| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0036855.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 5.5e-145 | 65.39 | Show/hide |
Query: MRGLEKIIKNEAIVRISDLDVNGKFFCGDCQIGKQTRSTHKSLKECYTNRVLKLLHMDLMRPMQTESLGGKRYVLVVVDDYSRYTWVFFLKGKTDTVEIC
+R L+K+I+NEA+V I LD+NGKFFCG+CQ+GKQT+++H+ LKECYT VL+LLH++LM PMQTESLGGK+YVLVVVDDYS++TWV FLK K DTV++C
Subjt: MRGLEKIIKNEAIVRISDLDVNGKFFCGDCQIGKQTRSTHKSLKECYTNRVLKLLHMDLMRPMQTESLGGKRYVLVVVDDYSRYTWVFFLKGKTDTVEIC
Query: KNLCLKLQREKEKKITRIRSDNGKEFDNECFNSFCLLKGIHHEFSAPITPQQNGVVERKNRTLQEMACVMIHAKNLPLCFWAEAVNTACHIHNRVTIRTR
+LCL LQREK +KI RIRSD+GKEFDNE N+ C +GIHHEF+APITPQQNGVVERKNR LQEMA VMIHAKN PL FWAE VNTACHIH RVT R
Subjt: KNLCLKLQREKEKKITRIRSDNGKEFDNECFNSFCLLKGIHHEFSAPITPQQNGVVERKNRTLQEMACVMIHAKNLPLCFWAEAVNTACHIHNRVTIRTR
Query: TTVTLYEFWKERKPNVKYFHVFGSICYILADREYRQKWDARSEQGIFLGYSQNSRAYRVFNNKSVSVMETINVVLNDLDSTIKQMIDEEDETSNMSEART
TT+TLYE WK RKPNVKYFH+FGS CYILADREY +KWD +S QGIFL YSQNSRAYRVFN KS +VME INVV+ND +S + Q E+DET +
Subjt: TTVTLYEFWKERKPNVKYFHVFGSICYILADREYRQKWDARSEQGIFLGYSQNSRAYRVFNNKSVSVMETINVVLNDLDSTIKQMIDEEDETSNMSEART
Query: TSTVEVSKADNPSDDLGKNLEKPSEEIITKKSELITFAHVKKNHPTSSIIGDPSAGMQTKRKEKIVYLNMVDDLCYTSTIKPSTVDSALKDEY
T E+ K D + N ++E+I ++ + AHVKKNHP+SSIIGD SAG+ T+RKEK+ Y+ M+ DLCY S I+P +V++ALKDEY
Subjt: TSTVEVSKADNPSDDLGKNLEKPSEEIITKKSELITFAHVKKNHPTSSIIGDPSAGMQTKRKEKIVYLNMVDDLCYTSTIKPSTVDSALKDEY
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| KAA0042995.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 1.8e-167 | 78.37 | Show/hide |
Query: MRGLEKIIKNEAIVRISDLDVNGKFFCGDCQIGKQTRSTHKSLKECYTNRVLKLLHMDLMRPMQTESLGGKRYVLVVVDDYSRYTWVFFLKGKTDTVEIC
MRGLEK+IKN+A+V I +LDVNG FFC DCQIGKQTRSTHKSLKECYTNRVL+LLHMDLM PMQT+SLG GKTDTVEIC
Subjt: MRGLEKIIKNEAIVRISDLDVNGKFFCGDCQIGKQTRSTHKSLKECYTNRVLKLLHMDLMRPMQTESLGGKRYVLVVVDDYSRYTWVFFLKGKTDTVEIC
Query: KNLCLKLQREKEKKITRIRSDNGKEFDNECFNSFCLLKGIHHEFSAPITPQQNGVVERKNRTLQEMACVMIHAKNLPLCFWAEAVNTACHIHNRVTIRTR
KNLCLKLQRE+ KKITRIRSD+GKEFDNE FNSFCLL+G HHEFSAPITPQQNGVVERKN+TLQEMA VMIHAKNLPLCF+AEAVNTACHIHNRVTIRT
Subjt: KNLCLKLQREKEKKITRIRSDNGKEFDNECFNSFCLLKGIHHEFSAPITPQQNGVVERKNRTLQEMACVMIHAKNLPLCFWAEAVNTACHIHNRVTIRTR
