; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc08g0225951 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc08g0225951
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase
Genome locationCMiso1.1chr08:17346781..17347536
RNA-Seq ExpressionCmc08g0225951
SyntenyCmc08g0225951
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001584 - Integrase, catalytic core
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR041588 - Integrase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025165.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]5.3e-10983.54Show/hide
Query:  ESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFELRTNEAIVKQGRLCVPNISELKGAILEEAHNSVYAMHLGSTKMYRTLKKTYWWP
        E SGSLLAQFQVRSSLV EIV RQ EDSNLQK   K+K+G E EFELRT+EAIVKQGRLCVPNISELK AILEEAH+S YAMH GSTKMYRTLKKTYWW 
Subjt:  ESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFELRTNEAIVKQGRLCVPNISELKGAILEEAHNSVYAMHLGSTKMYRTLKKTYWWP

Query:  GMKREIAEYVDRCLICQQVKLVRQRPGGLLNPLSVPEWKWEHITMDFLFGLPHTSRGYDGIWVIVDRLTKTAWFIPIKVMSTLDQVAKSYVNRIVSQHGV
        GMK+EIAEYVDRCLICQQVKLVRQRPGG LNPL VPEWKWEHITMDFLFGLP TS G+DGIWVIVDRLTKT  FIPIK+ STLDQ+A+ YV++IVSQ+GV
Subjt:  GMKREIAEYVDRCLICQQVKLVRQRPGGLLNPLSVPEWKWEHITMDFLFGLPHTSRGYDGIWVIVDRLTKTAWFIPIKVMSTLDQVAKSYVNRIVSQHGV

Query:  PVSIVSDRDPRFTSKFWPSVQKAMRTKLKFSTAFHPR
        PVSIVSDRDPRFTSKFWPS+QKA+ T LKFST+FHP+
Subjt:  PVSIVSDRDPRFTSKFWPSVQKAMRTKLKFSTAFHPR

KAA0051980.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]2.2e-11588.75Show/hide
Query:  MTAESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFELRTNEAIVKQGRLCVPNISELKGAILEEAHNSVYAMHLGSTKMYRTLKKTY
        MTAESS SLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFELRT+ AIVKQ  LCV NISELKGAILEEAHNS YAMH GSTKMYRTLKKTY
Subjt:  MTAESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFELRTNEAIVKQGRLCVPNISELKGAILEEAHNSVYAMHLGSTKMYRTLKKTY

Query:  WWPGMKREIAEYVDRCLICQQVKLVRQRPGGLLNPLSVPEWKWEHITMDFLFGLPHTSRGYDGIWVIVDRLTKTAWFIPIKVMSTLDQVAKSYVNRIVSQ
        WW GMKREI EYVDRCLICQQ+K VRQR GGLLNPL VPEWKWEHITMDFLFGLP TSRGYDGIWVIVDRLTKTA FIPIK  S LDQ+AK YV++IVSQ
Subjt:  WWPGMKREIAEYVDRCLICQQVKLVRQRPGGLLNPLSVPEWKWEHITMDFLFGLPHTSRGYDGIWVIVDRLTKTAWFIPIKVMSTLDQVAKSYVNRIVSQ

Query:  HGVPVSIVSDRDPRFTSKFWPSVQKAMRTKLKFSTAFHPR
        HGVPVSIVSDRDPRFTSKFWPSVQKA  TKLKFS AFHP+
Subjt:  HGVPVSIVSDRDPRFTSKFWPSVQKAMRTKLKFSTAFHPR

TYJ96573.1 retrotransposon protein, putative, Ty3-gypsy subclass [Cucumis melo var. makuwa]3.4e-11691.77Show/hide
Query:  AEIVGRQPEDSNLQKMLAKAKQGPEAEFELRTNEAIVKQGRLCVPNISELKGAILEEAHNSVYAMHLGSTKMYRTLKKTYWWPGMKREIAEYVDRCLICQ
        A ++ RQP DSNLQKMLAKAKQG EAE ELRT+ AIVKQGRLCVPNISELKGAILEEAHNSVYAMH GSTKMYRTLKKTYWW GMKREIAEYVDRCLICQ
Subjt:  AEIVGRQPEDSNLQKMLAKAKQGPEAEFELRTNEAIVKQGRLCVPNISELKGAILEEAHNSVYAMHLGSTKMYRTLKKTYWWPGMKREIAEYVDRCLICQ

