CuGenDBv2

Gene ID	Cmc08g0226101
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Genome location	CMiso1.1chr08:17725640..17728283
RNA-Seq Expression	Cmc08g0226101
Synteny	Cmc08g0226101
Gene Ontology terms	GO:0006278 - RNA-dependent DNA biosynthetic process (biological process) GO:0006508 - proteolysis (biological process) GO:0015074 - DNA integration (biological process) GO:0043227 - membrane-bounded organelle (cellular component) GO:0003676 - nucleic acid binding (molecular function) GO:0003964 - RNA-directed DNA polymerase activity (molecular function) GO:0004190 - aspartic-type endopeptidase activity (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR000477 - Reverse transcriptase domain IPR001584 - Integrase, catalytic core IPR012337 - Ribonuclease H-like superfamily IPR036397 - Ribonuclease H superfamily IPR041373 - Reverse transcriptase, RNase H-like domain IPR041588 - Integrase zinc-binding domain IPR043128 - Reverse transcriptase/Diguanylate cyclase domain IPR043502 - DNA/RNA polymerase superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0026271.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

90.79

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRGLNKVTVKNRYPLPRIDDLFDQLQGAKVFSKIDLRSGYHQRRIKDGDVPK
        MAPAELKELKVQLQ+LLDKGFIR SVSPWGAPVLFVKKKDGSMRLCIDYR LNKVTVKNRYPLPRIDDLFDQLQGA VFSKIDLRSGYHQ RIKDGDVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRGLNKVTVKNRYPLPRIDDLFDQLQGAKVFSKIDLRSGYHQRRIKDGDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHKEHLRI-----------------------VSFLGHVVSKAG
        TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEH+EHLRI                       VSFLGHVVSKAG
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHKEHLRI-----------------------VSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLTGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGL GYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLTGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQVFTDHKSLKYFFTPKELNMRQRRWLELVKDYDFEILYHPGKANVVVDA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQ+FTDHKSLKYFFT KELNMRQRRWLELVKDYD EILYHPGKANVV DA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQVFTDHKSLKYFFTPKELNMRQRRWLELVKDYDFEILYHPGKANVVVDA

Query:  LSRKVSHSSALITRQAPLHRDFEQAEIAVSVGAVTMQLAQLT---------------------KRGLAEVGQAVEFSISSDGGLLFERRLCVPSDSAVKT
        LSRKVSHS+ALITRQAPLHRD E+AEIAVSVGAVTMQLAQLT                     KR LAE GQAVEFS+SSDGGLLFER LCVPSDSA KT
Subjt:  LSRKVSHSSALITRQAPLHRDFEQAEIAVSVGAVTMQLAQLT---------------------KRGLAEVGQAVEFSISSDGGLLFERRLCVPSDSAVKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKMEVAEFVNRCLVCQQVKALRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTLIWVVVDRLT
        ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMK EVAEFV++CLVCQQVKA RQKP GLLQPLSIPEWKWENVSMDFITGLPRTLRGFT+IWVVVDRLT
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKMEVAEFVNRCLVCQQVKALRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTLIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGTWDSHLH
        KSAHFVPGKSTYTASKWAQLYMSEIVRLH VPVSIVSD+DARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPG+WDSHLH
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGTWDSHLH

Query:  LMEFAYNNSYQATIGMAPFEALYGKCCRSSVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRF
        LMEFAYNNSYQATIGM PFEALYGKCCRS VCWGEVGEQ LMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEF +GDKVFLKVAPMRGVLRF
Subjt:  LMEFAYNNSYQATIGMAPFEALYGKCCRSSVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRF

Query:  ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
        ERRGKLSPRFV PFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
Subjt:  ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK

KAA0035816.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

98.51

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRGLNKVTVKNRYPLPRIDDLFDQLQGAKVFSKIDLRSGYHQRRIKDGDVPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRGLNKVTVKNRYPLPRIDDLFDQLQGAKVFSKIDLRSGYHQRRIKDGDVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRGLNKVTVKNRYPLPRIDDLFDQLQGAKVFSKIDLRSGYHQRRIKDGDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHKEHLRIVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEV
        TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHKEHLRIVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEV
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHKEHLRIVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEV

Query:  RSFLGLTGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQ
        RSFLGLTGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQ
Subjt:  RSFLGLTGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQ

Query:  NYPTHDLELAAVVFALKIWRHYLYGEKIQVFTDHKSLKYFFTPKELNMRQRRWLELVKDYDFEILYHPGKANVVVDALSRKVSHSSALITRQAPLHRDFE
        NYPTHDLELAAVVFALKIWRHYLYGEKIQVFTDHKSLKYFFTPKELNMRQRRWLELVKDYDFEILYHPGKANVVVDALSRKVSHSSALITRQAPLHRDFE
Subjt:  NYPTHDLELAAVVFALKIWRHYLYGEKIQVFTDHKSLKYFFTPKELNMRQRRWLELVKDYDFEILYHPGKANVVVDALSRKVSHSSALITRQAPLHRDFE

Query:  QAEIAVSVGAVTMQLAQLTKRGLAEVGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKMEVAEFVNRC
        QAEIAV + A +     + KRGLAEVGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKMEVAEFVNRC
Subjt:  QAEIAVSVGAVTMQLAQLTKRGLAEVGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKMEVAEFVNRC

Query:  LVCQQVKALRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTLIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFT
        LVCQQVKALRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTLIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFT
Subjt:  LVCQQVKALRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTLIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFT

Query:  SKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGTWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSSVCWGEVGEQRLMGP
        SKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGTWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSSVCWGEVGEQRLMGP
Subjt:  SKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGTWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSSVCWGEVGEQRLMGP

Query:  ELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSM
        ELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSM
Subjt:  ELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSM

Query:  LRK
        LRK
Subjt:  LRK

KAA0048687.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

91.38

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRGLNKVTVKNRYPLPRIDDLFDQLQGAKVFSKIDLRSGYHQRRIKDGDVPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYR LNKVTVKNRYPLPRIDDLFDQLQGA VFSKIDLRSGYHQ RIKD DVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRGLNKVTVKNRYPLPRIDDLFDQLQGAKVFSKIDLRSGYHQRRIKDGDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHKEHLRI-----------------------VSFLGHVVSKAG
        TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEH+EHLR+                       VSFLGHVVSKAG
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHKEHLRI-----------------------VSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLTGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGL GYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLTGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQVFTDHKSLKYFFTPKELNMRQRRWLELVKDYDFEILYHPGKANVVVDA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQ+FTDHKSLKYFFT KELNMRQRRWLELVKDYD EILYHPGKANVV DA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQVFTDHKSLKYFFTPKELNMRQRRWLELVKDYDFEILYHPGKANVVVDA

Query:  LSRKVSHSSALITRQAPLHRDFEQAEIAVSVGAVTMQLAQLT---------------------KRGLAEVGQAVEFSISSDGGLLFERRLCVPSDSAVKT
        LSRKVSHS+ALITRQAPLHRD E+AEIAVSVGAVTMQLAQLT                     KRGLAE GQAVEFS+SSDGGLLFERRLCVPSDS VKT
Subjt:  LSRKVSHSSALITRQAPLHRDFEQAEIAVSVGAVTMQLAQLT---------------------KRGLAEVGQAVEFSISSDGGLLFERRLCVPSDSAVKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKMEVAEFVNRCLVCQQVKALRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTLIWVVVDRLT
        ELLSEAHSSPFSMHPGSTKMY+D+KRVYWWRNMK EVAEFV+RCLVCQQVKA RQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFT+IWVVVDRLT
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKMEVAEFVNRCLVCQQVKALRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTLIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGTWDSHLH
        KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWK LQTAMGTRLDFSTAFHPQTDGQTERLNQVLE MLRACALEFPG+WDSHLH
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGTWDSHLH

Query:  LMEFAYNNSYQATIGMAPFEALYGKCCRSSVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRF
        LMEF YNNSYQATIGMAPFEALYGKCCRS VCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRF
Subjt:  LMEFAYNNSYQATIGMAPFEALYGKCCRSSVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRF

Query:  ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
        ERRGKLSPRF+GPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
Subjt:  ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK

KAA0051357.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

90.79

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRGLNKVTVKNRYPLPRIDDLFDQLQGAKVFSKIDLRSGYHQRRIKDGDVPK
        MAPAELKELKVQLQELLDKGFIRP+VSPWGAPVLFVKKKDGSMRLCIDYR LNKVTVKNRYPLPRIDDLFDQLQGA VFSKIDLRSGY+Q RIKD DVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRGLNKVTVKNRYPLPRIDDLFDQLQGAKVFSKIDLRSGYHQRRIKDGDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHKEHLRI-----------------------VSFLGHVVSKAG
        TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEH+EHLR+                       VSFLGHVVSKA 
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHKEHLRI-----------------------VSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLTGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGL GYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLTGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQVFTDHKSLKYFFTPKELNMRQRRWLELVKDYDFEILYHPGKANVVVDA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQ+FTDHKSLKYFFT KELNMRQRRWLELVKDYD EILYHPGKANVV DA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQVFTDHKSLKYFFTPKELNMRQRRWLELVKDYDFEILYHPGKANVVVDA

Query:  LSRKVSHSSALITRQAPLHRDFEQAEIAVSVGAVTMQLAQLT---------------------KRGLAEVGQAVEFSISSDGGLLFERRLCVPSDSAVKT
        LSRKVSHS+ALITRQAPLHRD E+AEIAVSVGAVTMQLAQLT                     KRGLAE GQAVEFS+SSDGGL FE RLCVPSDSAVKT
Subjt:  LSRKVSHSSALITRQAPLHRDFEQAEIAVSVGAVTMQLAQLT---------------------KRGLAEVGQAVEFSISSDGGLLFERRLCVPSDSAVKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKMEVAEFVNRCLVCQQVKALRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTLIWVVVDRLT
        ELL EAHSSPFSMHPGSTKMYQDLKRVYWWRNMK EVAEFV++CLVCQQVK  RQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFT+IWVVVDRLT
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKMEVAEFVNRCLVCQQVKALRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTLIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGTWDSHLH
        KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQ DGQTERLNQVLEDMLRACALEFPG+WDSHLH
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGTWDSHLH

Query:  LMEFAYNNSYQATIGMAPFEALYGKCCRSSVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRF
        LMEFAYNNSYQATIGMAPFEALYGKCCRS VCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFE+ DKVFLKVAPM+GVLRF
Subjt:  LMEFAYNNSYQATIGMAPFEALYGKCCRSSVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRF

Query:  ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
        ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
Subjt:  ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK

KAA0057672.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

90.91

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRGLNKVTVKNRYPLPRIDDLFDQLQGAKVFSKIDLRSGYHQRRIKDGDVPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYR LNKVTVKNRYPLPRIDDLFDQLQGA VFSKIDLRSG HQ RIKD DVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRGLNKVTVKNRYPLPRIDDLFDQLQGAKVFSKIDLRSGYHQRRIKDGDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHKEHLRI-----------------------VSFLGHVVSKAG
        TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEH+EHLR+                       VSFLGHVVSKAG
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHKEHLRI-----------------------VSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLTGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGL GYYRRFVENFSR ATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLTGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQVFTDHKSLKYFFTPKELNMRQRRWLELVKDYDFEILYHPGKANVVVDA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQ+FTDHKSLKYFFT KELNMRQRRWLELVKDYD EILYHPGKANVV DA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQVFTDHKSLKYFFTPKELNMRQRRWLELVKDYDFEILYHPGKANVVVDA

