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Cmc08g0225111 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc08g0225111
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionIntegrase catalytic domain-containing protein
Genome locationCMiso1.1chr08:15775097..15775444
RNA-Seq ExpressionCmc08g0225111
SyntenyCmc08g0225111
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0016740 - transferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN67403.1 hypothetical protein VITISV_025614 [Vitis vinifera]2.7e-2349.54Show/hide
Query:  MPYSSLKMLSPFEMLFGYTPDLHHLKVFGCACYPLLKPYTKHKLEPKTTQHVFLGYPHNFKGYICYNPLTKQTIVLRHFIFHETIFPYANSTTSSSSQSL
        +P   L   SPF++LFG +P+ H  K+FGC CYP ++PY K+KL  +++Q VFLGY  N KGY+C NPLT +  V RH +FHET+FP+  ST   SS  +
Subjt:  MPYSSLKMLSPFEMLFGYTPDLHHLKVFGCACYPLLKPYTKHKLEPKTTQHVFLGYPHNFKGYICYNPLTKQTIVLRHFIFHETIFPYANSTTSSSSQSL

Query:  SISDPSILP
        +I  P+ LP
Subjt:  SISDPSILP
CAN68489.1 hypothetical protein VITISV_037543 [Vitis vinifera]2.7e-2349.54Show/hide
Query:  MPYSSLKMLSPFEMLFGYTPDLHHLKVFGCACYPLLKPYTKHKLEPKTTQHVFLGYPHNFKGYICYNPLTKQTIVLRHFIFHETIFPYANSTTSSSSQSL
        +P   L   SPF++LFG +P+ H  K+FGC CYP ++PY K+KL  +++Q VFLGY  N KGY+C NPLT +  V RH +FHET+FP+  ST   SS  +
Subjt:  MPYSSLKMLSPFEMLFGYTPDLHHLKVFGCACYPLLKPYTKHKLEPKTTQHVFLGYPHNFKGYICYNPLTKQTIVLRHFIFHETIFPYANSTTSSSSQSL

Query:  SISDPSILP
        +I  P+ LP
Subjt:  SISDPSILP
RVW64314.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]2.7e-2349.54Show/hide
Query:  MPYSSLKMLSPFEMLFGYTPDLHHLKVFGCACYPLLKPYTKHKLEPKTTQHVFLGYPHNFKGYICYNPLTKQTIVLRHFIFHETIFPYANSTTSSSSQSL
        +P   L   SPF++LFG +P+ H  K+FGC CYP ++PY K+KL  +++Q VFLGY  N KGY+C NPLT +  V RH +FHET+FP+  ST   SS  +
Subjt:  MPYSSLKMLSPFEMLFGYTPDLHHLKVFGCACYPLLKPYTKHKLEPKTTQHVFLGYPHNFKGYICYNPLTKQTIVLRHFIFHETIFPYANSTTSSSSQSL

Query:  SISDPSILP
        +I  P+ LP
Subjt:  SISDPSILP
RVX06084.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]2.7e-2349.54Show/hide
Query:  MPYSSLKMLSPFEMLFGYTPDLHHLKVFGCACYPLLKPYTKHKLEPKTTQHVFLGYPHNFKGYICYNPLTKQTIVLRHFIFHETIFPYANSTTSSSSQSL
        +P   L   SPF++LFG +P+ H  K+FGC CYP ++PY K+KL  +++Q VFLGY  N KGY+C NPLT +  V RH +FHET+FP+  ST   SS  +
Subjt:  MPYSSLKMLSPFEMLFGYTPDLHHLKVFGCACYPLLKPYTKHKLEPKTTQHVFLGYPHNFKGYICYNPLTKQTIVLRHFIFHETIFPYANSTTSSSSQSL

Query:  SISDPSILP
        +I  P+ LP
Subjt:  SISDPSILP
TQE01264.1 hypothetical protein C1H46_013171 [Malus baccata]1.1e-2451.26Show/hide
Query:  MPYSSLKMLSPFEMLFGYTPDLHHLKVFGCACYPLLKPYTKHKLEPKTTQHVFLGYPHNFKGYICYNPLTKQTIVLRHFIFHETIFPYANSTTSSSSQSL
        M   +L+M SPF+ LFG +P + HLKVFGCAC+PLLK     KL+PKT+Q +F+GY   +KGY+C NPLT +  V RH +F ET FPY++  TS+S+ S 
Subjt:  MPYSSLKMLSPFEMLFGYTPDLHHLKVFGCACYPLLKPYTKHKLEPKTTQHVFLGYPHNFKGYICYNPLTKQTIVLRHFIFHETIFPYANSTTSSSSQSL

