CuGenDBv2

Gene ID	Cmc08g0225021
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Genome location	CMiso1.1chr08:15582411..15584676
RNA-Seq Expression	Cmc08g0225021
Synteny	Cmc08g0225021
Gene Ontology terms	GO:0006278 - RNA-dependent DNA biosynthetic process (biological process) GO:0006508 - proteolysis (biological process) GO:0015074 - DNA integration (biological process) GO:0003676 - nucleic acid binding (molecular function) GO:0003964 - RNA-directed DNA polymerase activity (molecular function) GO:0004190 - aspartic-type endopeptidase activity (molecular function) GO:0008194 - UDP-glycosyltransferase activity (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR000477 - Reverse transcriptase domain IPR001584 - Integrase, catalytic core IPR012337 - Ribonuclease H-like superfamily IPR036397 - Ribonuclease H superfamily IPR041373 - Reverse transcriptase, RNase H-like domain IPR041588 - Integrase zinc-binding domain IPR043128 - Reverse transcriptase/Diguanylate cyclase domain IPR043502 - DNA/RNA polymerase superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0025998.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

96.85

Show/hide

Query:  MVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAMT
        +VMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEA+T
Subjt:  MVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAMT

Query:  NWPRPSTVSEIRSFLGFAGYYRRFVEDFSCIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVA
        NW RPSTVSEIRSFLG AGYYRRFVEDFS IASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVA
Subjt:  NWPRPSTVSEIRSFLGFAGYYRRFVEDFSCIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVA

Query:  YASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALI
        YASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALI
Subjt:  YASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALI

Query:  TKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLTEKRRMVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFT
        TKQTPLLRDFERAEIAVSVGEVTAQLAQL+VQPTLRQKIIAAQL+DPYL EKRR+VETEQGE FSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFT
Subjt:  TKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLTEKRRMVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFT

Query:  MHPGSTKMYQDLRSVYWWRGMKREVADIVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLMKSAHFVPGKSTY
        MHPGSTKMYQDLRSVYWWRGMKR+VAD VSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRL KSAHFVPGKSTY
Subjt:  MHPGSTKMYQDLRSVYWWRGMKREVADIVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLMKSAHFVPGKSTY

Query:  TASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQA
        TASKWGQLYMTEIVRLHGVPVSI+SDRDARFTSKFWKGLQ+ALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQA
Subjt:  TASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQA

Query:  TIGMAPFEALYGKCYRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVG
        TIGMAPFEALYGKC RSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVG
Subjt:  TIGMAPFEALYGKCYRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVG

Query:  PFEILERIGPVAYRLALPPSFAATLHIWWTS
        PFEILERIGPVAYRLALPPSFAA   ++  S
Subjt:  PFEILERIGPVAYRLALPPSFAATLHIWWTS

KAA0050760.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

96.85

Show/hide

Query:  MVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAMT
        +VMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEA+HEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEA+T
Subjt:  MVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAMT

Query:  NWPRPSTVSEIRSFLGFAGYYRRFVEDFSCIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVA
        NWPRPSTVSEIRSFLG AGYYRRFVEDFS IASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVA
Subjt:  NWPRPSTVSEIRSFLGFAGYYRRFVEDFSCIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVA

Query:  YASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALI
        YASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALI
Subjt:  YASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALI

Query:  TKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLTEKRRMVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFT
        TKQTPLLRDFERAEIAVSVGEVTAQLAQL+VQPTLRQKIIAAQL+DPYL EKRR+VETEQGE FSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFT
Subjt:  TKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLTEKRRMVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFT

Query:  MHPGSTKMYQDLRSVYWWRGMKREVADIVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLMKSAHFVPGKSTY
        MHPGSTKMYQDLRSVYWWRGMKR+VAD VSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRL KSAHFVPGKSTY
Subjt:  MHPGSTKMYQDLRSVYWWRGMKREVADIVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLMKSAHFVPGKSTY

Query:  TASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQA
        TASKWGQLYMTEIVRLHGVPVSI+SDRDARFTSKFWKGLQ+ALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQA
Subjt:  TASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQA

Query:  TIGMAPFEALYGKCYRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVG
        TIGMAPFEALYGKC RSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVG
Subjt:  TIGMAPFEALYGKCYRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVG

Query:  PFEILERIGPVAYRLALPPSFAATLHIWWTS
        PFEILERIGPVAYRLALPPSFAA   ++  S
Subjt:  PFEILERIGPVAYRLALPPSFAATLHIWWTS

TYK01576.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

96.85

Show/hide

Query:  MVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAMT
        +VMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEA+T
Subjt:  MVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAMT

Query:  NWPRPSTVSEIRSFLGFAGYYRRFVEDFSCIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVA
        NW RPSTVSEIRSFLG AGYYRRFVEDFS IASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVA
Subjt:  NWPRPSTVSEIRSFLGFAGYYRRFVEDFSCIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVA

Query:  YASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALI
        YASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALI
Subjt:  YASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALI

Query:  TKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLTEKRRMVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFT
        TKQTPLLRDFERAEIAVSVGEVTAQLAQL+VQPTLRQKIIAAQL+DPYL EKRR+VETEQGE FSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFT
Subjt:  TKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLTEKRRMVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFT

Query:  MHPGSTKMYQDLRSVYWWRGMKREVADIVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLMKSAHFVPGKSTY
        MHPGSTKMYQDLRSVYWWRGMKR+VAD VSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRL KSAHFVPGKSTY
Subjt:  MHPGSTKMYQDLRSVYWWRGMKREVADIVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLMKSAHFVPGKSTY

Query:  TASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQA
        TASKWGQLYMTEIVRLHGVPVSI+SDRDARFTSKFWKGLQ+ALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQA
Subjt:  TASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQA

Query:  TIGMAPFEALYGKCYRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVG
        TIGMAPFEALYGKC RSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVG
Subjt:  TIGMAPFEALYGKCYRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVG

Query:  PFEILERIGPVAYRLALPPSFAATLHIWWTS
        PFEILERIGPVAYRLALPPSFAA   ++  S
Subjt:  PFEILERIGPVAYRLALPPSFAATLHIWWTS

TYK06888.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

96.85

Show/hide

Query:  MVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAMT
        +VMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEA+T
Subjt:  MVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAMT

Query:  NWPRPSTVSEIRSFLGFAGYYRRFVEDFSCIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVA
        NW RPSTVSEIRSFLG AGYYRRFVEDFS IASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVA
Subjt:  NWPRPSTVSEIRSFLGFAGYYRRFVEDFSCIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVA

Query:  YASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALI
        YASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALI
Subjt:  YASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALI

Query:  TKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLTEKRRMVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFT
        TKQTPLLRDFERAEIAVSVGEVTAQLAQL+VQPTLRQKIIAAQL+DPYL EKRR+VETEQGE FSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFT
Subjt:  TKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLTEKRRMVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFT

Query:  MHPGSTKMYQDLRSVYWWRGMKREVADIVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLMKSAHFVPGKSTY
        MHPGSTKMYQDLRSVYWWRGMKR+VAD VSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRL KSAHFVPGKSTY
Subjt:  MHPGSTKMYQDLRSVYWWRGMKREVADIVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLMKSAHFVPGKSTY

Query:  TASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQA
        TASKWGQLYMTEIVRLHGVPVSI+SDRDARFTSKFWKGLQ+ALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQA
Subjt:  TASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQA

Query:  TIGMAPFEALYGKCYRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVG
        TIGMAPFEALYGKC RSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVG
Subjt:  TIGMAPFEALYGKCYRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVG

Query:  PFEILERIGPVAYRLALPPSFAATLHIWWTS
        PFEILERIGPVAYRLALPPSFAA   ++  S
Subjt:  PFEILERIGPVAYRLALPPSFAATLHIWWTS

TYK20443.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

96.85

Show/hide

Query:  MVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAMT
        +VMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEA+T
Subjt:  MVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAMT

Query:  NWPRPSTVSEIRSFLGFAGYYRRFVEDFSCIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVA
        NW RPSTVSEIRSFLG AGYYRRFVEDFS IASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVA
Subjt:  NWPRPSTVSEIRSFLGFAGYYRRFVEDFSCIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVA

Query:  YASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALI
        YASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALI
Subjt:  YASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALI

Query:  TKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLTEKRRMVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFT
        TKQTPLLRDFERAEIAVSVGEVTAQLAQL+VQPTLRQKIIAAQL+DPYL EKRR+VETEQGE FSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFT
Subjt:  TKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLTEKRRMVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFT

Query:  MHPGSTKMYQDLRSVYWWRGMKREVADIVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLMKSAHFVPGKSTY
        MHPGSTKMYQDLRSVYWWRGMKR+VAD VSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRL KSAHFVPGKSTY
Subjt:  MHPGSTKMYQDLRSVYWWRGMKREVADIVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLMKSAHFVPGKSTY

Query:  TASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQA
        TASKWGQLYMTEIVRLHGVPVSI+SDRDARFTSKFWKGLQ+ALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQA
Subjt:  TASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQA

Query:  TIGMAPFEALYGKCYRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVG
        TIGMAPFEALYGKC RSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVG
Subjt:  TIGMAPFEALYGKCYRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVG

Query:  PFEILERIGPVAYRLALPPSFAATLHIWWTS
        PFEILERIGPVAYRLALPPSFAA   ++  S
Subjt:  PFEILERIGPVAYRLALPPSFAATLHIWWTS

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SIJ5 Reverse transcriptase

0.0e+00

96.85

Show/hide

Query:  MVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAMT
        +VMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEA+T
Subjt:  MVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAMT

Query:  NWPRPSTVSEIRSFLGFAGYYRRFVEDFSCIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVA
        NW RPSTVSEIRSFLG AGYYRRFVEDFS IASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVA
Subjt:  NWPRPSTVSEIRSFLGFAGYYRRFVEDFSCIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVA

Query:  YASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALI
        YASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALI
Subjt:  YASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALI

Query:  TKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLTEKRRMVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFT
        TKQTPLLRDFERAEIAVSVGEVTAQLAQL+VQPTLRQKIIAAQL+DPYL EKRR+VETEQGE FSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFT
Subjt:  TKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLTEKRRMVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFT

Query:  MHPGSTKMYQDLRSVYWWRGMKREVADIVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLMKSAHFVPGKSTY
        MHPGSTKMYQDLRSVYWWRGMKR+VAD VSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRL KSAHFVPGKSTY
Subjt:  MHPGSTKMYQDLRSVYWWRGMKREVADIVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLMKSAHFVPGKSTY

Query:  TASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQA
        TASKWGQLYMTEIVRLHGVPVSI+SDRDARFTSKFWKGLQ+ALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQA
Subjt:  TASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQA

Query:  TIGMAPFEALYGKCYRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVG
        TIGMAPFEALYGKC RSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVG
Subjt:  TIGMAPFEALYGKCYRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVG

Query:  PFEILERIGPVAYRLALPPSFAATLHIWWTS
        PFEILERIGPVAYRLALPPSFAA   ++  S
Subjt:  PFEILERIGPVAYRLALPPSFAATLHIWWTS

A0A5A7U6G5 Reverse transcriptase

0.0e+00

96.85

Show/hide

Query:  MVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAMT
        +VMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEA+HEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEA+T
Subjt:  MVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAMT

Query:  NWPRPSTVSEIRSFLGFAGYYRRFVEDFSCIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVA
        NWPRPSTVSEIRSFLG AGYYRRFVEDFS IASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVA
Subjt:  NWPRPSTVSEIRSFLGFAGYYRRFVEDFSCIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVA

Query:  YASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALI
        YASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALI
Subjt:  YASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALI

Query:  TKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLTEKRRMVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFT
        TKQTPLLRDFERAEIAVSVGEVTAQLAQL+VQPTLRQKIIAAQL+DPYL EKRR+VETEQGE FSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFT
Subjt:  TKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLTEKRRMVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFT

Query:  MHPGSTKMYQDLRSVYWWRGMKREVADIVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLMKSAHFVPGKSTY
        MHPGSTKMYQDLRSVYWWRGMKR+VAD VSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRL KSAHFVPGKSTY
Subjt:  MHPGSTKMYQDLRSVYWWRGMKREVADIVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLMKSAHFVPGKSTY

Query:  TASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQA
        TASKWGQLYMTEIVRLHGVPVSI+SDRDARFTSKFWKGLQ+ALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQA
Subjt:  TASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQA

Query:  TIGMAPFEALYGKCYRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVG
        TIGMAPFEALYGKC RSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVG
Subjt:  TIGMAPFEALYGKCYRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVG

Query:  PFEILERIGPVAYRLALPPSFAATLHIWWTS
        PFEILERIGPVAYRLALPPSFAA   ++  S
Subjt:  PFEILERIGPVAYRLALPPSFAATLHIWWTS

A0A5A7V2A0 Reverse transcriptase

0.0e+00

96.85

Show/hide

Query:  MVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAMT
        +VMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEA+T
Subjt:  MVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAMT

Query:  NWPRPSTVSEIRSFLGFAGYYRRFVEDFSCIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVA
        NW RPSTVSEIRSFLG AGYYRRFVEDFS IASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVA
Subjt:  NWPRPSTVSEIRSFLGFAGYYRRFVEDFSCIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVA

Query:  YASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALI
        YASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALI
Subjt:  YASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALI

Query:  TKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLTEKRRMVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFT
        TKQTPLLRDFERAEIAVSVGEVTAQLAQL+VQPTLRQKIIAAQL+DPYL EKRR+VETEQGE FSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFT
Subjt:  TKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLTEKRRMVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFT

Query:  MHPGSTKMYQDLRSVYWWRGMKREVADIVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLMKSAHFVPGKSTY
        MHPGSTKMYQDLRSVYWWRGMKR+VAD VSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRL KSAHFVPGKSTY
Subjt:  MHPGSTKMYQDLRSVYWWRGMKREVADIVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLMKSAHFVPGKSTY

Query:  TASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQA
        TASKWGQLYMTEIVRLHGVPVSI+SDRDARFTSKFWKGLQ+ALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQA
Subjt:  TASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQA

Query:  TIGMAPFEALYGKCYRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVG
        TIGMAPFEALYGKC RSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVG
Subjt:  TIGMAPFEALYGKCYRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVG

Query:  PFEILERIGPVAYRLALPPSFAATLHIWWTS
        PFEILERIGPVAYRLALPPSFAA   ++  S
Subjt:  PFEILERIGPVAYRLALPPSFAATLHIWWTS

A0A5D3BTN0 Reverse transcriptase

0.0e+00

96.85

Show/hide

Query:  MVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAMT
        +VMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEA+T
Subjt:  MVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAMT

Query:  NWPRPSTVSEIRSFLGFAGYYRRFVEDFSCIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVA
        NW RPSTVSEIRSFLG AGYYRRFVEDFS IASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVA
Subjt:  NWPRPSTVSEIRSFLGFAGYYRRFVEDFSCIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVA

Query:  YASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALI
        YASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALI
Subjt:  YASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALI

Query:  TKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLTEKRRMVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFT
        TKQTPLLRDFERAEIAVSVGEVTAQLAQL+VQPTLRQKIIAAQL+DPYL EKRR+VETEQGE FSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFT
Subjt:  TKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLTEKRRMVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFT

Query:  MHPGSTKMYQDLRSVYWWRGMKREVADIVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLMKSAHFVPGKSTY
        MHPGSTKMYQDLRSVYWWRGMKR+VAD VSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRL KSAHFVPGKSTY
Subjt:  MHPGSTKMYQDLRSVYWWRGMKREVADIVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLMKSAHFVPGKSTY

Query:  TASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQA
        TASKWGQLYMTEIVRLHGVPVSI+SDRDARFTSKFWKGLQ+ALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQA
Subjt:  TASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQA

Query:  TIGMAPFEALYGKCYRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVG
        TIGMAPFEALYGKC RSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVG
Subjt:  TIGMAPFEALYGKCYRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVG

Query:  PFEILERIGPVAYRLALPPSFAATLHIWWTS
        PFEILERIGPVAYRLALPPSFAA   ++  S
Subjt:  PFEILERIGPVAYRLALPPSFAATLHIWWTS

A0A5D3C6W3 Reverse transcriptase

0.0e+00

96.85

Show/hide

Query:  MVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAMT
        +VMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEA+T
Subjt:  MVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAMT

Query:  NWPRPSTVSEIRSFLGFAGYYRRFVEDFSCIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVA
        NW RPSTVSEIRSFLG AGYYRRFVEDFS IASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVA
Subjt:  NWPRPSTVSEIRSFLGFAGYYRRFVEDFSCIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVA

Query:  YASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALI
        YASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALI
Subjt:  YASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALI

Query:  TKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLTEKRRMVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFT
        TKQTPLLRDFERAEIAVSVGEVTAQLAQL+VQPTLRQKIIAAQL+DPYL EKRR+VETEQGE FSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFT
Subjt:  TKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLTEKRRMVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFT

