| GenBank top hits | e value | %identity | Alignment |
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| KAA0025945.1 gag/pol protein [Cucumis melo var. makuwa] | 1.4e-85 | 89.13 | Show/hide |
Query: LEMVSMYFNSVWELVDLPKGVKPIGCKWIYQRKRDSAGKVHTFKARLVAKEYTEREGVDYEETFSLVAMLKSIRIFLSIATFYDYEIWKMVVKIAFLNGN
LEM SMYFNSVWELVDLP+GVKPIGCKWIY+RKRDSAGKV TFKARLVAK YT+REGVDYEETFS VAMLKSIRI LSIATFYDYEIW+M VK AFLNGN
Subjt: LEMVSMYFNSVWELVDLPKGVKPIGCKWIYQRKRDSAGKVHTFKARLVAKEYTEREGVDYEETFSLVAMLKSIRIFLSIATFYDYEIWKMVVKIAFLNGN
Query: LEESIFISQLEGFITQGHEQNVYKLNLSIYGLKQASRSWNIRFDIAIKSYDFDQNVDEPCVYKKINKGKVAFLVLYVDDILLKG
LEESIF+SQ EGFITQG EQ V KLN SIYGLKQASRSWNIRFD AIKSY FDQNVDEPCVYKKINKGKVAFLVLYVDDILL G
Subjt: LEESIFISQLEGFITQGHEQNVYKLNLSIYGLKQASRSWNIRFDIAIKSYDFDQNVDEPCVYKKINKGKVAFLVLYVDDILLKG
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| KAA0050437.1 gag/pol protein [Cucumis melo var. makuwa] | 1.2e-84 | 88.04 | Show/hide |
Query: LEMVSMYFNSVWELVDLPKGVKPIGCKWIYQRKRDSAGKVHTFKARLVAKEYTEREGVDYEETFSLVAMLKSIRIFLSIATFYDYEIWKMVVKIAFLNGN
LEM SMYFN VWELVDLP+GVKPIGCKWIY+RKRDSAGKV TFKARLVAK YT+REGVDYEETFSLVAML+SIRI LSIATFYDYEIWKM VK A LNGN
Subjt: LEMVSMYFNSVWELVDLPKGVKPIGCKWIYQRKRDSAGKVHTFKARLVAKEYTEREGVDYEETFSLVAMLKSIRIFLSIATFYDYEIWKMVVKIAFLNGN
Query: LEESIFISQLEGFITQGHEQNVYKLNLSIYGLKQASRSWNIRFDIAIKSYDFDQNVDEPCVYKKINKGKVAFLVLYVDDILLKG
LEESIF+SQ EGFITQG EQ V KLN SIYGLKQASRSWNIRFD AIK Y FDQNVDEPCVYKKINKGKVAFLVLYVDDILL G
Subjt: LEESIFISQLEGFITQGHEQNVYKLNLSIYGLKQASRSWNIRFDIAIKSYDFDQNVDEPCVYKKINKGKVAFLVLYVDDILLKG
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| KAA0059226.1 gag/pol protein [Cucumis melo var. makuwa] | 1.4e-85 | 89.13 | Show/hide |
Query: LEMVSMYFNSVWELVDLPKGVKPIGCKWIYQRKRDSAGKVHTFKARLVAKEYTEREGVDYEETFSLVAMLKSIRIFLSIATFYDYEIWKMVVKIAFLNGN
LEM SMYFNSVWELVDLP+GVKPIGCKWIY+RKRDSAGKV TFKARLVAK YT+REGVDYEETFS VAMLKSIRI LSIATFYDYEIW+M VK AFLNGN
Subjt: LEMVSMYFNSVWELVDLPKGVKPIGCKWIYQRKRDSAGKVHTFKARLVAKEYTEREGVDYEETFSLVAMLKSIRIFLSIATFYDYEIWKMVVKIAFLNGN
Query: LEESIFISQLEGFITQGHEQNVYKLNLSIYGLKQASRSWNIRFDIAIKSYDFDQNVDEPCVYKKINKGKVAFLVLYVDDILLKG