Query: TTVTLYEFWKERKPNVKYFHVFGSICYILADREYRQKWDARSEQGIFLGYSQNSRAYRVFNNKSVSVMETINVVLNDLDSTIKQMIDEEDETSNMSEART
TT+TLYE WKERK NVKYFHVFGS CYILADREY +KWDARSEQGIFL YSQ SRAYRV+NN+S SVMETIN +NDLDS IK M DEEDET NMSE RT
Subjt: TTVTLYEFWKERKPNVKYFHVFGSICYILADREYRQKWDARSEQGIFLGYSQNSRAYRVFNNKSVSVMETINVVLNDLDSTIKQMIDEEDETSNMSEART
Query: TSTVEVSKADNPSDDLGKNLEKPSEEIITKKSELITFAHVKKNHPTSSIIGDPSAGMQTKRKEKIVYLNMVDDLCYTSTIKPSTVDSALKDEY
TSTVE SKADN SD GK+L+K SEEII KK ELI AHV+KNHP SIIGDPSAGMQT+RK+KI YL MV +LCY STI+PSTVDSALK+EY
Subjt: TSTVEVSKADNPSDDLGKNLEKPSEEIITKKSELITFAHVKKNHPTSSIIGDPSAGMQTKRKEKIVYLNMVDDLCYTSTIKPSTVDSALKDEY
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| KAA0054354.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 9.7e-142 | 85.28 | Show/hide |
Query: MRGLEKIIKNEAIVRISDLDVNGKFFCGDCQIGKQTRSTHKSLKECYTNRVLKLLHMDLMRPMQTESLGGKRYVLVVVDDYSRYTWVFFLKGKTDTVEIC
MRGLEKIIKN+A+V I DL+VNG FFCG STHKS K CYTNRVL+LLHMDLMRPM+TES GGKRYVLVVV DYSRYTWV FL+GKTDTVEIC
Subjt: MRGLEKIIKNEAIVRISDLDVNGKFFCGDCQIGKQTRSTHKSLKECYTNRVLKLLHMDLMRPMQTESLGGKRYVLVVVDDYSRYTWVFFLKGKTDTVEIC
Query: KNLCLKLQREKEKKITRIRSDNGKEFDNECFNSFCLLKGIHHEFSAPITPQQNGVVERKNRTLQEMACVMIHAKNLPLCFWAEAVNTACHIHNRVTIRTR
KNLCLKLQREK KKITRIRSD+GKEFDNE FNSFCLL+GI HEFSAPITPQQNGVVERKNRTLQEMACVMIHAKNLP+CFWAEAVN ACHIHNRVTIRT
Subjt: KNLCLKLQREKEKKITRIRSDNGKEFDNECFNSFCLLKGIHHEFSAPITPQQNGVVERKNRTLQEMACVMIHAKNLPLCFWAEAVNTACHIHNRVTIRTR
Query: TTVTLYEFWKERKPNVKYFHVFGSICYILADREYRQKWDARSEQGIFLGYSQNSRAYRVFNNKSVSVMETINVVLNDLDSTIKQMIDEEDETSNMSEAR
TVTLYE WKERKPNVKYFHVFGS CYILADREYRQKWDARSEQGIFLGYSQNS AYRVFNN+S +V+ETINVV+NDLDS +KQM DEED+TSNMSEAR
Subjt: TTVTLYEFWKERKPNVKYFHVFGSICYILADREYRQKWDARSEQGIFLGYSQNSRAYRVFNNKSVSVMETINVVLNDLDSTIKQMIDEEDETSNMSEAR
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| KAA0060126.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 5.4e-124 | 59.29 | Show/hide |
Query: MRGLEKIIKNEAIVRISDLDVNGKFFCGDCQIGKQTRSTHKSLKECYTNRVLKLLHMDLMRPMQTESLGGKRYVLVVVDDYSRYTWVFFLKGKTDTVEIC
+R L+K+++N+A+V I LD+N KFFC +G GG++YVLVVVDDYSR+TWV FLKGK DT ++C
Subjt: MRGLEKIIKNEAIVRISDLDVNGKFFCGDCQIGKQTRSTHKSLKECYTNRVLKLLHMDLMRPMQTESLGGKRYVLVVVDDYSRYTWVFFLKGKTDTVEIC
