; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc08g0225761 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc08g0225761
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase
Genome locationCMiso1.1chr08:17099622..17100320
RNA-Seq ExpressionCmc08g0225761
SyntenyCmc08g0225761
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR043128 - Reverse transcriptase/Diguanylate cyclase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036676.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]6.4e-10986.64Show/hide
Query:  MLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLRRIDDLFDQLNGATLFSKIELRSGYHQLKVRESDIPTTTFKTRYGHYVFRVMSFSLTNVPAVFMDLMNR
        +LFVKKKDGTLRLCIDYRQLNKVTIRNKYPL RIDDLFDQL GATLFSKI+LRSGYHQLKVRESDI  T F+TRYGHY FRVM F LTN PAVFMDLMNR
Subjt:  MLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLRRIDDLFDQLNGATLFSKIELRSGYHQLKVRESDIPTTTFKTRYGHYVFRVMSFSLTNVPAVFMDLMNR

Query:  IFHQYLDQFVIMFIDDILVYSVDKEAHEEHLRIVLQTLRDKLLYTKFSKCEFWLEQVVFLGHVLLAKGVSVDQQKGEAVVNWERSTSATEVLSFLGLARY
        IFH+YLDQFVI+FIDDILVYSVD+E+HEEHLRIVLQTLR+K LY KFSKCEFWLEQVVFLGHV+ AKGVSVD QK EAVVNWER  SATEV SFLGLA Y
Subjt:  IFHQYLDQFVIMFIDDILVYSVDKEAHEEHLRIVLQTLRDKLLYTKFSKCEFWLEQVVFLGHVLLAKGVSVDQQKGEAVVNWERSTSATEVLSFLGLARY

Query:  YRHFIEDFSRLALLLTTLTRKNAKFEWSDKCE
        YR FIEDFSRLAL LT LTRKN KFEWSDKCE
Subjt:  YRHFIEDFSRLALLLTTLTRKNAKFEWSDKCE

KAA0050527.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]6.4e-10986.64Show/hide
Query:  MLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLRRIDDLFDQLNGATLFSKIELRSGYHQLKVRESDIPTTTFKTRYGHYVFRVMSFSLTNVPAVFMDLMNR
        +LFVKKKDGTLRLCIDYRQLNKVTIRNKYPL RIDDLFDQL GATLFSKI+LRSGYHQLKVRESDI  T F+TRYGHY FRVM F LTN PAVFMDLMNR
Subjt:  MLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLRRIDDLFDQLNGATLFSKIELRSGYHQLKVRESDIPTTTFKTRYGHYVFRVMSFSLTNVPAVFMDLMNR

Query:  IFHQYLDQFVIMFIDDILVYSVDKEAHEEHLRIVLQTLRDKLLYTKFSKCEFWLEQVVFLGHVLLAKGVSVDQQKGEAVVNWERSTSATEVLSFLGLARY
        IFH+YLDQFVI+FIDDILVYSVD+E+HEEHLRIVLQTLR+K LY KFSKCEFWLEQVVFLGHV+ AKGVSVD QK EAVVNWER  SATEV SFLGLA Y
Subjt:  IFHQYLDQFVIMFIDDILVYSVDKEAHEEHLRIVLQTLRDKLLYTKFSKCEFWLEQVVFLGHVLLAKGVSVDQQKGEAVVNWERSTSATEVLSFLGLARY

Query:  YRHFIEDFSRLALLLTTLTRKNAKFEWSDKCE
        YR FIEDFSRLAL LT LTRKN KFEWSDKCE
Subjt:  YRHFIEDFSRLALLLTTLTRKNAKFEWSDKCE

KAA0053222.1 hypothetical protein E6C27_scaffold102G00060 [Cucumis melo var. makuwa]6.4e-10987.45Show/hide
Query:  LFVKKKDGTLRLCIDYRQLNKVTIRNKYPLRRIDDLFDQLNGATLFSKIELRSGYHQLKVRESDIPTTTFKTRYGHYVFRVMSFSLTNVPAVFMDLMNRI
        LFVKKKD TLRLC+DYRQLNKVTIRNKYPL RIDDLFDQL GA LFSKI+LRSGYHQLKVRESDI    F+TRYGHY FRVMSF LTN PAVFMDLMNRI
Subjt:  LFVKKKDGTLRLCIDYRQLNKVTIRNKYPLRRIDDLFDQLNGATLFSKIELRSGYHQLKVRESDIPTTTFKTRYGHYVFRVMSFSLTNVPAVFMDLMNRI