Query:  QVKLVRQRPGGLLNPLSVPEWKWEHITMDFLFGLPHTSRGYDGIWVIVDRLTKTAWFIPIKVMSTLDQVAKSYVNRIVSQHGVPVSIVSDRDPRFTSKFW
        QVKLVRQRPGGLLNPL VPEWKWEHITMDFLFGLP TSRGYDGIWVIVDRLTKT  FI IKVMSTLDQVAKSYVNRIVSQHGVPVSIVSDRDPRFT KFW
Subjt:  QVKLVRQRPGGLLNPLSVPEWKWEHITMDFLFGLPHTSRGYDGIWVIVDRLTKTAWFIPIKVMSTLDQVAKSYVNRIVSQHGVPVSIVSDRDPRFTSKFW

Query:  PSVQKAMRTKLKFSTAFHPRQMVSQRGPSRP
        PSVQKAM TKLKFSTAFHPRQMVSQ GPSRP
Subjt:  PSVQKAMRTKLKFSTAFHPRQMVSQRGPSRP

TYK05031.1 reverse transcriptase [Cucumis melo var. makuwa]2.7e-11387.92Show/hide
Query:  MTAESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFELRTNEAIVKQGRLCVPNISELKGAILEEAHNSVYAMHLGSTKMYRTLKKTY
        MTAESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFELRT  AIVK GRLCVPNISELKGAILEEAHNS YAMH GSTKMYRTLKK Y
Subjt:  MTAESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFELRTNEAIVKQGRLCVPNISELKGAILEEAHNSVYAMHLGSTKMYRTLKKTY

Query:  WWPGMKREIAEYVDRCLICQQVKLVRQRPGGLLNPLSVPEWKWEHITMDFLFGLPHTSRGYDGIWVIVDRLTKTAWFIPIKVMSTLDQVAKSYVNRIVSQ
        WW GMKREIA+YVDRCLICQQVKLVRQRPGGLLNPL VP+WKWEHITMDFLFGLP TSR YDGIWVIVDRLTKT  FIPIK  STLDQ+ K YV+RIVSQ
Subjt:  WWPGMKREIAEYVDRCLICQQVKLVRQRPGGLLNPLSVPEWKWEHITMDFLFGLPHTSRGYDGIWVIVDRLTKTAWFIPIKVMSTLDQVAKSYVNRIVSQ

Query:  HGVPVSIVSDRDPRFTSKFWPSVQKAMRTKLKFSTAFHPR
        HGV VSIVS+RD RFTSKF PSVQK M TK KFS AFHP+
Subjt:  HGVPVSIVSDRDPRFTSKFWPSVQKAMRTKLKFSTAFHPR

TYK11723.1 reverse transcriptase [Cucumis melo var. makuwa]4.5e-11688.75Show/hide
Query:  MTAESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFELRTNEAIVKQGRLCVPNISELKGAILEEAHNSVYAMHLGSTKMYRTLKKTY
        MTAESSGSLLAQFQVRSSLVAE VGRQ EDSNLQKMLAKAKQGPEAEFELRTN AIVKQGRLCVPNIS+LKGAILEE HN  YAMH GSTKMYRTLK TY
Subjt:  MTAESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFELRTNEAIVKQGRLCVPNISELKGAILEEAHNSVYAMHLGSTKMYRTLKKTY

Query:  WWPGMKREIAEYVDRCLICQQVKLVRQRPGGLLNPLSVPEWKWEHITMDFLFGLPHTSRGYDGIWVIVDRLTKTAWFIPIKVMSTLDQVAKSYVNRIVSQ
        WWPGMKREIAEYVDRCLICQQVKLVRQ PGGLLNPL +PEWKWEHITMDFLFGLP TSRGYDGIWVIVDRLTKT  FIPIK  STLDQ+AK YV+RIVSQ
Subjt:  WWPGMKREIAEYVDRCLICQQVKLVRQRPGGLLNPLSVPEWKWEHITMDFLFGLPHTSRGYDGIWVIVDRLTKTAWFIPIKVMSTLDQVAKSYVNRIVSQ

