| GenBank top hits | e value | %identity | Alignment |
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| KAA0031895.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 3.1e-111 | 88.89 | Show/hide |
Query: MRLCIDYRELNKVTVKNKYPLPWIDDLFDQLQGATMFSKIDLRSRYHQLRIKDSNVPNTAFRSRYGHYEFIVMSFGLMNASTVFMDLMNRVFREFLDTFV
MRLCIDYRELNKVTVKN+YPLP IDDLFDQLQGAT+FSKIDLRS YHQLRIKD +VP TAFRSRYGHYEFIVMSFGL NA VFMDLMNRVFREFLDTF
Subjt: MRLCIDYRELNKVTVKNKYPLPWIDDLFDQLQGATMFSKIDLRSRYHQLRIKDSNVPNTAFRSRYGHYEFIVMSFGLMNASTVFMDLMNRVFREFLDTFV
Query: IVSFLGHVVSKAGVFMDPAKIEEVTSWPRSSTVSEVRSFLCLAGYYRRFVENFSRIPTPFTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPYGSG
VSFLGHVVSKAGV +DPAKIE VT W R STVSEVRSFL LAGYYRRFV NFSRI TP TQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVP GSG
Subjt: IVSFLGHVVSKAGVFMDPAKIEEVTSWPRSSTVSEVRSFLCLAGYYRRFVENFSRIPTPFTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPYGSG
Query: SFVIYSHASKNGLGCVLMQQGKVVPYASRQLKSH
SFVIYS ASK GLGCVLMQQGKVV YASRQLKSH
Subjt: SFVIYSHASKNGLGCVLMQQGKVVPYASRQLKSH
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| KAA0032794.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 7.6e-110 | 81.64 | Show/hide |
Query: MRLCIDYRELNKVTVKNKYPLPWIDDLFDQLQGATMFSKIDLRSRYHQLRIKDSNVPNTAFRSRYGHYEFIVMSFGLMNASTVFMDLMNRVFREFLDTFV
MRLCIDYRELNKVTVKN+YPLP IDDLFDQLQGAT+FSKIDLRS YHQLRIKD +VP TAFRSRYGHYEFIVMSFGL NA TVFMDLMNRVFREFLDTFV
Subjt: MRLCIDYRELNKVTVKNKYPLPWIDDLFDQLQGATMFSKIDLRSRYHQLRIKDSNVPNTAFRSRYGHYEFIVMSFGLMNASTVFMDLMNRVFREFLDTFV
Query: I----------------------VSFLGHVVSKAGVFMDPAKIEEVTSWPRSSTVSEVRSFLCLAGYYRRFVENFSRIPTPFTQLTRKGAPFVWSKACED
I VSFLGHVVSKAGV +DPAKIE VTSWPR STVSEVRSFL L GYYRRFVENFSRI TP TQLTRKGAPFVWSKACED
Subjt: I----------------------VSFLGHVVSKAGVFMDPAKIEEVTSWPRSSTVSEVRSFLCLAGYYRRFVENFSRIPTPFTQLTRKGAPFVWSKACED
Query: SFQNLKQKLVTAPVLTVPYGSGSFVIYSHASKNGLGCVLMQQGKVVPYASRQLKSH
SFQNLK+KLVTAPV TVP GSGSF+IY ASK GLGCVLMQQGKVV YASRQLKSH
Subjt: SFQNLKQKLVTAPVLTVPYGSGSFVIYSHASKNGLGCVLMQQGKVVPYASRQLKSH
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| KAA0036553.1 pol protein [Cucumis melo var. makuwa] | 4.5e-110 | 81.64 | Show/hide |
Query: MRLCIDYRELNKVTVKNKYPLPWIDDLFDQLQGATMFSKIDLRSRYHQLRIKDSNVPNTAFRSRYGHYEFIVMSFGLMNASTVFMDLMNRVFREFLDTFV
MRLCIDYRELNKVTVKN+YPLPWIDDLFDQLQ AT+FSKIDLRS YHQLRIKD +VP TAFRSRYGHYEFIVMSFGL NA VFMDLMNRVFREFLDTFV
Subjt: MRLCIDYRELNKVTVKNKYPLPWIDDLFDQLQGATMFSKIDLRSRYHQLRIKDSNVPNTAFRSRYGHYEFIVMSFGLMNASTVFMDLMNRVFREFLDTFV