Query:  FHQYLDQFVIMFIDDILVYSVDKEAHEEHLRIVLQTLRDKLLYTKFSKCEFWLEQVVFLGHVLLAKGVSVDQQKGEAVVNWERSTSATEVLSFLGLARYY
        FHQYLDQFVI+FIDDILVYSVD+E+HEEHLRIVLQTLRDK LY KFSKCEFWLEQVVFLGHV+ AKGVSVD QK EAVVNWER TSATEV SFLGLA YY
Subjt:  FHQYLDQFVIMFIDDILVYSVDKEAHEEHLRIVLQTLRDKLLYTKFSKCEFWLEQVVFLGHVLLAKGVSVDQQKGEAVVNWERSTSATEVLSFLGLARYY

Query:  RHFIEDFSRLALLLTTLTRKNAKFEWSDKCE
        R FIEDFSRLAL LT LTRKNAKFEWSDKCE
Subjt:  RHFIEDFSRLALLLTTLTRKNAKFEWSDKCE

KAA0062270.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]6.4e-10986.64Show/hide
Query:  MLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLRRIDDLFDQLNGATLFSKIELRSGYHQLKVRESDIPTTTFKTRYGHYVFRVMSFSLTNVPAVFMDLMNR
        +LFVKKKDGTLRLCIDYRQLNKVTIRNKYPL RIDDLFDQL GATLFSKI+LRSGYHQLKVRESDI  T F+TRYGHY FRVM F LTN PAVFMDLMNR
Subjt:  MLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLRRIDDLFDQLNGATLFSKIELRSGYHQLKVRESDIPTTTFKTRYGHYVFRVMSFSLTNVPAVFMDLMNR

Query:  IFHQYLDQFVIMFIDDILVYSVDKEAHEEHLRIVLQTLRDKLLYTKFSKCEFWLEQVVFLGHVLLAKGVSVDQQKGEAVVNWERSTSATEVLSFLGLARY
        IFH+YLDQFVI+FIDDILVYSVD+E+HEEHLRIVLQTLR+K LY KFSKCEFWLEQVVFLGHV+ AKGVSVD QK EAVVNWER  SATEV SFLGLA Y
Subjt:  IFHQYLDQFVIMFIDDILVYSVDKEAHEEHLRIVLQTLRDKLLYTKFSKCEFWLEQVVFLGHVLLAKGVSVDQQKGEAVVNWERSTSATEVLSFLGLARY

Query:  YRHFIEDFSRLALLLTTLTRKNAKFEWSDKCE
        YR FIEDFSRLAL LT LTRKN KFEWSDKCE
Subjt:  YRHFIEDFSRLALLLTTLTRKNAKFEWSDKCE

KAA0066849.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]6.4e-10986.64Show/hide
Query:  MLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLRRIDDLFDQLNGATLFSKIELRSGYHQLKVRESDIPTTTFKTRYGHYVFRVMSFSLTNVPAVFMDLMNR
        +LFVKKKDGTLRLCIDYRQLNKVTIRNKYPL RIDDLFDQL GATLFSKI+LRSGYHQLKVRESDI  T F+TRYGHY FRVM F LTN PAVFMDLMNR
Subjt:  MLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLRRIDDLFDQLNGATLFSKIELRSGYHQLKVRESDIPTTTFKTRYGHYVFRVMSFSLTNVPAVFMDLMNR

Query:  IFHQYLDQFVIMFIDDILVYSVDKEAHEEHLRIVLQTLRDKLLYTKFSKCEFWLEQVVFLGHVLLAKGVSVDQQKGEAVVNWERSTSATEVLSFLGLARY
        IFH+YLDQFVI+FIDDILVYSVD+E+HEEHLRIVLQTLR+K LY KFSKCEFWLEQVVFLGHV+ AKGVSVD QK EAVVNWER  SATEV SFLGLA Y
Subjt:  IFHQYLDQFVIMFIDDILVYSVDKEAHEEHLRIVLQTLRDKLLYTKFSKCEFWLEQVVFLGHVLLAKGVSVDQQKGEAVVNWERSTSATEVLSFLGLARY

