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Cmc08g0225831 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc08g0225831
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionProtein FAR1-RELATED SEQUENCE 4
Genome locationCMiso1.1chr08:17168977..17169545
RNA-Seq ExpressionCmc08g0225831
SyntenyCmc08g0225831
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035384.1 protein FAR-RED IMPAIRED RESPONSE 1-like [Cucumis melo var. makuwa]8.6e-4985.71Show/hide
Query:  SWRVKEHMVKILHGDAVKSYALIPRFFDKLVESNPGTCTSLEIDDCGHFKFCFMAFCASIKGWKYCRPIISVDGTFLKCKFGGILLIASSQDGNNQIFPL
        +WRVKEHMVKILH D V+SYALIPRFFDKLVESNP TCT+LE+DD GHFKFCFMAF ASI+GWKYCR IISVDGTFLKCKFGGILL ASSQDGNNQIFPL
Subjt:  SWRVKEHMVKILHGDAVKSYALIPRFFDKLVESNPGTCTSLEIDDCGHFKFCFMAFCASIKGWKYCRPIISVDGTFLKCKFGGILLIASSQDGNNQIFPL

Query:  AFANVDSENDES
        AF  VD END S
Subjt:  AFANVDSENDES

KAA0036500.1 protein FAR1-RELATED SEQUENCE 4 [Cucumis melo var. makuwa]7.3e-4883.93Show/hide
Query:  SWRVKEHMVKILHGDAVKSYALIPRFFDKLVESNPGTCTSLEIDDCGHFKFCFMAFCASIKGWKYCRPIISVDGTFLKCKFGGILLIASSQDGNNQIFPL
        +WR+KEHMVKILHGD V+SYALI RFFDKLV+SNPGTCT+LE+DD GHFKFCFMAF ASI+ WKYC PIIS+DGTFLKCKFG ILL ASSQDGNNQIFPL
Subjt:  SWRVKEHMVKILHGDAVKSYALIPRFFDKLVESNPGTCTSLEIDDCGHFKFCFMAFCASIKGWKYCRPIISVDGTFLKCKFGGILLIASSQDGNNQIFPL

Query:  AFANVDSENDES
        AFA VDSEND S
Subjt:  AFANVDSENDES

KAA0047748.1 uncharacterized protein E6C27_scaffold1059G00070 [Cucumis melo var. makuwa]8.6e-4985.71Show/hide
Query:  SWRVKEHMVKILHGDAVKSYALIPRFFDKLVESNPGTCTSLEIDDCGHFKFCFMAFCASIKGWKYCRPIISVDGTFLKCKFGGILLIASSQDGNNQIFPL
        +WR KEHMVKILHGD V+ YALIPRFFDKLVESNPGTCT+LE+DD GHFKFCFM F ASI+GWKYCRPIISVD TFLKCKFGGI L ASSQDGNNQIFPL
Subjt:  SWRVKEHMVKILHGDAVKSYALIPRFFDKLVESNPGTCTSLEIDDCGHFKFCFMAFCASIKGWKYCRPIISVDGTFLKCKFGGILLIASSQDGNNQIFPL

Query:  AFANVDSENDES
        AFA VDSEND S
Subjt:  AFANVDSENDES

TYK01612.1 uncharacterized protein E5676_scaffold451G002110 [Cucumis melo var. makuwa]3.0e-4985.71Show/hide
Query:  SWRVKEHMVKILHGDAVKSYALIPRFFDKLVESNPGTCTSLEIDDCGHFKFCFMAFCASIKGWKYCRPIISVDGTFLKCKFGGILLIASSQDGNNQIFPL
        +WR KEHMVKILH D V+SY LIPRFFDKLVESNPGTCT+LE+DD GHFKFCFMAF ASI+GWKYCRPIISVD TFLKCKFGGILL  SSQDGNNQIFPL
Subjt:  SWRVKEHMVKILHGDAVKSYALIPRFFDKLVESNPGTCTSLEIDDCGHFKFCFMAFCASIKGWKYCRPIISVDGTFLKCKFGGILLIASSQDGNNQIFPL

Query:  AFANVDSENDES
        AFA VDSEND S
Subjt:  AFANVDSENDES

TYK02872.1 protein FAR1-RELATED SEQUENCE 4 [Cucumis melo var. makuwa]3.0e-4984.82Show/hide
Query:  SWRVKEHMVKILHGDAVKSYALIPRFFDKLVESNPGTCTSLEIDDCGHFKFCFMAFCASIKGWKYCRPIISVDGTFLKCKFGGILLIASSQDGNNQIFPL
        +WR KEHMVKILHGD V+SYALIPRFFDKLVESNPGTCT+LE+DD GHFKFCFMAF ASI+GWKYC+PII VDG FLKCKFGGILL ASSQDGNNQIFPL
Subjt:  SWRVKEHMVKILHGDAVKSYALIPRFFDKLVESNPGTCTSLEIDDCGHFKFCFMAFCASIKGWKYCRPIISVDGTFLKCKFGGILLIASSQDGNNQIFPL

