; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc08g0225181 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc08g0225181
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionTy3/gypsy retrotransposon protein
Genome locationCMiso1.1chr08:15993810..15995338
RNA-Seq ExpressionCmc08g0225181
SyntenyCmc08g0225181
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0006488 - dolichol-linked oligosaccharide biosynthetic process (biological process)
GO:0015074 - DNA integration (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016020 - membrane (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR041577 - Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain
IPR043128 - Reverse transcriptase/Diguanylate cyclase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037196.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]1.4e-26288.43Show/hide
Query:  MKSWGADDQGLLVECRTIECGPLEEHEQDREQGEVDVEPIATLLKQFASVFEWPTTLPPQCSIDHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLS
        MKSWGADDQG LVECRTIECGPLEEHEQDREQGE++ EPIA LL++FA VFEWP+TLPPQ  IDHHIYLKSG DPVNVRPYRYAHHQKEEMERLVDEML+
Subjt:  MKSWGADDQGLLVECRTIECGPLEEHEQDREQGEVDVEPIATLLKQFASVFEWPTTLPPQCSIDHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLS

Query:  SGIICPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPMIEELFDELKGASVFSKVDLKAGYHQIRMCPKDIEKTAFRTHEGHYEFLVMPFE
        SGII PSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPDKFPIP+IEELFDELKGASVFSK+DLKAGYHQIRMCP+DIEKTAFRTHEGHYEFLVMPF 
Subjt:  SGIICPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPMIEELFDELKGASVFSKVDLKAGYHQIRMCPKDIEKTAFRTHEGHYEFLVMPFE

Query:  LTNAPSTFQALMNQVFKPYLRRFVLVFFDDILVYSRGMEEHVQHLEVVLGLLQEKELYANLEKCSFAKPRISYLGHFISEQGIEADPEKIRAVSEWQTPT
        LTNAPSTFQALMNQVFKPYLRRFVLVFFDDILVYSRGMEEHVQHLEVVLGLLQEKELY N+EKCSFAKPRISYLGHFISEQGIEADPEKIRAVSEW  P 
Subjt:  LTNAPSTFQALMNQVFKPYLRRFVLVFFDDILVYSRGMEEHVQHLEVVLGLLQEKELYANLEKCSFAKPRISYLGHFISEQGIEADPEKIRAVSEWQTPT

Query:  N---------------GFVKNYGAIAAPLTQLLKKGAYKWDAEAETAFGKLKKAMMT-PVLTMPDFNLPFEIESDASGFGLGAVLTQCRKSVAYFSKTLS
        N                FVKNYG IAAPLTQLLKKGAYKW  E ETAFGKLK+AMMT PVLTMPDF+LPFEIESDASGFG+GAVLTQCRK VAYFSKTLS
Subjt:  N---------------GFVKNYGAIAAPLTQLLKKGAYKWDAEAETAFGKLKKAMMT-PVLTMPDFNLPFEIESDASGFGLGAVLTQCRKSVAYFSKTLS

Query:  MRDRARPVYERELIVVVLVVQRWRPYLLGRKFTVKTDQRSLKFLFEQRVVQPQYQKWVAKLLGYSFEVAYQPGLENRAADALSRISPAVQLNQITAPAMI
        MRDR+RPVYERELI VVL VQRWRPYLLGRKFTVKTDQRSLKFL EQRVVQPQYQKWVAKLLGYSFEV YQPGLEN+AADALSRI+P  +LNQITAPAMI
Subjt:  MRDRARPVYERELIVVVLVVQRWRPYLLGRKFTVKTDQRSLKFLFEQRVVQPQYQKWVAKLLGYSFEVAYQPGLENRAADALSRISPAVQLNQITAPAMI

Query:  DVEIIKEETK
        DVEIIKEET+
Subjt:  DVEIIKEETK

KAA0043539.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]4.8e-27994.89Show/hide
Query:  MKSWGADDQGLLVECRTIECGPLEEHEQDREQGEVDVEPIATLLKQFASVFEWPTTLPPQCSIDHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLS
        MKSWGADDQGLLVECRTIECGPLEEHEQDREQGEVDVEPIATLLKQFASVFEWPTTLPPQCSIDHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLS
Subjt:  MKSWGADDQGLLVECRTIECGPLEEHEQDREQGEVDVEPIATLLKQFASVFEWPTTLPPQCSIDHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLS

Query:  SGIICPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPMIEELFDELKGASVFSKVDLKAGYHQIRMCPKDIEKTAFRTHEGHYEFLVMPFE
        SGIICPSKSPYSSPVLLVRKKD SWRFCVD+RALNNVTIPDKFPIP+IEELFDELKGASVFSKV+LKAGYHQIRMCP+DIEKTAFRTHEGHYEFLVMPF 
Subjt:  SGIICPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPMIEELFDELKGASVFSKVDLKAGYHQIRMCPKDIEKTAFRTHEGHYEFLVMPFE

Query:  LTNAPSTFQALMNQVFKPYLRRFVLVFFDDILVYSRGMEEHVQHLEVVLGLLQEKELYANLEKCSFAKPRISYLGHFISEQGIEADPEKIRAVSEWQTPT
        LTNAPSTFQALMNQVFKPYLRRFVLVFFDDILVYSR MEEHVQHLEVVLGLLQEKELYANLEKCSFAKPRISYLGHFI EQGIEADPEKIRAVSEW TPT
Subjt:  LTNAPSTFQALMNQVFKPYLRRFVLVFFDDILVYSRGMEEHVQHLEVVLGLLQEKELYANLEKCSFAKPRISYLGHFISEQGIEADPEKIRAVSEWQTPT

Query:  N---------------GFVKNYGAIAAPLTQLLKKGAYKWDAEAETAFGKLKKAMMTPVLTMPDFNLPFEIESDASGFGLGAVLTQCRKSVAYFSKTLSM
        N                FVKNYGAIAAPLTQLLKKGAYKWDAEAETAFGKLKKAMMTPVLTMPDFNLPFEIESDASGFGLGAVLTQCRKSVAYFSKTLSM
Subjt:  N---------------GFVKNYGAIAAPLTQLLKKGAYKWDAEAETAFGKLKKAMMTPVLTMPDFNLPFEIESDASGFGLGAVLTQCRKSVAYFSKTLSM

Query:  RDRARPVYERELIVVVLVVQRWRPYLLGRKFTVKTDQRSLKFLFEQRVVQPQYQKWVAKLLGYSFEVAYQPGLENRAADALSRISPAVQLNQITAPAMID
        RDRARPVYERELIVVVLVVQRWRPYLLGRKFTVKTDQRSLKFL EQRVVQPQYQKWVAKLLGYSFEVAYQPGLENRAADALSRISPAVQLNQITAPAMID
Subjt:  RDRARPVYERELIVVVLVVQRWRPYLLGRKFTVKTDQRSLKFLFEQRVVQPQYQKWVAKLLGYSFEVAYQPGLENRAADALSRISPAVQLNQITAPAMID

