; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc08g0225741 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc08g0225741
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionGag/pol protein
Genome locationCMiso1.1chr08:17049384..17050208
RNA-Seq ExpressionCmc08g0225741
SyntenyCmc08g0225741
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008234 - cysteine-type peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADJ18449.1 gag/pol protein, partial [Bryonia dioica]3.1e-12684.35Show/hide
Query:  VLYVDDILLIGNDIGHLTDIKKWLATQFQMKDLGNAQYVLGIQIVRNRKNKTLVMSQTSYIDKMLARYKMQNSKKGLLPYRYEIHLSKEQCPKTPQEVEH
        +LYVDDILLIGND+ +LTD+KKWL TQFQMKDLG AQY+LGIQIVRNRKNKTL MSQ SYIDK+L+RYKMQNSKKG LP+R+ IHLSKEQCPKTPQEVE 
Subjt:  VLYVDDILLIGNDIGHLTDIKKWLATQFQMKDLGNAQYVLGIQIVRNRKNKTLVMSQTSYIDKMLARYKMQNSKKGLLPYRYEIHLSKEQCPKTPQEVEH

Query:  MTNIPYASAVGSLTYAMLCIRPDICYSIGIVSRYQSNPGRDHWTTVKNILKYLRRTKDYKLVYGSKDLILTGYTNFDFQSDKDVRKSTSGSIFTLNGGTV
        M NIPY+SAVGSL YAMLC RPDICYS+GIVSRYQSNPGRDHWT VKNILKYLRRT++Y LVYG+KDLILTGYT+ DFQSDKD RKSTSGS+FTLNGG V
Subjt:  MTNIPYASAVGSLTYAMLCIRPDICYSIGIVSRYQSNPGRDHWTTVKNILKYLRRTKDYKLVYGSKDLILTGYTNFDFQSDKDVRKSTSGSIFTLNGGTV

Query:  VWRSIKQSCIDDFTMEAEYLAACEAAKEAVWLKKFLTYLEIVPNMHLSITLYCDNSGAVANS
        VWRS+KQ+CI D TMEAEY+AACEAAKEAVWL+KFLT LE+VPNMHL ITLYCDNSGAVANS
Subjt:  VWRSIKQSCIDDFTMEAEYLAACEAAKEAVWLKKFLTYLEIVPNMHLSITLYCDNSGAVANS

KAA0043372.1 gag/pol protein [Cucumis melo var. makuwa]5.2e-12686.26Show/hide
Query:  VLYVDDILLIGNDIGHLTDIKKWLATQFQMKDLGNAQYVLGIQIVRNRKNKTLVMSQTSYIDKMLARYKMQNSKKGLLPYRYEIHLSKEQCPKTPQEVEH
        VLYVDDILLIGND+ HLTDIKKWLATQF+MKDLGNAQYV+GIQIV+NRKNKTLVMSQTSYIDKML+RYKMQNSKK LLPYRY IHLSKEQ PKTPQEVE 
Subjt:  VLYVDDILLIGNDIGHLTDIKKWLATQFQMKDLGNAQYVLGIQIVRNRKNKTLVMSQTSYIDKMLARYKMQNSKKGLLPYRYEIHLSKEQCPKTPQEVEH

Query:  MTNIPYASAVGSLTYAMLCIRPDICYSIGIVSRYQSNPGRDHWTTVKNILKYLRRTKDYKLVYGSKDLILTGYTNFDFQSDKDVRKSTSGSIFTLNGGTV
        M+NIPYASAVGSL YAMLC R DICY +GIVSRYQSNPGRDHW  VKNILKYLRRTKDY LVYGSKDLILTGY + DFQSDKD +KS SGS+FTLNGG V
Subjt:  MTNIPYASAVGSLTYAMLCIRPDICYSIGIVSRYQSNPGRDHWTTVKNILKYLRRTKDYKLVYGSKDLILTGYTNFDFQSDKDVRKSTSGSIFTLNGGTV

Query:  VWRSIKQSCIDDFTMEAEYLAACEAAKEAVWLKKFLTYLEIVPNMHLSITLYCDNSGAVANS
        VWRSIKQSCI + TMEAEY+A CEAAKEA+WLKKFLTYLEI PNMHLSITLYCDNSG V NS
Subjt:  VWRSIKQSCIDDFTMEAEYLAACEAAKEAVWLKKFLTYLEIVPNMHLSITLYCDNSGAVANS