Query:  MHPGSTKMYQDLRSVYWWRGMKREVADIVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLMKSAHFVPGKSTY
        MHPGSTKMYQDLRSVYWWRGMKR+VAD VSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRL KSAHFVPGKSTY
Subjt:  MHPGSTKMYQDLRSVYWWRGMKREVADIVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLMKSAHFVPGKSTY

Query:  TASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQA
        TASKWGQLYMTEIVRLHGVPVSI+SDRDARFTSKFWKGLQ+ALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQA
Subjt:  TASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQA

Query:  TIGMAPFEALYGKCYRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVG
        TIGMAPFEALYGKC RSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVG
Subjt:  TIGMAPFEALYGKCYRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVG

Query:  PFEILERIGPVAYRLALPPSFAATLHIWWTS
        PFEILERIGPVAYRLALPPSFAA   ++  S
Subjt:  PFEILERIGPVAYRLALPPSFAATLHIWWTS

SwissProt top hits

e value

%identity

Alignment

P0CT34 Transposon Tf2-1 polyprotein

4.0e-107

32.09

Show/hide

Query:  MVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAMT
        +VM +G++ APA F   +N +  +  +S V+ ++DDILI+SK+E+EH +H+  VL+ L+   L    +KCEF   +V F+G+ +S +G +     I+ + 
Subjt:  MVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAMT

Query:  NWPRPSTVSEIRSFLGFAGYYRRFVEDFSCIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK---
         W +P    E+R FLG   Y R+F+   S +  PL  L +K   + W+P   ++ + +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+     
Subjt:  NWPRPSTVSEIRSFLGFAGYYRRFVEDFSCIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK---

Query:  --VVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSR
           V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR
Subjt:  --VVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSR

Query:  KVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYL-----TEKRRMVETEQGEDFSISSDDGLMFEGR--LCVPEDS
               ++ +  P+ +D E   I          + Q+S+    + +++    ND  L      E +R+ E       +I   DGL+   +  + +P D+
Subjt:  KVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYL-----TEKRRMVETEQGEDFSISSDDGLMFEGR--LCVPEDS

Query:  AVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADIVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVV
         +   ++ + H     +HPG   +   +   + W+G+++++ + V  C  CQ  K+    P G LQP+      WES+SMDFIT LP++  GY  ++VVV
Subjt:  AVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADIVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVV

Query:  DRLMKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWD
        DR  K A  VP   + TA +  +++   ++   G P  II+D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR        +W 
Subjt:  DRLMKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWD

Query:  SHLHLMEFAYNNSYQATIGMAPFEALYGKCYRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMK
         H+ L++ +YNN+  +   M PFE ++   Y   +   E+        E  Q T    Q ++  + T   + K Y D++ +++ EF+ GD+V +K     
Subjt:  SHLHLMEFAYNNSYQATIGMAPFEALYGKCYRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMK

Query:  GVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPS----FAATLHI
        G L   K  KL+P F GPF +L++ GP  Y L LP S    F++T H+
Subjt:  GVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPS----FAATLHI

P0CT35 Transposon Tf2-2 polyprotein

4.0e-107

32.09

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Query:  MVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAMT
        +VM +G++ APA F   +N +  +  +S V+ ++DDILI+SK+E+EH +H+  VL+ L+   L    +KCEF   +V F+G+ +S +G +     I+ + 
Subjt:  MVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAMT

Query:  NWPRPSTVSEIRSFLGFAGYYRRFVEDFSCIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK---
         W +P    E+R FLG   Y R+F+   S +  PL  L +K   + W+P   ++ + +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+     
Subjt:  NWPRPSTVSEIRSFLGFAGYYRRFVEDFSCIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK---

Query:  --VVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSR
           V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR
Subjt:  --VVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSR

Query:  KVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYL-----TEKRRMVETEQGEDFSISSDDGLMFEGR--LCVPEDS
               ++ +  P+ +D E   I          + Q+S+    + +++    ND  L      E +R+ E       +I   DGL+   +  + +P D+
Subjt:  KVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYL-----TEKRRMVETEQGEDFSISSDDGLMFEGR--LCVPEDS

Query:  AVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADIVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVV
         +   ++ + H     +HPG   +   +   + W+G+++++ + V  C  CQ  K+    P G LQP+      WES+SMDFIT LP++  GY  ++VVV
Subjt:  AVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADIVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVV

Query:  DRLMKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWD
        DR  K A  VP   + TA +  +++   ++   G P  II+D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR        +W 
Subjt:  DRLMKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWD

Query:  SHLHLMEFAYNNSYQATIGMAPFEALYGKCYRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMK
         H+ L++ +YNN+  +   M PFE ++   Y   +   E+        E  Q T    Q ++  + T   + K Y D++ +++ EF+ GD+V +K     
Subjt:  SHLHLMEFAYNNSYQATIGMAPFEALYGKCYRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMK

Query:  GVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPS----FAATLHI
        G L   K  KL+P F GPF +L++ GP  Y L LP S    F++T H+
Subjt:  GVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPS----FAATLHI

P0CT36 Transposon Tf2-3 polyprotein

4.0e-107

32.09

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Query:  MVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAMT
        +VM +G++ APA F   +N +  +  +S V+ ++DDILI+SK+E+EH +H+  VL+ L+   L    +KCEF   +V F+G+ +S +G +     I+ + 
Subjt:  MVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAMT

Query:  NWPRPSTVSEIRSFLGFAGYYRRFVEDFSCIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK---
         W +P    E+R FLG   Y R+F+   S +  PL  L +K   + W+P   ++ + +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+     
Subjt:  NWPRPSTVSEIRSFLGFAGYYRRFVEDFSCIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK---

Query:  --VVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSR
           V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR
Subjt:  --VVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSR

Query:  KVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYL-----TEKRRMVETEQGEDFSISSDDGLMFEGR--LCVPEDS
               ++ +  P+ +D E   I          + Q+S+    + +++    ND  L      E +R+ E       +I   DGL+   +  + +P D+
Subjt:  KVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYL-----TEKRRMVETEQGEDFSISSDDGLMFEGR--LCVPEDS

Query:  AVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADIVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVV
         +   ++ + H     +HPG   +   +   + W+G+++++ + V  C  CQ  K+    P G LQP+      WES+SMDFIT LP++  GY  ++VVV
Subjt:  AVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADIVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVV

Query:  DRLMKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWD
        DR  K A  VP   + TA +  +++   ++   G P  II+D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR        +W 
Subjt:  DRLMKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWD

Query:  SHLHLMEFAYNNSYQATIGMAPFEALYGKCYRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMK
         H+ L++ +YNN+  +   M PFE ++   Y   +   E+        E  Q T    Q ++  + T   + K Y D++ +++ EF+ GD+V +K     
Subjt:  SHLHLMEFAYNNSYQATIGMAPFEALYGKCYRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMK

Query:  GVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPS----FAATLHI
        G L   K  KL+P F GPF +L++ GP  Y L LP S    F++T H+
Subjt:  GVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPS----FAATLHI

P0CT37 Transposon Tf2-4 polyprotein

4.0e-107

32.09

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Query:  MVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAMT
        +VM +G++ APA F   +N +  +  +S V+ ++DDILI+SK+E+EH +H+  VL+ L+   L    +KCEF   +V F+G+ +S +G +     I+ + 
Subjt:  MVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAMT

Query:  NWPRPSTVSEIRSFLGFAGYYRRFVEDFSCIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK---
         W +P    E+R FLG   Y R+F+   S +  PL  L +K   + W+P   ++ + +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+     
Subjt:  NWPRPSTVSEIRSFLGFAGYYRRFVEDFSCIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK---

Query:  --VVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSR
           V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR
Subjt:  --VVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSR

Query:  KVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYL-----TEKRRMVETEQGEDFSISSDDGLMFEGR--LCVPEDS
               ++ +  P+ +D E   I          + Q+S+    + +++    ND  L      E +R+ E       +I   DGL+   +  + +P D+
Subjt:  KVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYL-----TEKRRMVETEQGEDFSISSDDGLMFEGR--LCVPEDS

Query:  AVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADIVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVV
         +   ++ + H     +HPG   +   +   + W+G+++++ + V  C  CQ  K+    P G LQP+      WES+SMDFIT LP++  GY  ++VVV
Subjt:  AVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADIVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVV

Query:  DRLMKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWD
        DR  K A  VP   + TA +  +++   ++   G P  II+D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR        +W 
Subjt:  DRLMKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWD

Query:  SHLHLMEFAYNNSYQATIGMAPFEALYGKCYRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMK
         H+ L++ +YNN+  +   M PFE ++   Y   +   E+        E  Q T    Q ++  + T   + K Y D++ +++ EF+ GD+V +K     
Subjt:  SHLHLMEFAYNNSYQATIGMAPFEALYGKCYRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMK

Query:  GVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPS----FAATLHI
        G L   K  KL+P F GPF +L++ GP  Y L LP S    F++T H+
Subjt:  GVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPS----FAATLHI

P0CT41 Transposon Tf2-12 polyprotein

4.0e-107

32.09

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Query:  MVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAMT
        +VM +G++ APA F   +N +  +  +S V+ ++DDILI+SK+E+EH +H+  VL+ L+   L    +KCEF   +V F+G+ +S +G +     I+ + 
Subjt:  MVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAMT

Query:  NWPRPSTVSEIRSFLGFAGYYRRFVEDFSCIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK---
         W +P    E+R FLG   Y R+F+   S +  PL  L +K   + W+P   ++ + +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+     
Subjt:  NWPRPSTVSEIRSFLGFAGYYRRFVEDFSCIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK---

Query:  --VVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSR
           V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR
Subjt:  --VVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSR

Query:  KVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYL-----TEKRRMVETEQGEDFSISSDDGLMFEGR--LCVPEDS
               ++ +  P+ +D E   I          + Q+S+    + +++    ND  L      E +R+ E       +I   DGL+   +  + +P D+
Subjt:  KVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYL-----TEKRRMVETEQGEDFSISSDDGLMFEGR--LCVPEDS

Query:  AVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADIVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVV
         +   ++ + H     +HPG   +   +   + W+G+++++ + V  C  CQ  K+    P G LQP+      WES+SMDFIT LP++  GY  ++VVV
Subjt:  AVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADIVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVV

Query:  DRLMKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWD
        DR  K A  VP   + TA +  +++   ++   G P  II+D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR        +W 
Subjt:  DRLMKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWD

Query:  SHLHLMEFAYNNSYQATIGMAPFEALYGKCYRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMK
         H+ L++ +YNN+  +   M PFE ++   Y   +   E+        E  Q T    Q ++  + T   + K Y D++ +++ EF+ GD+V +K     
Subjt:  SHLHLMEFAYNNSYQATIGMAPFEALYGKCYRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMK

Query:  GVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPS----FAATLHI
        G L   K  KL+P F GPF +L++ GP  Y L LP S    F++T H+
Subjt:  GVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPS----FAATLHI

Arabidopsis top hits

e value

%identity

Alignment

ATMG00860.1 DNA/RNA polymerases superfamily protein

2.7e-26

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Query:  HLHQVLETLRANKLYAKFSKCEFWLRKVTFLG--HVVSSEGVSVDPAKIEAMTNWPRPSTVSEIRSFLGFAGYYRRFVEDFSCIASPLTQLTRKGTPFVW
        HL  VL+    ++ YA   KC F   ++ +LG  H++S EGVS DPAK+EAM  WP P   +E+R FLG  GYYRRFV+++  I  PLT+L +K +   W
Subjt:  HLHQVLETLRANKLYAKFSKCEFWLRKVTFLG--HVVSSEGVSVDPAKIEAMTNWPRPSTVSEIRSFLGFAGYYRRFVEDFSCIASPLTQLTRKGTPFVW