Query:  VEIIKEETK
        VEIIKEETK
Subjt:  VEIIKEETK

KAA0067256.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]2.8e-26389.8Show/hide
Query:  MKSWGADDQGLLVECRTIECGPLEEHEQDREQGEVDVEPIATLLKQFASVFEWPTTLPPQCSIDHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLS
        MKSWGA+DQG LVECRTIECGPLEEHEQDREQG+ D EPIATLLKQFASVFEWPTTLPPQ SI+HHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLS
Subjt:  MKSWGADDQGLLVECRTIECGPLEEHEQDREQGEVDVEPIATLLKQFASVFEWPTTLPPQCSIDHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLS

Query:  SGIICPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPMIEELFDELKGASVFSKVDLKAGYHQIRMCPKDIEKTAFRTHEGHYEFLVMPFE
        SGII PSKSPYS PVLLVRKKDGSWRFCVDYRALNNVTIPDKFPIP+IEELFD+LKGASVFSK+DLK GYHQIRMCP DIEKTAFRTHEGHYEFLVMPF 
Subjt:  SGIICPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPMIEELFDELKGASVFSKVDLKAGYHQIRMCPKDIEKTAFRTHEGHYEFLVMPFE

Query:  LTNAPSTFQALMNQVFKPYLRRFVLVFFDDILVYSRGMEEHVQHLEVVLGLLQEKELYANLEKCSFAKPRISYLGHFISEQGIEADPEKIRAVSEWQTPT
        LTNAPSTFQALMNQVFKPYLRRFVLVFFDDILVYS+G+EEHVQHLEVVLGLL+EKELYANLEKCSFAKPRISYLGHFISEQGIEADPEKIRAVSEW TPT
Subjt:  LTNAPSTFQALMNQVFKPYLRRFVLVFFDDILVYSRGMEEHVQHLEVVLGLLQEKELYANLEKCSFAKPRISYLGHFISEQGIEADPEKIRAVSEWQTPT

Query:  N---------------GFVKNYGAIAAPLTQLLKKGAYKWDAEAETAFGKLKKAMMT-PVLTMPDFNLPFEIESDASGFGLGAVLTQCRKSVAYFSKTLS
        N                FVK+YGAIAAPLTQLLKKGAYKWDAEAE AFGKLKKAMMT PVL MPDFNLPFEIESDASGFG+GAVLTQCRK VAYFSKTLS
Subjt:  N---------------GFVKNYGAIAAPLTQLLKKGAYKWDAEAETAFGKLKKAMMT-PVLTMPDFNLPFEIESDASGFGLGAVLTQCRKSVAYFSKTLS

Query:  MRDRARPVYERELIVVVLVVQRWRPYLLGRKFTVKTDQRSLKFLFEQRVVQPQYQKWVAKLLGYSFEVAYQPGLENRAADALSRISPAVQLNQITAPAMI
        MRDRA PVYERELIV VL VQRWRPYLLGRKF VKTDQRSLKFL EQRVVQPQYQ+WVAKLLGYSFEVAYQP LEN+AADALSRISPAVQLNQIT PAMI
Subjt:  MRDRARPVYERELIVVVLVVQRWRPYLLGRKFTVKTDQRSLKFLFEQRVVQPQYQKWVAKLLGYSFEVAYQPGLENRAADALSRISPAVQLNQITAPAMI

Query:  DVEIIKEETK
        DVEII EET+
Subjt:  DVEIIKEETK

TYK02491.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]4.3e-28097.97Show/hide
Query:  MKSWGADDQGLLVECRTIECGPLEEHEQDREQGEVDVEPIATLLKQFASVFEWPTTLPPQCSIDHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLS
        MKSWGADDQGLLVECRTIECGPLEEHEQDREQGEVDVEPIATLLKQFASVFEWPTTLPPQCSIDHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLS
Subjt:  MKSWGADDQGLLVECRTIECGPLEEHEQDREQGEVDVEPIATLLKQFASVFEWPTTLPPQCSIDHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLS

Query:  SGIICPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPMIEELFDELKGASVFSKVDLKAGYHQIRMCPKDIEKTAFRTHEGHYEFLVMPFE
        SGIICPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPMIEELFDELKGASVFSKVDLKAGYHQIRMCPKDIEKTAFRTHEGHYEFLVMPFE
Subjt:  SGIICPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPMIEELFDELKGASVFSKVDLKAGYHQIRMCPKDIEKTAFRTHEGHYEFLVMPFE

Query:  LTNAPSTFQALMNQVFKPYLRRFVLVFFDDILVYSRGMEEHVQHLEVVLGLLQEKELYANLEKCSFAKPRISYLGHFISEQGIEADPEKIRAVSEWQTPT
        LTNAPSTFQALMNQVFKPYLRRFVLVFFDDILVYSRGMEEHVQHLEVVLGLLQEKELYANLEKCSFAKPRISYLGHFISEQGIEADPEKIRA        
Subjt:  LTNAPSTFQALMNQVFKPYLRRFVLVFFDDILVYSRGMEEHVQHLEVVLGLLQEKELYANLEKCSFAKPRISYLGHFISEQGIEADPEKIRAVSEWQTPT

Query:  NGFVKNYGAIAAPLTQLLKKGAYKWDAEAETAFGKLKKAMMTPVLTMPDFNLPFEIESDASGFGLGAVLTQCRKSVAYFSKTLSMRDRARPVYERELIVV
         GFVKNYGAIAAPLTQLLKKGAYKWDAEAETAFGKLKKAMMTPVLTMPDFNLPFEIESDASGFGLGAVLTQCRKSVAYFSKTLSMRDRARPVYERELIVV
Subjt:  NGFVKNYGAIAAPLTQLLKKGAYKWDAEAETAFGKLKKAMMTPVLTMPDFNLPFEIESDASGFGLGAVLTQCRKSVAYFSKTLSMRDRARPVYERELIVV

Query:  VLVVQRWRPYLLGRKFTVKTDQRSLKFLFEQRVVQPQYQKWVAKLLGYSFEVAYQPGLENRAADALSRISPAVQLNQITAPAMIDVEIIKEET
        VLVVQRWRPYLLGRKFTVKTDQRSLKFL EQRVVQPQYQKWVAKLLGYSFEVAYQPGLENRAADALSRISPAVQLNQITAPAMIDVEIIKEET
Subjt:  VLVVQRWRPYLLGRKFTVKTDQRSLKFLFEQRVVQPQYQKWVAKLLGYSFEVAYQPGLENRAADALSRISPAVQLNQITAPAMIDVEIIKEET

TYK13876.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]3.7e-26388.63Show/hide
Query:  MKSWGADDQGLLVECRTIECGPLEEHEQDREQGEVDVEPIATLLKQFASVFEWPTTLPPQCSIDHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLS
        MKSWGADDQG LVECRTIECGPLEEHEQDREQGE++ EPIA LL++FA VFEWP+TLPPQ  IDHHIYLKSG DPVNVRPYRYAHHQKEEMERLVDEML+
Subjt:  MKSWGADDQGLLVECRTIECGPLEEHEQDREQGEVDVEPIATLLKQFASVFEWPTTLPPQCSIDHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLS

Query:  SGIICPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPMIEELFDELKGASVFSKVDLKAGYHQIRMCPKDIEKTAFRTHEGHYEFLVMPFE
        SGII PSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPDKFPIP+IEELFDELKGASVFSK+DLKAGYHQIRMCP+DIEKTAFRTHEGHYEFLVMPF 
Subjt:  SGIICPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPMIEELFDELKGASVFSKVDLKAGYHQIRMCPKDIEKTAFRTHEGHYEFLVMPFE

Query:  LTNAPSTFQALMNQVFKPYLRRFVLVFFDDILVYSRGMEEHVQHLEVVLGLLQEKELYANLEKCSFAKPRISYLGHFISEQGIEADPEKIRAVSEWQTPT
        LTNAPSTFQALMNQVFKPYLRRFVLVFFDDILVYSRGMEEHVQHLEVVLGLLQEKELY N+EKCSFAKPRISYLGHFISEQGIEADPEKIRAVSEW TP 
Subjt:  LTNAPSTFQALMNQVFKPYLRRFVLVFFDDILVYSRGMEEHVQHLEVVLGLLQEKELYANLEKCSFAKPRISYLGHFISEQGIEADPEKIRAVSEWQTPT

Query:  N---------------GFVKNYGAIAAPLTQLLKKGAYKWDAEAETAFGKLKKAMMT-PVLTMPDFNLPFEIESDASGFGLGAVLTQCRKSVAYFSKTLS
        N                FVKNYG IAAPLTQLLKKGAYKW  E ETAFGKLK+AMMT PVLTMPDF+LPFEIESDASGFG+GAVLTQCRK VAYFSKTLS
Subjt:  N---------------GFVKNYGAIAAPLTQLLKKGAYKWDAEAETAFGKLKKAMMT-PVLTMPDFNLPFEIESDASGFGLGAVLTQCRKSVAYFSKTLS

Query:  MRDRARPVYERELIVVVLVVQRWRPYLLGRKFTVKTDQRSLKFLFEQRVVQPQYQKWVAKLLGYSFEVAYQPGLENRAADALSRISPAVQLNQITAPAMI
        MRDR+RPVYERELI VVL VQRWRPYLLGRKFTVKTDQRSLKFL EQRVVQPQYQKWVAKLLGYSFEV YQPGLEN+AADALSRI+P  +LNQITAPAMI
Subjt:  MRDRARPVYERELIVVVLVVQRWRPYLLGRKFTVKTDQRSLKFLFEQRVVQPQYQKWVAKLLGYSFEVAYQPGLENRAADALSRISPAVQLNQITAPAMI

Query:  DVEIIKEETK
        DVEIIKEET+
Subjt:  DVEIIKEETK

TrEMBL top hitse value%identityAlignment
A0A5A7T4Y0 Ty3/gypsy retrotransposon protein6.8e-26388.43Show/hide
Query:  MKSWGADDQGLLVECRTIECGPLEEHEQDREQGEVDVEPIATLLKQFASVFEWPTTLPPQCSIDHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLS
        MKSWGADDQG LVECRTIECGPLEEHEQDREQGE++ EPIA LL++FA VFEWP+TLPPQ  IDHHIYLKSG DPVNVRPYRYAHHQKEEMERLVDEML+
Subjt:  MKSWGADDQGLLVECRTIECGPLEEHEQDREQGEVDVEPIATLLKQFASVFEWPTTLPPQCSIDHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLS

Query:  SGIICPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPMIEELFDELKGASVFSKVDLKAGYHQIRMCPKDIEKTAFRTHEGHYEFLVMPFE
        SGII PSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPDKFPIP+IEELFDELKGASVFSK+DLKAGYHQIRMCP+DIEKTAFRTHEGHYEFLVMPF 
Subjt:  SGIICPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPMIEELFDELKGASVFSKVDLKAGYHQIRMCPKDIEKTAFRTHEGHYEFLVMPFE

Query:  LTNAPSTFQALMNQVFKPYLRRFVLVFFDDILVYSRGMEEHVQHLEVVLGLLQEKELYANLEKCSFAKPRISYLGHFISEQGIEADPEKIRAVSEWQTPT
        LTNAPSTFQALMNQVFKPYLRRFVLVFFDDILVYSRGMEEHVQHLEVVLGLLQEKELY N+EKCSFAKPRISYLGHFISEQGIEADPEKIRAVSEW  P 
Subjt:  LTNAPSTFQALMNQVFKPYLRRFVLVFFDDILVYSRGMEEHVQHLEVVLGLLQEKELYANLEKCSFAKPRISYLGHFISEQGIEADPEKIRAVSEWQTPT

Query:  N---------------GFVKNYGAIAAPLTQLLKKGAYKWDAEAETAFGKLKKAMMT-PVLTMPDFNLPFEIESDASGFGLGAVLTQCRKSVAYFSKTLS
        N                FVKNYG IAAPLTQLLKKGAYKW  E ETAFGKLK+AMMT PVLTMPDF+LPFEIESDASGFG+GAVLTQCRK VAYFSKTLS
Subjt:  N---------------GFVKNYGAIAAPLTQLLKKGAYKWDAEAETAFGKLKKAMMT-PVLTMPDFNLPFEIESDASGFGLGAVLTQCRKSVAYFSKTLS

Query:  MRDRARPVYERELIVVVLVVQRWRPYLLGRKFTVKTDQRSLKFLFEQRVVQPQYQKWVAKLLGYSFEVAYQPGLENRAADALSRISPAVQLNQITAPAMI
        MRDR+RPVYERELI VVL VQRWRPYLLGRKFTVKTDQRSLKFL EQRVVQPQYQKWVAKLLGYSFEV YQPGLEN+AADALSRI+P  +LNQITAPAMI
Subjt:  MRDRARPVYERELIVVVLVVQRWRPYLLGRKFTVKTDQRSLKFLFEQRVVQPQYQKWVAKLLGYSFEVAYQPGLENRAADALSRISPAVQLNQITAPAMI

Query:  DVEIIKEETK
        DVEIIKEET+
Subjt:  DVEIIKEETK

A0A5A7TQU2 Ty3/gypsy retrotransposon protein2.3e-27994.89Show/hide
Query:  MKSWGADDQGLLVECRTIECGPLEEHEQDREQGEVDVEPIATLLKQFASVFEWPTTLPPQCSIDHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLS
        MKSWGADDQGLLVECRTIECGPLEEHEQDREQGEVDVEPIATLLKQFASVFEWPTTLPPQCSIDHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLS
Subjt:  MKSWGADDQGLLVECRTIECGPLEEHEQDREQGEVDVEPIATLLKQFASVFEWPTTLPPQCSIDHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLS

Query:  SGIICPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPMIEELFDELKGASVFSKVDLKAGYHQIRMCPKDIEKTAFRTHEGHYEFLVMPFE
        SGIICPSKSPYSSPVLLVRKKD SWRFCVD+RALNNVTIPDKFPIP+IEELFDELKGASVFSKV+LKAGYHQIRMCP+DIEKTAFRTHEGHYEFLVMPF 
Subjt:  SGIICPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPMIEELFDELKGASVFSKVDLKAGYHQIRMCPKDIEKTAFRTHEGHYEFLVMPFE