KAA0046768.1 gag/pol protein [Cucumis melo var. makuwa]1.1e-12687.02Show/hide
Query:  VLYVDDILLIGNDIGHLTDIKKWLATQFQMKDLGNAQYVLGIQIVRNRKNKTLVMSQTSYIDKMLARYKMQNSKKGLLPYRYEIHLSKEQCPKTPQEVEH
        VLYVDDILLIGN+IGHLTDIK+WLATQFQMK LGNAQYVLGIQIVRN KNKTL MSQTSYIDKML+RYKMQNSKKGLLPYRY I LSKEQCPKTPQEVE 
Subjt:  VLYVDDILLIGNDIGHLTDIKKWLATQFQMKDLGNAQYVLGIQIVRNRKNKTLVMSQTSYIDKMLARYKMQNSKKGLLPYRYEIHLSKEQCPKTPQEVEH

Query:  MTNIPYASAVGSLTYAMLCIRPDICYSIGIVSRYQSNPGRDHWTTVKNILKYLRRTKDYKLVYGSKDLILTGYTNFDFQSDKDVRKSTSGSIFTLNGGTV
        M+NIPYASA+GSL YAMLC RPDICYS+GIVSRYQSNP RDHWT VKNILKY RRTKDY LVYGSKDLILTGYT+ DFQ+DKD RKST GS+FTLNG  V
Subjt:  MTNIPYASAVGSLTYAMLCIRPDICYSIGIVSRYQSNPGRDHWTTVKNILKYLRRTKDYKLVYGSKDLILTGYTNFDFQSDKDVRKSTSGSIFTLNGGTV

Query:  VWRSIKQSCIDDFTMEAEYLAACEAAKEAVWLKKFLTYLEIVPNMHLSITLYCDNSGAVANS
        VWRSIKQSCI D TMEA Y+AACEA+KEAVWLKKFLT LE+VPNMHL ITLYCDNSGAVANS
Subjt:  VWRSIKQSCIDDFTMEAEYLAACEAAKEAVWLKKFLTYLEIVPNMHLSITLYCDNSGAVANS

KAA0067828.1 gag/pol protein [Cucumis melo var. makuwa]4.1e-155100Show/hide
Query:  MNLVFTKGSSNPVLYVDDILLIGNDIGHLTDIKKWLATQFQMKDLGNAQYVLGIQIVRNRKNKTLVMSQTSYIDKMLARYKMQNSKKGLLPYRYEIHLSK
        MNLVFTKGSSNPVLYVDDILLIGNDIGHLTDIKKWLATQFQMKDLGNAQYVLGIQIVRNRKNKTLVMSQTSYIDKMLARYKMQNSKKGLLPYRYEIHLSK
Subjt:  MNLVFTKGSSNPVLYVDDILLIGNDIGHLTDIKKWLATQFQMKDLGNAQYVLGIQIVRNRKNKTLVMSQTSYIDKMLARYKMQNSKKGLLPYRYEIHLSK

Query:  EQCPKTPQEVEHMTNIPYASAVGSLTYAMLCIRPDICYSIGIVSRYQSNPGRDHWTTVKNILKYLRRTKDYKLVYGSKDLILTGYTNFDFQSDKDVRKST
        EQCPKTPQEVEHMTNIPYASAVGSLTYAMLCIRPDICYSIGIVSRYQSNPGRDHWTTVKNILKYLRRTKDYKLVYGSKDLILTGYTNFDFQSDKDVRKST
Subjt:  EQCPKTPQEVEHMTNIPYASAVGSLTYAMLCIRPDICYSIGIVSRYQSNPGRDHWTTVKNILKYLRRTKDYKLVYGSKDLILTGYTNFDFQSDKDVRKST

Query:  SGSIFTLNGGTVVWRSIKQSCIDDFTMEAEYLAACEAAKEAVWLKKFLTYLEIVPNMHLSITLYCDNSGAVANS
        SGSIFTLNGGTVVWRSIKQSCIDDFTMEAEYLAACEAAKEAVWLKKFLTYLEIVPNMHLSITLYCDNSGAVANS
Subjt:  SGSIFTLNGGTVVWRSIKQSCIDDFTMEAEYLAACEAAKEAVWLKKFLTYLEIVPNMHLSITLYCDNSGAVANS