Query:  LSRKVSHSSALITRQAPLHRDFEQAEIAVSVGAVTMQLAQLT---------------------KRGLAEVGQAVEFSISSDGGLLFERRLCVPSDSAVKT
        LSRKVSHS+ALITRQAPLHRD E+AEIAVSVGAVTMQLAQLT                     KRGLAE GQAVEFS+SSDGGLLFERRLCVPSDSAVKT
Subjt:  LSRKVSHSSALITRQAPLHRDFEQAEIAVSVGAVTMQLAQLT---------------------KRGLAEVGQAVEFSISSDGGLLFERRLCVPSDSAVKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKMEVAEFVNRCLVCQQVKALRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTLIWVVVDRLT
        ELL+EAHSSPFSMHPGSTKMYQDLKR+YWWRNMK EVAEFV++CLVCQQVKA RQKPAGLLQPLSIPEWKWENVSMDFI GLPRTLRGFT+IWVVVDRLT
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKMEVAEFVNRCLVCQQVKALRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTLIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGTWDSHLH
        KSAHFVPGKSTYT SKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLN+VLEDMLRACALEFPG+WDSHLH
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGTWDSHLH

Query:  LMEFAYNNSYQATIGMAPFEALYGKCCRSSVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRF
        LMEFAYNNSYQATIGMAPFEALY KCCRS +CWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGV+RF
Subjt:  LMEFAYNNSYQATIGMAPFEALYGKCCRSSVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRF

Query:  ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
        ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
Subjt:  ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SPZ2 Pol protein

0.0e+00

90.79

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRGLNKVTVKNRYPLPRIDDLFDQLQGAKVFSKIDLRSGYHQRRIKDGDVPK
        MAPAELKELKVQLQ+LLDKGFIR SVSPWGAPVLFVKKKDGSMRLCIDYR LNKVTVKNRYPLPRIDDLFDQLQGA VFSKIDLRSGYHQ RIKDGDVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRGLNKVTVKNRYPLPRIDDLFDQLQGAKVFSKIDLRSGYHQRRIKDGDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHKEHLRI-----------------------VSFLGHVVSKAG
        TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEH+EHLRI                       VSFLGHVVSKAG
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHKEHLRI-----------------------VSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLTGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGL GYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLTGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQVFTDHKSLKYFFTPKELNMRQRRWLELVKDYDFEILYHPGKANVVVDA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQ+FTDHKSLKYFFT KELNMRQRRWLELVKDYD EILYHPGKANVV DA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQVFTDHKSLKYFFTPKELNMRQRRWLELVKDYDFEILYHPGKANVVVDA

Query:  LSRKVSHSSALITRQAPLHRDFEQAEIAVSVGAVTMQLAQLT---------------------KRGLAEVGQAVEFSISSDGGLLFERRLCVPSDSAVKT
        LSRKVSHS+ALITRQAPLHRD E+AEIAVSVGAVTMQLAQLT                     KR LAE GQAVEFS+SSDGGLLFER LCVPSDSA KT
Subjt:  LSRKVSHSSALITRQAPLHRDFEQAEIAVSVGAVTMQLAQLT---------------------KRGLAEVGQAVEFSISSDGGLLFERRLCVPSDSAVKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKMEVAEFVNRCLVCQQVKALRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTLIWVVVDRLT
        ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMK EVAEFV++CLVCQQVKA RQKP GLLQPLSIPEWKWENVSMDFITGLPRTLRGFT+IWVVVDRLT
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKMEVAEFVNRCLVCQQVKALRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTLIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGTWDSHLH
        KSAHFVPGKSTYTASKWAQLYMSEIVRLH VPVSIVSD+DARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPG+WDSHLH
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGTWDSHLH

Query:  LMEFAYNNSYQATIGMAPFEALYGKCCRSSVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRF
        LMEFAYNNSYQATIGM PFEALYGKCCRS VCWGEVGEQ LMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEF +GDKVFLKVAPMRGVLRF
Subjt:  LMEFAYNNSYQATIGMAPFEALYGKCCRSSVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRF

Query:  ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
        ERRGKLSPRFV PFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
Subjt:  ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK

A0A5A7T0S7 Reverse transcriptase

0.0e+00

98.51

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRGLNKVTVKNRYPLPRIDDLFDQLQGAKVFSKIDLRSGYHQRRIKDGDVPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRGLNKVTVKNRYPLPRIDDLFDQLQGAKVFSKIDLRSGYHQRRIKDGDVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRGLNKVTVKNRYPLPRIDDLFDQLQGAKVFSKIDLRSGYHQRRIKDGDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHKEHLRIVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEV
        TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHKEHLRIVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEV
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHKEHLRIVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEV

Query:  RSFLGLTGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQ
        RSFLGLTGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQ
Subjt:  RSFLGLTGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQ

Query:  NYPTHDLELAAVVFALKIWRHYLYGEKIQVFTDHKSLKYFFTPKELNMRQRRWLELVKDYDFEILYHPGKANVVVDALSRKVSHSSALITRQAPLHRDFE
        NYPTHDLELAAVVFALKIWRHYLYGEKIQVFTDHKSLKYFFTPKELNMRQRRWLELVKDYDFEILYHPGKANVVVDALSRKVSHSSALITRQAPLHRDFE
Subjt:  NYPTHDLELAAVVFALKIWRHYLYGEKIQVFTDHKSLKYFFTPKELNMRQRRWLELVKDYDFEILYHPGKANVVVDALSRKVSHSSALITRQAPLHRDFE

Query:  QAEIAVSVGAVTMQLAQLTKRGLAEVGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKMEVAEFVNRC
        QAEIAV + A +     + KRGLAEVGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKMEVAEFVNRC
Subjt:  QAEIAVSVGAVTMQLAQLTKRGLAEVGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKMEVAEFVNRC

Query:  LVCQQVKALRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTLIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFT
        LVCQQVKALRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTLIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFT
Subjt:  LVCQQVKALRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTLIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFT

Query:  SKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGTWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSSVCWGEVGEQRLMGP
        SKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGTWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSSVCWGEVGEQRLMGP
Subjt:  SKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGTWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSSVCWGEVGEQRLMGP

Query:  ELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSM
        ELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSM
Subjt:  ELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSM

Query:  LRK
        LRK
Subjt:  LRK

A0A5A7U330 Reverse transcriptase

0.0e+00

91.38

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRGLNKVTVKNRYPLPRIDDLFDQLQGAKVFSKIDLRSGYHQRRIKDGDVPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYR LNKVTVKNRYPLPRIDDLFDQLQGA VFSKIDLRSGYHQ RIKD DVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRGLNKVTVKNRYPLPRIDDLFDQLQGAKVFSKIDLRSGYHQRRIKDGDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHKEHLRI-----------------------VSFLGHVVSKAG
        TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEH+EHLR+                       VSFLGHVVSKAG
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHKEHLRI-----------------------VSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLTGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGL GYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLTGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQVFTDHKSLKYFFTPKELNMRQRRWLELVKDYDFEILYHPGKANVVVDA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQ+FTDHKSLKYFFT KELNMRQRRWLELVKDYD EILYHPGKANVV DA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQVFTDHKSLKYFFTPKELNMRQRRWLELVKDYDFEILYHPGKANVVVDA

