; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc08g0225391 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc08g0225391
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRetrotransposon protein
Genome locationCMiso1.1chr08:16325688..16329967
RNA-Seq ExpressionCmc08g0225391
SyntenyCmc08g0225391
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051644.1 retrotransposon protein [Cucumis melo var. makuwa]1.4e-1866.67Show/hide
Query:  DQLRAIVEWPSVALQNETTVHQEVLCQLHAIPELSRLDRVHYSRILFCNLDDMRGFLEILEDEKMDFCTVLLRED
        D LRAIVE P   LQ+ETT+ +EVL QL+A+P+LSRLDR H S  LF +LDDM GF+EI+E+E+MD+CTVLLRED
Subjt:  DQLRAIVEWPSVALQNETTVHQEVLCQLHAIPELSRLDRVHYSRILFCNLDDMRGFLEILEDEKMDFCTVLLRED
KAA0056139.1 retrotransposon protein [Cucumis melo var. makuwa]1.1e-3696.3Show/hide
Query:  MKCVNDQLRAIVEWPSVALQNETTVHQEVLCQLHAIPELSRLDRVHYSRILFCNLDDMRGFLEILEDEKMDFCTVLLREDS
        MKC NDQLR IVEW SVALQNETTVHQEVLCQLHAIPELSRLDRVHYSRILFCNLDDMRGFLEILEDEKMDFCTVLLREDS
Subjt:  MKCVNDQLRAIVEWPSVALQNETTVHQEVLCQLHAIPELSRLDRVHYSRILFCNLDDMRGFLEILEDEKMDFCTVLLREDS
KAA0066061.1 retrotransposon protein [Cucumis melo var. makuwa]1.5e-1755.7Show/hide
Query:  CVNDQLRAIVEWPSVALQNETTVHQEVLCQLHAIPELSRLDRVHYSRILFCNLDDMRGFLEILEDEKMDFCTVLLREDS
        CVNDQLRAIVEWP  A  N+T V QE LC L A+P+LS LDR    R+L C++DDMR F+E+ ++E+ ++C + LR+DS
Subjt:  CVNDQLRAIVEWPSVALQNETTVHQEVLCQLHAIPELSRLDRVHYSRILFCNLDDMRGFLEILEDEKMDFCTVLLREDS
TYK02497.1 retrotransposon protein [Cucumis melo var. makuwa]6.3e-1965.79Show/hide
Query:  DQLRAIVEWPSVALQNETTVHQEVLCQLHAIPELSRLDRVHYSRILFCNLDDMRGFLEILEDEKMDFCTVLLREDS
        + LRAI +WP VAL+N+TTV QEVL QL A+ ELSRL+R  YS+ILF +LDDMRGFL+++++EKMDF T+LL+EDS
Subjt:  DQLRAIVEWPSVALQNETTVHQEVLCQLHAIPELSRLDRVHYSRILFCNLDDMRGFLEILEDEKMDFCTVLLREDS
TYK14144.1 retrotransposon protein [Cucumis melo var. makuwa]5.8e-3394.81Show/hide
Query:  CVNDQLRAIVEWPSVALQNETTVHQEVLCQLHAIPELSRLDRVHYSRILFCNLDDMRGFLEILEDEKMDFCTVLLRE
        C NDQLRAIVEWPSVALQNETTV QEVLCQLHAIPELSRLD VH SRILFCNLDDMRGFLEILEDEKMDFCTVLLRE
Subjt:  CVNDQLRAIVEWPSVALQNETTVHQEVLCQLHAIPELSRLDRVHYSRILFCNLDDMRGFLEILEDEKMDFCTVLLRE
