; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc08g0226081 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc08g0226081
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase
Genome locationCMiso1.1chr08:17656127..17656795
RNA-Seq ExpressionCmc08g0226081
SyntenyCmc08g0226081
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0043227 - membrane-bounded organelle (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001584 - Integrase, catalytic core
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR041588 - Integrase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025425.1 pol protein [Cucumis melo var. makuwa]4.7e-12596.85Show/hide
Query:  MHPGSTKMYHDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPKTLRGFTVIWVVVERLTKSAHFVPGKSTY
        MHPGSTKMY DLKRVYWWRNMKREVAEFVS+CLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLP+TLRGFTVIWVVV+RLTKSAHFVPGKSTY
Subjt:  MHPGSTKMYHDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPKTLRGFTVIWVVVERLTKSAHFVPGKSTY

Query:  TASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFRKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSYLHLMEFAYNNSYQA
        TASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF KGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDS+LHLMEFAYNNSYQA
Subjt:  TASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFRKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSYLHLMEFAYNNSYQA

Query:  TIGMAPFEALYGKCCRSSVCWG
        TIGMAPFEALYGKCCRS VCWG
Subjt:  TIGMAPFEALYGKCCRSSVCWG

KAA0035938.1 pol protein [Cucumis melo var. makuwa]1.0e-12496.4Show/hide
Query:  MHPGSTKMYHDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPKTLRGFTVIWVVVERLTKSAHFVPGKSTY
        MHPGSTKMY DLKRVYWWRNMKREVAEFVS+CLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLP+TLRGFTVIWVVV+RLTKSAHFVPGKSTY
Subjt:  MHPGSTKMYHDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPKTLRGFTVIWVVVERLTKSAHFVPGKSTY

Query:  TASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFRKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSYLHLMEFAYNNSYQA
        TASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF KGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWD++LHLMEFAYNNSYQA
Subjt:  TASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFRKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSYLHLMEFAYNNSYQA

Query:  TIGMAPFEALYGKCCRSSVCWG
        TIGMAPFEALYGKCCRS VCWG
Subjt:  TIGMAPFEALYGKCCRSSVCWG

KAA0047043.1 pol protein [Cucumis melo var. makuwa]2.1e-12597.3Show/hide
Query:  MHPGSTKMYHDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPKTLRGFTVIWVVVERLTKSAHFVPGKSTY
        MHPGSTKMY DLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLP+TLRGFTVIWVVV+RLTKSAHFVPGKSTY
Subjt:  MHPGSTKMYHDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPKTLRGFTVIWVVVERLTKSAHFVPGKSTY

Query:  TASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFRKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSYLHLMEFAYNNSYQA
        TASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF KGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDS+LHLMEFAYNNSYQA
Subjt:  TASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFRKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSYLHLMEFAYNNSYQA

Query:  TIGMAPFEALYGKCCRSSVCWG
        TIGMAPFEALYGKCCRS VCWG
Subjt:  TIGMAPFEALYGKCCRSSVCWG

KAA0051368.1 pol protein [Cucumis melo var. makuwa]1.0e-12496.4Show/hide
Query:  MHPGSTKMYHDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPKTLRGFTVIWVVVERLTKSAHFVPGKSTY
        MHPGSTKMY DLKRVYWWRNMKREVAEFVS+CLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLP+TLRGFTVIWVVV+RLTKSAHFVPGKSTY
Subjt:  MHPGSTKMYHDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPKTLRGFTVIWVVVERLTKSAHFVPGKSTY

Query:  TASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFRKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSYLHLMEFAYNNSYQA
        TASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF KGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDS+LHLMEFAYNNSYQA
Subjt:  TASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFRKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSYLHLMEFAYNNSYQA

Query:  TIGMAPFEALYGKCCRSSVCWG
        TIGMAPFEALYG+CCRS VCWG
Subjt:  TIGMAPFEALYGKCCRSSVCWG

KAA0065438.1 pol protein [Cucumis melo var. makuwa]1.0e-12496.85Show/hide
Query:  MHPGSTKMYHDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPKTLRGFTVIWVVVERLTKSAHFVPGKSTY
        MHPGSTKMY DLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLP+TLRGFTVIWVVV+RLTKSAHFVPGKSTY
Subjt:  MHPGSTKMYHDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPKTLRGFTVIWVVVERLTKSAHFVPGKSTY