TYK03644.1 gag/pol protein [Cucumis melo var. makuwa]4.3e-12886.64Show/hide
Query:  VLYVDDILLIGNDIGHLTDIKKWLATQFQMKDLGNAQYVLGIQIVRNRKNKTLVMSQTSYIDKMLARYKMQNSKKGLLPYRYEIHLSKEQCPKTPQEVEH
        VLYVDDILLIGND+GHL DIKKWLA QFQMKDLGNAQYVLG+QIVRNRKNKTL MSQTSYIDKML+RYKM NSKKGLLPYRY IHLSKEQCPKTPQEVE 
Subjt:  VLYVDDILLIGNDIGHLTDIKKWLATQFQMKDLGNAQYVLGIQIVRNRKNKTLVMSQTSYIDKMLARYKMQNSKKGLLPYRYEIHLSKEQCPKTPQEVEH

Query:  MTNIPYASAVGSLTYAMLCIRPDICYSIGIVSRYQSNPGRDHWTTVKNILKYLRRTKDYKLVYGSKDLILTGYTNFDFQSDKDVRKSTSGSIFTLNGGTV
        M+NIPYASAVGSL Y MLC RP+ICYS+GIVSR QS PGRDHWTTVKNILKYLRRTKDY LVYGSKDLILTGYT+F FQ+DKD RKSTSG +FT+NGG V
Subjt:  MTNIPYASAVGSLTYAMLCIRPDICYSIGIVSRYQSNPGRDHWTTVKNILKYLRRTKDYKLVYGSKDLILTGYTNFDFQSDKDVRKSTSGSIFTLNGGTV

Query:  VWRSIKQSCIDDFTMEAEYLAACEAAKEAVWLKKFLTYLEIVPNMHLSITLYCDNSGAVANS
        VWRSIKQSCI D TMEAEY+A CEAAKEAVWLKKFLT LE+VPNMHL  TLYCDNSGAV NS
Subjt:  VWRSIKQSCIDDFTMEAEYLAACEAAKEAVWLKKFLTYLEIVPNMHLSITLYCDNSGAVANS

TrEMBL top hitse value%identityAlignment
A0A5A7TJA8 Gag/pol protein2.5e-12686.26Show/hide
Query:  VLYVDDILLIGNDIGHLTDIKKWLATQFQMKDLGNAQYVLGIQIVRNRKNKTLVMSQTSYIDKMLARYKMQNSKKGLLPYRYEIHLSKEQCPKTPQEVEH
        VLYVDDILLIGND+ HLTDIKKWLATQF+MKDLGNAQYV+GIQIV+NRKNKTLVMSQTSYIDKML+RYKMQNSKK LLPYRY IHLSKEQ PKTPQEVE 
Subjt:  VLYVDDILLIGNDIGHLTDIKKWLATQFQMKDLGNAQYVLGIQIVRNRKNKTLVMSQTSYIDKMLARYKMQNSKKGLLPYRYEIHLSKEQCPKTPQEVEH

Query:  MTNIPYASAVGSLTYAMLCIRPDICYSIGIVSRYQSNPGRDHWTTVKNILKYLRRTKDYKLVYGSKDLILTGYTNFDFQSDKDVRKSTSGSIFTLNGGTV
        M+NIPYASAVGSL YAMLC R DICY +GIVSRYQSNPGRDHW  VKNILKYLRRTKDY LVYGSKDLILTGY + DFQSDKD +KS SGS+FTLNGG V
Subjt:  MTNIPYASAVGSLTYAMLCIRPDICYSIGIVSRYQSNPGRDHWTTVKNILKYLRRTKDYKLVYGSKDLILTGYTNFDFQSDKDVRKSTSGSIFTLNGGTV

Query:  VWRSIKQSCIDDFTMEAEYLAACEAAKEAVWLKKFLTYLEIVPNMHLSITLYCDNSGAVANS
        VWRSIKQSCI + TMEAEY+A CEAAKEA+WLKKFLTYLEI PNMHLSITLYCDNSG V NS
Subjt:  VWRSIKQSCIDDFTMEAEYLAACEAAKEAVWLKKFLTYLEIVPNMHLSITLYCDNSGAVANS

A0A5A7TV73 Gag/pol protein5.1e-12787.02Show/hide
Query:  VLYVDDILLIGNDIGHLTDIKKWLATQFQMKDLGNAQYVLGIQIVRNRKNKTLVMSQTSYIDKMLARYKMQNSKKGLLPYRYEIHLSKEQCPKTPQEVEH
        VLYVDDILLIGN+IGHLTDIK+WLATQFQMK LGNAQYVLGIQIVRN KNKTL MSQTSYIDKML+RYKMQNSKKGLLPYRY I LSKEQCPKTPQEVE 
Subjt:  VLYVDDILLIGNDIGHLTDIKKWLATQFQMKDLGNAQYVLGIQIVRNRKNKTLVMSQTSYIDKMLARYKMQNSKKGLLPYRYEIHLSKEQCPKTPQEVEH