Query: KNLCLKLQREKEKKITRIRSDNGKEFDNECFNSFCLLKGIHHEFSAPITPQQNGVVERKNRTLQEMACVMIHAKNLPLCFWAEAVNTACHIHNRVTIRTR
NLCL LQREK +KI RIR ++G EF+NE N+FC +GIHHEF+APITPQQNGVVERKNRTLQEMA VMIHAKNLPL FWAEAVNTACHIH+RVT R+
Subjt: KNLCLKLQREKEKKITRIRSDNGKEFDNECFNSFCLLKGIHHEFSAPITPQQNGVVERKNRTLQEMACVMIHAKNLPLCFWAEAVNTACHIHNRVTIRTR
Query: TTVTLYEFWKERKPNVKYFHVFGSICYILADREYRQKWDARSEQGIFLGYSQNSRAYRVFNNKSVSVMETINVVLNDLDSTIKQMIDEEDETSNMSEART
TTVTLYE WK RKPN+KYFH+FGSICYILADR+Y +KWD +S+Q IFLGYSQNSRAYRVFN KS +VMETINVV+ND +S I Q E DET E +
Subjt: TTVTLYEFWKERKPNVKYFHVFGSICYILADREYRQKWDARSEQGIFLGYSQNSRAYRVFNNKSVSVMETINVVLNDLDSTIKQMIDEEDETSNMSEART
Query: TSTVEVSKADNPSDDLGKNLEKPSEEIITKKSELITFAHVKKNHPTSSIIGDPSAGMQTKRKEKIVYLNMVDDLCYTSTIKPSTVDSALKDEY
T E+SK ++ D K ++E+I ++ L+ AHVKKNHP SS+IGDPSAG+ T+RKEK+ Y M+ DLCY S I+P++V++ALKDEY
Subjt: TSTVEVSKADNPSDDLGKNLEKPSEEIITKKSELITFAHVKKNHPTSSIIGDPSAGMQTKRKEKIVYLNMVDDLCYTSTIKPSTVDSALKDEY
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| TYK07876.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 1.7e-117 | 68.02 | Show/hide |
Query: RVLKLLHMDLMRPMQTESLGGKRYVLVVVDDYSRYTWVFFLKGKTDTVEICKNLCLKLQREKEKKITRIRSDNGKEFDNECFNSFCLLKGIHHEFSAPIT
RVL+LLHMDLM PMQTESLGGKRYVLVV DDYSRYTWV FLKG+TD VEICKNLCLKLQRE KGIHHEFSAP+T
Subjt: RVLKLLHMDLMRPMQTESLGGKRYVLVVVDDYSRYTWVFFLKGKTDTVEICKNLCLKLQREKEKKITRIRSDNGKEFDNECFNSFCLLKGIHHEFSAPIT
Query: PQQNGVVERKNRTLQEMACVMIHAKNLPLCFWAEAVNTACHIHNRVTIRTRTTVTLYEFWKERKPNVKYFHVFGSICYILADREYRQKWDARSEQGIFLG
PQQNGVVERK RTLQEMA VMIHAKNLPLCFWA+ V+TACHIHNRVTIRT TTVTLY+ WKERKPNVKYFHVFGS CYILADREYRQKWDARSEQGIFLG
Subjt: PQQNGVVERKNRTLQEMACVMIHAKNLPLCFWAEAVNTACHIHNRVTIRTRTTVTLYEFWKERKPNVKYFHVFGSICYILADREYRQKWDARSEQGIFLG
Query: YSQNSRAYRVFNNKSVSVMETINVVLNDLDSTIKQMIDEEDETSNMSEARTTSTVEVSKADNPSDDLGKNLEKPSEEIITKKSELITFAHVKKNHPTSSI
YSQNSRAYRVFNN+S SVM+TINVV+ LDSTIKQM DEED+T NMSEARTTS
Subjt: YSQNSRAYRVFNNKSVSVMETINVVLNDLDSTIKQMIDEEDETSNMSEARTTSTVEVSKADNPSDDLGKNLEKPSEEIITKKSELITFAHVKKNHPTSSI
Query: IGDPSAGMQTKRKEKIVYLNMVDDLCYTSTIKPSTVDSALKDEY
DPS MQT+RK+KI YL MV DLCYTSTI+PSTVDSA+KDEY
Subjt: IGDPSAGMQTKRKEKIVYLNMVDDLCYTSTIKPSTVDSALKDEY