LEESIF+SQ EGFITQG EQ V KLN SIYGLKQASRSWNIRFD AIKSY FDQNVDEPCVYKKINKGKVAFLVLYVDDILL G
Subjt: LEESIFISQLEGFITQGHEQNVYKLNLSIYGLKQASRSWNIRFDIAIKSYDFDQNVDEPCVYKKINKGKVAFLVLYVDDILLKG
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| TYK02506.1 gag/pol protein [Cucumis melo var. makuwa] | 6.2e-97 | 98.36 | Show/hide |
Query: LEMVSMYFNSVWELVDLPKGVKPIGCKWIYQRKRDSAGKVHTFKARLVAKEYTEREGVDYEETFSLVAMLKSIRIFLSIATFYDYEIWKMVVKIAFLNGN
LEMVSMYFNSVWELVDLPKGVKPIGCKWIYQRKRDSAGKVHTFKARLVAKEYT+REGVDYEETFSLVAMLKSIRIFLSIATFYDYEIWKMVVKIAFLNGN
Subjt: LEMVSMYFNSVWELVDLPKGVKPIGCKWIYQRKRDSAGKVHTFKARLVAKEYTEREGVDYEETFSLVAMLKSIRIFLSIATFYDYEIWKMVVKIAFLNGN
Query: LEESIFISQLEGFITQGHEQNVYKLNLSIYGLKQASRSWNIRFDIAIKSYDFDQNVDEPCVYKKINKGKVAFLVLYVDDILLK
LEESIFISQLEGFITQG EQNVYKLNLSIYGLKQASRSWNIRFD AIKSYDFDQNVDEPCVYKKINKGKVAFLVLYVDDILLK
Subjt: LEESIFISQLEGFITQGHEQNVYKLNLSIYGLKQASRSWNIRFDIAIKSYDFDQNVDEPCVYKKINKGKVAFLVLYVDDILLK
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| TYK15984.1 gag/pol protein [Cucumis melo var. makuwa] | 1.4e-85 | 89.13 | Show/hide |
Query: LEMVSMYFNSVWELVDLPKGVKPIGCKWIYQRKRDSAGKVHTFKARLVAKEYTEREGVDYEETFSLVAMLKSIRIFLSIATFYDYEIWKMVVKIAFLNGN
LEM SMYFNSVWELVDLP+GVKPIGCKWIY+RKRDSAGKV TFKARLVAK YT+REGVDYEETFS VAMLKSIRI LSIATFYDYEIW+M VK AFLNGN
Subjt: LEMVSMYFNSVWELVDLPKGVKPIGCKWIYQRKRDSAGKVHTFKARLVAKEYTEREGVDYEETFSLVAMLKSIRIFLSIATFYDYEIWKMVVKIAFLNGN
Query: LEESIFISQLEGFITQGHEQNVYKLNLSIYGLKQASRSWNIRFDIAIKSYDFDQNVDEPCVYKKINKGKVAFLVLYVDDILLKG
LEESIF+SQ EGFITQG EQ V KLN SIYGLKQASRSWNIRFD AIKSY FDQNVDEPCVYKKINKGKVAFLVLYVDDILL G
Subjt: LEESIFISQLEGFITQGHEQNVYKLNLSIYGLKQASRSWNIRFDIAIKSYDFDQNVDEPCVYKKINKGKVAFLVLYVDDILLKG
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TZD0 Gag/pol protein | 6.9e-86 | 89.13 | Show/hide |
Query: LEMVSMYFNSVWELVDLPKGVKPIGCKWIYQRKRDSAGKVHTFKARLVAKEYTEREGVDYEETFSLVAMLKSIRIFLSIATFYDYEIWKMVVKIAFLNGN
LEM SMYFNSVWELVDLP+GVKPIGCKWIY+RKRDSAGKV TFKARLVAK YT+REGVDYEETFS VAMLKSIRI LSIATFYDYEIW+M VK AFLNGN
Subjt: LEMVSMYFNSVWELVDLPKGVKPIGCKWIYQRKRDSAGKVHTFKARLVAKEYTEREGVDYEETFSLVAMLKSIRIFLSIATFYDYEIWKMVVKIAFLNGN