Query:  MTNIPYASAVGSLTYAMLCIRPDICYSIGIVSRYQSNPGRDHWTTVKNILKYLRRTKDYKLVYGSKDLILTGYTNFDFQSDKDVRKSTSGSIFTLNGGTV
        M+NIPYASA+GSL YAMLC RPDICYS+GIVSRYQSNP RDHWT VKNILKY RRTKDY LVYGSKDLILTGYT+ DFQ+DKD RKST GS+FTLNG  V
Subjt:  MTNIPYASAVGSLTYAMLCIRPDICYSIGIVSRYQSNPGRDHWTTVKNILKYLRRTKDYKLVYGSKDLILTGYTNFDFQSDKDVRKSTSGSIFTLNGGTV

Query:  VWRSIKQSCIDDFTMEAEYLAACEAAKEAVWLKKFLTYLEIVPNMHLSITLYCDNSGAVANS
        VWRSIKQSCI D TMEA Y+AACEA+KEAVWLKKFLT LE+VPNMHL ITLYCDNSGAVANS
Subjt:  VWRSIKQSCIDDFTMEAEYLAACEAAKEAVWLKKFLTYLEIVPNMHLSITLYCDNSGAVANS

A0A5A7VJ67 Gag/pol protein2.0e-155100Show/hide
Query:  MNLVFTKGSSNPVLYVDDILLIGNDIGHLTDIKKWLATQFQMKDLGNAQYVLGIQIVRNRKNKTLVMSQTSYIDKMLARYKMQNSKKGLLPYRYEIHLSK
        MNLVFTKGSSNPVLYVDDILLIGNDIGHLTDIKKWLATQFQMKDLGNAQYVLGIQIVRNRKNKTLVMSQTSYIDKMLARYKMQNSKKGLLPYRYEIHLSK
Subjt:  MNLVFTKGSSNPVLYVDDILLIGNDIGHLTDIKKWLATQFQMKDLGNAQYVLGIQIVRNRKNKTLVMSQTSYIDKMLARYKMQNSKKGLLPYRYEIHLSK

Query:  EQCPKTPQEVEHMTNIPYASAVGSLTYAMLCIRPDICYSIGIVSRYQSNPGRDHWTTVKNILKYLRRTKDYKLVYGSKDLILTGYTNFDFQSDKDVRKST
        EQCPKTPQEVEHMTNIPYASAVGSLTYAMLCIRPDICYSIGIVSRYQSNPGRDHWTTVKNILKYLRRTKDYKLVYGSKDLILTGYTNFDFQSDKDVRKST
Subjt:  EQCPKTPQEVEHMTNIPYASAVGSLTYAMLCIRPDICYSIGIVSRYQSNPGRDHWTTVKNILKYLRRTKDYKLVYGSKDLILTGYTNFDFQSDKDVRKST

Query:  SGSIFTLNGGTVVWRSIKQSCIDDFTMEAEYLAACEAAKEAVWLKKFLTYLEIVPNMHLSITLYCDNSGAVANS
        SGSIFTLNGGTVVWRSIKQSCIDDFTMEAEYLAACEAAKEAVWLKKFLTYLEIVPNMHLSITLYCDNSGAVANS
Subjt:  SGSIFTLNGGTVVWRSIKQSCIDDFTMEAEYLAACEAAKEAVWLKKFLTYLEIVPNMHLSITLYCDNSGAVANS

A0A5D3BX45 Gag/pol protein2.1e-12886.64Show/hide
Query:  VLYVDDILLIGNDIGHLTDIKKWLATQFQMKDLGNAQYVLGIQIVRNRKNKTLVMSQTSYIDKMLARYKMQNSKKGLLPYRYEIHLSKEQCPKTPQEVEH
        VLYVDDILLIGND+GHL DIKKWLA QFQMKDLGNAQYVLG+QIVRNRKNKTL MSQTSYIDKML+RYKM NSKKGLLPYRY IHLSKEQCPKTPQEVE 
Subjt:  VLYVDDILLIGNDIGHLTDIKKWLATQFQMKDLGNAQYVLGIQIVRNRKNKTLVMSQTSYIDKMLARYKMQNSKKGLLPYRYEIHLSKEQCPKTPQEVEH