Query:  YRHFIEDFSRLALLLTTLTRKNAKFEWSDKCE
        YR FIEDFSRLAL LT LTRKN KFEWSDKCE
Subjt:  YRHFIEDFSRLALLLTTLTRKNAKFEWSDKCE

TrEMBL top hitse value%identityAlignment
A0A5A7T3K4 Reverse transcriptase3.1e-10986.64Show/hide
Query:  MLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLRRIDDLFDQLNGATLFSKIELRSGYHQLKVRESDIPTTTFKTRYGHYVFRVMSFSLTNVPAVFMDLMNR
        +LFVKKKDGTLRLCIDYRQLNKVTIRNKYPL RIDDLFDQL GATLFSKI+LRSGYHQLKVRESDI  T F+TRYGHY FRVM F LTN PAVFMDLMNR
Subjt:  MLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLRRIDDLFDQLNGATLFSKIELRSGYHQLKVRESDIPTTTFKTRYGHYVFRVMSFSLTNVPAVFMDLMNR

Query:  IFHQYLDQFVIMFIDDILVYSVDKEAHEEHLRIVLQTLRDKLLYTKFSKCEFWLEQVVFLGHVLLAKGVSVDQQKGEAVVNWERSTSATEVLSFLGLARY
        IFH+YLDQFVI+FIDDILVYSVD+E+HEEHLRIVLQTLR+K LY KFSKCEFWLEQVVFLGHV+ AKGVSVD QK EAVVNWER  SATEV SFLGLA Y
Subjt:  IFHQYLDQFVIMFIDDILVYSVDKEAHEEHLRIVLQTLRDKLLYTKFSKCEFWLEQVVFLGHVLLAKGVSVDQQKGEAVVNWERSTSATEVLSFLGLARY

Query:  YRHFIEDFSRLALLLTTLTRKNAKFEWSDKCE
        YR FIEDFSRLAL LT LTRKN KFEWSDKCE
Subjt:  YRHFIEDFSRLALLLTTLTRKNAKFEWSDKCE

A0A5A7U819 Reverse transcriptase3.1e-10986.64Show/hide
Query:  MLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLRRIDDLFDQLNGATLFSKIELRSGYHQLKVRESDIPTTTFKTRYGHYVFRVMSFSLTNVPAVFMDLMNR
        +LFVKKKDGTLRLCIDYRQLNKVTIRNKYPL RIDDLFDQL GATLFSKI+LRSGYHQLKVRESDI  T F+TRYGHY FRVM F LTN PAVFMDLMNR
Subjt:  MLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLRRIDDLFDQLNGATLFSKIELRSGYHQLKVRESDIPTTTFKTRYGHYVFRVMSFSLTNVPAVFMDLMNR

Query:  IFHQYLDQFVIMFIDDILVYSVDKEAHEEHLRIVLQTLRDKLLYTKFSKCEFWLEQVVFLGHVLLAKGVSVDQQKGEAVVNWERSTSATEVLSFLGLARY
        IFH+YLDQFVI+FIDDILVYSVD+E+HEEHLRIVLQTLR+K LY KFSKCEFWLEQVVFLGHV+ AKGVSVD QK EAVVNWER  SATEV SFLGLA Y
Subjt:  IFHQYLDQFVIMFIDDILVYSVDKEAHEEHLRIVLQTLRDKLLYTKFSKCEFWLEQVVFLGHVLLAKGVSVDQQKGEAVVNWERSTSATEVLSFLGLARY

Query:  YRHFIEDFSRLALLLTTLTRKNAKFEWSDKCE
        YR FIEDFSRLAL LT LTRKN KFEWSDKCE
Subjt:  YRHFIEDFSRLALLLTTLTRKNAKFEWSDKCE

A0A5A7UBV9 Uncharacterized protein3.1e-10987.45Show/hide
Query:  LFVKKKDGTLRLCIDYRQLNKVTIRNKYPLRRIDDLFDQLNGATLFSKIELRSGYHQLKVRESDIPTTTFKTRYGHYVFRVMSFSLTNVPAVFMDLMNRI
        LFVKKKD TLRLC+DYRQLNKVTIRNKYPL RIDDLFDQL GA LFSKI+LRSGYHQLKVRESDI    F+TRYGHY FRVMSF LTN PAVFMDLMNRI
Subjt:  LFVKKKDGTLRLCIDYRQLNKVTIRNKYPLRRIDDLFDQLNGATLFSKIELRSGYHQLKVRESDIPTTTFKTRYGHYVFRVMSFSLTNVPAVFMDLMNRI