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TNK7 Gag-pol polyprotein | 8.5e-168 | 78.37 | Show/hide |
Query: MRGLEKIIKNEAIVRISDLDVNGKFFCGDCQIGKQTRSTHKSLKECYTNRVLKLLHMDLMRPMQTESLGGKRYVLVVVDDYSRYTWVFFLKGKTDTVEIC
MRGLEK+IKN+A+V I +LDVNG FFC DCQIGKQTRSTHKSLKECYTNRVL+LLHMDLM PMQT+SLG GKTDTVEIC
Subjt: MRGLEKIIKNEAIVRISDLDVNGKFFCGDCQIGKQTRSTHKSLKECYTNRVLKLLHMDLMRPMQTESLGGKRYVLVVVDDYSRYTWVFFLKGKTDTVEIC
Query: KNLCLKLQREKEKKITRIRSDNGKEFDNECFNSFCLLKGIHHEFSAPITPQQNGVVERKNRTLQEMACVMIHAKNLPLCFWAEAVNTACHIHNRVTIRTR
KNLCLKLQRE+ KKITRIRSD+GKEFDNE FNSFCLL+G HHEFSAPITPQQNGVVERKN+TLQEMA VMIHAKNLPLCF+AEAVNTACHIHNRVTIRT
Subjt: KNLCLKLQREKEKKITRIRSDNGKEFDNECFNSFCLLKGIHHEFSAPITPQQNGVVERKNRTLQEMACVMIHAKNLPLCFWAEAVNTACHIHNRVTIRTR
Query: TTVTLYEFWKERKPNVKYFHVFGSICYILADREYRQKWDARSEQGIFLGYSQNSRAYRVFNNKSVSVMETINVVLNDLDSTIKQMIDEEDETSNMSEART
TT+TLYE WKERK NVKYFHVFGS CYILADREY +KWDARSEQGIFL YSQ SRAYRV+NN+S SVMETIN +NDLDS IK M DEEDET NMSE RT
Subjt: TTVTLYEFWKERKPNVKYFHVFGSICYILADREYRQKWDARSEQGIFLGYSQNSRAYRVFNNKSVSVMETINVVLNDLDSTIKQMIDEEDETSNMSEART
Query: TSTVEVSKADNPSDDLGKNLEKPSEEIITKKSELITFAHVKKNHPTSSIIGDPSAGMQTKRKEKIVYLNMVDDLCYTSTIKPSTVDSALKDEY
TSTVE SKADN SD GK+L+K SEEII KK ELI AHV+KNHP SIIGDPSAGMQT+RK+KI YL MV +LCY STI+PSTVDSALK+EY
Subjt: TSTVEVSKADNPSDDLGKNLEKPSEEIITKKSELITFAHVKKNHPTSSIIGDPSAGMQTKRKEKIVYLNMVDDLCYTSTIKPSTVDSALKDEY
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| A0A5A7V0X1 Gag-pol polyprotein | 2.6e-124 | 59.29 | Show/hide |
Query: MRGLEKIIKNEAIVRISDLDVNGKFFCGDCQIGKQTRSTHKSLKECYTNRVLKLLHMDLMRPMQTESLGGKRYVLVVVDDYSRYTWVFFLKGKTDTVEIC
+R L+K+++N+A+V I LD+N KFFC +G GG++YVLVVVDDYSR+TWV FLKGK DT ++C
Subjt: MRGLEKIIKNEAIVRISDLDVNGKFFCGDCQIGKQTRSTHKSLKECYTNRVLKLLHMDLMRPMQTESLGGKRYVLVVVDDYSRYTWVFFLKGKTDTVEIC
Query: KNLCLKLQREKEKKITRIRSDNGKEFDNECFNSFCLLKGIHHEFSAPITPQQNGVVERKNRTLQEMACVMIHAKNLPLCFWAEAVNTACHIHNRVTIRTR
NLCL LQREK +KI RIR ++G EF+NE N+FC +GIHHEF+APITPQQNGVVERKNRTLQEMA VMIHAKNLPL FWAEAVNTACHIH+RVT R+
Subjt: KNLCLKLQREKEKKITRIRSDNGKEFDNECFNSFCLLKGIHHEFSAPITPQQNGVVERKNRTLQEMACVMIHAKNLPLCFWAEAVNTACHIHNRVTIRTR