Query:  MTNIPYASAVGSLTYAMLCIRPDICYSIGIVSRYQSNPGRDHWTTVKNILKYLRRTKDYKLVYGSKDLILTGYTNFDFQSDKDVRKSTSGSIFTLNGGTV
        M+NIPYASAVGSL Y MLC RP+ICYS+GIVSR QS PGRDHWTTVKNILKYLRRTKDY LVYGSKDLILTGYT+F FQ+DKD RKSTSG +FT+NGG V
Subjt:  MTNIPYASAVGSLTYAMLCIRPDICYSIGIVSRYQSNPGRDHWTTVKNILKYLRRTKDYKLVYGSKDLILTGYTNFDFQSDKDVRKSTSGSIFTLNGGTV

Query:  VWRSIKQSCIDDFTMEAEYLAACEAAKEAVWLKKFLTYLEIVPNMHLSITLYCDNSGAVANS
        VWRSIKQSCI D TMEAEY+A CEAAKEAVWLKKFLT LE+VPNMHL  TLYCDNSGAV NS
Subjt:  VWRSIKQSCIDDFTMEAEYLAACEAAKEAVWLKKFLTYLEIVPNMHLSITLYCDNSGAVANS

E2GK51 Gag/pol protein (Fragment)1.5e-12684.35Show/hide
Query:  VLYVDDILLIGNDIGHLTDIKKWLATQFQMKDLGNAQYVLGIQIVRNRKNKTLVMSQTSYIDKMLARYKMQNSKKGLLPYRYEIHLSKEQCPKTPQEVEH
        +LYVDDILLIGND+ +LTD+KKWL TQFQMKDLG AQY+LGIQIVRNRKNKTL MSQ SYIDK+L+RYKMQNSKKG LP+R+ IHLSKEQCPKTPQEVE 
Subjt:  VLYVDDILLIGNDIGHLTDIKKWLATQFQMKDLGNAQYVLGIQIVRNRKNKTLVMSQTSYIDKMLARYKMQNSKKGLLPYRYEIHLSKEQCPKTPQEVEH

Query:  MTNIPYASAVGSLTYAMLCIRPDICYSIGIVSRYQSNPGRDHWTTVKNILKYLRRTKDYKLVYGSKDLILTGYTNFDFQSDKDVRKSTSGSIFTLNGGTV
        M NIPY+SAVGSL YAMLC RPDICYS+GIVSRYQSNPGRDHWT VKNILKYLRRT++Y LVYG+KDLILTGYT+ DFQSDKD RKSTSGS+FTLNGG V
Subjt:  MTNIPYASAVGSLTYAMLCIRPDICYSIGIVSRYQSNPGRDHWTTVKNILKYLRRTKDYKLVYGSKDLILTGYTNFDFQSDKDVRKSTSGSIFTLNGGTV

Query:  VWRSIKQSCIDDFTMEAEYLAACEAAKEAVWLKKFLTYLEIVPNMHLSITLYCDNSGAVANS
        VWRS+KQ+CI D TMEAEY+AACEAAKEAVWL+KFLT LE+VPNMHL ITLYCDNSGAVANS
Subjt:  VWRSIKQSCIDDFTMEAEYLAACEAAKEAVWLKKFLTYLEIVPNMHLSITLYCDNSGAVANS

SwissProt top hitse value%identityAlignment
P04146 Copia protein2.0e-3531.91Show/hide
Query:  VFTKGSSNP----VLYVDDILLIGNDIGHLTDIKKWLATQFQMKDLGNAQYVLGIQIVRNRKNKTLVMSQTSYIDKMLARYKMQNSKKGLLP----YRYE
        +  KG+ N     +LYVDD+++   D+  + + K++L  +F+M DL   ++ +GI+I    +   + +SQ++Y+ K+L+++ M+N      P      YE
Subjt:  VFTKGSSNP----VLYVDDILLIGNDIGHLTDIKKWLATQFQMKDLGNAQYVLGIQIVRNRKNKTLVMSQTSYIDKMLARYKMQNSKKGLLP----YRYE

Query:  IHLSKEQCPKTPQEVEHMTNIPYASAVGSLTYAMLCIRPDICYSIGIVSRYQSNPGRDHWTTVKNILKYLRRTKDYKLVYGSKDLI----LTGYTNFDFQ
        +  S E C           N P  S +G L Y MLC RPD+  ++ I+SRY S    + W  +K +L+YL+ T D KL++  K+L     + GY + D+ 
Subjt:  IHLSKEQCPKTPQEVEHMTNIPYASAVGSLTYAMLCIRPDICYSIGIVSRYQSNPGRDHWTTVKNILKYLRRTKDYKLVYGSKDLI----LTGYTNFDFQ