Query: LEESIFISQLEGFITQGHEQNVYKLNLSIYGLKQASRSWNIRFDIAIKSYDFDQNVDEPCVYKKINKGKVAFLVLYVDDILLKG
LEESIF+SQ EGFITQG EQ V KLN SIYGLKQASRSWNIRFD AIKSY FDQNVDEPCVYKKINKGKVAFLVLYVDDILL G
Subjt: LEESIFISQLEGFITQGHEQNVYKLNLSIYGLKQASRSWNIRFDIAIKSYDFDQNVDEPCVYKKINKGKVAFLVLYVDDILLKG
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| A0A5A7U7T0 Gag/pol protein | 5.9e-85 | 88.04 | Show/hide |
Query: LEMVSMYFNSVWELVDLPKGVKPIGCKWIYQRKRDSAGKVHTFKARLVAKEYTEREGVDYEETFSLVAMLKSIRIFLSIATFYDYEIWKMVVKIAFLNGN
LEM SMYFN VWELVDLP+GVKPIGCKWIY+RKRDSAGKV TFKARLVAK YT+REGVDYEETFSLVAML+SIRI LSIATFYDYEIWKM VK A LNGN
Subjt: LEMVSMYFNSVWELVDLPKGVKPIGCKWIYQRKRDSAGKVHTFKARLVAKEYTEREGVDYEETFSLVAMLKSIRIFLSIATFYDYEIWKMVVKIAFLNGN
Query: LEESIFISQLEGFITQGHEQNVYKLNLSIYGLKQASRSWNIRFDIAIKSYDFDQNVDEPCVYKKINKGKVAFLVLYVDDILLKG
LEESIF+SQ EGFITQG EQ V KLN SIYGLKQASRSWNIRFD AIK Y FDQNVDEPCVYKKINKGKVAFLVLYVDDILL G
Subjt: LEESIFISQLEGFITQGHEQNVYKLNLSIYGLKQASRSWNIRFDIAIKSYDFDQNVDEPCVYKKINKGKVAFLVLYVDDILLKG
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| A0A5A7UYE8 Gag/pol protein | 6.9e-86 | 89.13 | Show/hide |
Query: LEMVSMYFNSVWELVDLPKGVKPIGCKWIYQRKRDSAGKVHTFKARLVAKEYTEREGVDYEETFSLVAMLKSIRIFLSIATFYDYEIWKMVVKIAFLNGN
LEM SMYFNSVWELVDLP+GVKPIGCKWIY+RKRDSAGKV TFKARLVAK YT+REGVDYEETFS VAMLKSIRI LSIATFYDYEIW+M VK AFLNGN
Subjt: LEMVSMYFNSVWELVDLPKGVKPIGCKWIYQRKRDSAGKVHTFKARLVAKEYTEREGVDYEETFSLVAMLKSIRIFLSIATFYDYEIWKMVVKIAFLNGN
Query: LEESIFISQLEGFITQGHEQNVYKLNLSIYGLKQASRSWNIRFDIAIKSYDFDQNVDEPCVYKKINKGKVAFLVLYVDDILLKG
LEESIF+SQ EGFITQG EQ V KLN SIYGLKQASRSWNIRFD AIKSY FDQNVDEPCVYKKINKGKVAFLVLYVDDILL G
Subjt: LEESIFISQLEGFITQGHEQNVYKLNLSIYGLKQASRSWNIRFDIAIKSYDFDQNVDEPCVYKKINKGKVAFLVLYVDDILLKG
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| A0A5D3BWA6 Gag/pol protein | 3.0e-97 | 98.36 | Show/hide |
Query: LEMVSMYFNSVWELVDLPKGVKPIGCKWIYQRKRDSAGKVHTFKARLVAKEYTEREGVDYEETFSLVAMLKSIRIFLSIATFYDYEIWKMVVKIAFLNGN
LEMVSMYFNSVWELVDLPKGVKPIGCKWIYQRKRDSAGKVHTFKARLVAKEYT+REGVDYEETFSLVAMLKSIRIFLSIATFYDYEIWKMVVKIAFLNGN