Query:  FHQYLDQFVIMFIDDILVYSVDKEAHEEHLRIVLQTLRDKLLYTKFSKCEFWLEQVVFLGHVLLAKGVSVDQQKGEAVVNWERSTSATEVLSFLGLARYY
        FHQYLDQFVI+FIDDILVYSVD+E+HEEHLRIVLQTLRDK LY KFSKCEFWLEQVVFLGHV+ AKGVSVD QK EAVVNWER TSATEV SFLGLA YY
Subjt:  FHQYLDQFVIMFIDDILVYSVDKEAHEEHLRIVLQTLRDKLLYTKFSKCEFWLEQVVFLGHVLLAKGVSVDQQKGEAVVNWERSTSATEVLSFLGLARYY

Query:  RHFIEDFSRLALLLTTLTRKNAKFEWSDKCE
        R FIEDFSRLAL LT LTRKNAKFEWSDKCE
Subjt:  RHFIEDFSRLALLLTTLTRKNAKFEWSDKCE

A0A5A7V4W9 Reverse transcriptase3.1e-10986.64Show/hide
Query:  MLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLRRIDDLFDQLNGATLFSKIELRSGYHQLKVRESDIPTTTFKTRYGHYVFRVMSFSLTNVPAVFMDLMNR
        +LFVKKKDGTLRLCIDYRQLNKVTIRNKYPL RIDDLFDQL GATLFSKI+LRSGYHQLKVRESDI  T F+TRYGHY FRVM F LTN PAVFMDLMNR
Subjt:  MLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLRRIDDLFDQLNGATLFSKIELRSGYHQLKVRESDIPTTTFKTRYGHYVFRVMSFSLTNVPAVFMDLMNR

Query:  IFHQYLDQFVIMFIDDILVYSVDKEAHEEHLRIVLQTLRDKLLYTKFSKCEFWLEQVVFLGHVLLAKGVSVDQQKGEAVVNWERSTSATEVLSFLGLARY
        IFH+YLDQFVI+FIDDILVYSVD+E+HEEHLRIVLQTLR+K LY KFSKCEFWLEQVVFLGHV+ AKGVSVD QK EAVVNWER  SATEV SFLGLA Y
Subjt:  IFHQYLDQFVIMFIDDILVYSVDKEAHEEHLRIVLQTLRDKLLYTKFSKCEFWLEQVVFLGHVLLAKGVSVDQQKGEAVVNWERSTSATEVLSFLGLARY

Query:  YRHFIEDFSRLALLLTTLTRKNAKFEWSDKCE
        YR FIEDFSRLAL LT LTRKN KFEWSDKCE
Subjt:  YRHFIEDFSRLALLLTTLTRKNAKFEWSDKCE

A0A5A7VNK4 Reverse transcriptase3.1e-10986.64Show/hide
Query:  MLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLRRIDDLFDQLNGATLFSKIELRSGYHQLKVRESDIPTTTFKTRYGHYVFRVMSFSLTNVPAVFMDLMNR
        +LFVKKKDGTLRLCIDYRQLNKVTIRNKYPL RIDDLFDQL GATLFSKI+LRSGYHQLKVRESDI  T F+TRYGHY FRVM F LTN PAVFMDLMNR
Subjt:  MLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLRRIDDLFDQLNGATLFSKIELRSGYHQLKVRESDIPTTTFKTRYGHYVFRVMSFSLTNVPAVFMDLMNR

Query:  IFHQYLDQFVIMFIDDILVYSVDKEAHEEHLRIVLQTLRDKLLYTKFSKCEFWLEQVVFLGHVLLAKGVSVDQQKGEAVVNWERSTSATEVLSFLGLARY
        IFH+YLDQFVI+FIDDILVYSVD+E+HEEHLRIVLQTLR+K LY KFSKCEFWLEQVVFLGHV+ AKGVSVD QK EAVVNWER  SATEV SFLGLA Y
Subjt:  IFHQYLDQFVIMFIDDILVYSVDKEAHEEHLRIVLQTLRDKLLYTKFSKCEFWLEQVVFLGHVLLAKGVSVDQQKGEAVVNWERSTSATEVLSFLGLARY