Query:  SDKDVRKSTSGSIFTL-NGGTVVWRSIKQSCIDDFTMEAEYLAACEAAKEAVWLKKFLTYLEIVPNMHLSITLYCDNSGAVA
          +  RKST+G +F + +   + W + +Q+ +   + EAEY+A  EA +EA+WLK  LT + I   +   I +Y DN G ++
Subjt:  SDKDVRKSTSGSIFTL-NGGTVVWRSIKQSCIDDFTMEAEYLAACEAAKEAVWLKKFLTYLEIVPNMHLSITLYCDNSGAVA

P0CV72 Secreted RxLR effector protein 1612.9e-2643.61Show/hide
Query:  MTNIPYASAVGSLTYAMLCIRPDICYSIGIVSRYQSNPGRDHWTTVKNILKYLRRTKDYKLVYGSKDLI-LTGYTNFDFQSDKDVRKSTSGSIFTLNGGT
        M N+PY SAVG++ Y M+  RPD+  ++G++S++ S+P   HW  +K +L+YL+ T+ Y L +       L GY++ D+  D + R+STSG +F LNGG 
Subjt:  MTNIPYASAVGSLTYAMLCIRPDICYSIGIVSRYQSNPGRDHWTTVKNILKYLRRTKDYKLVYGSKDLI-LTGYTNFDFQSDKDVRKSTSGSIFTLNGGT

Query:  VVWRSIKQSCIDDFTMEAEYLAACEAAKEAVWL
        V WRS KQ  +   + E EY+A  EA +EAVWL
Subjt:  VVWRSIKQSCIDDFTMEAEYLAACEAAKEAVWL

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-942.2e-6346.33Show/hide
Query:  VLYVDDILLIGNDIGHLTDIKKWLATQFQMKDLGNAQYVLGIQIVRNRKNKTLVMSQTSYIDKMLARYKMQNSKKGLLPYRYEIHLSKEQCPKTPQEVEH
        +LYVDD+L++G D G +  +K  L+  F MKDLG AQ +LG++IVR R ++ L +SQ  YI+++L R+ M+N+K    P    + LSK+ CP T +E  +
Subjt:  VLYVDDILLIGNDIGHLTDIKKWLATQFQMKDLGNAQYVLGIQIVRNRKNKTLVMSQTSYIDKMLARYKMQNSKKGLLPYRYEIHLSKEQCPKTPQEVEH

Query:  MTNIPYASAVGSLTYAMLCIRPDICYSIGIVSRYQSNPGRDHWTTVKNILKYLRRTKDYKLVYGSKDLILTGYTNFDFQSDKDVRKSTSGSIFTLNGGTV
        M  +PY+SAVGSL YAM+C RPDI +++G+VSR+  NPG++HW  VK IL+YLR T    L +G  D IL GYT+ D   D D RKS++G +FT +GG +
Subjt:  MTNIPYASAVGSLTYAMLCIRPDICYSIGIVSRYQSNPGRDHWTTVKNILKYLRRTKDYKLVYGSKDLILTGYTNFDFQSDKDVRKSTSGSIFTLNGGTV

Query:  VWRSIKQSCIDDFTMEAEYLAACEAAKEAVWLKKFLTYLEIVPNMHLSITLYCDNSGAV
         W+S  Q C+   T EAEY+AA E  KE +WLK+FL  L +    ++   +YCD+  A+
Subjt:  VWRSIKQSCIDDFTMEAEYLAACEAAKEAVWLKKFLTYLEIVPNMHLSITLYCDNSGAV

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE11.3e-2333.2Show/hide
Query:  VLYVDDILLIGNDIGHLTDIKKWLATQFQMKDLGNAQYVLGIQIVRNRKNKTLVMSQTSYIDKMLARYKMQNSKKGLLPYRYEIHLSKEQCPKTPQEVEH
        ++YVDDIL+ GND   L +    L+ +F +KD     Y LGI+    R    L +SQ  YI  +LAR  M  +K    P      LS     K     E 
Subjt:  VLYVDDILLIGNDIGHLTDIKKWLATQFQMKDLGNAQYVLGIQIVRNRKNKTLVMSQTSYIDKMLARYKMQNSKKGLLPYRYEIHLSKEQCPKTPQEVEH