Query:  SISDPS------ILPTLLN
         IS PS      +LP+L+N
Subjt:  SISDPS------ILPTLLN
TrEMBL top hitse value%identityAlignment
A0A438FWJ3 Retrovirus-related Pol polyprotein from transposon TNT 1-941.3e-2349.54Show/hide
Query:  MPYSSLKMLSPFEMLFGYTPDLHHLKVFGCACYPLLKPYTKHKLEPKTTQHVFLGYPHNFKGYICYNPLTKQTIVLRHFIFHETIFPYANSTTSSSSQSL
        +P   L   SPF++LFG +P+ H  K+FGC CYP ++PY K+KL  +++Q VFLGY  N KGY+C NPLT +  V RH +FHET+FP+  ST   SS  +
Subjt:  MPYSSLKMLSPFEMLFGYTPDLHHLKVFGCACYPLLKPYTKHKLEPKTTQHVFLGYPHNFKGYICYNPLTKQTIVLRHFIFHETIFPYANSTTSSSSQSL

Query:  SISDPSILP
        +I  P+ LP
Subjt:  SISDPSILP
A0A438JAU4 Retrovirus-related Pol polyprotein from transposon TNT 1-941.3e-2349.54Show/hide
Query:  MPYSSLKMLSPFEMLFGYTPDLHHLKVFGCACYPLLKPYTKHKLEPKTTQHVFLGYPHNFKGYICYNPLTKQTIVLRHFIFHETIFPYANSTTSSSSQSL
        +P   L   SPF++LFG +P+ H  K+FGC CYP ++PY K+KL  +++Q VFLGY  N KGY+C NPLT +  V RH +FHET+FP+  ST   SS  +
Subjt:  MPYSSLKMLSPFEMLFGYTPDLHHLKVFGCACYPLLKPYTKHKLEPKTTQHVFLGYPHNFKGYICYNPLTKQTIVLRHFIFHETIFPYANSTTSSSSQSL

Query:  SISDPSILP
        +I  P+ LP
Subjt:  SISDPSILP
A0A540MR48 Uncharacterized protein5.2e-2551.26Show/hide
Query:  MPYSSLKMLSPFEMLFGYTPDLHHLKVFGCACYPLLKPYTKHKLEPKTTQHVFLGYPHNFKGYICYNPLTKQTIVLRHFIFHETIFPYANSTTSSSSQSL
        M   +L+M SPF+ LFG +P + HLKVFGCAC+PLLK     KL+PKT+Q +F+GY   +KGY+C NPLT +  V RH +F ET FPY++  TS+S+ S 
Subjt:  MPYSSLKMLSPFEMLFGYTPDLHHLKVFGCACYPLLKPYTKHKLEPKTTQHVFLGYPHNFKGYICYNPLTKQTIVLRHFIFHETIFPYANSTTSSSSQSL

Query:  SISDPS------ILPTLLN
         IS PS      +LP+L+N
Subjt:  SISDPS------ILPTLLN
A5B1N8 Integrase catalytic domain-containing protein1.3e-2349.54Show/hide
Query:  MPYSSLKMLSPFEMLFGYTPDLHHLKVFGCACYPLLKPYTKHKLEPKTTQHVFLGYPHNFKGYICYNPLTKQTIVLRHFIFHETIFPYANSTTSSSSQSL
        +P   L   SPF++LFG +P+ H  K+FGC CYP ++PY K+KL  +++Q VFLGY  N KGY+C NPLT +  V RH +FHET+FP+  ST   SS  +
Subjt:  MPYSSLKMLSPFEMLFGYTPDLHHLKVFGCACYPLLKPYTKHKLEPKTTQHVFLGYPHNFKGYICYNPLTKQTIVLRHFIFHETIFPYANSTTSSSSQSL