Query:  HGVPVSIVSDRDPRFTSKFWPSVQKAMRTKLKFSTAFHPR
        +GVPVSIVSDRDPRFTSKF  SVQKAM TKLKFS+ FHP+
Subjt:  HGVPVSIVSDRDPRFTSKFWPSVQKAMRTKLKFSTAFHPR

TrEMBL top hitse value%identityAlignment
A0A5A7SL18 DNA/RNA polymerases superfamily protein2.6e-10983.54Show/hide
Query:  ESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFELRTNEAIVKQGRLCVPNISELKGAILEEAHNSVYAMHLGSTKMYRTLKKTYWWP
        E SGSLLAQFQVRSSLV EIV RQ EDSNLQK   K+K+G E EFELRT+EAIVKQGRLCVPNISELK AILEEAH+S YAMH GSTKMYRTLKKTYWW 
Subjt:  ESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFELRTNEAIVKQGRLCVPNISELKGAILEEAHNSVYAMHLGSTKMYRTLKKTYWWP

Query:  GMKREIAEYVDRCLICQQVKLVRQRPGGLLNPLSVPEWKWEHITMDFLFGLPHTSRGYDGIWVIVDRLTKTAWFIPIKVMSTLDQVAKSYVNRIVSQHGV
        GMK+EIAEYVDRCLICQQVKLVRQRPGG LNPL VPEWKWEHITMDFLFGLP TS G+DGIWVIVDRLTKT  FIPIK+ STLDQ+A+ YV++IVSQ+GV
Subjt:  GMKREIAEYVDRCLICQQVKLVRQRPGGLLNPLSVPEWKWEHITMDFLFGLPHTSRGYDGIWVIVDRLTKTAWFIPIKVMSTLDQVAKSYVNRIVSQHGV

Query:  PVSIVSDRDPRFTSKFWPSVQKAMRTKLKFSTAFHPR
        PVSIVSDRDPRFTSKFWPS+QKA+ T LKFST+FHP+
Subjt:  PVSIVSDRDPRFTSKFWPSVQKAMRTKLKFSTAFHPR

A0A5A7U9X4 DNA/RNA polymerases superfamily protein1.1e-11588.75Show/hide
Query:  MTAESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFELRTNEAIVKQGRLCVPNISELKGAILEEAHNSVYAMHLGSTKMYRTLKKTY
        MTAESS SLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFELRT+ AIVKQ  LCV NISELKGAILEEAHNS YAMH GSTKMYRTLKKTY
Subjt:  MTAESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFELRTNEAIVKQGRLCVPNISELKGAILEEAHNSVYAMHLGSTKMYRTLKKTY

Query:  WWPGMKREIAEYVDRCLICQQVKLVRQRPGGLLNPLSVPEWKWEHITMDFLFGLPHTSRGYDGIWVIVDRLTKTAWFIPIKVMSTLDQVAKSYVNRIVSQ
        WW GMKREI EYVDRCLICQQ+K VRQR GGLLNPL VPEWKWEHITMDFLFGLP TSRGYDGIWVIVDRLTKTA FIPIK  S LDQ+AK YV++IVSQ
Subjt:  WWPGMKREIAEYVDRCLICQQVKLVRQRPGGLLNPLSVPEWKWEHITMDFLFGLPHTSRGYDGIWVIVDRLTKTAWFIPIKVMSTLDQVAKSYVNRIVSQ

Query:  HGVPVSIVSDRDPRFTSKFWPSVQKAMRTKLKFSTAFHPR
        HGVPVSIVSDRDPRFTSKFWPSVQKA  TKLKFS AFHP+
Subjt:  HGVPVSIVSDRDPRFTSKFWPSVQKAMRTKLKFSTAFHPR