TrEMBL top hitse value%identityAlignment
A0A5A7URM1 Retrotransposon protein5.5e-3796.3Show/hide
Query:  MKCVNDQLRAIVEWPSVALQNETTVHQEVLCQLHAIPELSRLDRVHYSRILFCNLDDMRGFLEILEDEKMDFCTVLLREDS
        MKC NDQLR IVEW SVALQNETTVHQEVLCQLHAIPELSRLDRVHYSRILFCNLDDMRGFLEILEDEKMDFCTVLLREDS
Subjt:  MKCVNDQLRAIVEWPSVALQNETTVHQEVLCQLHAIPELSRLDRVHYSRILFCNLDDMRGFLEILEDEKMDFCTVLLREDS
A0A5D3BFC4 Retrotransposon protein6.7e-1966.67Show/hide
Query:  DQLRAIVEWPSVALQNETTVHQEVLCQLHAIPELSRLDRVHYSRILFCNLDDMRGFLEILEDEKMDFCTVLLRED
        D LRAIVE P   LQ+ETT+ +EVL QL+A+P+LSRLDR H S  LF +LDDM GF+EI+E+E+MD+CTVLLRED
Subjt:  DQLRAIVEWPSVALQNETTVHQEVLCQLHAIPELSRLDRVHYSRILFCNLDDMRGFLEILEDEKMDFCTVLLRED
A0A5D3BL06 Retrotransposon protein7.5e-1855.7Show/hide
Query:  CVNDQLRAIVEWPSVALQNETTVHQEVLCQLHAIPELSRLDRVHYSRILFCNLDDMRGFLEILEDEKMDFCTVLLREDS
        CVNDQLRAIVEWP  A  N+T V QE LC L A+P+LS LDR    R+L C++DDMR F+E+ ++E+ ++C + LR+DS
Subjt:  CVNDQLRAIVEWPSVALQNETTVHQEVLCQLHAIPELSRLDRVHYSRILFCNLDDMRGFLEILEDEKMDFCTVLLREDS
A0A5D3BSS7 Retrotransposon protein3.0e-1965.79Show/hide
Query:  DQLRAIVEWPSVALQNETTVHQEVLCQLHAIPELSRLDRVHYSRILFCNLDDMRGFLEILEDEKMDFCTVLLREDS
        + LRAI +WP VAL+N+TTV QEVL QL A+ ELSRL+R  YS+ILF +LDDMRGFL+++++EKMDF T+LL+EDS
Subjt:  DQLRAIVEWPSVALQNETTVHQEVLCQLHAIPELSRLDRVHYSRILFCNLDDMRGFLEILEDEKMDFCTVLLREDS
A0A5D3CSY3 Retrotransposon protein2.8e-3394.81Show/hide
Query:  CVNDQLRAIVEWPSVALQNETTVHQEVLCQLHAIPELSRLDRVHYSRILFCNLDDMRGFLEILEDEKMDFCTVLLRE
        C NDQLRAIVEWPSVALQNETTV QEVLCQLHAIPELSRLD VH SRILFCNLDDMRGFLEILEDEKMDFCTVLLRE
Subjt:  CVNDQLRAIVEWPSVALQNETTVHQEVLCQLHAIPELSRLDRVHYSRILFCNLDDMRGFLEILEDEKMDFCTVLLRE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTGTGTGAATGACCAACTAAGGGCCATTGTTGAGTGGCCTTCTGTTGCGCTTCAGAATGAAACCACAGTTCACCAGGAAGTCCTTTGCCAATTGCATGCGATCCC
CGAACTAAGTAGGTTGGACAGGGTGCACTACTCGCGAATCCTCTTTTGCAATTTAGACGACATGAGAGGTTTCCTTGAGATACTTGAGGACGAGAAGATGGACTTCTGCA
CGGTCCTTCTACGAGAAGACTCTTGA
mRNA sequenceShow/hide mRNA sequence
TCTATTTTTGTAGTTTATTTCTGTTCCTTGCTTTTTGTGTTTGTATTTTGCTTGATTTACCAATTTTGTTTCTATGTTTGTATGTGAAATATGTTCTGTTGAGGTTGTTC
