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Cmc08g0225061 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc08g0225061
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionKH domain-containing protein
Genome locationCMiso1.1chr08:15725645..15725983
RNA-Seq ExpressionCmc08g0225061
SyntenyCmc08g0225061
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR036612 - K Homology domain, type 1 superfamily
IPR045071 - KH domain-containing BBP-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYJ96583.1 KH domain-containing protein [Cucumis melo var. makuwa]1.4e-2575.29Show/hide
Query:  QPRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPMDTYPNVNSIKKCLCMRFLKSFQNFNFVGRLLGPRGNSLKRVEATTRCRV
        +PRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIP+DTYP                  NFNFVGRLLGPRGNSLKRVEATT CRV
Subjt:  QPRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPMDTYPNVNSIKKCLCMRFLKSFQNFNFVGRLLGPRGNSLKRVEATTRCRV

TYK24899.1 KH domain-containing protein [Cucumis melo var. makuwa]1.4e-2575.29Show/hide
Query:  QPRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPMDTYPNVNSIKKCLCMRFLKSFQNFNFVGRLLGPRGNSLKRVEATTRCRV
        +PRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIP+DTYP                  NFNFVGRLLGPRGNSLKRVEATT CRV
Subjt:  QPRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPMDTYPNVNSIKKCLCMRFLKSFQNFNFVGRLLGPRGNSLKRVEATTRCRV

XP_004137670.3 KH domain-containing protein At3g08620 [Cucumis sativus]1.4e-2575.29Show/hide
Query:  QPRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPMDTYPNVNSIKKCLCMRFLKSFQNFNFVGRLLGPRGNSLKRVEATTRCRV
        +PRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIP+DTYP                  NFNFVGRLLGPRGNSLKRVEATT CRV
Subjt:  QPRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPMDTYPNVNSIKKCLCMRFLKSFQNFNFVGRLLGPRGNSLKRVEATTRCRV

XP_038905002.1 KH domain-containing protein At3g08620-like isoform X1 [Benincasa hispida]1.4e-2575.29Show/hide
Query:  QPRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPMDTYPNVNSIKKCLCMRFLKSFQNFNFVGRLLGPRGNSLKRVEATTRCRV
        +PRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIP+DTYP                  NFNFVGRLLGPRGNSLKRVEATT CRV
Subjt:  QPRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPMDTYPNVNSIKKCLCMRFLKSFQNFNFVGRLLGPRGNSLKRVEATTRCRV

XP_038905003.1 KH domain-containing protein At2g38610-like isoform X2 [Benincasa hispida]1.4e-2575.29Show/hide
Query:  QPRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPMDTYPNVNSIKKCLCMRFLKSFQNFNFVGRLLGPRGNSLKRVEATTRCRV
        +PRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIP+DTYP                  NFNFVGRLLGPRGNSLKRVEATT CRV
Subjt:  QPRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPMDTYPNVNSIKKCLCMRFLKSFQNFNFVGRLLGPRGNSLKRVEATTRCRV

TrEMBL top hitse value%identityAlignment
A0A0A0LCK8 KH domain-containing protein6.8e-2675.29Show/hide
Query:  QPRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPMDTYPNVNSIKKCLCMRFLKSFQNFNFVGRLLGPRGNSLKRVEATTRCRV
        +PRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIP+DTYP                  NFNFVGRLLGPRGNSLKRVEATT CRV
Subjt:  QPRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPMDTYPNVNSIKKCLCMRFLKSFQNFNFVGRLLGPRGNSLKRVEATTRCRV

A0A5A7SID7 KH domain-containing protein8.9e-2675.29Show/hide
Query:  QPRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPMDTYPNVNSIKKCLCMRFLKSFQNFNFVGRLLGPRGNSLKRVEATTRCRV
        +PRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIP+DTYP                  NFNFVGRLLGPRGNSLKRVEATT CRV
Subjt:  QPRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPMDTYPNVNSIKKCLCMRFLKSFQNFNFVGRLLGPRGNSLKRVEATTRCRV