Query:  LTNAPSTFQALMNQVFKPYLRRFVLVFFDDILVYSRGMEEHVQHLEVVLGLLQEKELYANLEKCSFAKPRISYLGHFISEQGIEADPEKIRAVSEWQTPT
        LTNAPSTFQALMNQVFKPYLRRFVLVFFDDILVYSR MEEHVQHLEVVLGLLQEKELYANLEKCSFAKPRISYLGHFI EQGIEADPEKIRAVSEW TPT
Subjt:  LTNAPSTFQALMNQVFKPYLRRFVLVFFDDILVYSRGMEEHVQHLEVVLGLLQEKELYANLEKCSFAKPRISYLGHFISEQGIEADPEKIRAVSEWQTPT

Query:  N---------------GFVKNYGAIAAPLTQLLKKGAYKWDAEAETAFGKLKKAMMTPVLTMPDFNLPFEIESDASGFGLGAVLTQCRKSVAYFSKTLSM
        N                FVKNYGAIAAPLTQLLKKGAYKWDAEAETAFGKLKKAMMTPVLTMPDFNLPFEIESDASGFGLGAVLTQCRKSVAYFSKTLSM
Subjt:  N---------------GFVKNYGAIAAPLTQLLKKGAYKWDAEAETAFGKLKKAMMTPVLTMPDFNLPFEIESDASGFGLGAVLTQCRKSVAYFSKTLSM

Query:  RDRARPVYERELIVVVLVVQRWRPYLLGRKFTVKTDQRSLKFLFEQRVVQPQYQKWVAKLLGYSFEVAYQPGLENRAADALSRISPAVQLNQITAPAMID
        RDRARPVYERELIVVVLVVQRWRPYLLGRKFTVKTDQRSLKFL EQRVVQPQYQKWVAKLLGYSFEVAYQPGLENRAADALSRISPAVQLNQITAPAMID
Subjt:  RDRARPVYERELIVVVLVVQRWRPYLLGRKFTVKTDQRSLKFLFEQRVVQPQYQKWVAKLLGYSFEVAYQPGLENRAADALSRISPAVQLNQITAPAMID

Query:  VEIIKEETK
        VEIIKEETK
Subjt:  VEIIKEETK

A0A5A7VLC6 Ty3/gypsy retrotransposon protein1.4e-26389.8Show/hide
Query:  MKSWGADDQGLLVECRTIECGPLEEHEQDREQGEVDVEPIATLLKQFASVFEWPTTLPPQCSIDHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLS
        MKSWGA+DQG LVECRTIECGPLEEHEQDREQG+ D EPIATLLKQFASVFEWPTTLPPQ SI+HHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLS
Subjt:  MKSWGADDQGLLVECRTIECGPLEEHEQDREQGEVDVEPIATLLKQFASVFEWPTTLPPQCSIDHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLS

Query:  SGIICPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPMIEELFDELKGASVFSKVDLKAGYHQIRMCPKDIEKTAFRTHEGHYEFLVMPFE
        SGII PSKSPYS PVLLVRKKDGSWRFCVDYRALNNVTIPDKFPIP+IEELFD+LKGASVFSK+DLK GYHQIRMCP DIEKTAFRTHEGHYEFLVMPF 
Subjt:  SGIICPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPMIEELFDELKGASVFSKVDLKAGYHQIRMCPKDIEKTAFRTHEGHYEFLVMPFE

Query:  LTNAPSTFQALMNQVFKPYLRRFVLVFFDDILVYSRGMEEHVQHLEVVLGLLQEKELYANLEKCSFAKPRISYLGHFISEQGIEADPEKIRAVSEWQTPT
        LTNAPSTFQALMNQVFKPYLRRFVLVFFDDILVYS+G+EEHVQHLEVVLGLL+EKELYANLEKCSFAKPRISYLGHFISEQGIEADPEKIRAVSEW TPT
Subjt:  LTNAPSTFQALMNQVFKPYLRRFVLVFFDDILVYSRGMEEHVQHLEVVLGLLQEKELYANLEKCSFAKPRISYLGHFISEQGIEADPEKIRAVSEWQTPT

Query:  N---------------GFVKNYGAIAAPLTQLLKKGAYKWDAEAETAFGKLKKAMMT-PVLTMPDFNLPFEIESDASGFGLGAVLTQCRKSVAYFSKTLS
        N                FVK+YGAIAAPLTQLLKKGAYKWDAEAE AFGKLKKAMMT PVL MPDFNLPFEIESDASGFG+GAVLTQCRK VAYFSKTLS
Subjt:  N---------------GFVKNYGAIAAPLTQLLKKGAYKWDAEAETAFGKLKKAMMT-PVLTMPDFNLPFEIESDASGFGLGAVLTQCRKSVAYFSKTLS

Query:  MRDRARPVYERELIVVVLVVQRWRPYLLGRKFTVKTDQRSLKFLFEQRVVQPQYQKWVAKLLGYSFEVAYQPGLENRAADALSRISPAVQLNQITAPAMI
        MRDRA PVYERELIV VL VQRWRPYLLGRKF VKTDQRSLKFL EQRVVQPQYQ+WVAKLLGYSFEVAYQP LEN+AADALSRISPAVQLNQIT PAMI
Subjt:  MRDRARPVYERELIVVVLVVQRWRPYLLGRKFTVKTDQRSLKFLFEQRVVQPQYQKWVAKLLGYSFEVAYQPGLENRAADALSRISPAVQLNQITAPAMI

Query:  DVEIIKEETK
        DVEII EET+
Subjt:  DVEIIKEETK

A0A5D3BRX1 Ty3/gypsy retrotransposon protein2.1e-28097.97Show/hide
Query:  MKSWGADDQGLLVECRTIECGPLEEHEQDREQGEVDVEPIATLLKQFASVFEWPTTLPPQCSIDHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLS
        MKSWGADDQGLLVECRTIECGPLEEHEQDREQGEVDVEPIATLLKQFASVFEWPTTLPPQCSIDHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLS
Subjt:  MKSWGADDQGLLVECRTIECGPLEEHEQDREQGEVDVEPIATLLKQFASVFEWPTTLPPQCSIDHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLS

Query:  SGIICPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPMIEELFDELKGASVFSKVDLKAGYHQIRMCPKDIEKTAFRTHEGHYEFLVMPFE
        SGIICPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPMIEELFDELKGASVFSKVDLKAGYHQIRMCPKDIEKTAFRTHEGHYEFLVMPFE
Subjt:  SGIICPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPMIEELFDELKGASVFSKVDLKAGYHQIRMCPKDIEKTAFRTHEGHYEFLVMPFE

