| GenBank top hits | e value | %identity | Alignment |
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| KAA0036198.1 pol protein [Cucumis melo var. makuwa] | 1.1e-65 | 97.69 | Show/hide |
Query: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGH EFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
Subjt: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
Query: IVFIDDILIYSKTEAEHEKHLRVLSGSRGF
IVFIDDILIYSKTEAEHE+HLRVLSG RGF
Subjt: IVFIDDILIYSKTEAEHEKHLRVLSGSRGF
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| KAA0038888.1 gag protease polyprotein [Cucumis melo var. makuwa] | 1.2e-64 | 96.15 | Show/hide |
Query: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
M LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKTAFRSRYGHYEFI+MSFGLTNAPAVFMDLMNRVFREFLDTFV
Subjt: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
Query: IVFIDDILIYSKTEAEHEKHLRVLSGSRGF
IVFIDDILIYSKTEAEHE+HLRVLSG RGF
Subjt: IVFIDDILIYSKTEAEHEKHLRVLSGSRGF
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| KAA0040699.1 pol protein [Cucumis melo var. makuwa] | 2.3e-63 | 97.6 | Show/hide |
Query: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
Subjt: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
Query: IVFIDDILIYSKTEAEHEKHLRVLS
IVFIDDILIYSKTEAEHE+HLR++S
Subjt: IVFIDDILIYSKTEAEHEKHLRVLS
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| KAA0052825.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 1.7e-66 | 97.69 | Show/hide |
Query: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
Subjt: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
Query: IVFIDDILIYSKTEAEHEKHLRVLSGSRGF
IVFIDDI+IYSKTEAEHE+HLRVLSG RGF
Subjt: IVFIDDILIYSKTEAEHEKHLRVLSGSRGF
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| KAA0059062.1 pol protein [Cucumis melo var. makuwa] | 2.3e-63 | 98.39 | Show/hide |
Query: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
Subjt: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
Query: IVFIDDILIYSKTEAEHEKHLRVL
IVFIDDILIYSKTEAEHEKHLR++
Subjt: IVFIDDILIYSKTEAEHEKHLRVL
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7T034 Pol protein | 5.3e-66 | 97.69 | Show/hide |
Query: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGH EFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
Subjt: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
Query: IVFIDDILIYSKTEAEHEKHLRVLSGSRGF
IVFIDDILIYSKTEAEHE+HLRVLSG RGF
Subjt: IVFIDDILIYSKTEAEHEKHLRVLSGSRGF
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| A0A5A7T7P2 Gag protease polyprotein | 5.9e-65 | 96.15 | Show/hide |
Query: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
M LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKTAFRSRYGHYEFI+MSFGLTNAPAVFMDLMNRVFREFLDTFV
Subjt: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
Query: IVFIDDILIYSKTEAEHEKHLRVLSGSRGF
IVFIDDILIYSKTEAEHE+HLRVLSG RGF
Subjt: IVFIDDILIYSKTEAEHEKHLRVLSGSRGF
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| A0A5A7THF3 Reverse transcriptase | 1.1e-63 | 97.6 | Show/hide |
Query: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
Subjt: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
Query: IVFIDDILIYSKTEAEHEKHLRVLS
IVFIDDILIYSKTEAEHE+HLR++S
Subjt: IVFIDDILIYSKTEAEHEKHLRVLS
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| A0A5A7UGF7 Ty3-gypsy retrotransposon protein | 8.2e-67 | 97.69 | Show/hide |
Query: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
Subjt: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
Query: IVFIDDILIYSKTEAEHEKHLRVLSGSRGF
IVFIDDI+IYSKTEAEHE+HLRVLSG RGF
Subjt: IVFIDDILIYSKTEAEHEKHLRVLSGSRGF
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| A0A5A7UT37 Reverse transcriptase | 1.1e-63 | 98.39 | Show/hide |
Query: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
Subjt: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
Query: IVFIDDILIYSKTEAEHEKHLRVL
IVFIDDILIYSKTEAEHEKHLR++
Subjt: IVFIDDILIYSKTEAEHEKHLRVL
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P0CT41 Transposon Tf2-12 polyprotein | 3.6e-27 | 43.44 | Show/hide |
Query: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
+R+ +DY+ LNK N YPLP I+ L ++QG+T+F+K+DL+S YH +R++ D K AFR G +E++VM +G++ APA F +N + E ++ V
Subjt: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
Query: IVFIDDILIYSKTEAEHEKHLR
+ ++DDILI+SK+E+EH KH++
Subjt: IVFIDDILIYSKTEAEHEKHLR
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| P20825 Retrovirus-related Pol polyprotein from transposon 297 | 2.7e-27 | 41.46 | Show/hide |
Query: RLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVI
R+ IDYR+LN++T+ +RYP+P +D++ +L F+ IDL G+HQ+ + +E + KTAF ++ GHYE++ M FGL NAPA F MN + R L+ +
Subjt: RLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVI
Query: VFIDDILIYSKTEAEHEKHLRVL
V++DDI+I+S + EH ++++
Subjt: VFIDDILIYSKTEAEHEKHLRVL
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| P31843 RNA-directed DNA polymerase homolog | 5.9e-38 | 58.78 | Show/hide |
Query: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
+R+CIDYR L KVT+KN+YP+PR+DDLFD+L AT F+K+DLRSGY Q+RI D PKT +RYG +EF VM FGLTNA A F +LMN V E+LD FV
Subjt: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
Query: IVFIDDIL---IYSKTEAEHEKHLRVLSGSR
+V++DD++ IYS + EH KHLRV+ S+
Subjt: IVFIDDIL---IYSKTEAEHEKHLRVLSGSR
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| Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein | 4.2e-28 | 50 | Show/hide |
Query: RLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVI
RLC+DYR LNK T+ + +PLPRID+L ++ A +F+ +DL SGYHQ+ ++ +D KTAF + G YE+ VM FGL NAP+ F M FR+ FV
Subjt: RLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVI
Query: VFIDDILIYSKTEAEHEKHL
V++DDILI+S++ EH KHL
Subjt: VFIDDILIYSKTEAEHEKHL
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| Q99315 Transposon Ty3-G Gag-Pol polyprotein | 4.2e-28 | 50 | Show/hide |
Query: RLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVI
RLC+DYR LNK T+ + +PLPRID+L ++ A +F+ +DL SGYHQ+ ++ +D KTAF + G YE+ VM FGL NAP+ F M FR+ FV
Subjt: RLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVI
Query: VFIDDILIYSKTEAEHEKHL
V++DDILI+S++ EH KHL
Subjt: VFIDDILIYSKTEAEHEKHL
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