TTTCGTCTCTGTGAGGATTCGACCTTTTTGGAAACTTTCTGAATTCTAAACTTGTGCTACCCTGTTTTTGTAATTTTTCTTTACTTGCATTTACTACTTTATATTTCAAT
ATTTGATGAATGACCGGTCTTATGGGGAATCTATTTGGCCACCTAATATGTTCCTTGCAGATTGTTTTGTCTCTCCAATCCTTTTGACAGTATTTTCTTTGTGTACTAAA
TGGGGTAGCTTACATGGTTAGAGTTTGACTATTGTTGGATTTTTCTCCTTTTTATCTTGTCAATTGTAGAGATCGTAGAGATTCTTCTCCATTTTTTGGTTTGTGGTCAT
TAAAGGCATCATAACTTTTATCATCCCCCTATATATACATCAACCCTCTTTTGTCATATTACTTGTTTTTAAGTTCATTGGTTGTTGGTCACTGTTTTGTTCCTTCTTCT
TTGGTAGGTTACCTTCTTTTTCTATATTATTGTCATCTTCCATCCCTTTTTGCCTTCCATCCCTGTTTTGCTCCATGTTATCATTACTGTCATTCACGTATGTTGCAATC
TTTTCATTCATGTTTCAACTACTACAAATTCGGTTAAAATCTCTTTATATGCTTTTACTTGCATCTTTCCATTTCGTTGGTTGTTTGTGTGTCCTTTGTTGTTTCTTCTA
TTTTAGTTCACTTTCTCTTTTTCATATTATTATCATTCTTCATCCCTTTCTACCTTGTTTTGTATCTATGCTCCATGTTATTATTAGTGCTTACGTGTGTTGCAATCTTT
TAATTGATGTTTCAACTACTATAAATTCGTTTAAAATTGCTTTATATGGTTTTACTTACATCTTTTGAGTTCATTGGTTGTTTTTGTGTCCTCTGTTTCTTCTCCTTTGG
TAGTTCACTTTTTTTCTTCTATATTATTATCATCTTCCATCCCTTTCTGCCTTGTTTTGTATCTATGCTCCATGTAATTTGTGTTTGTTCCTTGTTTTGCATATTTTTAA
TTAATGTTTCCACTACTAGAAATTCGATTCAAATTATTGAACAAATTTTTTTCCTCTAAAGCTACTTTTTTTCTAAAATCGTATACATTTTCATGTTTACTATTATCGAG
CTTCGTTAATCTTCATTTCGGGTCCATTCGTCGACGTACAAGGTACGTATTGGTTATGTTTATTTTATTTGACAAGTTTCAACTACTCATCTCAATTACAATAGTTCGTG
CAAATGTTACTGTGTAGTTTCCTAATTTTCTTTTTCTTCTACAAGACGTCGACCTTTATTACCCTCGTATACTACAAATTAGCCGTTAGTAGTATATTTTATATTTTCTT
GTTTTCTTTCTTTCTGTTTATGGTTAGCACATTGTAATTTAAATTGAATTGTTCACAACAAACTGTCGGTTCTGTACTTTTCCTTGTTTTCGTTTTGTATTTACACTATA
TTGCACTATATGTAGAACATTTCTAGTATCCTTTTATTGTATGTACGATAAAATTGCATTGCTCTAAATGTTTTCCTTGCACCTTTAAGTTCGCTTTTGTACATATAACA
ATCTCCTTAGATTGCATTTAACTGCTACTTTCAATGCGAACATACTTGCCACATTAGTGGAAGAAAATTAGGAACGAAATATCTTTTACAAAAGTGACTAGTGTCTTTGA
CAATAAAAAGCATGCCCGCGAATATAACGACCAAAAATTATAACTTTAAAAAAATGTCTTATTACATTCTCATGACTATGTTAATTTAGGAAAAAAAATCATGCCCGCTA
ATATGTTTATAAATCATACTAGAAAATGTTCCAAAGTATTGTGACTTGTTGTTTTAACACATCTTACGTTATTGTTTTTTTCACATTCGAAACATAGGTCTAAAACTAGC
TATTTTTTCGTTTTCAAAATTAACTACCACCGGGTTCATACAAAACTTTATTAGTGCAATTTCGTCGTGATGTGAGTTCAATATTTGTAATTTTTCTTAGTACTAATTTG
AAATTATGATTTTTGCATGAGTAGTATATATTTTTTTAACCATACACATCCATTACAAGTCTTGGCATTCACTGAAATTAGAATTTTAAAAAAAGTTGTTGATATTTTTC