Subjt: LEMVSMYFNSVWELVDLPKGVKPIGCKWIYQRKRDSAGKVHTFKARLVAKEYTEREGVDYEETFSLVAMLKSIRIFLSIATFYDYEIWKMVVKIAFLNGN
Query: LEESIFISQLEGFITQGHEQNVYKLNLSIYGLKQASRSWNIRFDIAIKSYDFDQNVDEPCVYKKINKGKVAFLVLYVDDILLK
LEESIFISQLEGFITQG EQNVYKLNLSIYGLKQASRSWNIRFD AIKSYDFDQNVDEPCVYKKINKGKVAFLVLYVDDILLK
Subjt: LEESIFISQLEGFITQGHEQNVYKLNLSIYGLKQASRSWNIRFDIAIKSYDFDQNVDEPCVYKKINKGKVAFLVLYVDDILLK
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| A0A5D3CYF4 Gag/pol protein | 6.9e-86 | 89.13 | Show/hide |
Query: LEMVSMYFNSVWELVDLPKGVKPIGCKWIYQRKRDSAGKVHTFKARLVAKEYTEREGVDYEETFSLVAMLKSIRIFLSIATFYDYEIWKMVVKIAFLNGN
LEM SMYFNSVWELVDLP+GVKPIGCKWIY+RKRDSAGKV TFKARLVAK YT+REGVDYEETFS VAMLKSIRI LSIATFYDYEIW+M VK AFLNGN
Subjt: LEMVSMYFNSVWELVDLPKGVKPIGCKWIYQRKRDSAGKVHTFKARLVAKEYTEREGVDYEETFSLVAMLKSIRIFLSIATFYDYEIWKMVVKIAFLNGN
Query: LEESIFISQLEGFITQGHEQNVYKLNLSIYGLKQASRSWNIRFDIAIKSYDFDQNVDEPCVYKKINKGKVAFLVLYVDDILLKG
LEESIF+SQ EGFITQG EQ V KLN SIYGLKQASRSWNIRFD AIKSY FDQNVDEPCVYKKINKGKVAFLVLYVDDILL G
Subjt: LEESIFISQLEGFITQGHEQNVYKLNLSIYGLKQASRSWNIRFDIAIKSYDFDQNVDEPCVYKKINKGKVAFLVLYVDDILLKG
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 1.8e-27 | 36.07 | Show/hide |
Query: EMVSMYFNSVWELVDLPKGVKPIGCKWIYQRKRDSAGKVHTFKARLVAKEYTEREGVDYEETFSLVAMLKSIRIFLSIATFYDYEIWKMVVKIAFLNGNL
E+ + N+ W + P+ + +W++ K + G +KARLVA+ +T++ +DYEETF+ VA + S R LS+ Y+ ++ +M VK AFLNG L
Subjt: EMVSMYFNSVWELVDLPKGVKPIGCKWIYQRKRDSAGKVHTFKARLVAKEYTEREGVDYEETFSLVAMLKSIRIFLSIATFYDYEIWKMVVKIAFLNGNL
Query: EESIFISQLEGFITQGHEQNVYKLNLSIYGLKQASRSWNIRFDIAIKSYDFDQNVDEPCVY--KKINKGKVAFLVLYVDDILL
+E I++ +G + NV KLN +IYGLKQA+R W F+ A+K +F + + C+Y K N + +++LYVDD+++
Subjt: EESIFISQLEGFITQGHEQNVYKLNLSIYGLKQASRSWNIRFDIAIKSYDFDQNVDEPCVY--KKINKGKVAFLVLYVDDILL
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.5e-40 | 44.57 | Show/hide |
Query: EMVSMYFNSVWELVDLPKGVKPIGCKWIYQRKRDSAGKVHTFKARLVAKEYTEREGVDYEETFSLVAMLKSIRIFLSIATFYDYEIWKMVVKIAFLNGNL
EM S+ N ++LV+LPKG +P+ CKW+++ K+D K+ +KARLV K + +++G+D++E FS V + SIR LS+A D E+ ++ VK AFL+G+L
Subjt: EMVSMYFNSVWELVDLPKGVKPIGCKWIYQRKRDSAGKVHTFKARLVAKEYTEREGVDYEETFSLVAMLKSIRIFLSIATFYDYEIWKMVVKIAFLNGNL