Query:  TASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFRKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSYLHLMEFAYNNSYQA
        TASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF KGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDS+LHLMEFAYNNSYQA
Subjt:  TASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFRKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSYLHLMEFAYNNSYQA

Query:  TIGMAPFEALYGKCCRSSVCWG
        TI MAPFEALYGKCCRS VCWG
Subjt:  TIGMAPFEALYGKCCRSSVCWG

TrEMBL top hitse value%identityAlignment
A0A5A7SLT0 Pol protein2.3e-12596.85Show/hide
Query:  MHPGSTKMYHDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPKTLRGFTVIWVVVERLTKSAHFVPGKSTY
        MHPGSTKMY DLKRVYWWRNMKREVAEFVS+CLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLP+TLRGFTVIWVVV+RLTKSAHFVPGKSTY
Subjt:  MHPGSTKMYHDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPKTLRGFTVIWVVVERLTKSAHFVPGKSTY

Query:  TASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFRKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSYLHLMEFAYNNSYQA
        TASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF KGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDS+LHLMEFAYNNSYQA
Subjt:  TASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFRKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSYLHLMEFAYNNSYQA

Query:  TIGMAPFEALYGKCCRSSVCWG
        TIGMAPFEALYGKCCRS VCWG
Subjt:  TIGMAPFEALYGKCCRSSVCWG

A0A5A7SZD6 Pol protein5.0e-12596.4Show/hide
Query:  MHPGSTKMYHDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPKTLRGFTVIWVVVERLTKSAHFVPGKSTY
        MHPGSTKMY DLKRVYWWRNMKREVAEFVS+CLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLP+TLRGFTVIWVVV+RLTKSAHFVPGKSTY
Subjt:  MHPGSTKMYHDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPKTLRGFTVIWVVVERLTKSAHFVPGKSTY

Query:  TASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFRKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSYLHLMEFAYNNSYQA
        TASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF KGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWD++LHLMEFAYNNSYQA
Subjt:  TASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFRKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSYLHLMEFAYNNSYQA

Query:  TIGMAPFEALYGKCCRSSVCWG
        TIGMAPFEALYGKCCRS VCWG
Subjt:  TIGMAPFEALYGKCCRSSVCWG

A0A5A7TU00 Pol protein1.0e-12597.3Show/hide
Query:  MHPGSTKMYHDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPKTLRGFTVIWVVVERLTKSAHFVPGKSTY
        MHPGSTKMY DLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLP+TLRGFTVIWVVV+RLTKSAHFVPGKSTY
Subjt:  MHPGSTKMYHDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPKTLRGFTVIWVVVERLTKSAHFVPGKSTY

Query:  TASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFRKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSYLHLMEFAYNNSYQA
        TASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF KGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDS+LHLMEFAYNNSYQA
Subjt:  TASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFRKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSYLHLMEFAYNNSYQA

Query:  TIGMAPFEALYGKCCRSSVCWG
        TIGMAPFEALYGKCCRS VCWG
Subjt:  TIGMAPFEALYGKCCRSSVCWG

A0A5A7U7V9 Reverse transcriptase5.0e-12596.4Show/hide
Query:  MHPGSTKMYHDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPKTLRGFTVIWVVVERLTKSAHFVPGKSTY
        MHPGSTKMY DLKRVYWWRNMKREVAEFVS+CLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLP+TLRGFTVIWVVV+RLTKSAHFVPGKSTY
Subjt:  MHPGSTKMYHDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPKTLRGFTVIWVVVERLTKSAHFVPGKSTY

Query:  TASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFRKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSYLHLMEFAYNNSYQA
        TASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF KGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDS+LHLMEFAYNNSYQA
Subjt:  TASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFRKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSYLHLMEFAYNNSYQA

Query:  TIGMAPFEALYGKCCRSSVCWG
        TIGMAPFEALYG+CCRS VCWG
Subjt:  TIGMAPFEALYGKCCRSSVCWG

A0A5A7VCT0 Pol protein5.0e-12596.85Show/hide
Query:  MHPGSTKMYHDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPKTLRGFTVIWVVVERLTKSAHFVPGKSTY
        MHPGSTKMY DLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLP+TLRGFTVIWVVV+RLTKSAHFVPGKSTY
Subjt:  MHPGSTKMYHDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPKTLRGFTVIWVVVERLTKSAHFVPGKSTY

Query:  TASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFRKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSYLHLMEFAYNNSYQA
        TASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF KGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDS+LHLMEFAYNNSYQA
Subjt:  TASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFRKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSYLHLMEFAYNNSYQA

Query:  TIGMAPFEALYGKCCRSSVCWG
        TI MAPFEALYGKCCRS VCWG
Subjt:  TIGMAPFEALYGKCCRSSVCWG

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein2.9e-3735.55Show/hide
Query:  MHPGSTKMYHDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPKTLRGFTVIWVVVERLTKSAHFVPGKSTY
        +HPG   + + + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP++  G+  ++VVV+R +K A  VP   + 
Subjt:  MHPGSTKMYHDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPKTLRGFTVIWVVVERLTKSAHFVPGKSTY

Query:  TASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFRKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSYLHLMEFAYNNSYQA
        TA + A+++   ++   G P  I++D D  FTS+  K         + FS  + PQTDGQTER NQ +E +LR      P +W  ++ L++ +YNN+  +
Subjt:  TASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFRKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSYLHLMEFAYNNSYQA

Query:  TIGMAPFEALY
           M PFE ++
Subjt:  TIGMAPFEALY

P0CT41 Transposon Tf2-12 polyprotein2.9e-3735.55Show/hide
Query:  MHPGSTKMYHDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPKTLRGFTVIWVVVERLTKSAHFVPGKSTY
        +HPG   + + + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP++  G+  ++VVV+R +K A  VP   + 
Subjt:  MHPGSTKMYHDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPKTLRGFTVIWVVVERLTKSAHFVPGKSTY

Query:  TASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFRKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSYLHLMEFAYNNSYQA
        TA + A+++   ++   G P  I++D D  FTS+  K         + FS  + PQTDGQTER NQ +E +LR      P +W  ++ L++ +YNN+  +
Subjt:  TASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFRKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSYLHLMEFAYNNSYQA

Query:  TIGMAPFEALY
           M PFE ++
Subjt:  TIGMAPFEALY

Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein1.1e-3939.13Show/hide
Query:  HPGSTKMYHDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPKTLRGFTVIWVVVERLTKSAHFVPGKSTYT
        H G T     +  +Y+W  ++  + +++  C+ CQ +K+ R +  GLLQPL I E +W ++SMDF+TGLP T     +I VVV+R +K AHF+  + T  
Subjt:  HPGSTKMYHDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPKTLRGFTVIWVVVERLTKSAHFVPGKSTYT

Query:  ASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFRKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSYLHLMEFAYNNSYQAT
        A++   L    I   HG P +I SDRD R T+   + L   +G +   S+A HPQTDGQ+ER  Q L  +LRA       +W  YL  +EF YN++   T
Subjt:  ASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFRKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSYLHLMEFAYNNSYQAT

Query:  IGMAPFE
        +G +PFE
Subjt:  IGMAPFE

Q99315 Transposon Ty3-G Gag-Pol polyprotein3.7e-4039.61Show/hide
Query:  HPGSTKMYHDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPKTLRGFTVIWVVVERLTKSAHFVPGKSTYT
        H G T     +  +Y+W  ++  + +++  C+ CQ +K+ R +  GLLQPL I E +W ++SMDF+TGLP T     +I VVV+R +K AHF+  + T  
Subjt:  HPGSTKMYHDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPKTLRGFTVIWVVVERLTKSAHFVPGKSTYT