A0A5D3BB98 Retrotransposon protein, putative, Ty3-gypsy subclass1.7e-11691.77Show/hide
Query:  AEIVGRQPEDSNLQKMLAKAKQGPEAEFELRTNEAIVKQGRLCVPNISELKGAILEEAHNSVYAMHLGSTKMYRTLKKTYWWPGMKREIAEYVDRCLICQ
        A ++ RQP DSNLQKMLAKAKQG EAE ELRT+ AIVKQGRLCVPNISELKGAILEEAHNSVYAMH GSTKMYRTLKKTYWW GMKREIAEYVDRCLICQ
Subjt:  AEIVGRQPEDSNLQKMLAKAKQGPEAEFELRTNEAIVKQGRLCVPNISELKGAILEEAHNSVYAMHLGSTKMYRTLKKTYWWPGMKREIAEYVDRCLICQ

Query:  QVKLVRQRPGGLLNPLSVPEWKWEHITMDFLFGLPHTSRGYDGIWVIVDRLTKTAWFIPIKVMSTLDQVAKSYVNRIVSQHGVPVSIVSDRDPRFTSKFW
        QVKLVRQRPGGLLNPL VPEWKWEHITMDFLFGLP TSRGYDGIWVIVDRLTKT  FI IKVMSTLDQVAKSYVNRIVSQHGVPVSIVSDRDPRFT KFW
Subjt:  QVKLVRQRPGGLLNPLSVPEWKWEHITMDFLFGLPHTSRGYDGIWVIVDRLTKTAWFIPIKVMSTLDQVAKSYVNRIVSQHGVPVSIVSDRDPRFTSKFW

Query:  PSVQKAMRTKLKFSTAFHPRQMVSQRGPSRP
        PSVQKAM TKLKFSTAFHPRQMVSQ GPSRP
Subjt:  PSVQKAMRTKLKFSTAFHPRQMVSQRGPSRP

A0A5D3BZC5 Reverse transcriptase1.3e-11387.92Show/hide
Query:  MTAESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFELRTNEAIVKQGRLCVPNISELKGAILEEAHNSVYAMHLGSTKMYRTLKKTY
        MTAESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFELRT  AIVK GRLCVPNISELKGAILEEAHNS YAMH GSTKMYRTLKK Y
Subjt:  MTAESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFELRTNEAIVKQGRLCVPNISELKGAILEEAHNSVYAMHLGSTKMYRTLKKTY

Query:  WWPGMKREIAEYVDRCLICQQVKLVRQRPGGLLNPLSVPEWKWEHITMDFLFGLPHTSRGYDGIWVIVDRLTKTAWFIPIKVMSTLDQVAKSYVNRIVSQ
        WW GMKREIA+YVDRCLICQQVKLVRQRPGGLLNPL VP+WKWEHITMDFLFGLP TSR YDGIWVIVDRLTKT  FIPIK  STLDQ+ K YV+RIVSQ
Subjt:  WWPGMKREIAEYVDRCLICQQVKLVRQRPGGLLNPLSVPEWKWEHITMDFLFGLPHTSRGYDGIWVIVDRLTKTAWFIPIKVMSTLDQVAKSYVNRIVSQ

Query:  HGVPVSIVSDRDPRFTSKFWPSVQKAMRTKLKFSTAFHPR
        HGV VSIVS+RD RFTSKF PSVQK M TK KFS AFHP+
Subjt:  HGVPVSIVSDRDPRFTSKFWPSVQKAMRTKLKFSTAFHPR

A0A5D3CIH8 Reverse transcriptase2.2e-11688.75Show/hide
Query:  MTAESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFELRTNEAIVKQGRLCVPNISELKGAILEEAHNSVYAMHLGSTKMYRTLKKTY
        MTAESSGSLLAQFQVRSSLVAE VGRQ EDSNLQKMLAKAKQGPEAEFELRTN AIVKQGRLCVPNIS+LKGAILEE HN  YAMH GSTKMYRTLK TY
Subjt:  MTAESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFELRTNEAIVKQGRLCVPNISELKGAILEEAHNSVYAMHLGSTKMYRTLKKTY