Query:  AFANVDSENDES
        AF  VDS+ND S
Subjt:  AFANVDSENDES

TrEMBL top hitse value%identityAlignment
A0A5D3BMN4 Protein FAR1-RELATED SEQUENCE 43.5e-4883.93Show/hide
Query:  SWRVKEHMVKILHGDAVKSYALIPRFFDKLVESNPGTCTSLEIDDCGHFKFCFMAFCASIKGWKYCRPIISVDGTFLKCKFGGILLIASSQDGNNQIFPL
        +WR+KEHMVKILHGD V+SYALI RFFDKLV+SNPGTCT+LE+DD GHFKFCFMAF ASI+ WKYC PIIS+DGTFLKCKFG ILL ASSQDGNNQIFPL
Subjt:  SWRVKEHMVKILHGDAVKSYALIPRFFDKLVESNPGTCTSLEIDDCGHFKFCFMAFCASIKGWKYCRPIISVDGTFLKCKFGGILLIASSQDGNNQIFPL

Query:  AFANVDSENDES
        AFA VDSEND S
Subjt:  AFANVDSENDES

A0A5D3BS45 MULE domain-containing protein1.4e-4985.71Show/hide
Query:  SWRVKEHMVKILHGDAVKSYALIPRFFDKLVESNPGTCTSLEIDDCGHFKFCFMAFCASIKGWKYCRPIISVDGTFLKCKFGGILLIASSQDGNNQIFPL
        +WR KEHMVKILH D V+SY LIPRFFDKLVESNPGTCT+LE+DD GHFKFCFMAF ASI+GWKYCRPIISVD TFLKCKFGGILL  SSQDGNNQIFPL
Subjt:  SWRVKEHMVKILHGDAVKSYALIPRFFDKLVESNPGTCTSLEIDDCGHFKFCFMAFCASIKGWKYCRPIISVDGTFLKCKFGGILLIASSQDGNNQIFPL

Query:  AFANVDSENDES
        AFA VDSEND S
Subjt:  AFANVDSENDES

A0A5D3BUA2 MULE domain-containing protein4.2e-4985.71Show/hide
Query:  SWRVKEHMVKILHGDAVKSYALIPRFFDKLVESNPGTCTSLEIDDCGHFKFCFMAFCASIKGWKYCRPIISVDGTFLKCKFGGILLIASSQDGNNQIFPL
        +WR KEHMVKILHGD V+ YALIPRFFDKLVESNPGTCT+LE+DD GHFKFCFM F ASI+GWKYCRPIISVD TFLKCKFGGI L ASSQDGNNQIFPL
Subjt:  SWRVKEHMVKILHGDAVKSYALIPRFFDKLVESNPGTCTSLEIDDCGHFKFCFMAFCASIKGWKYCRPIISVDGTFLKCKFGGILLIASSQDGNNQIFPL

Query:  AFANVDSENDES
        AFA VDSEND S
Subjt:  AFANVDSENDES

A0A5D3BVN2 Protein FAR1-RELATED SEQUENCE 41.4e-4984.82Show/hide
Query:  SWRVKEHMVKILHGDAVKSYALIPRFFDKLVESNPGTCTSLEIDDCGHFKFCFMAFCASIKGWKYCRPIISVDGTFLKCKFGGILLIASSQDGNNQIFPL
        +WR KEHMVKILHGD V+SYALIPRFFDKLVESNPGTCT+LE+DD GHFKFCFMAF ASI+GWKYC+PII VDG FLKCKFGGILL ASSQDGNNQIFPL
Subjt:  SWRVKEHMVKILHGDAVKSYALIPRFFDKLVESNPGTCTSLEIDDCGHFKFCFMAFCASIKGWKYCRPIISVDGTFLKCKFGGILLIASSQDGNNQIFPL

Query:  AFANVDSENDES
        AF  VDS+ND S
Subjt:  AFANVDSENDES

A0A5D3BZ76 Protein FAR-RED IMPAIRED RESPONSE 1-like4.2e-4985.71Show/hide
Query:  SWRVKEHMVKILHGDAVKSYALIPRFFDKLVESNPGTCTSLEIDDCGHFKFCFMAFCASIKGWKYCRPIISVDGTFLKCKFGGILLIASSQDGNNQIFPL
        +WRVKEHMVKILH D V+SYALIPRFFDKLVESNP TCT+LE+DD GHFKFCFMAF ASI+GWKYCR IISVDGTFLKCKFGGILL ASSQDGNNQIFPL
Subjt:  SWRVKEHMVKILHGDAVKSYALIPRFFDKLVESNPGTCTSLEIDDCGHFKFCFMAFCASIKGWKYCRPIISVDGTFLKCKFGGILLIASSQDGNNQIFPL