Query: TTVTLYEFWKERKPNVKYFHVFGSICYILADREYRQKWDARSEQGIFLGYSQNSRAYRVFNNKSVSVMETINVVLNDLDSTIKQMIDEEDETSNMSEART
TTVTLYE WK RKPN+KYFH+FGSICYILADR+Y +KWD +S+Q IFLGYSQNSRAYRVFN KS +VMETINVV+ND +S I Q E DET E +
Subjt: TTVTLYEFWKERKPNVKYFHVFGSICYILADREYRQKWDARSEQGIFLGYSQNSRAYRVFNNKSVSVMETINVVLNDLDSTIKQMIDEEDETSNMSEART
Query: TSTVEVSKADNPSDDLGKNLEKPSEEIITKKSELITFAHVKKNHPTSSIIGDPSAGMQTKRKEKIVYLNMVDDLCYTSTIKPSTVDSALKDEY
T E+SK ++ D K ++E+I ++ L+ AHVKKNHP SS+IGDPSAG+ T+RKEK+ Y M+ DLCY S I+P++V++ALKDEY
Subjt: TSTVEVSKADNPSDDLGKNLEKPSEEIITKKSELITFAHVKKNHPTSSIIGDPSAGMQTKRKEKIVYLNMVDDLCYTSTIKPSTVDSALKDEY
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| A0A5D3BA69 Gag-pol polyprotein | 2.7e-145 | 65.39 | Show/hide |
Query: MRGLEKIIKNEAIVRISDLDVNGKFFCGDCQIGKQTRSTHKSLKECYTNRVLKLLHMDLMRPMQTESLGGKRYVLVVVDDYSRYTWVFFLKGKTDTVEIC
+R L+K+I+NEA+V I LD+NGKFFCG+CQ+GKQT+++H+ LKECYT VL+LLH++LM PMQTESLGGK+YVLVVVDDYS++TWV FLK K DTV++C
Subjt: MRGLEKIIKNEAIVRISDLDVNGKFFCGDCQIGKQTRSTHKSLKECYTNRVLKLLHMDLMRPMQTESLGGKRYVLVVVDDYSRYTWVFFLKGKTDTVEIC
Query: KNLCLKLQREKEKKITRIRSDNGKEFDNECFNSFCLLKGIHHEFSAPITPQQNGVVERKNRTLQEMACVMIHAKNLPLCFWAEAVNTACHIHNRVTIRTR
+LCL LQREK +KI RIRSD+GKEFDNE N+ C +GIHHEF+APITPQQNGVVERKNR LQEMA VMIHAKN PL FWAE VNTACHIH RVT R
Subjt: KNLCLKLQREKEKKITRIRSDNGKEFDNECFNSFCLLKGIHHEFSAPITPQQNGVVERKNRTLQEMACVMIHAKNLPLCFWAEAVNTACHIHNRVTIRTR
Query: TTVTLYEFWKERKPNVKYFHVFGSICYILADREYRQKWDARSEQGIFLGYSQNSRAYRVFNNKSVSVMETINVVLNDLDSTIKQMIDEEDETSNMSEART
TT+TLYE WK RKPNVKYFH+FGS CYILADREY +KWD +S QGIFL YSQNSRAYRVFN KS +VME INVV+ND +S + Q E+DET +
Subjt: TTVTLYEFWKERKPNVKYFHVFGSICYILADREYRQKWDARSEQGIFLGYSQNSRAYRVFNNKSVSVMETINVVLNDLDSTIKQMIDEEDETSNMSEART
Query: TSTVEVSKADNPSDDLGKNLEKPSEEIITKKSELITFAHVKKNHPTSSIIGDPSAGMQTKRKEKIVYLNMVDDLCYTSTIKPSTVDSALKDEY
T E+ K D + N ++E+I ++ + AHVKKNHP+SSIIGD SAG+ T+RKEK+ Y+ M+ DLCY S I+P +V++ALKDEY
Subjt: TSTVEVSKADNPSDDLGKNLEKPSEEIITKKSELITFAHVKKNHPTSSIIGDPSAGMQTKRKEKIVYLNMVDDLCYTSTIKPSTVDSALKDEY
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| A0A5D3CBZ0 Gag-pol polyprotein | 8.1e-118 | 68.02 | Show/hide |
Query: RVLKLLHMDLMRPMQTESLGGKRYVLVVVDDYSRYTWVFFLKGKTDTVEICKNLCLKLQREKEKKITRIRSDNGKEFDNECFNSFCLLKGIHHEFSAPIT