Query: ----------------------IVSFLGHVVSKAGVFMDPAKIEEVTSWPRSSTVSEVRSFLCLAGYYRRFVENFSRIPTPFTQLTRKGAPFVWSKACED
IVSFLGHVVSKAGV +DPAKIE VT W R STVSE RSFL LAGYYRRFVENFS I TP TQLTRKGAPFVWSKACED
Subjt: ----------------------IVSFLGHVVSKAGVFMDPAKIEEVTSWPRSSTVSEVRSFLCLAGYYRRFVENFSRIPTPFTQLTRKGAPFVWSKACED
Query: SFQNLKQKLVTAPVLTVPYGSGSFVIYSHASKNGLGCVLMQQGKVVPYASRQLKSH
SFQNLKQKLVTAPVLTVP GSGSFVIYS ASK GLGCVLMQQGKVV YASRQLKSH
Subjt: SFQNLKQKLVTAPVLTVPYGSGSFVIYSHASKNGLGCVLMQQGKVVPYASRQLKSH
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| KAA0051368.1 pol protein [Cucumis melo var. makuwa] | 6.5e-109 | 81.25 | Show/hide |
Query: MRLCIDYRELNKVTVKNKYPLPWIDDLFDQLQGATMFSKIDLRSRYHQLRIKDSNVPNTAFRSRYGHYEFIVMSFGLMNASTVFMDLMNRVFREFLDTFV
MRLCIDYRELNKVTVKN+YPLP IDDLFDQLQGA +FSK DLRS YHQLRIKD +VP TAFRSRYGHYEFIVMSFGL NA VFMDLMNRVFR+FLDTFV
Subjt: MRLCIDYRELNKVTVKNKYPLPWIDDLFDQLQGATMFSKIDLRSRYHQLRIKDSNVPNTAFRSRYGHYEFIVMSFGLMNASTVFMDLMNRVFREFLDTFV
Query: I----------------------VSFLGHVVSKAGVFMDPAKIEEVTSWPRSSTVSEVRSFLCLAGYYRRFVENFSRIPTPFTQLTRKGAPFVWSKACED
I VSFLGHVVSKAGV +DPAKIE VT W R STVSEVRSFL LAGYYRRFVENFSRI TP TQLTRKGAPFVWSKACED
Subjt: I----------------------VSFLGHVVSKAGVFMDPAKIEEVTSWPRSSTVSEVRSFLCLAGYYRRFVENFSRIPTPFTQLTRKGAPFVWSKACED
Query: SFQNLKQKLVTAPVLTVPYGSGSFVIYSHASKNGLGCVLMQQGKVVPYASRQLKSH
SFQNLKQKLVTAPVLTVP GSGSFVIYS ASK GLGCVLMQQGKVV YASRQLKSH
Subjt: SFQNLKQKLVTAPVLTVPYGSGSFVIYSHASKNGLGCVLMQQGKVVPYASRQLKSH
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| TYK21025.1 pol protein [Cucumis melo var. makuwa] | 7.6e-110 | 82.03 | Show/hide |
Query: MRLCIDYRELNKVTVKNKYPLPWIDDLFDQLQGATMFSKIDLRSRYHQLRIKDSNVPNTAFRSRYGHYEFIVMSFGLMNASTVFMDLMNRVFREFLDTFV
MRLCIDYRELNKVTVKNKYPLP IDDLFD LQGAT+FSKIDLRSRYHQLRIKD +VP AFRSRYGHYEFIVMSFGL NA TVFMDLMNRVFREFLDTFV
Subjt: MRLCIDYRELNKVTVKNKYPLPWIDDLFDQLQGATMFSKIDLRSRYHQLRIKDSNVPNTAFRSRYGHYEFIVMSFGLMNASTVFMDLMNRVFREFLDTFV
Query: I----------------------VSFLGHVVSKAGVFMDPAKIEEVTSWPRSSTVSEVRSFLCLAGYYRRFVENFSRIPTPFTQLTRKGAPFVWSKACED
I VSFLGHVVSKAGV +DPAKI+ VTSWPR STVSEVRSFL LAGYYRRFVENFSRI TP TQLTRK APFVWSK CED
Subjt: I----------------------VSFLGHVVSKAGVFMDPAKIEEVTSWPRSSTVSEVRSFLCLAGYYRRFVENFSRIPTPFTQLTRKGAPFVWSKACED
Query: SFQNLKQKLVTAPVLTVPYGSGSFVIYSHASKNGLGCVLMQQGKVVPYASRQLKSH
SFQNLKQKLVTAPVLTVP GSGSFVIYS+ASK GLGCVLMQQ KVV YASRQLKSH
Subjt: SFQNLKQKLVTAPVLTVPYGSGSFVIYSHASKNGLGCVLMQQGKVVPYASRQLKSH