TTATCATCTACATTCATCACAAGTCTTGTCATTTTTCAAATTAGAATTTTAACAAAGCTATAGATATTTTGTTTTTTGTCATCCACATTCACCCTAAAGTCGTTCCAGTT
TTTCAAACTAGAATTTTTTTCAAGAGTTGTACATATGTTTCAAATTCTAATTTGATGTTTACATTTTTGTTTTGAATATGTATATCATCATTCATGTGTGACGCATGCGT
TATAGGTGTAATAGCATTCTAATTAGACACGTACTTAATCATGTTAACAATTGTTACCTTCAAATGGACGCACAAAACCTCACGGCAATCCTAACTGTATTCACAATTTC
CCAACGTCAGTTACTGCTAACGTTGGAGGCACTCATGACAACAATAAGCGCCTAACACTTATACCCTACGATACTAGGCATAGAATTAGGCAACTTGCGTACTTTTGTAT
GATGCATGAGATGGACCTAGTTTGCCACCAAAGTACTCGAATGGACAAGTGGACATTTGCCATTCTATGCCCTTTACTAAGGACTGTTACTGGTCTTTCGTTGAAAAAAT
TGTCGATGTGGAAAAAATGGTTGCAATATTCTTGCACGTCCTTGTCCATTACGTGAAAAAATGAGTTATCCAAAGGGAATTTGTTCGGTTTGATGCGACTGTTTCCCATC
ATTTCAACCTCATCTTGTTGGTTGTGATACGACTACATGACGAGTTGCTAAAGAAACCGTAGCCAGTAACTAACACATGCATCGATCCACAATGGAAGTGCTTCGAGAAT
TACCTTGGGGCATTGGATGGAACGTATATAAAGGTGAACGTGTCGCAAACCGATCGCGCTAGGTACAAAACACGTAAGGGTGAAGTTGCCACTAATGTCCTCAGAGTGTA
CAACTCGAAAGGCGATTTCGATTCATTTTGGCAGGCTGGGAAGGATCTGCAACTGATTCGCACATTCTTCAAGATGCGCTTGTACAGCCAAACAGACTATAAATCCCCAA
GGATATTTACAATTTCTATTCCTCCCACGACATTTAAAACTTCCTATATCACCCCGTATAATCCGTTGTGTAACGTAATAGGGTTTTACTATCTGCACGACATAGGGTAT
CCAAACGCTAATGGAATGATGAGGCAAAGTGCATAATTGCTAAGAAGGATCTATTCGACAACTAGACACATCCTATAGCAAAAGGCCTCCTCAACAAACTATGCCCCTAT
TACGACGAACTAGCCTATGTGTTTAGGAGAGATAGGGCGACGGGTCGAGGTGCAGAGACTTTCGCCGACGTCAAGTCCAATGACTCTAGCGGGTATGAGGGATTTTAACT
GCATGATAGAAACGATATAGAGATCCCCACCATGTACAACCAGGGCTTTAACATGTCCAGGAGGATATACAGACCCCACGACTTGGTTGAGCATTCGATGGTAGGATTGG
ATCAATCAGATCAAAGCAAAAAAGGGGAGGTCAGCGTGTAGAGCATGTTGACCTCATTCATAAGGCGATGAAGTGTGTGAATGACCAACTAAGGGCCATTGTTGAGTGGC
CTTCTGTTGCGCTTCAGAATGAAACCACAGTTCACCAGGAAGTCCTTTGCCAATTGCATGCGATCCCCGAACTAAGTAGGTTGGACAGGGTGCACTACTCGCGAATCCTC
TTTTGCAATTTAGACGACATGAGAGGTTTCCTTGAGATACTTGAGGACGAGAAGATGGACTTCTGCACGGTCCTTCTACGAGAAGACTCTTGAATGTTCTTCTACTTCCA
TTGCCTGACTTCATGTTTTTTTAGTTCGCTCCTTATATGATTTTGACTGTTGTTGCTAATTCTATTAGATGAAATTGTTTTAGTATGTATTCTATTATTTCGTATTAATG
CAATTCTTTTTATCGAAATTCGCATTTACAGGTGTT
Protein sequenceShow/hide protein sequence
MKCVNDQLRAIVEWPSVALQNETTVHQEVLCQLHAIPELSRLDRVHYSRILFCNLDDMRGFLEILEDEKMDFCTVLLREDS