Query:  SPACERSFQELKQKLVTAPVLTVPD
        +     +F+ LK  + T PVL +PD
Subjt:  SPACERSFQELKQKLVTAPVLTVPD

Sequences

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CDS sequence

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ATGGTGATGTCTTTCGGCTTGACTAACGCTCCTGCAGTGTTCATGGATTTGATGAACAGGGTGTTTAAGGACTTTCTAGACTCGTTCGTCATAGTCTTCATTGATGACAT
CCTGATTTACTCAAAAACTGAGGCTGAGCACGAGGAGCACTTACACCAGGTCTTGGAGACCCTTCGAGCCAACAAGTTGTATGCCAAGTTCTCCAAGTGTGAATTCTGGT
TAAGGAAGGTGACGTTTCTTGGCCACGTGGTTTCCAGTGAGGGAGTTTCAGTAGATCCCGCAAAAATTGAAGCGATGACCAACTGGCCTCGACCGTCCACGGTTAGTGAA
ATTCGAAGTTTTCTGGGCTTCGCAGGTTACTACAGGAGGTTCGTGGAAGACTTCTCATGTATAGCCAGCCCGTTGACCCAGTTGACCAGGAAGGGAACCCCTTTTGTCTG
GAGCCCAGCATGCGAGAGGAGCTTTCAGGAGCTCAAACAGAAGCTAGTGACTGCACCAGTCCTGACAGTGCCCGATGGTTCGGGAAACTTTGTGATCTATAGTGATGCCT
CCAAGAAGGGACTGGGCTGTGTCCTGATGCAGCAAGGTAAGGTAGTTGCTTATGCCTCCCGCCAGTTGAAGATTCATGAGCAGAACTACCCTACCCACGACTTGGAGTTG
GCAGCTGTAGTCTTTGCACTGAAGATATGGAGGCACTATCTGTACGGTGAGAAGATTCAGATTTACACCGACCATAAGAGCCTGAAGTACTTCTTCACTCAGAAGGAGTT
GAACATGAGGCAGAGAAGGTGGCTCGAGTTGGTGAAAGACTACGACTGCGAGATCCTATACCACCCAGGTAAAGCAAATGTAGTGGCTGACGCGCTAAGTAGGAAGGTGG
CACATTCAGCAGCGCTAATCACCAAGCAGACCCCCTTACTCAGGGATTTTGAGAGAGCCGAGATCGCAGTCTCAGTAGGTGAGGTTACCGCACAGTTGGCTCAGTTGTCA
GTTCAGCCAACCTTGAGGCAAAAGATCATCGCTGCTCAGCTGAATGATCCTTACTTGACAGAGAAGCGTCGTATGGTAGAGACAGAGCAAGGTGAAGACTTCTCCATATC
CTCTGACGATGGCCTTATGTTTGAGGGACGCCTGTGTGTGCCGGAAGACAGCGCAGTTAAGACGGAGCTTTTGACTGAGGCTCACAGTTCCCCGTTTACCATGCACCCTG
GGAGTACGAAGATGTACCAGGACTTAAGGAGTGTCTATTGGTGGAGGGGCATGAAGAGGGAAGTGGCAGACATTGTCAGTAGGTGCTTGGTGTGCCAGCAGGTGAAGGCA
CCTAGGCAGCATCCAGCAGGGTTGTTGCAACCCTTGAGTGTGCCAGGGTGGAAGTGGGAGAGTGTGTCGATGGATTTTATTACGGGACTGCCCAAGACCCTAAAGGGCTA
CACGGTGATCTGGGTTGTGGTCGACAGACTCATGAAGTCGGCCCATTTCGTGCCAGGGAAGTCCACTTACACTGCCAGTAAGTGGGGGCAGTTATATATGACAGAGATTG
TGAGACTACATGGAGTACCCGTATCCATCATTTCAGACAGAGACGCTCGTTTCACATCGAAGTTCTGGAAGGGACTTCAACTTGCATTAGGTACGAGGCTGGACTTCAGC
ACGGCATTCCACCCTCAGACTGATGGTCAGACAGAGAGATTGAACCAGATTTTGGAAGATATGCTGCGGGCCTGCGTGCTAGAGTTTTCAGGAAGTTGGGACTCCCATCT
GCATCTGATGGAGTTTGCCTATAACAACAGCTACCAGGCTACTATCGGTATGGCACCGTTCGAGGCTCTGTATGGCAAGTGCTATAGATCCCCTGTCTGCTGGGGCGAGG
TTGGAGAGCAGAGGATGCTAGGCCCCGAGTTAGTGCAGACTACCAACGCAGCCATACAGAAGATCCGAGCTCGTATGCTGACAGCACAGAGCAGACAGAAGAGTTATGCT
GATGTACGACGTAAGGACCTCGAGTTTGAAGTGGGAGATATGGTCTTTCTGAAGGTTGCACCCATGAAGGGTGTTCTGAGGTTCGCGAAGAAGGGGAAGCTGAGTCCACG
CTTCGTAGGGCCGTTCGAGATACTGGAGCGGATTGGCCCCGTGGCTTATCGCTTGGCGCTACCCCCATCTTTTGCTGCAACCCTACACATATGGTGGACTTCGAGCCACT
GCAGATTAGCGAGAACTTGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

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MVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAMTNWPRPSTVSE
IRSFLGFAGYYRRFVEDFSCIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLEL
AAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLS
VQPTLRQKIIAAQLNDPYLTEKRRMVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADIVSRCLVCQQVKA
PRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLMKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFS
TAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCYRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYA
DVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAATLHIWWTSSHCRLART

Cmc08g0225021 (gene) of Melon (Charmono) v1.1 genome