Query:  LTNAPSTFQALMNQVFKPYLRRFVLVFFDDILVYSRGMEEHVQHLEVVLGLLQEKELYANLEKCSFAKPRISYLGHFISEQGIEADPEKIRAVSEWQTPT
        LTNAPSTFQALMNQVFKPYLRRFVLVFFDDILVYSRGMEEHVQHLEVVLGLLQEKELYANLEKCSFAKPRISYLGHFISEQGIEADPEKIRA        
Subjt:  LTNAPSTFQALMNQVFKPYLRRFVLVFFDDILVYSRGMEEHVQHLEVVLGLLQEKELYANLEKCSFAKPRISYLGHFISEQGIEADPEKIRAVSEWQTPT

Query:  NGFVKNYGAIAAPLTQLLKKGAYKWDAEAETAFGKLKKAMMTPVLTMPDFNLPFEIESDASGFGLGAVLTQCRKSVAYFSKTLSMRDRARPVYERELIVV
         GFVKNYGAIAAPLTQLLKKGAYKWDAEAETAFGKLKKAMMTPVLTMPDFNLPFEIESDASGFGLGAVLTQCRKSVAYFSKTLSMRDRARPVYERELIVV
Subjt:  NGFVKNYGAIAAPLTQLLKKGAYKWDAEAETAFGKLKKAMMTPVLTMPDFNLPFEIESDASGFGLGAVLTQCRKSVAYFSKTLSMRDRARPVYERELIVV

Query:  VLVVQRWRPYLLGRKFTVKTDQRSLKFLFEQRVVQPQYQKWVAKLLGYSFEVAYQPGLENRAADALSRISPAVQLNQITAPAMIDVEIIKEET
        VLVVQRWRPYLLGRKFTVKTDQRSLKFL EQRVVQPQYQKWVAKLLGYSFEVAYQPGLENRAADALSRISPAVQLNQITAPAMIDVEIIKEET
Subjt:  VLVVQRWRPYLLGRKFTVKTDQRSLKFLFEQRVVQPQYQKWVAKLLGYSFEVAYQPGLENRAADALSRISPAVQLNQITAPAMIDVEIIKEET

A0A5D3CU05 Ty3/gypsy retrotransposon protein1.8e-26388.63Show/hide
Query:  MKSWGADDQGLLVECRTIECGPLEEHEQDREQGEVDVEPIATLLKQFASVFEWPTTLPPQCSIDHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLS
        MKSWGADDQG LVECRTIECGPLEEHEQDREQGE++ EPIA LL++FA VFEWP+TLPPQ  IDHHIYLKSG DPVNVRPYRYAHHQKEEMERLVDEML+
Subjt:  MKSWGADDQGLLVECRTIECGPLEEHEQDREQGEVDVEPIATLLKQFASVFEWPTTLPPQCSIDHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLS

Query:  SGIICPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPMIEELFDELKGASVFSKVDLKAGYHQIRMCPKDIEKTAFRTHEGHYEFLVMPFE
        SGII PSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPDKFPIP+IEELFDELKGASVFSK+DLKAGYHQIRMCP+DIEKTAFRTHEGHYEFLVMPF 
Subjt:  SGIICPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPMIEELFDELKGASVFSKVDLKAGYHQIRMCPKDIEKTAFRTHEGHYEFLVMPFE

Query:  LTNAPSTFQALMNQVFKPYLRRFVLVFFDDILVYSRGMEEHVQHLEVVLGLLQEKELYANLEKCSFAKPRISYLGHFISEQGIEADPEKIRAVSEWQTPT
        LTNAPSTFQALMNQVFKPYLRRFVLVFFDDILVYSRGMEEHVQHLEVVLGLLQEKELY N+EKCSFAKPRISYLGHFISEQGIEADPEKIRAVSEW TP 
Subjt:  LTNAPSTFQALMNQVFKPYLRRFVLVFFDDILVYSRGMEEHVQHLEVVLGLLQEKELYANLEKCSFAKPRISYLGHFISEQGIEADPEKIRAVSEWQTPT

Query:  N---------------GFVKNYGAIAAPLTQLLKKGAYKWDAEAETAFGKLKKAMMT-PVLTMPDFNLPFEIESDASGFGLGAVLTQCRKSVAYFSKTLS
        N                FVKNYG IAAPLTQLLKKGAYKW  E ETAFGKLK+AMMT PVLTMPDF+LPFEIESDASGFG+GAVLTQCRK VAYFSKTLS
Subjt:  N---------------GFVKNYGAIAAPLTQLLKKGAYKWDAEAETAFGKLKKAMMT-PVLTMPDFNLPFEIESDASGFGLGAVLTQCRKSVAYFSKTLS

Query:  MRDRARPVYERELIVVVLVVQRWRPYLLGRKFTVKTDQRSLKFLFEQRVVQPQYQKWVAKLLGYSFEVAYQPGLENRAADALSRISPAVQLNQITAPAMI
        MRDR+RPVYERELI VVL VQRWRPYLLGRKFTVKTDQRSLKFL EQRVVQPQYQKWVAKLLGYSFEV YQPGLEN+AADALSRI+P  +LNQITAPAMI
Subjt:  MRDRARPVYERELIVVVLVVQRWRPYLLGRKFTVKTDQRSLKFLFEQRVVQPQYQKWVAKLLGYSFEVAYQPGLENRAADALSRISPAVQLNQITAPAMI

Query:  DVEIIKEETK
        DVEIIKEET+
Subjt:  DVEIIKEETK

SwissProt top hitse value%identityAlignment
P04323 Retrovirus-related Pol polyprotein from transposon 17.69.6e-8138.35Show/hide
Query:  YRYAHHQKEEMERLVDEMLSSGIICPSKSPYSSPVLLVRKKDGS-----WRFCVDYRALNNVTIPDKFPIPMIEELFDELKGASVFSKVDLKAGYHQIRM
        Y Y    ++E+E  + +ML+ GII  S SPY+SP+ +V KK  +     +R  +DYR LN +T+ D+ PIP ++E+  +L   + F+ +DL  G+HQI M
Subjt:  YRYAHHQKEEMERLVDEMLSSGIICPSKSPYSSPVLLVRKKDGS-----WRFCVDYRALNNVTIPDKFPIPMIEELFDELKGASVFSKVDLKAGYHQIRM

Query:  CPKDIEKTAFRTHEGHYEFLVMPFELTNAPSTFQALMNQVFKPYLRRFVLVFFDDILVYSRGMEEHVQHLEVVLGLLQEKELYANLEKCSFAKPRISYLG
         P+ + KTAF T  GHYE+L MPF L NAP+TFQ  MN + +P L +  LV+ DDI+V+S  ++EH+Q L +V   L +  L   L+KC F K   ++LG
Subjt:  CPKDIEKTAFRTHEGHYEFLVMPFELTNAPSTFQALMNQVFKPYLRRFVLVFFDDILVYSRGMEEHVQHLEVVLGLLQEKELYANLEKCSFAKPRISYLG