Query:  WWPGMKREIAEYVDRCLICQQVKLVRQRPGGLLNPLSVPEWKWEHITMDFLFGLPHTSRGYDGIWVIVDRLTKTAWFIPIKVMSTLDQVAKSYVNRIVSQ
        WWPGMKREIAEYVDRCLICQQVKLVRQ PGGLLNPL +PEWKWEHITMDFLFGLP TSRGYDGIWVIVDRLTKT  FIPIK  STLDQ+AK YV+RIVSQ
Subjt:  WWPGMKREIAEYVDRCLICQQVKLVRQRPGGLLNPLSVPEWKWEHITMDFLFGLPHTSRGYDGIWVIVDRLTKTAWFIPIKVMSTLDQVAKSYVNRIVSQ

Query:  HGVPVSIVSDRDPRFTSKFWPSVQKAMRTKLKFSTAFHPR
        +GVPVSIVSDRDPRFTSKF  SVQKAM TKLKFS+ FHP+
Subjt:  HGVPVSIVSDRDPRFTSKFWPSVQKAMRTKLKFSTAFHPR

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein8.2e-2827.43Show/hide
Query:  ESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFELRTNEAIVKQGRLCVPNISELKGAILEEAHNSVYAMHLGSTKMYRTLKKTYWWP
        ++S + + Q  +      ++V     D+ L  +L    +  E   +L+    I  + ++ +PN ++L   I+++ H     +H G   +   + + + W 
Subjt:  ESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFELRTNEAIVKQGRLCVPNISELKGAILEEAHNSVYAMHLGSTKMYRTLKKTYWWP

Query:  GMKREIAEYVDRCLICQQVKLVRQRPGGLLNPLSVPEWKWEHITMDFLFGLPHTSRGYDGIWVIVDRLTKTAWFIPIKVMSTLDQVAKSYVNRIVSQHGV
        G++++I EYV  C  CQ  K    +P G L P+   E  WE ++MDF+  LP +S GY+ ++V+VDR +K A  +P     T +Q A+ +  R+++  G 
Subjt:  GMKREIAEYVDRCLICQQVKLVRQRPGGLLNPLSVPEWKWEHITMDFLFGLPHTSRGYDGIWVIVDRLTKTAWFIPIKVMSTLDQVAKSYVNRIVSQHGV

Query:  PVSIVSDRDPRFTSKFWPSVQKAMRTKLKFSTAFHPR
        P  I++D D  FTS+ W          +KFS  + P+
Subjt:  PVSIVSDRDPRFTSKFWPSVQKAMRTKLKFSTAFHPR

P0CT35 Transposon Tf2-2 polyprotein8.2e-2827.43Show/hide
Query:  ESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFELRTNEAIVKQGRLCVPNISELKGAILEEAHNSVYAMHLGSTKMYRTLKKTYWWP
        ++S + + Q  +      ++V     D+ L  +L    +  E   +L+    I  + ++ +PN ++L   I+++ H     +H G   +   + + + W 
Subjt:  ESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFELRTNEAIVKQGRLCVPNISELKGAILEEAHNSVYAMHLGSTKMYRTLKKTYWWP

Query:  GMKREIAEYVDRCLICQQVKLVRQRPGGLLNPLSVPEWKWEHITMDFLFGLPHTSRGYDGIWVIVDRLTKTAWFIPIKVMSTLDQVAKSYVNRIVSQHGV
        G++++I EYV  C  CQ  K    +P G L P+   E  WE ++MDF+  LP +S GY+ ++V+VDR +K A  +P     T +Q A+ +  R+++  G 
Subjt:  GMKREIAEYVDRCLICQQVKLVRQRPGGLLNPLSVPEWKWEHITMDFLFGLPHTSRGYDGIWVIVDRLTKTAWFIPIKVMSTLDQVAKSYVNRIVSQHGV

Query:  PVSIVSDRDPRFTSKFWPSVQKAMRTKLKFSTAFHPR
        P  I++D D  FTS+ W          +KFS  + P+
Subjt:  PVSIVSDRDPRFTSKFWPSVQKAMRTKLKFSTAFHPR

