| GenBank top hits | e value | %identity | Alignment |
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| KAA0053406.1 gag/pol protein [Cucumis melo var. makuwa] | 3.7e-71 | 81.6 | Show/hide |
Query: MMSFTQLSDSFWGYALEIAIYILNNVPSKSISKTPYELWKGCKGSLRHFRIWGCPAYVLVQNPKKLEHRSKLCLFLGYPKESKGGLFYDPQENKVFVSTN
MM+F QL DSFWGYALE AIYILNNVPSK++S+TPYELWKG KGSLR+FRIWGCPA+VLVQNPKKLEH SKLCLF+GYPKESKG LFYDPQENKVFVSTN
Subjt: MMSFTQLSDSFWGYALEIAIYILNNVPSKSISKTPYELWKGCKGSLRHFRIWGCPAYVLVQNPKKLEHRSKLCLFLGYPKESKGGLFYDPQENKVFVSTN
Query: VTFLKEDHIRNHQTRNKLVLKEISKNSTDRLSSSTKVVDKTRSIGQTHPSQELGEPRCNGRVV
FL+EDHIRNHQ +KLVL+EIS N+T+R SSSTKV+DKTR+IGQTHPSQEL EP +GRVV
Subjt: VTFLKEDHIRNHQTRNKLVLKEISKNSTDRLSSSTKVVDKTRSIGQTHPSQELGEPRCNGRVV
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| TYK03644.1 gag/pol protein [Cucumis melo var. makuwa] | 2.1e-74 | 85.28 | Show/hide |
Query: MMSFTQLSDSFWGYALEIAIYILNNVPSKSISKTPYELWKGCKGSLRHFRIWGCPAYVLVQNPKKLEHRSKLCLFLGYPKESKGGLFYDPQENKVFVSTN
MMSFTQL DSFW YALE IYILNNVPSKS+S+TPYELWKG KGSLRHFRIWGCPA+V VQNPKKLE RSKLCLF+GYPKESKGGLFYDPQENKVFVSTN
Subjt: MMSFTQLSDSFWGYALEIAIYILNNVPSKSISKTPYELWKGCKGSLRHFRIWGCPAYVLVQNPKKLEHRSKLCLFLGYPKESKGGLFYDPQENKVFVSTN
Query: VTFLKEDHIRNHQTRNKLVLKEISKNSTDRLSSSTKVVDKTRSIGQTHPSQELGEPRCNGRVV
TFL+EDHIRNHQTR+KLVL+EISKN+TDR SS TKVVDKTR+IGQTH QELG+PR +GRVV
Subjt: VTFLKEDHIRNHQTRNKLVLKEISKNSTDRLSSSTKVVDKTRSIGQTHPSQELGEPRCNGRVV
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| TYK04597.1 gag/pol protein [Cucumis melo var. makuwa] | 1.4e-70 | 83.12 | Show/hide |
Query: FTQLSDSFWGYALEIAIYILNNVPSKSISKTPYELWKGCKGSLRHFRIWGCPAYVLVQNPKKLEHRSKLCLFLGYPKESKGGLFYDPQENKVFVSTNVTF
F ++ F GYALE IYILNNVPSKS+S+TPYELWKG KGSLRHFRIWGCPA+VLVQNPKKLEHRSKLCLF+GY KESKGGLFYDPQENKVFVSTN TF
Subjt: FTQLSDSFWGYALEIAIYILNNVPSKSISKTPYELWKGCKGSLRHFRIWGCPAYVLVQNPKKLEHRSKLCLFLGYPKESKGGLFYDPQENKVFVSTNVTF
Query: LKEDHIRNHQTRNKLVLKEISKNSTDRLSSSTKVVDKTRSIGQTHPSQELGEPRCNGRVV
L+EDHIRNHQTR+KLVL+EI KN+TDR SSSTKVVDKTR+IG THPSQE GEPR +GRVV
Subjt: LKEDHIRNHQTRNKLVLKEISKNSTDRLSSSTKVVDKTRSIGQTHPSQELGEPRCNGRVV
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| TYK15887.1 gag/pol protein [Cucumis melo var. makuwa] | 2.9e-71 | 80.98 | Show/hide |