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SRV9 Reverse transcriptase | 1.5e-111 | 88.89 | Show/hide |
Query: MRLCIDYRELNKVTVKNKYPLPWIDDLFDQLQGATMFSKIDLRSRYHQLRIKDSNVPNTAFRSRYGHYEFIVMSFGLMNASTVFMDLMNRVFREFLDTFV
MRLCIDYRELNKVTVKN+YPLP IDDLFDQLQGAT+FSKIDLRS YHQLRIKD +VP TAFRSRYGHYEFIVMSFGL NA VFMDLMNRVFREFLDTF
Subjt: MRLCIDYRELNKVTVKNKYPLPWIDDLFDQLQGATMFSKIDLRSRYHQLRIKDSNVPNTAFRSRYGHYEFIVMSFGLMNASTVFMDLMNRVFREFLDTFV
Query: IVSFLGHVVSKAGVFMDPAKIEEVTSWPRSSTVSEVRSFLCLAGYYRRFVENFSRIPTPFTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPYGSG
VSFLGHVVSKAGV +DPAKIE VT W R STVSEVRSFL LAGYYRRFV NFSRI TP TQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVP GSG
Subjt: IVSFLGHVVSKAGVFMDPAKIEEVTSWPRSSTVSEVRSFLCLAGYYRRFVENFSRIPTPFTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPYGSG
Query: SFVIYSHASKNGLGCVLMQQGKVVPYASRQLKSH
SFVIYS ASK GLGCVLMQQGKVV YASRQLKSH
Subjt: SFVIYSHASKNGLGCVLMQQGKVVPYASRQLKSH
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| A0A5A7T0Y9 Reverse transcriptase | 2.2e-110 | 81.64 | Show/hide |
Query: MRLCIDYRELNKVTVKNKYPLPWIDDLFDQLQGATMFSKIDLRSRYHQLRIKDSNVPNTAFRSRYGHYEFIVMSFGLMNASTVFMDLMNRVFREFLDTFV
MRLCIDYRELNKVTVKN+YPLPWIDDLFDQLQ AT+FSKIDLRS YHQLRIKD +VP TAFRSRYGHYEFIVMSFGL NA VFMDLMNRVFREFLDTFV
Subjt: MRLCIDYRELNKVTVKNKYPLPWIDDLFDQLQGATMFSKIDLRSRYHQLRIKDSNVPNTAFRSRYGHYEFIVMSFGLMNASTVFMDLMNRVFREFLDTFV
Query: ----------------------IVSFLGHVVSKAGVFMDPAKIEEVTSWPRSSTVSEVRSFLCLAGYYRRFVENFSRIPTPFTQLTRKGAPFVWSKACED
IVSFLGHVVSKAGV +DPAKIE VT W R STVSE RSFL LAGYYRRFVENFS I TP TQLTRKGAPFVWSKACED
Subjt: ----------------------IVSFLGHVVSKAGVFMDPAKIEEVTSWPRSSTVSEVRSFLCLAGYYRRFVENFSRIPTPFTQLTRKGAPFVWSKACED
Query: SFQNLKQKLVTAPVLTVPYGSGSFVIYSHASKNGLGCVLMQQGKVVPYASRQLKSH
SFQNLKQKLVTAPVLTVP GSGSFVIYS ASK GLGCVLMQQGKVV YASRQLKSH
Subjt: SFQNLKQKLVTAPVLTVPYGSGSFVIYSHASKNGLGCVLMQQGKVVPYASRQLKSH
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| A0A5A7U7V9 Reverse transcriptase | 3.1e-109 | 81.25 | Show/hide |
Query: MRLCIDYRELNKVTVKNKYPLPWIDDLFDQLQGATMFSKIDLRSRYHQLRIKDSNVPNTAFRSRYGHYEFIVMSFGLMNASTVFMDLMNRVFREFLDTFV
MRLCIDYRELNKVTVKN+YPLP IDDLFDQLQGA +FSK DLRS YHQLRIKD +VP TAFRSRYGHYEFIVMSFGL NA VFMDLMNRVFR+FLDTFV
Subjt: MRLCIDYRELNKVTVKNKYPLPWIDDLFDQLQGATMFSKIDLRSRYHQLRIKDSNVPNTAFRSRYGHYEFIVMSFGLMNASTVFMDLMNRVFREFLDTFV
Query: I----------------------VSFLGHVVSKAGVFMDPAKIEEVTSWPRSSTVSEVRSFLCLAGYYRRFVENFSRIPTPFTQLTRKGAPFVWSKACED