Query: EESIFISQLEGFITQGHEQNVYKLNLSIYGLKQASRSWNIRFDIAIKSYDFDQNVDEPCVY-KKINKGKVAFLVLYVDDILLKG
EE I++ Q EGF G + V KLN S+YGLKQA R W ++FD +KS + + +PCVY K+ ++ L+LYVDD+L+ G
Subjt: EESIFISQLEGFITQGHEQNVYKLNLSIYGLKQASRSWNIRFDIAIKSYDFDQNVDEPCVY-KKINKGKVAFLVLYVDDILLKG
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| P92520 Uncharacterized mitochondrial protein AtMg00820 | 1.1e-08 | 37.97 | Show/hide |
Query: EMVSMYFNSVWELVDLPKGVKPIGCKWIYQRKRDSAGKVHTFKARLVAKEYTEREGVDYEETFSLVAMLKSIRIFLSIA
E+ ++ N W LV P +GCKW+++ K S G + KARLVAK + + EG+ + ET+S V +IR L++A
Subjt: EMVSMYFNSVWELVDLPKGVKPIGCKWIYQRKRDSAGKVHTFKARLVAKEYTEREGVDYEETFSLVAMLKSIRIFLSIA
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.5e-29 | 37.63 | Show/hide |
Query: GLEMVSMYFNSVWELVDLPKG-VKPIGCKWIYQRKRDSAGKVHTFKARLVAKEYTEREGVDYEETFSLVAMLKSIRIFLSIATFYDYEIWKMVVKIAFLN
G E+ + N W+LV P V +GC+WI+ +K +S G ++ +KARLVAK Y +R G+DY ETFS V SIRI L +A + I ++ V AFL
Subjt: GLEMVSMYFNSVWELVDLPKG-VKPIGCKWIYQRKRDSAGKVHTFKARLVAKEYTEREGVDYEETFSLVAMLKSIRIFLSIATFYDYEIWKMVVKIAFLN
Query: GNLEESIFISQLEGFITQGHEQNVYKLNLSIYGLKQASRSWNIRFDIAIKSYDFDQNVDEPCVYKKINKGKVAFLVLYVDDILLKG
G L + +++SQ GFI + V KL ++YGLKQA R+W + + + F +V + ++ + ++++YVDDIL+ G
Subjt: GNLEESIFISQLEGFITQGHEQNVYKLNLSIYGLKQASRSWNIRFDIAIKSYDFDQNVDEPCVYKKINKGKVAFLVLYVDDILLKG
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 8.8e-30 | 36.51 | Show/hide |
Query: QSHGLEMVSMYFNSVWELV-DLPKGVKPIGCKWIYQRKRDSAGKVHTFKARLVAKEYTEREGVDYEETFSLVAMLKSIRIFLSIATFYDYEIWKMVVKIA
Q+ G E+ + N W+LV P V +GC+WI+ +K +S G ++ +KARLVAK Y +R G+DY ETFS V SIRI L +A + I ++ V A
Subjt: QSHGLEMVSMYFNSVWELV-DLPKGVKPIGCKWIYQRKRDSAGKVHTFKARLVAKEYTEREGVDYEETFSLVAMLKSIRIFLSIATFYDYEIWKMVVKIA
Query: FLNGNLEESIFISQLEGFITQGHEQNVYKLNLSIYGLKQASRSWNIRFDIAIKSYDFDQNVDEPCVYKKINKGKVAFLVLYVDDILLKG
FL G L + +++SQ GF+ + V +L +IYGLKQA R+W + + + F ++ + ++ + ++++YVDDIL+ G
Subjt: FLNGNLEESIFISQLEGFITQGHEQNVYKLNLSIYGLKQASRSWNIRFDIAIKSYDFDQNVDEPCVYKKINKGKVAFLVLYVDDILLKG
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