Query: MMSFTQLSDSFWGYALEIAIYILNNVPSKSISKTPYELWKGCKGSLRHFRIWGCPAYVLVQNPKKLEHRSKLCLFLGYPKESKGGLFYDPQENKVFVSTN
MM+F Q DSFWGYALE AIYILNNVPSK++S+TPYELWKG KGSLR+FRIWGCPA+VLVQNPKKLEH SKLCLF+GYPKESKG LFYDPQENKVFVSTN
Subjt: MMSFTQLSDSFWGYALEIAIYILNNVPSKSISKTPYELWKGCKGSLRHFRIWGCPAYVLVQNPKKLEHRSKLCLFLGYPKESKGGLFYDPQENKVFVSTN
Query: VTFLKEDHIRNHQTRNKLVLKEISKNSTDRLSSSTKVVDKTRSIGQTHPSQELGEPRCNGRVV
FL+EDHIRNHQ +KLVL+EIS N+T++ SSSTKV+DKTR+IGQTHPSQELGEP +GRVV
Subjt: VTFLKEDHIRNHQTRNKLVLKEISKNSTDRLSSSTKVVDKTRSIGQTHPSQELGEPRCNGRVV
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| TYK30724.1 gag/pol protein [Cucumis melo var. makuwa] | 1.4e-73 | 84.66 | Show/hide |
Query: MMSFTQLSDSFWGYALEIAIYILNNVPSKSISKTPYELWKGCKGSLRHFRIWGCPAYVLVQNPKKLEHRSKLCLFLGYPKESKGGLFYDPQENKVFVSTN
M SF QL DSFWGYALE IYILNNVPSKS+S+TPYELWKG KGSLRHFRIWGCP++VLVQNP KLEHRSKLCLF+GYPKESKGGLFYDPQENKVFVS N
Subjt: MMSFTQLSDSFWGYALEIAIYILNNVPSKSISKTPYELWKGCKGSLRHFRIWGCPAYVLVQNPKKLEHRSKLCLFLGYPKESKGGLFYDPQENKVFVSTN
Query: VTFLKEDHIRNHQTRNKLVLKEISKNSTDRLSSSTKVVDKTRSIGQTHPSQELGEPRCNGRVV
TFL+E HIRNHQTRNKLVL+EISKN TDR SS TKVVDKTR+IGQTHPSQELGE R + RVV
Subjt: VTFLKEDHIRNHQTRNKLVLKEISKNSTDRLSSSTKVVDKTRSIGQTHPSQELGEPRCNGRVV
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A5A7UGR3 Gag/pol protein | 1.8e-71 | 81.6 | Show/hide |
Query: MMSFTQLSDSFWGYALEIAIYILNNVPSKSISKTPYELWKGCKGSLRHFRIWGCPAYVLVQNPKKLEHRSKLCLFLGYPKESKGGLFYDPQENKVFVSTN
MM+F QL DSFWGYALE AIYILNNVPSK++S+TPYELWKG KGSLR+FRIWGCPA+VLVQNPKKLEH SKLCLF+GYPKESKG LFYDPQENKVFVSTN
Subjt: MMSFTQLSDSFWGYALEIAIYILNNVPSKSISKTPYELWKGCKGSLRHFRIWGCPAYVLVQNPKKLEHRSKLCLFLGYPKESKGGLFYDPQENKVFVSTN
Query: VTFLKEDHIRNHQTRNKLVLKEISKNSTDRLSSSTKVVDKTRSIGQTHPSQELGEPRCNGRVV
FL+EDHIRNHQ +KLVL+EIS N+T+R SSSTKV+DKTR+IGQTHPSQEL EP +GRVV
Subjt: VTFLKEDHIRNHQTRNKLVLKEISKNSTDRLSSSTKVVDKTRSIGQTHPSQELGEPRCNGRVV
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| A0A5D3BX45 Gag/pol protein | 1.0e-74 | 85.28 | Show/hide |
Query: MMSFTQLSDSFWGYALEIAIYILNNVPSKSISKTPYELWKGCKGSLRHFRIWGCPAYVLVQNPKKLEHRSKLCLFLGYPKESKGGLFYDPQENKVFVSTN