Query:  HFISEQGIEADPEKIRAVSEWQTPT---------------NGFVKNYGAIAAPLTQLLKKGAY--KWDAEAETAFGKLKKAMM-TPVLTMPDFNLPFEIE
        H ++  GI+ +PEKI A+ ++  PT                 F+ N+  IA P+T+ LKK       + E ++AF KLK  +   P+L +PDF   F + 
Subjt:  HFISEQGIEADPEKIRAVSEWQTPT---------------NGFVKNYGAIAAPLTQLLKKGAY--KWDAEAETAFGKLKKAMM-TPVLTMPDFNLPFEIE

Query:  SDASGFGLGAVLTQCRKSVAYFSKTLSMRDRARPVYERELIVVVLVVQRWRPYLLGRKFTVKTDQRSLKFLFEQRVVQPQYQKWVAKLLGYSFEVAYQPG
        +DAS   LGAVL+Q    ++Y S+TL+  +      E+EL+ +V   + +R YLLGR F + +D + L +L+  +    +  +W  KL  + F++ Y  G
Subjt:  SDASGFGLGAVLTQCRKSVAYFSKTLSMRDRARPVYERELIVVVLVVQRWRPYLLGRKFTVKTDQRSLKFLFEQRVVQPQYQKWVAKLLGYSFEVAYQPG

Query:  LENRAADALSRI
         EN  ADALSRI
Subjt:  LENRAADALSRI

P20825 Retrovirus-related Pol polyprotein from transposon 2972.8e-8037.38Show/hide
Query:  HIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLSSGIICPSKSPYSSPVLLVRKKD-----GSWRFCVDYRALNNVTIPDKFPIPMIEELFDELKGASV
        H+   +   P+  + Y  A   + E+E  V EML+ G+I  S SPY+SP  +V KK        +R  +DYR LN +TIPD++PIP ++E+  +L     
Subjt:  HIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLSSGIICPSKSPYSSPVLLVRKKD-----GSWRFCVDYRALNNVTIPDKFPIPMIEELFDELKGASV

Query:  FSKVDLKAGYHQIRMCPKDIEKTAFRTHEGHYEFLVMPFELTNAPSTFQALMNQVFKPYLRRFVLVFFDDILVYSRGMEEHVQHLEVVLGLLQEKELYAN
        F+ +DL  G+HQI M  + I KTAF T  GHYE+L MPF L NAP+TFQ  MN + +P L +  LV+ DDI+++S  + EH+  +++V   L +  L   
Subjt:  FSKVDLKAGYHQIRMCPKDIEKTAFRTHEGHYEFLVMPFELTNAPSTFQALMNQVFKPYLRRFVLVFFDDILVYSRGMEEHVQHLEVVLGLLQEKELYAN

Query:  LEKCSFAKPRISYLGHFISEQGIEADPEKIRAVSEWQTPTNG---------------FVKNYGAIAAPLTQLLKKGAYKWDA---EAETAFGKLKKAMM-
        L+KC F K   ++LGH ++  GI+ +P K++A+  +  PT                 F+ NY  IA P+T  LKK   K D    E   AF KLK  ++ 
Subjt:  LEKCSFAKPRISYLGHFISEQGIEADPEKIRAVSEWQTPTNG---------------FVKNYGAIAAPLTQLLKKGAYKWDA---EAETAFGKLKKAMM-

Query:  TPVLTMPDFNLPFEIESDASGFGLGAVLTQCRKSVAYFSKTLSMRDRARPVYERELIVVVLVVQRWRPYLLGRKFTVKTDQRSLKFLFEQRVVQPQYQKW
         P+L +PDF   F + +DAS   LGAVL+Q    +++ S+TL+  +      E+EL+ +V   + +R YLLGR+F + +D + L++L   +    + ++W
Subjt:  TPVLTMPDFNLPFEIESDASGFGLGAVLTQCRKSVAYFSKTLSMRDRARPVYERELIVVVLVVQRWRPYLLGRKFTVKTDQRSLKFLFEQRVVQPQYQKW

Query:  VAKLLGYSFEVAYQPGLENRAADALSRI
          +L  Y F++ Y  G EN  ADALSRI
Subjt:  VAKLLGYSFEVAYQPGLENRAADALSRI

Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein1.5e-7338.08Show/hide
Query:  IDHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLSSGIICPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPMIEELFDELKGASVFS
        + H I +K G     ++PY      ++E+ ++V ++L +  I PSKSP SSPV+LV KKDG++R CVDYR LN  TI D FP+P I+ L   +  A +F+
Subjt:  IDHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLSSGIICPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPMIEELFDELKGASVFS

Query:  KVDLKAGYHQIRMCPKDIEKTAFRTHEGHYEFLVMPFELTNAPSTFQALMNQVFKPYLRRFVLVFFDDILVYSRGMEEHVQHLEVVLGLLQEKELYANLE
         +DL +GYHQI M PKD  KTAF T  G YE+ VMPF L NAPSTF   M   F+    RFV V+ DDIL++S   EEH +HL+ VL  L+ + L    +
Subjt:  KVDLKAGYHQIRMCPKDIEKTAFRTHEGHYEFLVMPFELTNAPSTFQALMNQVFKPYLRRFVLVFFDDILVYSRGMEEHVQHLEVVLGLLQEKELYANLE

Query:  KCSFAKPRISYLGHFISEQGIEADPEKIRAVSEWQTPT---------------NGFVKNYGAIAAPLTQLLKKGAYKWDAEAETAFGKLKKAMM-TPVLT
        KC FA     +LG+ I  Q I     K  A+ ++ TP                  F+ N   IA P+ QL      +W  + + A  KLK A+  +PVL 
Subjt:  KCSFAKPRISYLGHFISEQGIEADPEKIRAVSEWQTPT---------------NGFVKNYGAIAAPLTQLLKKGAYKWDAEAETAFGKLKKAMM-TPVLT

Query:  MPDFNLPFEIESDASGFGLGAVLTQCRKS------VAYFSKTLSMRDRARPVYERELIVVVLVVQRWRPYLLGRKFTVKTDQRSLKFLFEQRVVQPQYQK
          +    + + +DAS  G+GAVL +          V YFSK+L    +  P  E EL+ ++  +  +R  L G+ FT++TD  SL  L  +     + Q+
Subjt:  MPDFNLPFEIESDASGFGLGAVLTQCRKS------VAYFSKTLSMRDRARPVYERELIVVVLVVQRWRPYLLGRKFTVKTDQRSLKFLFEQRVVQPQYQK

Query:  WVAKLLGYSFEVAYQPGLENRAADALSR
        W+  L  Y F + Y  G +N  ADA+SR
Subjt:  WVAKLLGYSFEVAYQPGLENRAADALSR

Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus8.4e-7734.93Show/hide
Query:  EPIATLLKQFASVFEWPTT-LPPQCSIDHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLSSGIICPSKSPYSSPVLLVRKK-----DGSWRFCVDY
        E + +LL +F  +FE P + +  + ++   I   +  DP+  + Y Y  + + E+ER +DE+L  GII PS SPY+SP+ +V KK     +  +R  VD+
Subjt:  EPIATLLKQFASVFEWPTT-LPPQCSIDHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLSSGIICPSKSPYSSPVLLVRKK-----DGSWRFCVDY