RVL+LLHMDLM PMQTESLGGKRYVLVV DDYSRYTWV FLKG+TD VEICKNLCLKLQRE KGIHHEFSAP+T
Subjt: RVLKLLHMDLMRPMQTESLGGKRYVLVVVDDYSRYTWVFFLKGKTDTVEICKNLCLKLQREKEKKITRIRSDNGKEFDNECFNSFCLLKGIHHEFSAPIT
Query: PQQNGVVERKNRTLQEMACVMIHAKNLPLCFWAEAVNTACHIHNRVTIRTRTTVTLYEFWKERKPNVKYFHVFGSICYILADREYRQKWDARSEQGIFLG
PQQNGVVERK RTLQEMA VMIHAKNLPLCFWA+ V+TACHIHNRVTIRT TTVTLY+ WKERKPNVKYFHVFGS CYILADREYRQKWDARSEQGIFLG
Subjt: PQQNGVVERKNRTLQEMACVMIHAKNLPLCFWAEAVNTACHIHNRVTIRTRTTVTLYEFWKERKPNVKYFHVFGSICYILADREYRQKWDARSEQGIFLG
Query: YSQNSRAYRVFNNKSVSVMETINVVLNDLDSTIKQMIDEEDETSNMSEARTTSTVEVSKADNPSDDLGKNLEKPSEEIITKKSELITFAHVKKNHPTSSI
YSQNSRAYRVFNN+S SVM+TINVV+ LDSTIKQM DEED+T NMSEARTTS
Subjt: YSQNSRAYRVFNNKSVSVMETINVVLNDLDSTIKQMIDEEDETSNMSEARTTSTVEVSKADNPSDDLGKNLEKPSEEIITKKSELITFAHVKKNHPTSSI
Query: IGDPSAGMQTKRKEKIVYLNMVDDLCYTSTIKPSTVDSALKDEY
DPS MQT+RK+KI YL MV DLCYTSTI+PSTVDSA+KDEY
Subjt: IGDPSAGMQTKRKEKIVYLNMVDDLCYTSTIKPSTVDSALKDEY
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| A0A5D3CM30 Gag-pol polyprotein | 4.7e-142 | 85.28 | Show/hide |
Query: MRGLEKIIKNEAIVRISDLDVNGKFFCGDCQIGKQTRSTHKSLKECYTNRVLKLLHMDLMRPMQTESLGGKRYVLVVVDDYSRYTWVFFLKGKTDTVEIC
MRGLEKIIKN+A+V I DL+VNG FFCG STHKS K CYTNRVL+LLHMDLMRPM+TES GGKRYVLVVV DYSRYTWV FL+GKTDTVEIC
Subjt: MRGLEKIIKNEAIVRISDLDVNGKFFCGDCQIGKQTRSTHKSLKECYTNRVLKLLHMDLMRPMQTESLGGKRYVLVVVDDYSRYTWVFFLKGKTDTVEIC
Query: KNLCLKLQREKEKKITRIRSDNGKEFDNECFNSFCLLKGIHHEFSAPITPQQNGVVERKNRTLQEMACVMIHAKNLPLCFWAEAVNTACHIHNRVTIRTR
KNLCLKLQREK KKITRIRSD+GKEFDNE FNSFCLL+GI HEFSAPITPQQNGVVERKNRTLQEMACVMIHAKNLP+CFWAEAVN ACHIHNRVTIRT
Subjt: KNLCLKLQREKEKKITRIRSDNGKEFDNECFNSFCLLKGIHHEFSAPITPQQNGVVERKNRTLQEMACVMIHAKNLPLCFWAEAVNTACHIHNRVTIRTR
Query: TTVTLYEFWKERKPNVKYFHVFGSICYILADREYRQKWDARSEQGIFLGYSQNSRAYRVFNNKSVSVMETINVVLNDLDSTIKQMIDEEDETSNMSEAR
TVTLYE WKERKPNVKYFHVFGS CYILADREYRQKWDARSEQGIFLGYSQNS AYRVFNN+S +V+ETINVV+NDLDS +KQM DEED+TSNMSEAR
Subjt: TTVTLYEFWKERKPNVKYFHVFGSICYILADREYRQKWDARSEQGIFLGYSQNSRAYRVFNNKSVSVMETINVVLNDLDSTIKQMIDEEDETSNMSEAR
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 1.5e-31 | 28.7 | Show/hide |
Query: CGDCQIGKQTRSTHKSLKE-CYTNRVLKLLHMDLMRPMQTESLGGKRYVLVVVDDYSRYTWVFFLKGKTDTVEICKNLCLKLQREKEKKITRIRSDNGKE