MMSFTQL DSFW YALE IYILNNVPSKS+S+TPYELWKG KGSLRHFRIWGCPA+V VQNPKKLE RSKLCLF+GYPKESKGGLFYDPQENKVFVSTN
Subjt: MMSFTQLSDSFWGYALEIAIYILNNVPSKSISKTPYELWKGCKGSLRHFRIWGCPAYVLVQNPKKLEHRSKLCLFLGYPKESKGGLFYDPQENKVFVSTN
Query: VTFLKEDHIRNHQTRNKLVLKEISKNSTDRLSSSTKVVDKTRSIGQTHPSQELGEPRCNGRVV
TFL+EDHIRNHQTR+KLVL+EISKN+TDR SS TKVVDKTR+IGQTH QELG+PR +GRVV
Subjt: VTFLKEDHIRNHQTRNKLVLKEISKNSTDRLSSSTKVVDKTRSIGQTHPSQELGEPRCNGRVV
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| A0A5D3BYJ2 Gag/pol protein | 6.9e-71 | 83.12 | Show/hide |
Query: FTQLSDSFWGYALEIAIYILNNVPSKSISKTPYELWKGCKGSLRHFRIWGCPAYVLVQNPKKLEHRSKLCLFLGYPKESKGGLFYDPQENKVFVSTNVTF
F ++ F GYALE IYILNNVPSKS+S+TPYELWKG KGSLRHFRIWGCPA+VLVQNPKKLEHRSKLCLF+GY KESKGGLFYDPQENKVFVSTN TF
Subjt: FTQLSDSFWGYALEIAIYILNNVPSKSISKTPYELWKGCKGSLRHFRIWGCPAYVLVQNPKKLEHRSKLCLFLGYPKESKGGLFYDPQENKVFVSTNVTF
Query: LKEDHIRNHQTRNKLVLKEISKNSTDRLSSSTKVVDKTRSIGQTHPSQELGEPRCNGRVV
L+EDHIRNHQTR+KLVL+EI KN+TDR SSSTKVVDKTR+IG THPSQE GEPR +GRVV
Subjt: LKEDHIRNHQTRNKLVLKEISKNSTDRLSSSTKVVDKTRSIGQTHPSQELGEPRCNGRVV
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| A0A5D3CVD7 Gag/pol protein | 1.4e-71 | 80.98 | Show/hide |
Query: MMSFTQLSDSFWGYALEIAIYILNNVPSKSISKTPYELWKGCKGSLRHFRIWGCPAYVLVQNPKKLEHRSKLCLFLGYPKESKGGLFYDPQENKVFVSTN
MM+F Q DSFWGYALE AIYILNNVPSK++S+TPYELWKG KGSLR+FRIWGCPA+VLVQNPKKLEH SKLCLF+GYPKESKG LFYDPQENKVFVSTN
Subjt: MMSFTQLSDSFWGYALEIAIYILNNVPSKSISKTPYELWKGCKGSLRHFRIWGCPAYVLVQNPKKLEHRSKLCLFLGYPKESKGGLFYDPQENKVFVSTN
Query: VTFLKEDHIRNHQTRNKLVLKEISKNSTDRLSSSTKVVDKTRSIGQTHPSQELGEPRCNGRVV
FL+EDHIRNHQ +KLVL+EIS N+T++ SSSTKV+DKTR+IGQTHPSQELGEP +GRVV
Subjt: VTFLKEDHIRNHQTRNKLVLKEISKNSTDRLSSSTKVVDKTRSIGQTHPSQELGEPRCNGRVV
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| A0A5D3E496 Gag/pol protein | 6.6e-74 | 84.66 | Show/hide |
Query: MMSFTQLSDSFWGYALEIAIYILNNVPSKSISKTPYELWKGCKGSLRHFRIWGCPAYVLVQNPKKLEHRSKLCLFLGYPKESKGGLFYDPQENKVFVSTN
M SF QL DSFWGYALE IYILNNVPSKS+S+TPYELWKG KGSLRHFRIWGCP++VLVQNP KLEHRSKLCLF+GYPKESKGGLFYDPQENKVFVS N
Subjt: MMSFTQLSDSFWGYALEIAIYILNNVPSKSISKTPYELWKGCKGSLRHFRIWGCPAYVLVQNPKKLEHRSKLCLFLGYPKESKGGLFYDPQENKVFVSTN