I VSFLGHVVSKAGV +DPAKIE VT W R STVSEVRSFL LAGYYRRFVENFSRI TP TQLTRKGAPFVWSKACED
Subjt: I----------------------VSFLGHVVSKAGVFMDPAKIEEVTSWPRSSTVSEVRSFLCLAGYYRRFVENFSRIPTPFTQLTRKGAPFVWSKACED
Query: SFQNLKQKLVTAPVLTVPYGSGSFVIYSHASKNGLGCVLMQQGKVVPYASRQLKSH
SFQNLKQKLVTAPVLTVP GSGSFVIYS ASK GLGCVLMQQGKVV YASRQLKSH
Subjt: SFQNLKQKLVTAPVLTVPYGSGSFVIYSHASKNGLGCVLMQQGKVVPYASRQLKSH
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| A0A5D3DBS9 Pol protein | 3.7e-110 | 82.03 | Show/hide |
Query: MRLCIDYRELNKVTVKNKYPLPWIDDLFDQLQGATMFSKIDLRSRYHQLRIKDSNVPNTAFRSRYGHYEFIVMSFGLMNASTVFMDLMNRVFREFLDTFV
MRLCIDYRELNKVTVKNKYPLP IDDLFD LQGAT+FSKIDLRSRYHQLRIKD +VP AFRSRYGHYEFIVMSFGL NA TVFMDLMNRVFREFLDTFV
Subjt: MRLCIDYRELNKVTVKNKYPLPWIDDLFDQLQGATMFSKIDLRSRYHQLRIKDSNVPNTAFRSRYGHYEFIVMSFGLMNASTVFMDLMNRVFREFLDTFV
Query: I----------------------VSFLGHVVSKAGVFMDPAKIEEVTSWPRSSTVSEVRSFLCLAGYYRRFVENFSRIPTPFTQLTRKGAPFVWSKACED
I VSFLGHVVSKAGV +DPAKI+ VTSWPR STVSEVRSFL LAGYYRRFVENFSRI TP TQLTRK APFVWSK CED
Subjt: I----------------------VSFLGHVVSKAGVFMDPAKIEEVTSWPRSSTVSEVRSFLCLAGYYRRFVENFSRIPTPFTQLTRKGAPFVWSKACED
Query: SFQNLKQKLVTAPVLTVPYGSGSFVIYSHASKNGLGCVLMQQGKVVPYASRQLKSH
SFQNLKQKLVTAPVLTVP GSGSFVIYS+ASK GLGCVLMQQ KVV YASRQLKSH
Subjt: SFQNLKQKLVTAPVLTVPYGSGSFVIYSHASKNGLGCVLMQQGKVVPYASRQLKSH
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| A0A5D3E456 Reverse transcriptase | 3.7e-110 | 81.64 | Show/hide |
Query: MRLCIDYRELNKVTVKNKYPLPWIDDLFDQLQGATMFSKIDLRSRYHQLRIKDSNVPNTAFRSRYGHYEFIVMSFGLMNASTVFMDLMNRVFREFLDTFV
MRLCIDYRELNKVTVKN+YPLP IDDLFDQLQGAT+FSKIDLRS YHQLRIKD +VP TAFRSRYGHYEFIVMSFGL NA TVFMDLMNRVFREFLDTFV
Subjt: MRLCIDYRELNKVTVKNKYPLPWIDDLFDQLQGATMFSKIDLRSRYHQLRIKDSNVPNTAFRSRYGHYEFIVMSFGLMNASTVFMDLMNRVFREFLDTFV
Query: I----------------------VSFLGHVVSKAGVFMDPAKIEEVTSWPRSSTVSEVRSFLCLAGYYRRFVENFSRIPTPFTQLTRKGAPFVWSKACED
I VSFLGHVVSKAGV +DPAKIE VTSWPR STVSEVRSFL L GYYRRFVENFSRI TP TQLTRKGAPFVWSKACED
Subjt: I----------------------VSFLGHVVSKAGVFMDPAKIEEVTSWPRSSTVSEVRSFLCLAGYYRRFVENFSRIPTPFTQLTRKGAPFVWSKACED
Query: SFQNLKQKLVTAPVLTVPYGSGSFVIYSHASKNGLGCVLMQQGKVVPYASRQLKSH
SFQNLK+KLVTAPV TVP GSGSF+IY ASK GLGCVLMQQGKVV YASRQLKSH
Subjt: SFQNLKQKLVTAPVLTVPYGSGSFVIYSHASKNGLGCVLMQQGKVVPYASRQLKSH
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04323 Retrovirus-related Pol polyprotein from transposon 17.6 | 5.3e-37 | 31.9 | Show/hide |