A0A5A7TS75 KH domain-containing protein6.8e-2675.29Show/hide
Query:  QPRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPMDTYPNVNSIKKCLCMRFLKSFQNFNFVGRLLGPRGNSLKRVEATTRCRV
        +PRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIP+DTYP                  NFNFVGRLLGPRGNSLKRVEATT CRV
Subjt:  QPRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPMDTYPNVNSIKKCLCMRFLKSFQNFNFVGRLLGPRGNSLKRVEATTRCRV

A0A5D3BBA5 KH domain-containing protein6.8e-2675.29Show/hide
Query:  QPRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPMDTYPNVNSIKKCLCMRFLKSFQNFNFVGRLLGPRGNSLKRVEATTRCRV
        +PRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIP+DTYP                  NFNFVGRLLGPRGNSLKRVEATT CRV
Subjt:  QPRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPMDTYPNVNSIKKCLCMRFLKSFQNFNFVGRLLGPRGNSLKRVEATTRCRV

A0A5D3DNL2 KH domain-containing protein6.8e-2675.29Show/hide
Query:  QPRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPMDTYPNVNSIKKCLCMRFLKSFQNFNFVGRLLGPRGNSLKRVEATTRCRV
        +PRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIP+DTYP                  NFNFVGRLLGPRGNSLKRVEATT CRV
Subjt:  QPRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPMDTYPNVNSIKKCLCMRFLKSFQNFNFVGRLLGPRGNSLKRVEATTRCRV

SwissProt top hitse value%identityAlignment
Q0WLR1 KH domain-containing protein At4g264801.1e-1246.51Show/hide
Query:  SQPRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPMDTYPNVNSIKKCLCMRFLKSFQNFNFVGRLLGPRGNSLKRVEATTRCRV
        S+  +S +P    +W  +P S S   VKR +R++IP+D YP                  N+NFVGRLLGPRGNSLKRVEA+T CRV
Subjt:  SQPRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPMDTYPNVNSIKKCLCMRFLKSFQNFNFVGRLLGPRGNSLKRVEATTRCRV

Q75GR5 KH domain-containing protein SPIN12.0e-1957.65Show/hide
Query:  QPRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPMDTYPNVNSIKKCLCMRFLKSFQNFNFVGRLLGPRGNSLKRVEATTRCRV
        Q RL    G +MDWQGAP SPSS  VK+ILRL++P+D+YP                  NFNFVGR+LGPRGNSLKRVEA+T CRV
Subjt:  QPRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPMDTYPNVNSIKKCLCMRFLKSFQNFNFVGRLLGPRGNSLKRVEATTRCRV

Q8GYR4 KH domain-containing protein At3g086204.4e-2263.86Show/hide
Query:  RLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPMDTYPNVNSIKKCLCMRFLKSFQNFNFVGRLLGPRGNSLKRVEATTRCRV
        R+ G  GM M+WQGAPASPSS+ VKRILRL++P+DTYP                  NFNFVGRLLGPRGNSLKRVEATT CRV
Subjt:  RLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPMDTYPNVNSIKKCLCMRFLKSFQNFNFVGRLLGPRGNSLKRVEATTRCRV

Q9FKT4 KH domain-containing protein At5g561408.3e-1346.51Show/hide
Query:  SQPRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPMDTYPNVNSIKKCLCMRFLKSFQNFNFVGRLLGPRGNSLKRVEATTRCRV
        S+  +  +PG   +W  +P S S    KR +R++IP+D YP                  NFNFVGRLLGPRGNSLKRVEA+T CRV
Subjt:  SQPRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPMDTYPNVNSIKKCLCMRFLKSFQNFNFVGRLLGPRGNSLKRVEATTRCRV

Q9ZVI3 KH domain-containing protein At2g386102.9e-2670.93Show/hide
Query:  SQPRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPMDTYPNVNSIKKCLCMRFLKSFQNFNFVGRLLGPRGNSLKRVEATTRCRV
        SQ RLSG PGMTMDWQGAP SPSS+TVKRILRLEIP+D YP                  NFNFVGRLLGPRGNSLKRVEATT CRV
Subjt:  SQPRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPMDTYPNVNSIKKCLCMRFLKSFQNFNFVGRLLGPRGNSLKRVEATTRCRV