Query: VTFLKEDHIRNHQTRNKLVLKEISKNSTDRLSSSTKVVDKTRSIGQTHPSQELGEPRCNGRVV
TFL+E HIRNHQTRNKLVL+EISKN TDR SS TKVVDKTR+IGQTHPSQELGE R + RVV
Subjt: VTFLKEDHIRNHQTRNKLVLKEISKNSTDRLSSSTKVVDKTRSIGQTHPSQELGEPRCNGRVV
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 7.4e-14 | 32.09 | Show/hide |
Query: MMSFTQLSDSFWGYALEIAIYILNNVPSKSI---SKTPYELWKGCKGSLRHFRIWGCPAYVLVQNPK-KLEHRSKLCLFLGYPKESKGGLFYDPQENKVF
M+S +L SFWG A+ A Y++N +PS+++ SKTPYE+W K L+H R++G YV ++N + K + +S +F+GY E G +D K
Subjt: MMSFTQLSDSFWGYALEIAIYILNNVPSKSI---SKTPYELWKGCKGSLRHFRIWGCPAYVLVQNPK-KLEHRSKLCLFLGYPKESKGGLFYDPQENKVF
Query: VSTNVTFLKEDHIRNHQTRNKLVLKEISKNSTDR
V+ +V + + + + + + V + SK S ++
Subjt: VSTNVTFLKEDHIRNHQTRNKLVLKEISKNSTDR
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.4e-12 | 27.85 | Show/hide |
Query: MMSFTQLSDSFWGYALEIAIYILNNVPSKSIS-KTPYELWKGCKGSLRHFRIWGCPAYVLV--QNPKKLEHRSKLCLFLGYPKESKGGLFYDPQENKVFV
M+ +L SFWG A++ A Y++N PS ++ + P +W + S H +++GC A+ V + KL+ +S C+F+GY E G +DP + KV
Subjt: MMSFTQLSDSFWGYALEIAIYILNNVPSKSIS-KTPYELWKGCKGSLRHFRIWGCPAYVLV--QNPKKLEHRSKLCLFLGYPKESKGGLFYDPQENKVFV
Query: STNVTFLK---------EDHIRNHQTRNKLVLKEISKNSTDRLSSSTKVVDKTRSIGQ
S +V F + + ++N N + + S N T S++ +V ++ G+
Subjt: STNVTFLK---------EDHIRNHQTRNKLVLKEISKNSTDRLSSSTKVVDKTRSIGQ
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.1e-09 | 26.42 | Show/hide |
Query: MMSFTQLSDSFWGYALEIAIYILNNVPSKSIS-KTPYELWKGCKGSLRHFRIWGCPAYVLVQ--NPKKLEHRSKLCLFLGYPKESKGGLFYDPQENKVFV
++S + ++W YA +A+Y++N +P+ + ++P++ G + R++GC Y ++ N KL+ +S+ C+FLGY L Q +++++
Subjt: MMSFTQLSDSFWGYALEIAIYILNNVPSKSIS-KTPYELWKGCKGSLRHFRIWGCPAYVLVQ--NPKKLEHRSKLCLFLGYPKESKGGLFYDPQENKVFV
Query: STNVTF
S +V F
Subjt: STNVTF
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 3.6e-08 | 25.47 | Show/hide |
Query: MMSFTQLSDSFWGYALEIAIYILNNVPSKSIS-KTPYELWKGCKGSLRHFRIWGCPAYVLVQ--NPKKLEHRSKLCLFLGYPKESKGGLFYDPQENKVFV
++S + ++W YA +A+Y++N +P+ + ++P++ G + +++GC Y ++ N KLE +SK C F+GY L +++
Subjt: MMSFTQLSDSFWGYALEIAIYILNNVPSKSIS-KTPYELWKGCKGSLRHFRIWGCPAYVLVQ--NPKKLEHRSKLCLFLGYPKESKGGLFYDPQENKVFV
Query: STNVTF
S +V F
Subjt: STNVTF
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