Query:  YRHFIEDFSRLALLLTTLTRKNAKFEWSDKCE
        YR FIEDFSRLAL LT LTRKN KFEWSDKCE
Subjt:  YRHFIEDFSRLALLLTTLTRKNAKFEWSDKCE

SwissProt top hitse value%identityAlignment
P04323 Retrovirus-related Pol polyprotein from transposon 17.62.1e-3834.51Show/hide
Query:  KKKDGT----LRLCIDYRQLNKVTIRNKYPLRRIDDLFDQLNGATLFSKIELRSGYHQLKVRESDIPTTTFKTRYGHYVFRVMSFSLTNVPAVFMDLMNR
        KK+D +     R+ IDYR+LN++T+ +++P+  +D++  +L     F+ I+L  G+HQ+++    +  T F T++GHY +  M F L N PA F   MN 
Subjt:  KKKDGT----LRLCIDYRQLNKVTIRNKYPLRRIDDLFDQLNGATLFSKIELRSGYHQLKVRESDIPTTTFKTRYGHYVFRVMSFSLTNVPAVFMDLMNR

Query:  IFHQYLDQFVIMFIDDILVYSVDKEAHEEHLRIVLQTLRDKLLYTKFSKCEFWLEQVVFLGHVLLAKGVSVDQQKGEAVVNWERSTSATEVLSFLGLARY
        I    L++  ++++DDI+V+S   + H + L +V + L    L  +  KCEF  ++  FLGHVL   G+  + +K EA+  +   T   E+ +FLGL  Y
Subjt:  IFHQYLDQFVIMFIDDILVYSVDKEAHEEHLRIVLQTLRDKLLYTKFSKCEFWLEQVVFLGHVLLAKGVSVDQQKGEAVVNWERSTSATEVLSFLGLARY

Query:  YRHFIEDFSRLALLLTTLTRKNAKFE
        YR FI +F+ +A  +T   +KN K +
Subjt:  YRHFIEDFSRLALLLTTLTRKNAKFE

P0CT34 Transposon Tf2-1 polyprotein3.6e-3834.65Show/hide
Query:  MLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLRRIDDLFDQLNGATLFSKIELRSGYHQLKVRESDIPTTTFKTRYGHYVFRVMSFSLTNVPAVFMDLMNR
        ++FV KK+GTLR+ +DY+ LNK    N YPL  I+ L  ++ G+T+F+K++L+S YH ++VR+ D     F+   G + + VM + ++  PA F   +N 
Subjt:  MLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLRRIDDLFDQLNGATLFSKIELRSGYHQLKVRESDIPTTTFKTRYGHYVFRVMSFSLTNVPAVFMDLMNR

Query:  IFHQYLDQFVIMFIDDILVYSVDKEAHEEHLRIVLQTLRDKLLYTKFSKCEFWLEQVVFLGHVLLAKGVSVDQQKGEAVVNWERSTSATEVLSFLGLARY
        I  +  +  V+ ++DDIL++S  +  H +H++ VLQ L++  L    +KCEF   QV F+G+ +  KG +  Q+  + V+ W++  +  E+  FLG   Y
Subjt:  IFHQYLDQFVIMFIDDILVYSVDKEAHEEHLRIVLQTLRDKLLYTKFSKCEFWLEQVVFLGHVLLAKGVSVDQQKGEAVVNWERSTSATEVLSFLGLARY

Query:  YRHFIEDFSRLALLLTTLTRKNAKFEWS
         R FI   S+L   L  L +K+ +++W+
Subjt:  YRHFIEDFSRLALLLTTLTRKNAKFEWS

P0CT35 Transposon Tf2-2 polyprotein3.6e-3834.65Show/hide
Query:  MLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLRRIDDLFDQLNGATLFSKIELRSGYHQLKVRESDIPTTTFKTRYGHYVFRVMSFSLTNVPAVFMDLMNR
        ++FV KK+GTLR+ +DY+ LNK    N YPL  I+ L  ++ G+T+F+K++L+S YH ++VR+ D     F+   G + + VM + ++  PA F   +N 
Subjt:  MLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLRRIDDLFDQLNGATLFSKIELRSGYHQLKVRESDIPTTTFKTRYGHYVFRVMSFSLTNVPAVFMDLMNR