C C GKQ R K LK+ + R L ++H D+ P+ +L K Y ++ VD ++ Y + +K K+D + ++ K + K+ + DNG+E
Subjt: CGDCQIGKQTRSTHKSLKE-CYTNRVLKLLHMDLMRPMQTESLGGKRYVLVVVDDYSRYTWVFFLKGKTDTVEICKNLCLKLQREKEKKITRIRSDNGKE
Query: FDNECFNSFCLLKGIHHEFSAPITPQQNGVVERKNRTLQEMACVMIHAKNLPLCFWAEAVNTACHIHNRVTIR--TRTTVTLYEFWKERKPNVKYFHVFG
+ + FC+ KGI + + P TPQ NGV ER RT+ E A M+ L FW EAV TA ++ NR+ R ++ T YE W +KP +K+ VFG
Subjt: FDNECFNSFCLLKGIHHEFSAPITPQQNGVVERKNRTLQEMACVMIHAKNLPLCFWAEAVNTACHIHNRVTIR--TRTTVTLYEFWKERKPNVKYFHVFG
Query: SICYILADREYRQKWDARSEQGIFLGYSQNS-RAYRVFNNKSVSVMETINVVLNDLDSTIKQMIDEEDETSNMSEARTTSTVEVSKADNPSDDLGKNLEK
+ Y+ + + K+D +S + IF+GY N + + N K + + + +DE +NM +R V D+ + KN
Subjt: SICYILADREYRQKWDARSEQGIFLGYSQNS-RAYRVFNNKSVSVMETINVVLNDLDSTIKQMIDEEDETSNMSEARTTSTVEVSKADNPSDDLGKNLEK
Query: PSEEII-------TKKSELITFAHVKKNHPTSSIIGDPSAGMQTK
S +II +K+ + I F K + D +QT+
Subjt: PSEEII-------TKKSELITFAHVKKNHPTSSIIGDPSAGMQTK
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 7.2e-39 | 30.86 | Show/hide |
Query: CGDCQIGKQTRSTHKSLKECYTNRVLKLLHMDLMRPMQTESLGGKRYVLVVVDDYSRYTWVFFLKGKTDTVEICKNLCLKLQREKEKKITRIRSDNGKEF
C C GKQ R + ++ E N +L L++ D+ PM+ ES+GG +Y + +DD SR WV+ LK K ++ + ++RE +K+ R+RSDNG E+
Subjt: CGDCQIGKQTRSTHKSLKECYTNRVLKLLHMDLMRPMQTESLGGKRYVLVVVDDYSRYTWVFFLKGKTDTVEICKNLCLKLQREKEKKITRIRSDNGKEF
Query: DNECFNSFCLLKGIHHEFSAPITPQQNGVVERKNRTLQEMACVMIHAKNLPLCFWAEAVNTACHIHNRVTIRTRTTVTLYEFWKERKPNVKYFHVFGSIC
+ F +C GI HE + P TPQ NGV ER NRT+ E M+ LP FW EAV TAC++ NR W ++ + + VFG
Subjt: DNECFNSFCLLKGIHHEFSAPITPQQNGVVERKNRTLQEMACVMIHAKNLPLCFWAEAVNTACHIHNRVTIRTRTTVTLYEFWKERKPNVKYFHVFGSIC
Query: YILADREYRQKWDARSEQGIFLGYSQNSRAYRVFNNKSVSVMETINVVLNDLDSTIKQMIDEEDETSNMSEARTTSTVEVS----KADNPSDDLGKNLEK
+ +E R K D +S IF+GY YR+++ V+ + +VV +S ++ D ++ N + S A++ +D++ + E+
Subjt: YILADREYRQKWDARSEQGIFLGYSQNSRAYRVFNNKSVSVMETINVVLNDLDSTIKQMIDEEDETSNMSEARTTSTVEVS----KADNPSDDLGKNLEK
Query: PSEEIITKKSELITFAHVKKNHPT
P E + ++ E + + HPT
Subjt: PSEEIITKKSELITFAHVKKNHPT
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| Q87040 Pro-Pol polyprotein | 7.3e-07 | 35.05 | Show/hide |