Arabidopsis top hitse value%identityAlignment
AT2G38610.1 RNA-binding KH domain-containing protein2.1e-2770.93Show/hide
Query:  SQPRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPMDTYPNVNSIKKCLCMRFLKSFQNFNFVGRLLGPRGNSLKRVEATTRCRV
        SQ RLSG PGMTMDWQGAP SPSS+TVKRILRLEIP+D YP                  NFNFVGRLLGPRGNSLKRVEATT CRV
Subjt:  SQPRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPMDTYPNVNSIKKCLCMRFLKSFQNFNFVGRLLGPRGNSLKRVEATTRCRV

AT2G38610.2 RNA-binding KH domain-containing protein2.1e-2770.93Show/hide
Query:  SQPRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPMDTYPNVNSIKKCLCMRFLKSFQNFNFVGRLLGPRGNSLKRVEATTRCRV
        SQ RLSG PGMTMDWQGAP SPSS+TVKRILRLEIP+D YP                  NFNFVGRLLGPRGNSLKRVEATT CRV
Subjt:  SQPRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPMDTYPNVNSIKKCLCMRFLKSFQNFNFVGRLLGPRGNSLKRVEATTRCRV

AT3G08620.1 RNA-binding KH domain-containing protein3.1e-2363.86Show/hide
Query:  RLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPMDTYPNVNSIKKCLCMRFLKSFQNFNFVGRLLGPRGNSLKRVEATTRCRV
        R+ G  GM M+WQGAPASPSS+ VKRILRL++P+DTYP                  NFNFVGRLLGPRGNSLKRVEATT CRV
Subjt:  RLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPMDTYPNVNSIKKCLCMRFLKSFQNFNFVGRLLGPRGNSLKRVEATTRCRV

AT4G26480.1 RNA-binding KH domain-containing protein7.7e-1446.51Show/hide
Query:  SQPRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPMDTYPNVNSIKKCLCMRFLKSFQNFNFVGRLLGPRGNSLKRVEATTRCRV
        S+  +S +P    +W  +P S S   VKR +R++IP+D YP                  N+NFVGRLLGPRGNSLKRVEA+T CRV
Subjt:  SQPRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPMDTYPNVNSIKKCLCMRFLKSFQNFNFVGRLLGPRGNSLKRVEATTRCRV

AT5G56140.1 RNA-binding KH domain-containing protein5.9e-1446.51Show/hide
Query:  SQPRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPMDTYPNVNSIKKCLCMRFLKSFQNFNFVGRLLGPRGNSLKRVEATTRCRV
        S+  +  +PG   +W  +P S S    KR +R++IP+D YP                  NFNFVGRLLGPRGNSLKRVEA+T CRV
Subjt:  SQPRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPMDTYPNVNSIKKCLCMRFLKSFQNFNFVGRLLGPRGNSLKRVEATTRCRV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCACTAATGTTACTTTCATTTTTTCCTTTTCACAGCCAAGGTTAAGTGGAAATCCTGGAATGACAATGGACTGGCAAGGTGCTCCTGCAAGCCCTAGTTCATTTAC
TGTAAAGAGGATTTTGCGTTTGGAAATTCCAATGGACACATATCCGAATGTAAATTCAATAAAGAAGTGTCTCTGTATGCGGTTTCTGAAATCCTTTCAGAATTTCAATT
TTGTTGGACGGCTTCTTGGACCGAGAGGCAATTCTCTGAAGCGGGTAGAAGCTACTACAAGATGTCGTGTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGACCACTAATGTTACTTTCATTTTTTCCTTTTCACAGCCAAGGTTAAGTGGAAATCCTGGAATGACAATGGACTGGCAAGGTGCTCCTGCAAGCCCTAGTTCATTTAC
TGTAAAGAGGATTTTGCGTTTGGAAATTCCAATGGACACATATCCGAATGTAAATTCAATAAAGAAGTGTCTCTGTATGCGGTTTCTGAAATCCTTTCAGAATTTCAATT
TTGTTGGACGGCTTCTTGGACCGAGAGGCAATTCTCTGAAGCGGGTAGAAGCTACTACAAGATGTCGTGTGTAA
Protein sequenceShow/hide protein sequence
MTTNVTFIFSFSQPRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPMDTYPNVNSIKKCLCMRFLKSFQNFNFVGRLLGPRGNSLKRVEATTRCRV