Query:  MTNIPYASAVGSLTYAMLCIRPDICYSIGIVSRYQSNPGRDHWTTVKNILKYLRRTKDYKL-VYGSKDLILTGYTNFDFQSDKDVRKSTSGSIFTLNGGT
             Y   VGSL Y +   RPDI Y++  +S++   P  +H   +K IL+YL  T ++ + +     L L  Y++ D+  DKD   ST+G I  L    
Subjt:  MTNIPYASAVGSLTYAMLCIRPDICYSIGIVSRYQSNPGRDHWTTVKNILKYLRRTKDYKL-VYGSKDLILTGYTNFDFQSDKDVRKSTSGSIFTLNGGT

Query:  VVWRSIKQSCIDDFTMEAEYLAACEAAKEAVWLKKFLTYLEIVPNMHLSITLYCDNSGA
        + W S KQ  +   + EAEY +    + E  W+   LT L I   +     +YCDN GA
Subjt:  VVWRSIKQSCIDDFTMEAEYLAACEAAKEAVWLKKFLTYLEIVPNMHLSITLYCDNSGA

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE26.4e-2632.82Show/hide
Query:  VLYVDDILLIGNDIGHLTDIKKWLATQFQMKDLGNAQYVLGIQIVRNRKNKTLVMSQTSYIDKMLARYKMQNSKKGLLPYRYEIHLSKEQCPKTPQEVEH
        ++YVDDIL+ GND   L      L+ +F +K+  +  Y LGI+    R  + L +SQ  Y   +LAR  M  +K    P      L+     K P   E 
Subjt:  VLYVDDILLIGNDIGHLTDIKKWLATQFQMKDLGNAQYVLGIQIVRNRKNKTLVMSQTSYIDKMLARYKMQNSKKGLLPYRYEIHLSKEQCPKTPQEVEH

Query:  MTNIPYASAVGSLTYAMLCIRPDICYSIGIVSRYQSNPGRDHWTTVKNILKYLRRTKDYKL-VYGSKDLILTGYTNFDFQSDKDVRKSTSGSIFTLNGGT
             Y   VGSL Y +   RPD+ Y++  +S+Y   P  DHW  +K +L+YL  T D+ + +     L L  Y++ D+  D D   ST+G I  L    
Subjt:  MTNIPYASAVGSLTYAMLCIRPDICYSIGIVSRYQSNPGRDHWTTVKNILKYLRRTKDYKL-VYGSKDLILTGYTNFDFQSDKDVRKSTSGSIFTLNGGT

Query:  VVWRSIKQSCIDDFTMEAEYLAACEAAKEAVWLKKFLTYLEIVPNMHLSITLYCDNSGA
        + W S KQ  +   + EAEY +    + E  W+   LT L I   +     +YCDN GA
Subjt:  VVWRSIKQSCIDDFTMEAEYLAACEAAKEAVWLKKFLTYLEIVPNMHLSITLYCDNSGA

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 84.0e-2327.69Show/hide
Query:  VLYVDDILLIGNDIGHLTDIKKWLATQFQMKDLGNAQYVLGIQIVRNRKNKTLVMSQTSYIDKMLARYKMQNSKKGLLPYRYEIHLSKEQCPKTPQEVEH
        ++YVDDI++  N+   + ++K  L + F+++DLG  +Y LG++I R+     + + Q  Y   +L    +   K   +P    +  S           + 
Subjt:  VLYVDDILLIGNDIGHLTDIKKWLATQFQMKDLGNAQYVLGIQIVRNRKNKTLVMSQTSYIDKMLARYKMQNSKKGLLPYRYEIHLSKEQCPKTPQEVEH

Query:  MTNIPYASAVGSLTYAMLCIRPDICYSIGIVSRYQSNPGRDHWTTVKNILKYLRRTKDYKLVYGSK-DLILTGYTNFDFQSDKDVRKSTSGSIFTLNGGT
        +    Y   +G L Y  +  R DI +++  +S++   P   H   V  IL Y++ T    L Y S+ ++ L  +++  FQS KD R+ST+G    L    
Subjt:  MTNIPYASAVGSLTYAMLCIRPDICYSIGIVSRYQSNPGRDHWTTVKNILKYLRRTKDYKLVYGSK-DLILTGYTNFDFQSDKDVRKSTSGSIFTLNGGT

