKK
        Y DP YGGL   +  Q +    Y  M + R ALPL MA+EPVYVNAKQY GILRRR++RAKAE+E ++ R  RKPYLHESRH HAMRR R  GGRF +KK
Subjt:  YHDPSYGGLPSPFEFQTMHNSDYSRMAQARMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFLSKK

Query:  KKVEASTSLDDDDDGEGS-NISLGSESMCNGSN
         +VEA       D   GS   S GSE +   SN
Subjt:  KKVEASTSLDDDDDGEGS-NISLGSESMCNGSN

AT5G12840.4 nuclear factor Y, subunit A11.3e-2655.64Show/hide
Query:  YHDPSYGGLPSPFEFQTMHNSDYSRMAQARMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFLSKK
        Y DP YGGL   +  Q +    Y  M + R ALPL MA+EPVYVNAKQY GILRRR++RAKAE+E ++ R  RKPYLHESRH HAMRR R  GGRF +KK
Subjt:  YHDPSYGGLPSPFEFQTMHNSDYSRMAQARMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFLSKK

Query:  KKVEASTSLDDDDDGEGS-NISLGSESMCNGSN
         +VEA       D   GS   S GSE +   SN
Subjt:  KKVEASTSLDDDDDGEGS-NISLGSESMCNGSN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGAGCTCTGAAATAGAATGCGGAAACCGTCCAGATTGTGACAATCAGCAAATCACAAACTACACCAATAATTCTCAACCTTGTAAGTTGCACGGCGGCAATAGCAC
CACTGCCAATATGTCAAAAGAAGAAAAAAGAAATTGGGCTTGGCCCAAGGGCTTGGTTGACAGTGAGCCAGTGCCCAGAACAAGCCATAAGGAAATGCGTATAACTTTGT
CCGGTGTAGAATCAACACTACCATATAAGAGTAGAGATGAATCCACTGTTCTTCCATTGATGAATAATGAACACTATCATGCCTCTACTTCTCAACCAGAGCTTCTTACC
CTTTCAATGACAACCGATACGTCTTATACATACCACGACCCGTCCTATGGAGGACTGCCATCTCCATTTGAATTTCAAACAATGCATAATTCAGATTATAGTAGAATGGC
ACAAGCTAGAATGGCTTTGCCTTTAGCAATGGCGGAAGAACCTGTTTACGTGAATGCGAAGCAGTACCATGGAATTCTACGTCGACGACAATCTCGAGCCAAGGCGGAAG
TCGAAAATAGAATATCCAGATCACAAAGAAAGCCATATCTTCACGAATCCAGACACCTGCACGCCATGAGAAGGGAAAGGGGATGCGGAGGGCGTTTCTTGAGCAAAAAG
AAGAAGGTAGAAGCTTCGACTTCGTTGGATGATGATGATGATGGGGAAGGCAGCAACATTAGTTTAGGCTCTGAATCAATGTGCAATGGCAGCAACTGTTATCAAGGGTC
CCAACTACATTTATCTGCATATATATGA
mRNA sequenceShow/hide mRNA sequence
TCTATGCTTTGTGTTTGCCCATTTGCCACCTGTTACCTTTTTCTCTCCAAAGAAAATTTTCTTTCATTGGGAATCTAGAATTTTCTCCCATCCCAAACACTCATCTCTCT
CTACCCTCTTAACTCTGAGTTCTCTCCCTCTGTATAATTTCTCTGATAGGTTGTGTTTGGTAAGTAGATACATGTTGGGGGCTTTATAAATTTCATTTTCTTTTTTATAA
TCCCAAATTTTCTTGGACTCCAAACACTGTTTTGTGTTGGGAAATTATTTTCACTTTCTTTTGGGATTCTTCCATTTTCTCACACCCCAAACACTGATCTTATCTTCTCT
CCACTAAGATAGTGCGAATGATGAGCTCTGAAATAGAATGCGGAAACCGTCCAGATTGTGACAATCAGCAAATCACAAACTACACCAATAATTCTCAACCTTGTAAGTTG
CACGGCGGCAATAGCACCACTGCCAATATGTCAAAAGAAGAAAAAAGAAATTGGGCTTGGCCCAAGGGCTTGGTTGACAGTGAGCCAGTGCCCAGAACAAGCCATAAGGA
AATGCGTATAACTTTGTCCGGTGTAGAATCAACACTACCATATAAGAGTAGAGATGAATCCACTGTTCTTCCATTGATGAATAATGAACACTATCATGCCTCTACTTCTC
AACCAGAGCTTCTTACCCTTTCAATGACAACCGATACGTCTTATACATACCACGACCCGTCCTATGGAGGACTGCCATCTCCATTTGAATTTCAAACAATGCATAATTCA
GATTATAGTAGAATGGCACAAGCTAGAATGGCTTTGCCTTTAGCAATGGCGGAAGAACCTGTTTACGTGAATGCGAAGCAGTACCATGGAATTCTACGTCGACGACAATC
TCGAGCCAAGGCGGAAGTCGAAAATAGAATATCCAGATCACAAAGAAAGCCATATCTTCACGAATCCAGACACCTGCACGCCATGAGAAGGGAAAGGGGATGCGGAGGGC
GTTTCTTGAGCAAAAAGAAGAAGGTAGAAGCTTCGACTTCGTTGGATGATGATGATGATGGGGAAGGCAGCAACATTAGTTTAGGCTCTGAATCAATGTGCAATGGCAGC
AACTGTTATCAAGGGTCCCAACTACATTTATCTGCATATATATGAATGGTTAGGTGTTCTGGCTTTGGAAATAACTTGTCCCCCCGTTTCTTCCGCTACTTCGAAGATTA
ACACTAAATTAGTAGGACTCAAAAATATATATTTTGTATTTGATCTTTTTAGTTTAAGAGTTTTTCTTTTTTGTGTGAGTGATATATATATATATACACATAATATTGTT
GGGTTTTTTTTTTTAATTTTTTCTTTTAAATGAAATCAGATCAAGAAACCTCAC
Protein sequenceShow/hide protein sequence
MMSSEIECGNRPDCDNQQITNYTNNSQPCKLHGGNSTTANMSKEEKRNWAWPKGLVDSEPVPRTSHKEMRITLSGVESTLPYKSRDESTVLPLMNNEHYHASTSQPELLT
LSMTTDTSYTYHDPSYGGLPSPFEFQTMHNSDYSRMAQARMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFLSKK
KKVEASTSLDDDDDGEGSNISLGSESMCNGSNCYQGSQLHLSAYI