P0CT36 Transposon Tf2-3 polyprotein8.2e-2827.43Show/hide
Query:  ESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFELRTNEAIVKQGRLCVPNISELKGAILEEAHNSVYAMHLGSTKMYRTLKKTYWWP
        ++S + + Q  +      ++V     D+ L  +L    +  E   +L+    I  + ++ +PN ++L   I+++ H     +H G   +   + + + W 
Subjt:  ESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFELRTNEAIVKQGRLCVPNISELKGAILEEAHNSVYAMHLGSTKMYRTLKKTYWWP

Query:  GMKREIAEYVDRCLICQQVKLVRQRPGGLLNPLSVPEWKWEHITMDFLFGLPHTSRGYDGIWVIVDRLTKTAWFIPIKVMSTLDQVAKSYVNRIVSQHGV
        G++++I EYV  C  CQ  K    +P G L P+   E  WE ++MDF+  LP +S GY+ ++V+VDR +K A  +P     T +Q A+ +  R+++  G 
Subjt:  GMKREIAEYVDRCLICQQVKLVRQRPGGLLNPLSVPEWKWEHITMDFLFGLPHTSRGYDGIWVIVDRLTKTAWFIPIKVMSTLDQVAKSYVNRIVSQHGV

Query:  PVSIVSDRDPRFTSKFWPSVQKAMRTKLKFSTAFHPR
        P  I++D D  FTS+ W          +KFS  + P+
Subjt:  PVSIVSDRDPRFTSKFWPSVQKAMRTKLKFSTAFHPR

P0CT41 Transposon Tf2-12 polyprotein8.2e-2827.43Show/hide
Query:  ESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFELRTNEAIVKQGRLCVPNISELKGAILEEAHNSVYAMHLGSTKMYRTLKKTYWWP
        ++S + + Q  +      ++V     D+ L  +L    +  E   +L+    I  + ++ +PN ++L   I+++ H     +H G   +   + + + W 
Subjt:  ESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFELRTNEAIVKQGRLCVPNISELKGAILEEAHNSVYAMHLGSTKMYRTLKKTYWWP

Query:  GMKREIAEYVDRCLICQQVKLVRQRPGGLLNPLSVPEWKWEHITMDFLFGLPHTSRGYDGIWVIVDRLTKTAWFIPIKVMSTLDQVAKSYVNRIVSQHGV
        G++++I EYV  C  CQ  K    +P G L P+   E  WE ++MDF+  LP +S GY+ ++V+VDR +K A  +P     T +Q A+ +  R+++  G 
Subjt:  GMKREIAEYVDRCLICQQVKLVRQRPGGLLNPLSVPEWKWEHITMDFLFGLPHTSRGYDGIWVIVDRLTKTAWFIPIKVMSTLDQVAKSYVNRIVSQHGV

Query:  PVSIVSDRDPRFTSKFWPSVQKAMRTKLKFSTAFHPR
        P  I++D D  FTS+ W          +KFS  + P+
Subjt:  PVSIVSDRDPRFTSKFWPSVQKAMRTKLKFSTAFHPR

Q9UR07 Transposon Tf2-11 polyprotein8.2e-2827.43Show/hide
Query:  ESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFELRTNEAIVKQGRLCVPNISELKGAILEEAHNSVYAMHLGSTKMYRTLKKTYWWP
        ++S + + Q  +      ++V     D+ L  +L    +  E   +L+    I  + ++ +PN ++L   I+++ H     +H G   +   + + + W 
Subjt:  ESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFELRTNEAIVKQGRLCVPNISELKGAILEEAHNSVYAMHLGSTKMYRTLKKTYWWP

Query:  GMKREIAEYVDRCLICQQVKLVRQRPGGLLNPLSVPEWKWEHITMDFLFGLPHTSRGYDGIWVIVDRLTKTAWFIPIKVMSTLDQVAKSYVNRIVSQHGV
        G++++I EYV  C  CQ  K    +P G L P+   E  WE ++MDF+  LP +S GY+ ++V+VDR +K A  +P     T +Q A+ +  R+++  G 
Subjt:  GMKREIAEYVDRCLICQQVKLVRQRPGGLLNPLSVPEWKWEHITMDFLFGLPHTSRGYDGIWVIVDRLTKTAWFIPIKVMSTLDQVAKSYVNRIVSQHGV