Query:  VVWRSIKQSCIDDFTMEAEYLAACEAAKEAVWLKKFLTYLEIVPNMHLSITLYCDNSGAV
        + W+S KQ  +   + EAEY A   A  E +WL +F   L++   +     L+CDN+ A+
Subjt:  VVWRSIKQSCIDDFTMEAEYLAACEAAKEAVWLKKFLTYLEIVPNMHLSITLYCDNSGAV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACCTTGTGTTTACAAAAGGATCATCAAATCCAGTTTTGTATGTAGATGACATTCTACTGATTGGAAATGATATAGGTCATCTAACTGATATTAAGAAATGGCTAGC
TACGCAATTCCAAATGAAAGATTTGGGAAATGCTCAATACGTTCTTGGTATCCAAATAGTTCGAAACCGAAAGAACAAAACACTAGTCATGTCTCAAACATCTTATATAG
ACAAAATGTTGGCAAGATATAAGATGCAGAATTCCAAGAAAGGTTTGTTGCCGTACAGATATGAAATTCATTTATCAAAAGAACAATGTCCAAAAACACCTCAAGAAGTT
GAGCATATGACTAACATTCCCTATGCTTCTGCTGTTGGGAGCCTGACGTATGCAATGTTATGTATTAGACCTGACATTTGCTATTCAATAGGGATAGTTAGTAGATATCA
GTCCAATCCTGGACGTGATCATTGGACAACTGTTAAGAATATTCTAAAATATCTTAGAAGAACAAAAGACTACAAGCTTGTGTATGGTTCTAAGGATCTGATCCTTACTG
GATACACTAACTTTGATTTTCAATCTGATAAAGATGTTAGAAAGTCTACATCGGGATCAATTTTCACTCTGAATGGAGGAACAGTAGTATGGAGAAGCATAAAACAATCC
TGTATTGATGACTTCACTATGGAAGCTGAATATTTAGCAGCCTGTGAAGCAGCAAAGGAAGCAGTATGGCTTAAAAAGTTCTTAACATATTTAGAAATTGTTCCAAATAT
GCATCTGTCAATCACCTTATACTGCGACAACAGTGGTGCAGTTGCAAATTCATGA
mRNA sequenceShow/hide mRNA sequence
ATGAACCTTGTGTTTACAAAAGGATCATCAAATCCAGTTTTGTATGTAGATGACATTCTACTGATTGGAAATGATATAGGTCATCTAACTGATATTAAGAAATGGCTAGC
TACGCAATTCCAAATGAAAGATTTGGGAAATGCTCAATACGTTCTTGGTATCCAAATAGTTCGAAACCGAAAGAACAAAACACTAGTCATGTCTCAAACATCTTATATAG
ACAAAATGTTGGCAAGATATAAGATGCAGAATTCCAAGAAAGGTTTGTTGCCGTACAGATATGAAATTCATTTATCAAAAGAACAATGTCCAAAAACACCTCAAGAAGTT
GAGCATATGACTAACATTCCCTATGCTTCTGCTGTTGGGAGCCTGACGTATGCAATGTTATGTATTAGACCTGACATTTGCTATTCAATAGGGATAGTTAGTAGATATCA
GTCCAATCCTGGACGTGATCATTGGACAACTGTTAAGAATATTCTAAAATATCTTAGAAGAACAAAAGACTACAAGCTTGTGTATGGTTCTAAGGATCTGATCCTTACTG
GATACACTAACTTTGATTTTCAATCTGATAAAGATGTTAGAAAGTCTACATCGGGATCAATTTTCACTCTGAATGGAGGAACAGTAGTATGGAGAAGCATAAAACAATCC
TGTATTGATGACTTCACTATGGAAGCTGAATATTTAGCAGCCTGTGAAGCAGCAAAGGAAGCAGTATGGCTTAAAAAGTTCTTAACATATTTAGAAATTGTTCCAAATAT
GCATCTGTCAATCACCTTATACTGCGACAACAGTGGTGCAGTTGCAAATTCATGA
Protein sequenceShow/hide protein sequence
MNLVFTKGSSNPVLYVDDILLIGNDIGHLTDIKKWLATQFQMKDLGNAQYVLGIQIVRNRKNKTLVMSQTSYIDKMLARYKMQNSKKGLLPYRYEIHLSKEQCPKTPQEV
EHMTNIPYASAVGSLTYAMLCIRPDICYSIGIVSRYQSNPGRDHWTTVKNILKYLRRTKDYKLVYGSKDLILTGYTNFDFQSDKDVRKSTSGSIFTLNGGTVVWRSIKQS
CIDDFTMEAEYLAACEAAKEAVWLKKFLTYLEIVPNMHLSITLYCDNSGAVANS