Query: RLCIDYRELNKVTVKNKYPLPWIDDLFDQLQGATMFSKIDLRSRYHQLRIKDSNVPNTAFRSRYGHYEFIVMSFGLMNASTVFMDLMNRVFRE-------
R+ IDYR+LN++TV +++P+P +D++ +L F+ IDL +HQ+ + +V TAF +++GHYE++ M FGL NA F MN + R
Subjt: RLCIDYRELNKVTVKNKYPLPWIDDLFDQLQGATMFSKIDLRSRYHQLRIKDSNVPNTAFRSRYGHYEFIVMSFGLMNASTVFMDLMNRVFRE-------
Query: -FLDTFVIVS-------------------------------------FLGHVVSKAGVFMDPAKIEEVTSWPRSSTVSEVRSFLCLAGYYRRFVENFSRI
+LD ++ S FLGHV++ G+ +P KIE + +P + E+++FL L GYYR+F+ NF+ I
Subjt: -FLDTFVIVS-------------------------------------FLGHVVSKAGVFMDPAKIEEVTSWPRSSTVSEVRSFLCLAGYYRRFVENFSRI
Query: PTPFTQLTRKGAPFVWSKACEDS-FQNLKQKLVTAPVLTVPYGSGSFVIYSHASKNGLGCVLMQQGKVVPYASRQLKSH
P T+ +K + DS F+ LK + P+L VP + F + + AS LG VL Q G + Y SR L H
Subjt: PTPFTQLTRKGAPFVWSKACEDS-FQNLKQKLVTAPVLTVPYGSGSFVIYSHASKNGLGCVLMQQGKVVPYASRQLKSH
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| P10394 Retrovirus-related Pol polyprotein from transposon 412 | 1.7e-32 | 31.05 | Show/hide |
Query: RLCIDYRELNKVTVKNKYPLPWIDDLFDQLQGATMFSKIDLRSRYHQLRIKDSNVPNTAFRSRYGHYEFIVMSFGLMNASTVFMDLMNRVFRE-------
RL IDYR++NK + +K+PLP IDD+ DQL A FS +DL S +HQ+ + + + T+F + G Y F + FGL A F +M F
Subjt: RLCIDYRELNKVTVKNKYPLPWIDDLFDQLQGATMFSKIDLRSRYHQLRIKDSNVPNTAFRSRYGHYEFIVMSFGLMNASTVFMDLMNRVFRE-------
Query: -FLDTFVI-------------------------------------VSFLGHVVSKAGVFMDPAKIEEVTSWPRSSTVSEVRSFLCLAGYYRRFVENFSRI
++D ++ V+FLGH + G+ D K + + ++P R F+ YYRRF++NF+
Subjt: -FLDTFVI-------------------------------------VSFLGHVVSKAGVFMDPAKIEEVTSWPRSSTVSEVRSFLCLAGYYRRFVENFSRI
Query: PTPFTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPYGSGSFVIYSHASKNGLGCVLMQ--QGKVVP--YASR
T+L +K PF W+ C+ +F +LK +L+ +L P S F I + ASK G VL Q G +P YASR
Subjt: PTPFTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPYGSGSFVIYSHASKNGLGCVLMQ--QGKVVP--YASR
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| P10401 Retrovirus-related Pol polyprotein from transposon gypsy | 1.1e-31 | 30.56 | Show/hide |
Query: RLCIDYRELNKVTVKNKYPLPWIDDLFDQLQGATMFSKIDLRSRYHQLRIKDSNVPNTAFRSRYGHYEFIVMSFGLMNASTVFMDLMNRVFRE-------
RL ID+R+LN+ T+ ++YP+P I + L A F+ +DL+S YHQ+ + + + T+F G YEF + FGL NAS++F ++ V RE
Subjt: RLCIDYRELNKVTVKNKYPLPWIDDLFDQLQGATMFSKIDLRSRYHQLRIKDSNVPNTAFRSRYGHYEFIVMSFGLMNASTVFMDLMNRVFRE-------
Query: -FLDTFVI-------------------------------------VSFLGHVVSKAGVFMDPAKIEEVTSWPRSSTVSEVRSFLCLAGYYRRFVENFSRI