Query:  IFHQYLDQFVIMFIDDILVYSVDKEAHEEHLRIVLQTLRDKLLYTKFSKCEFWLEQVVFLGHVLLAKGVSVDQQKGEAVVNWERSTSATEVLSFLGLARY
        I  +  +  V+ ++DDIL++S  +  H +H++ VLQ L++  L    +KCEF   QV F+G+ +  KG +  Q+  + V+ W++  +  E+  FLG   Y
Subjt:  IFHQYLDQFVIMFIDDILVYSVDKEAHEEHLRIVLQTLRDKLLYTKFSKCEFWLEQVVFLGHVLLAKGVSVDQQKGEAVVNWERSTSATEVLSFLGLARY

Query:  YRHFIEDFSRLALLLTTLTRKNAKFEWS
         R FI   S+L   L  L +K+ +++W+
Subjt:  YRHFIEDFSRLALLLTTLTRKNAKFEWS

P0CT36 Transposon Tf2-3 polyprotein3.6e-3834.65Show/hide
Query:  MLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLRRIDDLFDQLNGATLFSKIELRSGYHQLKVRESDIPTTTFKTRYGHYVFRVMSFSLTNVPAVFMDLMNR
        ++FV KK+GTLR+ +DY+ LNK    N YPL  I+ L  ++ G+T+F+K++L+S YH ++VR+ D     F+   G + + VM + ++  PA F   +N 
Subjt:  MLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLRRIDDLFDQLNGATLFSKIELRSGYHQLKVRESDIPTTTFKTRYGHYVFRVMSFSLTNVPAVFMDLMNR

Query:  IFHQYLDQFVIMFIDDILVYSVDKEAHEEHLRIVLQTLRDKLLYTKFSKCEFWLEQVVFLGHVLLAKGVSVDQQKGEAVVNWERSTSATEVLSFLGLARY
        I  +  +  V+ ++DDIL++S  +  H +H++ VLQ L++  L    +KCEF   QV F+G+ +  KG +  Q+  + V+ W++  +  E+  FLG   Y
Subjt:  IFHQYLDQFVIMFIDDILVYSVDKEAHEEHLRIVLQTLRDKLLYTKFSKCEFWLEQVVFLGHVLLAKGVSVDQQKGEAVVNWERSTSATEVLSFLGLARY

Query:  YRHFIEDFSRLALLLTTLTRKNAKFEWS
         R FI   S+L   L  L +K+ +++W+
Subjt:  YRHFIEDFSRLALLLTTLTRKNAKFEWS

P0CT41 Transposon Tf2-12 polyprotein3.6e-3834.65Show/hide
Query:  MLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLRRIDDLFDQLNGATLFSKIELRSGYHQLKVRESDIPTTTFKTRYGHYVFRVMSFSLTNVPAVFMDLMNR
        ++FV KK+GTLR+ +DY+ LNK    N YPL  I+ L  ++ G+T+F+K++L+S YH ++VR+ D     F+   G + + VM + ++  PA F   +N 
Subjt:  MLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLRRIDDLFDQLNGATLFSKIELRSGYHQLKVRESDIPTTTFKTRYGHYVFRVMSFSLTNVPAVFMDLMNR

Query:  IFHQYLDQFVIMFIDDILVYSVDKEAHEEHLRIVLQTLRDKLLYTKFSKCEFWLEQVVFLGHVLLAKGVSVDQQKGEAVVNWERSTSATEVLSFLGLARY
        I  +  +  V+ ++DDIL++S  +  H +H++ VLQ L++  L    +KCEF   QV F+G+ +  KG +  Q+  + V+ W++  +  E+  FLG   Y
Subjt:  IFHQYLDQFVIMFIDDILVYSVDKEAHEEHLRIVLQTLRDKLLYTKFSKCEFWLEQVVFLGHVLLAKGVSVDQQKGEAVVNWERSTSATEVLSFLGLARY