Query:  ASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFRKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSYLHLMEFAYNNSYQAT
        A++   L    I   HG P +I SDRD R T+   + L   +G +   S+A HPQTDGQ+ER  Q L  +LRA A     +W  YL  +EF YN++   T
Subjt:  ASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFRKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSYLHLMEFAYNNSYQAT

Query:  IGMAPFE
        +G +PFE
Subjt:  IGMAPFE

Q9UR07 Transposon Tf2-11 polyprotein2.9e-3735.55Show/hide
Query:  MHPGSTKMYHDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPKTLRGFTVIWVVVERLTKSAHFVPGKSTY
        +HPG   + + + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP++  G+  ++VVV+R +K A  VP   + 
Subjt:  MHPGSTKMYHDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPKTLRGFTVIWVVVERLTKSAHFVPGKSTY

Query:  TASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFRKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSYLHLMEFAYNNSYQA
        TA + A+++   ++   G P  I++D D  FTS+  K         + FS  + PQTDGQTER NQ +E +LR      P +W  ++ L++ +YNN+  +
Subjt:  TASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFRKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSYLHLMEFAYNNSYQA

Query:  TIGMAPFEALY
           M PFE ++
Subjt:  TIGMAPFEALY

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACCCTGGTAGTACGAAGATGTATCATGACCTGAAGCGGGTTTATTGGTGGCGTAACATGAAGAGGGAGGTAGCAGAATTTGTTAGTAGATGCTTGGTGTGT
CAGCAGGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTATTACAACCCTTGAGCATACCTGAATGGAAGTGGGAAAACGTGTCCATGGATTTCATTACAGGACTA
CCGAAAACTCTGAGGGGTTTTACAGTGATTTGGGTTGTGGTGGAAAGACTTACCAAATCAGCGCACTTCGTTCCGGGTAAATCCACCTATACTGCTAGTAAGTGG
GCACAGCTGTACATGTCTGAGATAGTGAGATTACATGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTCAGGAAGGGTTTGCAG
ACTGCTATGGGCACGAGGTTAGACTTTAGTACAGCTTTCCATCCACAGACTGACGGTCAGACTGAGCGTCTGAACCAAGTTTTAGAGGATATGTTGCGGGCGTGT
GCATTGGAATTTCCAGGTAGCTGGGACTCCTACTTACATTTGATGGAATTTGCTTATAATAACAGTTATCAGGCTACTATTGGCATGGCACCATTTGAGGCCTTG
TACGGCAAATGTTGTAGATCATCGGTTTGCTGGGGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCACCCTGGTAGTACGAAGATGTATCATGACCTGAAGCGGGTTTATTGGTGGCGTAACATGAAGAGGGAGGTAGCAGAATTTGTTAGTAGATGCTTGGTGTGT
CAGCAGGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTATTACAACCCTTGAGCATACCTGAATGGAAGTGGGAAAACGTGTCCATGGATTTCATTACAGGACTA
CCGAAAACTCTGAGGGGTTTTACAGTGATTTGGGTTGTGGTGGAAAGACTTACCAAATCAGCGCACTTCGTTCCGGGTAAATCCACCTATACTGCTAGTAAGTGG
GCACAGCTGTACATGTCTGAGATAGTGAGATTACATGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTCAGGAAGGGTTTGCAG
ACTGCTATGGGCACGAGGTTAGACTTTAGTACAGCTTTCCATCCACAGACTGACGGTCAGACTGAGCGTCTGAACCAAGTTTTAGAGGATATGTTGCGGGCGTGT
GCATTGGAATTTCCAGGTAGCTGGGACTCCTACTTACATTTGATGGAATTTGCTTATAATAACAGTTATCAGGCTACTATTGGCATGGCACCATTTGAGGCCTTG
TACGGCAAATGTTGTAGATCATCGGTTTGCTGGGGGTGA
Protein sequenceShow/hide protein sequence
MHPGSTKMYHDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPKTLRGFTVIWVVVERLTKSAHFVPGKSTYTASKW
AQLYMSEIVRLHGVPVSIVSDRDARFTSKFRKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSYLHLMEFAYNNSYQATIGMAPFEAL
YGKCCRSSVCWG