Query:  AFANVDSENDES
        AF  VD END S
Subjt:  AFANVDSENDES

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G49920.1 MuDR family transposase6.9e-1240Show/hide
Query:  KEHMVKILHGDAVKSYALIPRFFDKLVESNPGTCTSLEIDDCGH------FKFCFMAFCASIKGWKYCRPIISVDGTFLKCKFGGILLIASSQDGNNQIF
        K   +K   GD  +S+ LIP+    L  SN G     + D   H      F+  F AF  SI+G+++CRP+I VD   L  K+   L+IAS+ D  NQ F
Subjt:  KEHMVKILHGDAVKSYALIPRFFDKLVESNPGTCTSLEIDDCGH------FKFCFMAFCASIKGWKYCRPIISVDGTFLKCKFGGILLIASSQDGNNQIF

Query:  PLAFA
        PLAFA
Subjt:  PLAFA

AT1G64255.1 MuDR family transposase9.9e-1138.46Show/hide
Query:  KEHMVKILHGDAVKSYALIPRFFDKLVESNPGTCTSLEID---DCGHFKFC--FMAFCASIKGWKYCRPIISVDGTFLKCKFGGILLIASSQDGNNQIFP
        KE  +K + GD  +S+   P+    L  SN G     + D   +     FC  F AF  SI+G+++CRP+I VD   L C++   L+IAS  D  N+ FP
Subjt:  KEHMVKILHGDAVKSYALIPRFFDKLVESNPGTCTSLEID---DCGHFKFC--FMAFCASIKGWKYCRPIISVDGTFLKCKFGGILLIASSQDGNNQIFP

Query:  LAFA
        LAFA
Subjt:  LAFA

AT1G64260.1 MuDR family transposase1.3e-1035.58Show/hide
Query:  KEHMVKILHGDAVKSYALIPRFFDKLVESNPGTCTSLEID-----DCGHFKFCFMAFCASIKGWKYCRPIISVDGTFLKCKFGGILLIASSQDGNNQIFP
        K  ++K + GD  +S+ ++P+       SN G     + D     D   F+  F +F  SI+G+++CRP+I VD   L  K+   L+IAS  D  N+ FP
Subjt:  KEHMVKILHGDAVKSYALIPRFFDKLVESNPGTCTSLEID-----DCGHFKFCFMAFCASIKGWKYCRPIISVDGTFLKCKFGGILLIASSQDGNNQIFP

Query:  LAFA
        LAFA
Subjt:  LAFA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGTGGTCGTGTTGTCGTCGTCTTGGAGGGTGAAAGAACATATGGTAAAGATATTACATGGTGATGCAGTTAAATCATATGCATTGATTCCAAGATTCTTTGATAA
ATTGGTTGAATCTAACCCAGGTACATGCACTTCTTTAGAAATCGATGATTGTGGTCATTTCAAGTTTTGCTTTATGGCTTTTTGTGCATCAATTAAGGGGTGGAAATATT
GTAGACCTATTATTTCTGTTGATGGGACATTTTTGAAGTGTAAGTTTGGTGGCATTCTATTAATAGCCTCATCACAAGATGGTAACAATCAAATCTTCCCTCTTGCTTTT
GCCAATGTAGATTCTGAAAATGATGAATCATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTTGTGGTCGTGTTGTCGTCGTCTTGGAGGGTGAAAGAACATATGGTAAAGATATTACATGGTGATGCAGTTAAATCATATGCATTGATTCCAAGATTCTTTGATAA
ATTGGTTGAATCTAACCCAGGTACATGCACTTCTTTAGAAATCGATGATTGTGGTCATTTCAAGTTTTGCTTTATGGCTTTTTGTGCATCAATTAAGGGGTGGAAATATT
GTAGACCTATTATTTCTGTTGATGGGACATTTTTGAAGTGTAAGTTTGGTGGCATTCTATTAATAGCCTCATCACAAGATGGTAACAATCAAATCTTCCCTCTTGCTTTT
GCCAATGTAGATTCTGAAAATGATGAATCATGA
Protein sequenceShow/hide protein sequence
MFVVVLSSSWRVKEHMVKILHGDAVKSYALIPRFFDKLVESNPGTCTSLEIDDCGHFKFCFMAFCASIKGWKYCRPIISVDGTFLKCKFGGILLIASSQDGNNQIFPLAF
ANVDSENDES