Query:  LSRKVSHSSALITRQAPLHRDFEQAEIAVSVGAVTMQLAQLT---------------------KRGLAEVGQAVEFSISSDGGLLFERRLCVPSDSAVKT
        LSRKVSHS+ALITRQAPLHRD E+AEIAVSVGAVTMQLAQLT                     KRGLAE GQAVEFS+SSDGGLLFERRLCVPSDS VKT
Subjt:  LSRKVSHSSALITRQAPLHRDFEQAEIAVSVGAVTMQLAQLT---------------------KRGLAEVGQAVEFSISSDGGLLFERRLCVPSDSAVKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKMEVAEFVNRCLVCQQVKALRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTLIWVVVDRLT
        ELLSEAHSSPFSMHPGSTKMY+D+KRVYWWRNMK EVAEFV+RCLVCQQVKA RQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFT+IWVVVDRLT
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKMEVAEFVNRCLVCQQVKALRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTLIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGTWDSHLH
        KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWK LQTAMGTRLDFSTAFHPQTDGQTERLNQVLE MLRACALEFPG+WDSHLH
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGTWDSHLH

Query:  LMEFAYNNSYQATIGMAPFEALYGKCCRSSVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRF
        LMEF YNNSYQATIGMAPFEALYGKCCRS VCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRF
Subjt:  LMEFAYNNSYQATIGMAPFEALYGKCCRSSVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRF

Query:  ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
        ERRGKLSPRF+GPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
Subjt:  ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK

A0A5A7UAA8 Reverse transcriptase

0.0e+00

90.79

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRGLNKVTVKNRYPLPRIDDLFDQLQGAKVFSKIDLRSGYHQRRIKDGDVPK
        MAPAELKELKVQLQELLDKGFIRP+VSPWGAPVLFVKKKDGSMRLCIDYR LNKVTVKNRYPLPRIDDLFDQLQGA VFSKIDLRSGY+Q RIKD DVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRGLNKVTVKNRYPLPRIDDLFDQLQGAKVFSKIDLRSGYHQRRIKDGDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHKEHLRI-----------------------VSFLGHVVSKAG
        TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEH+EHLR+                       VSFLGHVVSKA 
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHKEHLRI-----------------------VSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLTGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGL GYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLTGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQVFTDHKSLKYFFTPKELNMRQRRWLELVKDYDFEILYHPGKANVVVDA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQ+FTDHKSLKYFFT KELNMRQRRWLELVKDYD EILYHPGKANVV DA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQVFTDHKSLKYFFTPKELNMRQRRWLELVKDYDFEILYHPGKANVVVDA

Query:  LSRKVSHSSALITRQAPLHRDFEQAEIAVSVGAVTMQLAQLT---------------------KRGLAEVGQAVEFSISSDGGLLFERRLCVPSDSAVKT
        LSRKVSHS+ALITRQAPLHRD E+AEIAVSVGAVTMQLAQLT                     KRGLAE GQAVEFS+SSDGGL FE RLCVPSDSAVKT
Subjt:  LSRKVSHSSALITRQAPLHRDFEQAEIAVSVGAVTMQLAQLT---------------------KRGLAEVGQAVEFSISSDGGLLFERRLCVPSDSAVKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKMEVAEFVNRCLVCQQVKALRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTLIWVVVDRLT
        ELL EAHSSPFSMHPGSTKMYQDLKRVYWWRNMK EVAEFV++CLVCQQVK  RQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFT+IWVVVDRLT
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKMEVAEFVNRCLVCQQVKALRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTLIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGTWDSHLH
        KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQ DGQTERLNQVLEDMLRACALEFPG+WDSHLH
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGTWDSHLH

Query:  LMEFAYNNSYQATIGMAPFEALYGKCCRSSVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRF
        LMEFAYNNSYQATIGMAPFEALYGKCCRS VCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFE+ DKVFLKVAPM+GVLRF
Subjt:  LMEFAYNNSYQATIGMAPFEALYGKCCRSSVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRF

Query:  ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
        ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
Subjt:  ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK

A0A5A7UP94 Pol protein

0.0e+00

90.91

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRGLNKVTVKNRYPLPRIDDLFDQLQGAKVFSKIDLRSGYHQRRIKDGDVPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYR LNKVTVKNRYPLPRIDDLFDQLQGA VFSKIDLRSG HQ RIKD DVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRGLNKVTVKNRYPLPRIDDLFDQLQGAKVFSKIDLRSGYHQRRIKDGDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHKEHLRI-----------------------VSFLGHVVSKAG
        TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEH+EHLR+                       VSFLGHVVSKAG
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHKEHLRI-----------------------VSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLTGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGL GYYRRFVENFSR ATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLTGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQVFTDHKSLKYFFTPKELNMRQRRWLELVKDYDFEILYHPGKANVVVDA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQ+FTDHKSLKYFFT KELNMRQRRWLELVKDYD EILYHPGKANVV DA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQVFTDHKSLKYFFTPKELNMRQRRWLELVKDYDFEILYHPGKANVVVDA

Query:  LSRKVSHSSALITRQAPLHRDFEQAEIAVSVGAVTMQLAQLT---------------------KRGLAEVGQAVEFSISSDGGLLFERRLCVPSDSAVKT
        LSRKVSHS+ALITRQAPLHRD E+AEIAVSVGAVTMQLAQLT                     KRGLAE GQAVEFS+SSDGGLLFERRLCVPSDSAVKT
Subjt:  LSRKVSHSSALITRQAPLHRDFEQAEIAVSVGAVTMQLAQLT---------------------KRGLAEVGQAVEFSISSDGGLLFERRLCVPSDSAVKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKMEVAEFVNRCLVCQQVKALRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTLIWVVVDRLT
        ELL+EAHSSPFSMHPGSTKMYQDLKR+YWWRNMK EVAEFV++CLVCQQVKA RQKPAGLLQPLSIPEWKWENVSMDFI GLPRTLRGFT+IWVVVDRLT
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKMEVAEFVNRCLVCQQVKALRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTLIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGTWDSHLH
        KSAHFVPGKSTYT SKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLN+VLEDMLRACALEFPG+WDSHLH
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGTWDSHLH

Query:  LMEFAYNNSYQATIGMAPFEALYGKCCRSSVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRF
        LMEFAYNNSYQATIGMAPFEALY KCCRS +CWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGV+RF
Subjt:  LMEFAYNNSYQATIGMAPFEALYGKCCRSSVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRF

Query:  ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
        ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
Subjt:  ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK

SwissProt top hits

e value

%identity

Alignment

P0CT34 Transposon Tf2-1 polyprotein

5.6e-131

32.94

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRGLNKVTVKNRYPLPRIDDLFDQLQGAKVFSKIDLRSGYHQRRIKDGDVPK
        + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+ +F+K+DL+S YH  R++ GD  K
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRGLNKVTVKNRYPLPRIDDLFDQLQGAKVFSKIDLRSGYHQRRIKDGDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHKEHLR-----------------------IVSFLGHVVSKAG
         AFR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++                        V F+G+ +S+ G
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHKEHLR-----------------------IVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLTGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
         +     I+ V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLTGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQVFTDHKSLKYFFT--PKELNMRQRRWLELVKDYDFEILYHP
        G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  ++ TDH++L    T   +  N R  RW   ++D++FEI Y P
Subjt:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQVFTDHKSLKYFFT--PKELNMRQRRWLELVKDYDFEILYHP

Query:  GKANVVVDALSRKVSHSSALITRQAPLHRDFEQAEI----AVSV-----GAVTMQLAQLTK--RGLAEVGQAVEFSISSDGGLLFERR--LCVPSDSAVK
        G AN + DALSR       ++    P+ +D E   I     +S+       V  +    TK    L    + VE +I    GLL   +  + +P+D+ + 
Subjt:  GKANVVVDALSRKVSHSSALITRQAPLHRDFEQAEI----AVSV-----GAVTMQLAQLTK--RGLAEVGQAVEFSISSDGGLLFERR--LCVPSDSAVK