Query:  RALNNVTIPDKFPIPMIEELFDELKGASVFSKVDLKAGYHQIRMCPKDIEKTAFRTHEGHYEFLVMPFELTNAPSTFQALMNQVFKPYLRRFVLVFFDDI
        + LN VTIPD +PIP I      L  A  F+ +DL +G+HQI M   DI KTAF T  G YEFL +PF L NAP+ FQ +++ + + ++ +   V+ DDI
Subjt:  RALNNVTIPDKFPIPMIEELFDELKGASVFSKVDLKAGYHQIRMCPKDIEKTAFRTHEGHYEFLVMPFELTNAPSTFQALMNQVFKPYLRRFVLVFFDDI

Query:  LVYSRGMEEHVQHLEVVLGLLQEKELYANLEKCSFAKPRISYLGHFISEQGIEADPEKIRAVSEWQTPTN---------------GFVKNYGAIAAPLTQ
        +V+S   + H ++L +VL  L +  L  NLEK  F   ++ +LG+ ++  GI+ADP+K+RA+SE   PT+                F+++Y  +A PLT 
Subjt:  LVYSRGMEEHVQHLEVVLGLLQEKELYANLEKCSFAKPRISYLGHFISEQGIEADPEKIRAVSEWQTPTN---------------GFVKNYGAIAAPLTQ

Query:  LLK------------KGAYKWDAEAETAFGKLKKAM-MTPVLTMPDFNLPFEIESDASGFGLGAVLTQ----CRKSVAYFSKTLSMRDRARPVYERELIV
        L +            K     D  A  +F  LK  +  + +L  P F  PF + +DAS + +GAVL+Q      + +AY S++L+  +      E+E++ 
Subjt:  LLK------------KGAYKWDAEAETAFGKLKKAM-MTPVLTMPDFNLPFEIESDASGFGLGAVLTQ----CRKSVAYFSKTLSMRDRARPVYERELIV

Query:  VVLVVQRWRPYLLGR-KFTVKTDQRSLKFLFEQRVVQPQYQKWVAKLLGYSFEVAYQPGLENRAADALSRISPAVQLNQIT
        ++  +   R YL G     V TD + L F    R    + ++W A++  Y+ E+ Y+PG  N  ADALSRI P  QLNQ++
Subjt:  VVLVVQRWRPYLLGR-KFTVKTDQRSLKFLFEQRVVQPQYQKWVAKLLGYSFEVAYQPGLENRAADALSRISPAVQLNQIT

Q99315 Transposon Ty3-G Gag-Pol polyprotein1.1e-7338.08Show/hide
Query:  IDHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLSSGIICPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPMIEELFDELKGASVFS
        + H I +K G     ++PY      ++E+ ++V ++L +  I PSKSP SSPV+LV KKDG++R CVDYR LN  TI D FP+P I+ L   +  A +F+
Subjt:  IDHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLSSGIICPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPMIEELFDELKGASVFS

Query:  KVDLKAGYHQIRMCPKDIEKTAFRTHEGHYEFLVMPFELTNAPSTFQALMNQVFKPYLRRFVLVFFDDILVYSRGMEEHVQHLEVVLGLLQEKELYANLE
         +DL +GYHQI M PKD  KTAF T  G YE+ VMPF L NAPSTF   M   F+    RFV V+ DDIL++S   EEH +HL+ VL  L+ + L    +
Subjt:  KVDLKAGYHQIRMCPKDIEKTAFRTHEGHYEFLVMPFELTNAPSTFQALMNQVFKPYLRRFVLVFFDDILVYSRGMEEHVQHLEVVLGLLQEKELYANLE

Query:  KCSFAKPRISYLGHFISEQGIEADPEKIRAVSEWQTPT---------------NGFVKNYGAIAAPLTQLLKKGAYKWDAEAETAFGKLKKAMM-TPVLT
        KC FA     +LG+ I  Q I     K  A+ ++ TP                  F+ N   IA P+ QL      +W  + + A  KLK A+  +PVL 
Subjt:  KCSFAKPRISYLGHFISEQGIEADPEKIRAVSEWQTPT---------------NGFVKNYGAIAAPLTQLLKKGAYKWDAEAETAFGKLKKAMM-TPVLT

Query:  MPDFNLPFEIESDASGFGLGAVLTQCRKS------VAYFSKTLSMRDRARPVYERELIVVVLVVQRWRPYLLGRKFTVKTDQRSLKFLFEQRVVQPQYQK
          +    + + +DAS  G+GAVL +          V YFSK+L    +  P  E EL+ ++  +  +R  L G+ FT++TD  SL  L  +     + Q+
Subjt:  MPDFNLPFEIESDASGFGLGAVLTQCRKS------VAYFSKTLSMRDRARPVYERELIVVVLVVQRWRPYLLGRKFTVKTDQRSLKFLFEQRVVQPQYQK

Query:  WVAKLLGYSFEVAYQPGLENRAADALSR
        W+  L  Y F + Y  G +N  ADA+SR
Subjt:  WVAKLLGYSFEVAYQPGLENRAADALSR

Arabidopsis top hitse value%identityAlignment
ATMG00850.1 DNA/RNA polymerases superfamily protein1.0e-0556.41Show/hide
Query:  QKEEMERLVDEMLSSGIICPSKSPYSSPVLLVRKKDGSW
        ++  ++  + EML + II PS SPYSSPVLLV+KKDG W
Subjt:  QKEEMERLVDEMLSSGIICPSKSPYSSPVLLVRKKDGSW

ATMG00860.1 DNA/RNA polymerases superfamily protein2.5e-2344.27Show/hide
Query:  VQHLEVVLGLLQEKELYANLEKCSFAKPRISYLG--HFISEQGIEADPEKIRAVSEWQTPTN---------------GFVKNYGAIAAPLTQLLKKGAYK
        + HL +VL + ++ + YAN +KC+F +P+I+YLG  H IS +G+ ADP K+ A+  W  P N                FVKNYG I  PLT+LLKK + K
Subjt:  VQHLEVVLGLLQEKELYANLEKCSFAKPRISYLG--HFISEQGIEADPEKIRAVSEWQTPTN---------------GFVKNYGAIAAPLTQLLKKGAYK