Query:  SISDPSILP
        +I  P+ LP
Subjt:  SISDPSILP
A5C001 Integrase catalytic domain-containing protein1.3e-2349.54Show/hide
Query:  MPYSSLKMLSPFEMLFGYTPDLHHLKVFGCACYPLLKPYTKHKLEPKTTQHVFLGYPHNFKGYICYNPLTKQTIVLRHFIFHETIFPYANSTTSSSSQSL
        +P   L   SPF++LFG +P+ H  K+FGC CYP ++PY K+KL  +++Q VFLGY  N KGY+C NPLT +  V RH +FHET+FP+  ST   SS  +
Subjt:  MPYSSLKMLSPFEMLFGYTPDLHHLKVFGCACYPLLKPYTKHKLEPKTTQHVFLGYPHNFKGYICYNPLTKQTIVLRHFIFHETIFPYANSTTSSSSQSL

Query:  SISDPSILP
        +I  P+ LP
Subjt:  SISDPSILP
SwissProt top hitse value%identityAlignment
Q94HW2 Retrovirus-related Pol polyprotein from transposon RE13.5e-1845.56Show/hide
Query:  MPYSSLKMLSPFEMLFGYTPDLHHLKVFGCACYPLLKPYTKHKLEPKTTQHVFLGYPHNFKGYICYNPLTKQTIVLRHFIFHETIFPYAN
        +P   L++ SPF+ LFG +P+   L+VFGCACYP L+PY +HKL+ K+ Q VFLGY      Y+C +  T +  + RH  F E  FP++N
Subjt:  MPYSSLKMLSPFEMLFGYTPDLHHLKVFGCACYPLLKPYTKHKLEPKTTQHVFLGYPHNFKGYICYNPLTKQTIVLRHFIFHETIFPYAN
Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE21.7e-1742.59Show/hide
Query:  MPYSSLKMLSPFEMLFGYTPDLHHLKVFGCACYPLLKPYTKHKLEPKTTQHVFLGYPHNFKGYICYNPLTKQTIVLRHFIFHETIFPYA--NSTTSSSSQ
        +P   L++ SPF+ LFG  P+   LKVFGCACYP L+PY +HKLE K+ Q  F+GY      Y+C +  T +    RH  F E  FP++  N   S+S +
Subjt:  MPYSSLKMLSPFEMLFGYTPDLHHLKVFGCACYPLLKPYTKHKLEPKTTQHVFLGYPHNFKGYICYNPLTKQTIVLRHFIFHETIFPYA--NSTTSSSSQ

Query:  SLSISDPS
          S S P+
Subjt:  SLSISDPS
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTTATTCCTCACTTAAAATGTTATCACCATTTGAAATGCTTTTTGGTTATACTCCTGATTTGCATCATTTAAAAGTTTTTGGATGTGCATGTTACCCCCTTCTCAA
GCCTTACACCAAACACAAACTTGAACCAAAAACCACCCAACATGTATTTTTAGGCTATCCTCATAACTTCAAAGGCTATATTTGTTACAATCCATTAACCAAACAAACTA
TAGTTTTACGCCATTTTATCTTTCATGAAACAATCTTTCCCTATGCAAATTCCACCACATCTTCTTCATCTCAATCCCTATCCATCTCTGATCCAAGCATACTACCCACC
TTACTAAACATTCCATAA
mRNA sequenceShow/hide mRNA sequence
ATGCCTTATTCCTCACTTAAAATGTTATCACCATTTGAAATGCTTTTTGGTTATACTCCTGATTTGCATCATTTAAAAGTTTTTGGATGTGCATGTTACCCCCTTCTCAA
GCCTTACACCAAACACAAACTTGAACCAAAAACCACCCAACATGTATTTTTAGGCTATCCTCATAACTTCAAAGGCTATATTTGTTACAATCCATTAACCAAACAAACTA
TAGTTTTACGCCATTTTATCTTTCATGAAACAATCTTTCCCTATGCAAATTCCACCACATCTTCTTCATCTCAATCCCTATCCATCTCTGATCCAAGCATACTACCCACC
TTACTAAACATTCCATAA
Protein sequenceShow/hide protein sequence
MPYSSLKMLSPFEMLFGYTPDLHHLKVFGCACYPLLKPYTKHKLEPKTTQHVFLGYPHNFKGYICYNPLTKQTIVLRHFIFHETIFPYANSTTSSSSQSLSISDPSILPT
LLNIP