++D +I V +LG +VSK G DP K++ + +P V +VRSFL LA YYR F+++F+ I
Subjt: -FLDTFVI-------------------------------------VSFLGHVVSKAGVFMDPAKIEEVTSWPRSSTVSEVRSFLCLAGYYRRFVENFSRI
Query: PTPFTQLTR-----------KGAPFVWSKACEDSFQNLKQKLVTAPV-LTVPYGSGSFVIYSHASKNGLGCVLMQQGKVVPYASRQLK
P T + + K P +++ ++FQ L+ L + V L P F + + AS +G+G VL Q+G+ + SR LK
Subjt: PTPFTQLTR-----------KGAPFVWSKACEDSFQNLKQKLVTAPV-LTVPYGSGSFVIYSHASKNGLGCVLMQQGKVVPYASRQLK
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| P20825 Retrovirus-related Pol polyprotein from transposon 297 | 1.1e-37 | 30.82 | Show/hide |
Query: RLCIDYRELNKVTVKNKYPLPWIDDLFDQLQGATMFSKIDLRSRYHQLRIKDSNVPNTAFRSRYGHYEFIVMSFGLMNASTVFMDLMNRVFRE-------
R+ IDYR+LN++T+ ++YP+P +D++ +L F+ IDL +HQ+ + + ++ TAF ++ GHYE++ M FGL NA F MN + R
Subjt: RLCIDYRELNKVTVKNKYPLPWIDDLFDQLQGATMFSKIDLRSRYHQLRIKDSNVPNTAFRSRYGHYEFIVMSFGLMNASTVFMDLMNRVFRE-------
Query: -FLDTFVIVS-------------------------------------FLGHVVSKAGVFMDPAKIEEVTSWPRSSTVSEVRSFLCLAGYYRRFVENFSRI
+LD +I S FLGH+V+ G+ +P K++ + S+P + E+R+FL L GYYR+F+ N++ I
Subjt: -FLDTFVIVS-------------------------------------FLGHVVSKAGVFMDPAKIEEVTSWPRSSTVSEVRSFLCLAGYYRRFVENFSRI
Query: PTPFTQLTRKGAPFVWSK-ACEDSFQNLKQKLVTAPVLTVPYGSGSFVIYSHASKNGLGCVLMQQGKVVPYASRQLKSH
P T +K K ++F+ LK ++ P+L +P FV+ + AS LG VL Q G + + SR L H
Subjt: PTPFTQLTRKGAPFVWSK-ACEDSFQNLKQKLVTAPVLTVPYGSGSFVIYSHASKNGLGCVLMQQGKVVPYASRQLKSH
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| Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus | 5.1e-32 | 28.28 | Show/hide |
Query: RLCIDYRELNKVTVKNKYPLPWIDDLFDQLQGATMFSKIDLRSRYHQLRIKDSNVPNTAFRSRYGHYEFIVMSFGLMNASTVFMDLMNRVFRE-------
R+ +D++ LN VT+ + YP+P I+ L A F+ +DL S +HQ+ +K+S++P TAF + G YEF+ + FGL NA +F +++ + RE
Subjt: RLCIDYRELNKVTVKNKYPLPWIDDLFDQLQGATMFSKIDLRSRYHQLRIKDSNVPNTAFRSRYGHYEFIVMSFGLMNASTVFMDLMNRVFRE-------
Query: -FLDTFVI-------------------------------------VSFLGHVVSKAGVFMDPAKIEEVTSWPRSSTVSEVRSFLCLAGYYRRFVENFSRI
++D ++ V FLG++V+ G+ DP K+ ++ P ++V E++ FL + YYR+F+++++++
Subjt: -FLDTFVI-------------------------------------VSFLGHVVSKAGVFMDPAKIEEVTSWPRSSTVSEVRSFLCLAGYYRRFVENFSRI
Query: PTPFTQLTR-----------KGAPFVWSKACEDSFQNLKQKLVTAPVLTVPYGSGSFVIYSHASKNGLGCVLMQ--QGKVVP--YASRQL
P T LTR P + SF +LK L ++ +L P + F + + AS +G VL Q QG+ P Y SR L
Subjt: PTPFTQLTR-----------KGAPFVWSKACEDSFQNLKQKLVTAPVLTVPYGSGSFVIYSHASKNGLGCVLMQ--QGKVVP--YASRQL
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