Query:  WDAEAETAFGKLKKAMMT-PVLTMPDFNLPF
        W   A  AF  LK A+ T PVL +PD  LPF
Subjt:  WDAEAETAFGKLKKAMMT-PVLTMPDFNLPF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATCATGGGGAGCAGACGATCAGGGGCTTCTAGTGGAATGTCGAACCATAGAGTGTGGGCCGTTGGAAGAACATGAACAAGACAGAGAACAGGGGGAGGTAGACGT
AGAACCAATAGCGACCCTGCTTAAGCAGTTTGCTAGCGTGTTTGAATGGCCCACGACGCTTCCACCACAGTGCAGCATTGACCACCACATCTACCTGAAGAGTGGGACGG
ATCCAGTGAACGTAAGGCCATACCGGTACGCGCATCATCAGAAGGAAGAAATGGAGAGATTGGTGGATGAGATGTTATCTTCAGGGATCATATGTCCGAGCAAAAGCCCG
TACTCCAGCCCGGTGCTGTTGGTGAGGAAGAAAGACGGGAGTTGGAGGTTCTGTGTAGACTACCGGGCACTGAACAATGTCACGATCCCAGACAAGTTTCCCATACCGAT
GATAGAAGAACTGTTCGACGAATTGAAAGGAGCTAGTGTATTCTCCAAGGTAGACCTCAAAGCCGGTTATCATCAAATTAGGATGTGCCCCAAAGACATCGAAAAGACCG
CGTTCAGAACTCATGAAGGGCACTACGAATTCTTAGTGATGCCGTTCGAATTAACGAATGCCCCATCGACCTTTCAGGCGCTGATGAATCAGGTGTTCAAGCCATATTTG
AGAAGGTTTGTGCTGGTATTCTTTGATGATATTCTAGTCTATAGTCGAGGGATGGAAGAACATGTCCAGCACTTAGAAGTGGTCTTAGGACTACTACAAGAAAAGGAGTT
ATATGCGAATTTGGAGAAGTGCAGCTTTGCAAAACCACGGATCAGCTATTTGGGGCATTTCATTTCGGAACAGGGTATTGAAGCAGATCCGGAAAAGATAAGGGCAGTGA
GTGAATGGCAGACTCCGACCAATGGTTTTGTTAAAAACTATGGAGCAATAGCAGCGCCGCTCACCCAACTGCTTAAGAAAGGAGCGTACAAGTGGGATGCAGAAGCTGAG
ACCGCCTTTGGTAAGCTGAAAAAGGCCATGATGACCCCGGTGCTCACCATGCCAGACTTCAATCTGCCTTTCGAAATTGAATCAGATGCGTCGGGGTTTGGATTGGGGGC
TGTGCTGACTCAATGCCGAAAGTCGGTGGCTTATTTCAGTAAGACACTAAGTATGCGAGACAGAGCACGGCCGGTATATGAAAGAGAATTAATTGTCGTGGTTCTTGTAG
TACAAAGATGGCGGCCATACTTGCTAGGAAGGAAGTTCACGGTGAAGACAGACCAAAGGTCGCTGAAGTTTTTGTTTGAACAACGGGTTGTGCAACCCCAATATCAGAAG
TGGGTAGCAAAGCTCCTGGGTTATTCGTTTGAAGTGGCTTACCAACCAGGACTGGAGAATAGAGCAGCCGATGCCTTGTCCAGGATTTCCCCAGCAGTACAGCTGAATCA
AATCACAGCCCCCGCAATGATAGATGTGGAAATCATCAAGGAAGAGACAAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAATCATGGGGAGCAGACGATCAGGGGCTTCTAGTGGAATGTCGAACCATAGAGTGTGGGCCGTTGGAAGAACATGAACAAGACAGAGAACAGGGGGAGGTAGACGT
AGAACCAATAGCGACCCTGCTTAAGCAGTTTGCTAGCGTGTTTGAATGGCCCACGACGCTTCCACCACAGTGCAGCATTGACCACCACATCTACCTGAAGAGTGGGACGG
ATCCAGTGAACGTAAGGCCATACCGGTACGCGCATCATCAGAAGGAAGAAATGGAGAGATTGGTGGATGAGATGTTATCTTCAGGGATCATATGTCCGAGCAAAAGCCCG
TACTCCAGCCCGGTGCTGTTGGTGAGGAAGAAAGACGGGAGTTGGAGGTTCTGTGTAGACTACCGGGCACTGAACAATGTCACGATCCCAGACAAGTTTCCCATACCGAT
GATAGAAGAACTGTTCGACGAATTGAAAGGAGCTAGTGTATTCTCCAAGGTAGACCTCAAAGCCGGTTATCATCAAATTAGGATGTGCCCCAAAGACATCGAAAAGACCG
CGTTCAGAACTCATGAAGGGCACTACGAATTCTTAGTGATGCCGTTCGAATTAACGAATGCCCCATCGACCTTTCAGGCGCTGATGAATCAGGTGTTCAAGCCATATTTG
AGAAGGTTTGTGCTGGTATTCTTTGATGATATTCTAGTCTATAGTCGAGGGATGGAAGAACATGTCCAGCACTTAGAAGTGGTCTTAGGACTACTACAAGAAAAGGAGTT
ATATGCGAATTTGGAGAAGTGCAGCTTTGCAAAACCACGGATCAGCTATTTGGGGCATTTCATTTCGGAACAGGGTATTGAAGCAGATCCGGAAAAGATAAGGGCAGTGA
GTGAATGGCAGACTCCGACCAATGGTTTTGTTAAAAACTATGGAGCAATAGCAGCGCCGCTCACCCAACTGCTTAAGAAAGGAGCGTACAAGTGGGATGCAGAAGCTGAG
ACCGCCTTTGGTAAGCTGAAAAAGGCCATGATGACCCCGGTGCTCACCATGCCAGACTTCAATCTGCCTTTCGAAATTGAATCAGATGCGTCGGGGTTTGGATTGGGGGC
TGTGCTGACTCAATGCCGAAAGTCGGTGGCTTATTTCAGTAAGACACTAAGTATGCGAGACAGAGCACGGCCGGTATATGAAAGAGAATTAATTGTCGTGGTTCTTGTAG
TACAAAGATGGCGGCCATACTTGCTAGGAAGGAAGTTCACGGTGAAGACAGACCAAAGGTCGCTGAAGTTTTTGTTTGAACAACGGGTTGTGCAACCCCAATATCAGAAG
TGGGTAGCAAAGCTCCTGGGTTATTCGTTTGAAGTGGCTTACCAACCAGGACTGGAGAATAGAGCAGCCGATGCCTTGTCCAGGATTTCCCCAGCAGTACAGCTGAATCA
AATCACAGCCCCCGCAATGATAGATGTGGAAATCATCAAGGAAGAGACAAAGTAA
Protein sequenceShow/hide protein sequence
MKSWGADDQGLLVECRTIECGPLEEHEQDREQGEVDVEPIATLLKQFASVFEWPTTLPPQCSIDHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLSSGIICPSKSP
YSSPVLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPMIEELFDELKGASVFSKVDLKAGYHQIRMCPKDIEKTAFRTHEGHYEFLVMPFELTNAPSTFQALMNQVFKPYL
RRFVLVFFDDILVYSRGMEEHVQHLEVVLGLLQEKELYANLEKCSFAKPRISYLGHFISEQGIEADPEKIRAVSEWQTPTNGFVKNYGAIAAPLTQLLKKGAYKWDAEAE
TAFGKLKKAMMTPVLTMPDFNLPFEIESDASGFGLGAVLTQCRKSVAYFSKTLSMRDRARPVYERELIVVVLVVQRWRPYLLGRKFTVKTDQRSLKFLFEQRVVQPQYQK
WVAKLLGYSFEVAYQPGLENRAADALSRISPAVQLNQITAPAMIDVEIIKEETK