Query: GKRYVLVVVDDYSRYTWVFFLKGKTDTVEICKNLCLKLQREKEKKITRIRSDNGKEFDNECFNSFCLLKGIHHEFSAPITPQQNGVVERKNRTLQEM
G YVLV+VD + +TW++ K + + + K+L + K I SD G F + F + +GIH EFS P PQ +G VERKN ++ +
Subjt: GKRYVLVVVDDYSRYTWVFFLKGKTDTVEICKNLCLKLQREKEKKITRIRSDNGKEFDNECFNSFCLLKGIHHEFSAPITPQQNGVVERKNRTLQEM
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 6.4e-19 | 27.27 | Show/hide |
Query: LEKIIKNEAIVRISDLDVNGKFF-CGDCQIGKQTRSTHKSLKECYTNRVLKLLHMDLMRPMQTESLGGKRYVLVVVDDYSRYTWVFFLKGKTDTVEICKN
L +I N + +S L+ + KF C DC I K + S + R L+ ++ D+ S RY ++ VD ++RYTW++ LK K+ E
Subjt: LEKIIKNEAIVRISDLDVNGKFF-CGDCQIGKQTRSTHKSLKECYTNRVLKLLHMDLMRPMQTESLGGKRYVLVVVDDYSRYTWVFFLKGKTDTVEICKN
Query: LCLKLQREKEKKITRIRSDNGKEFDNECFNSFCLLKGIHHEFSAPITPQQNGVVERKNRTLQEMACVMIHAKNLPLCFWAEAVNTACHIHNRVTIRTRTT
L+ + +I SDNG EF + GI H S P TP+ NG+ ERK+R + E ++ ++P +W A A ++ NR+
Subjt: LCLKLQREKEKKITRIRSDNGKEFDNECFNSFCLLKGIHHEFSAPITPQQNGVVERKNRTLQEMACVMIHAKNLPLCFWAEAVNTACHIHNRVTIRTRTT
Query: VTLYEFWKERKPNVKYFHVFGSICYILADREYRQKWDARSEQGIFLGYSQNSRAY--------RVFNNKSVSVMETINVVLNDLDSTIKQMIDEEDETSN
+ ++ PN VFG CY + K D +S Q +FLGYS AY R++ ++ V E N L +T+ + ++ E+S
Subjt: VTLYEFWKERKPNVKYFHVFGSICYILADREYRQKWDARSEQGIFLGYSQNSRAY--------RVFNNKSVSVMETINVVLNDLDSTIKQMIDEEDETSN
Query: MSEARTTSTVEVSKADNPS
+ TT PS
Subjt: MSEARTTSTVEVSKADNPS
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 6.8e-21 | 30.38 | Show/hide |
Query: CGDCQIGKQTRSTHK---SLKECYTNRVLKLLHMDLMRPMQTESLGGKRYVLVVVDDYSRYTWVFFLKGKT---DTVEICKNLCLKLQREKEKKITRIRS
C DC I K +HK S +++ L+ ++ D+ S+ RY ++ VD ++RYTW++ LK K+ DT I K+L ++ + +I + S
Subjt: CGDCQIGKQTRSTHK---SLKECYTNRVLKLLHMDLMRPMQTESLGGKRYVLVVVDDYSRYTWVFFLKGKT---DTVEICKNLCLKLQREKEKKITRIRS
Query: DNGKEFDNECFNSFCLLKGIHHEFSAPITPQQNGVVERKNRTLQEMACVMIHAKNLPLCFWAEAVNTACHIHNRVTIRTRTTVTLYEFWKERKPNVKYFH
DNG EF + GI H S P TP+ NG+ ERK+R + EM ++ ++P +W A + A ++ NR+ + ++ + PN +
Subjt: DNGKEFDNECFNSFCLLKGIHHEFSAPITPQQNGVVERKNRTLQEMACVMIHAKNLPLCFWAEAVNTACHIHNRVTIRTRTTVTLYEFWKERKPNVKYFH
Query: VFGSICYILADREYRQKWDARSEQGIFLGYSQNSRAY
VFG CY R K + +S+Q F+GYS AY
Subjt: VFGSICYILADREYRQKWDARSEQGIFLGYSQNSRAY
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