Query:  PVSIVSDRDPRFTSKFWPSVQKAMRTKLKFSTAFHPR
        P  I++D D  FTS+ W          +KFS  + P+
Subjt:  PVSIVSDRDPRFTSKFWPSVQKAMRTKLKFSTAFHPR

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTGCAGAAAGCTCAGGAAGTCTTTTAGCTCAATTTCAGGTTAGGTCTTCCTTAGTAGCAGAGATTGTAGGAAGACAGCCAGAGGATAGTAATTTGCAAAAGATGCT
TGCAAAGGCCAAGCAAGGCCCAGAGGCAGAATTTGAGTTGAGAACGAACGAAGCCATAGTTAAGCAGGGAAGACTATGCGTTCCAAATATTAGTGAGCTTAAGGGTGCTA
TACTAGAAGAAGCTCACAATTCAGTTTACGCTATGCATCTAGGAAGCACCAAGATGTATAGAACACTGAAGAAGACTTATTGGTGGCCTGGTATGAAACGAGAGATAGCT
GAATATGTCGATAGATGTTTGATCTGTCAACAGGTTAAACTAGTGAGGCAAAGGCCAGGAGGACTCCTTAATCCCCTGTCAGTGCCAGAGTGGAAGTGGGAGCATATTAC
CATGGATTTTCTGTTTGGATTACCCCATACATCTAGAGGATATGATGGTATATGGGTAATAGTAGATAGACTCACCAAGACAGCGTGGTTTATACCGATTAAAGTGATGT
CTACACTAGATCAGGTAGCTAAGTCGTACGTCAACAGGATTGTGAGTCAACATGGAGTGCCAGTGTCCATAGTTTCAGATAGGGACCCGAGGTTTACTTCTAAGTTTTGG
CCTAGTGTGCAAAAAGCAATGAGAACAAAGTTGAAGTTCAGTACTGCGTTCCATCCCAGACAGATGGTCAGTCAGAGAGGACCATCCAGACCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGACTGCAGAAAGCTCAGGAAGTCTTTTAGCTCAATTTCAGGTTAGGTCTTCCTTAGTAGCAGAGATTGTAGGAAGACAGCCAGAGGATAGTAATTTGCAAAAGATGCT
TGCAAAGGCCAAGCAAGGCCCAGAGGCAGAATTTGAGTTGAGAACGAACGAAGCCATAGTTAAGCAGGGAAGACTATGCGTTCCAAATATTAGTGAGCTTAAGGGTGCTA
TACTAGAAGAAGCTCACAATTCAGTTTACGCTATGCATCTAGGAAGCACCAAGATGTATAGAACACTGAAGAAGACTTATTGGTGGCCTGGTATGAAACGAGAGATAGCT
GAATATGTCGATAGATGTTTGATCTGTCAACAGGTTAAACTAGTGAGGCAAAGGCCAGGAGGACTCCTTAATCCCCTGTCAGTGCCAGAGTGGAAGTGGGAGCATATTAC
CATGGATTTTCTGTTTGGATTACCCCATACATCTAGAGGATATGATGGTATATGGGTAATAGTAGATAGACTCACCAAGACAGCGTGGTTTATACCGATTAAAGTGATGT
CTACACTAGATCAGGTAGCTAAGTCGTACGTCAACAGGATTGTGAGTCAACATGGAGTGCCAGTGTCCATAGTTTCAGATAGGGACCCGAGGTTTACTTCTAAGTTTTGG
CCTAGTGTGCAAAAAGCAATGAGAACAAAGTTGAAGTTCAGTACTGCGTTCCATCCCAGACAGATGGTCAGTCAGAGAGGACCATCCAGACCTTAG
Protein sequenceShow/hide protein sequence
MTAESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFELRTNEAIVKQGRLCVPNISELKGAILEEAHNSVYAMHLGSTKMYRTLKKTYWWPGMKREIA
EYVDRCLICQQVKLVRQRPGGLLNPLSVPEWKWEHITMDFLFGLPHTSRGYDGIWVIVDRLTKTAWFIPIKVMSTLDQVAKSYVNRIVSQHGVPVSIVSDRDPRFTSKFW
PSVQKAMRTKLKFSTAFHPRQMVSQRGPSRP