Query:  YRHFIEDFSRLALLLTTLTRKNAKFEWS
         R FI   S+L   L  L +K+ +++W+
Subjt:  YRHFIEDFSRLALLLTTLTRKNAKFEWS

Arabidopsis top hitse value%identityAlignment
ATMG00860.1 DNA/RNA polymerases superfamily protein3.7e-1437.25Show/hide
Query:  HLRIVLQTLRDKLLYTKFSKCEFWLEQVVFLG--HVLLAKGVSVDQQKGEAVVNWERSTSATEVLSFLGLARYYRHFIEDFSRLALLLTTLTRKNAKFEW
        HL +VLQ       Y    KC F   Q+ +LG  H++  +GVS D  K EA+V W    + TE+  FLGL  YYR F++++ ++   LT L +KN+  +W
Subjt:  HLRIVLQTLRDKLLYTKFSKCEFWLEQVVFLG--HVLLAKGVSVDQQKGEAVVNWERSTSATEVLSFLGLARYYRHFIEDFSRLALLLTTLTRKNAKFEW

Query:  SD
        ++
Subjt:  SD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTATTTGTGAAAAAGAAAGATGGTACCCTCAGATTATGTATTGACTATAGACAGTTAAATAAGGTTACAATACGTAACAAGTATCCTTTACGACGCATCGATGACTT
ATTTGATCAACTAAATGGAGCAACATTGTTCTCTAAGATTGAGTTAAGATCAGGATACCACCAGTTGAAGGTTAGAGAATCAGATATTCCTACGACAACATTCAAAACGA
GGTATGGGCACTATGTTTTTCGAGTTATGTCATTCAGTTTAACGAATGTGCCAGCGGTTTTCATGGATCTCATGAACAGGATCTTTCATCAGTATTTAGATCAGTTTGTG
ATCATGTTCATTGATGATATACTAGTTTACTCGGTTGACAAGGAAGCCCATGAGGAACATCTGAGGATTGTTCTACAGACTCTACGTGATAAACTATTGTACACTAAGTT
CAGCAAATGTGAGTTTTGGCTGGAACAAGTAGTATTCTTGGGGCATGTACTTTTAGCAAAAGGAGTTAGTGTCGATCAACAAAAAGGGGAAGCGGTTGTCAATTGGGAAA
GATCAACCAGTGCGACAGAAGTACTTAGTTTTCTGGGTTTGGCAAGATACTATAGGCATTTTATTGAGGATTTCTCACGATTGGCATTGCTCTTGACAACTTTGACAAGG
AAGAATGCTAAGTTTGAGTGGTCAGATAAATGCGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGCTATTTGTGAAAAAGAAAGATGGTACCCTCAGATTATGTATTGACTATAGACAGTTAAATAAGGTTACAATACGTAACAAGTATCCTTTACGACGCATCGATGACTT
ATTTGATCAACTAAATGGAGCAACATTGTTCTCTAAGATTGAGTTAAGATCAGGATACCACCAGTTGAAGGTTAGAGAATCAGATATTCCTACGACAACATTCAAAACGA
GGTATGGGCACTATGTTTTTCGAGTTATGTCATTCAGTTTAACGAATGTGCCAGCGGTTTTCATGGATCTCATGAACAGGATCTTTCATCAGTATTTAGATCAGTTTGTG
ATCATGTTCATTGATGATATACTAGTTTACTCGGTTGACAAGGAAGCCCATGAGGAACATCTGAGGATTGTTCTACAGACTCTACGTGATAAACTATTGTACACTAAGTT
CAGCAAATGTGAGTTTTGGCTGGAACAAGTAGTATTCTTGGGGCATGTACTTTTAGCAAAAGGAGTTAGTGTCGATCAACAAAAAGGGGAAGCGGTTGTCAATTGGGAAA
GATCAACCAGTGCGACAGAAGTACTTAGTTTTCTGGGTTTGGCAAGATACTATAGGCATTTTATTGAGGATTTCTCACGATTGGCATTGCTCTTGACAACTTTGACAAGG
AAGAATGCTAAGTTTGAGTGGTCAGATAAATGCGAATGA
Protein sequenceShow/hide protein sequence
MLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLRRIDDLFDQLNGATLFSKIELRSGYHQLKVRESDIPTTTFKTRYGHYVFRVMSFSLTNVPAVFMDLMNRIFHQYLDQFV
IMFIDDILVYSVDKEAHEEHLRIVLQTLRDKLLYTKFSKCEFWLEQVVFLGHVLLAKGVSVDQQKGEAVVNWERSTSATEVLSFLGLARYYRHFIEDFSRLALLLTTLTR
KNAKFEWSDKCE