Query:  TELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKMEVAEFVNRCLVCQQVKALRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTLIWVVVDRL
          ++ + H     +HPG   +   + R + W+ ++ ++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR 
Subjt:  TELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKMEVAEFVNRCLVCQQVKALRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTLIWVVVDRL

Query:  TKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGTWDSHL
        +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR      P TW  H+
Subjt:  TKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGTWDSHL

Query:  HLMEFAYNNSYQATIGMAPFEALYGKCCRSSVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVL
         L++ +YNN+  +   M PFE ++      S    E+        E  Q T +  Q ++  ++T   + K Y D++ +++ EF+ GD V +K     G L
Subjt:  HLMEFAYNNSYQATIGMAPFEALYGKCCRSSVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVL

Query:  RFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRK
           +  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L K
Subjt:  RFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRK

P0CT35 Transposon Tf2-2 polyprotein

5.6e-131

32.94

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRGLNKVTVKNRYPLPRIDDLFDQLQGAKVFSKIDLRSGYHQRRIKDGDVPK
        + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+ +F+K+DL+S YH  R++ GD  K
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRGLNKVTVKNRYPLPRIDDLFDQLQGAKVFSKIDLRSGYHQRRIKDGDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHKEHLR-----------------------IVSFLGHVVSKAG
         AFR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++                        V F+G+ +S+ G
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHKEHLR-----------------------IVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLTGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
         +     I+ V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLTGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQVFTDHKSLKYFFT--PKELNMRQRRWLELVKDYDFEILYHP
        G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  ++ TDH++L    T   +  N R  RW   ++D++FEI Y P
Subjt:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQVFTDHKSLKYFFT--PKELNMRQRRWLELVKDYDFEILYHP

Query:  GKANVVVDALSRKVSHSSALITRQAPLHRDFEQAEI----AVSV-----GAVTMQLAQLTK--RGLAEVGQAVEFSISSDGGLLFERR--LCVPSDSAVK
        G AN + DALSR       ++    P+ +D E   I     +S+       V  +    TK    L    + VE +I    GLL   +  + +P+D+ + 
Subjt:  GKANVVVDALSRKVSHSSALITRQAPLHRDFEQAEI----AVSV-----GAVTMQLAQLTK--RGLAEVGQAVEFSISSDGGLLFERR--LCVPSDSAVK

Query:  TELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKMEVAEFVNRCLVCQQVKALRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTLIWVVVDRL
          ++ + H     +HPG   +   + R + W+ ++ ++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR 
Subjt:  TELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKMEVAEFVNRCLVCQQVKALRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTLIWVVVDRL

Query:  TKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGTWDSHL
        +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR      P TW  H+
Subjt:  TKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGTWDSHL

Query:  HLMEFAYNNSYQATIGMAPFEALYGKCCRSSVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVL
         L++ +YNN+  +   M PFE ++      S    E+        E  Q T +  Q ++  ++T   + K Y D++ +++ EF+ GD V +K     G L
Subjt:  HLMEFAYNNSYQATIGMAPFEALYGKCCRSSVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVL

Query:  RFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRK
           +  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L K
Subjt:  RFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRK

P0CT36 Transposon Tf2-3 polyprotein

5.6e-131

32.94

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRGLNKVTVKNRYPLPRIDDLFDQLQGAKVFSKIDLRSGYHQRRIKDGDVPK
        + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+ +F+K+DL+S YH  R++ GD  K
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRGLNKVTVKNRYPLPRIDDLFDQLQGAKVFSKIDLRSGYHQRRIKDGDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHKEHLR-----------------------IVSFLGHVVSKAG
         AFR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++                        V F+G+ +S+ G
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHKEHLR-----------------------IVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLTGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
         +     I+ V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLTGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQVFTDHKSLKYFFT--PKELNMRQRRWLELVKDYDFEILYHP
        G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  ++ TDH++L    T   +  N R  RW   ++D++FEI Y P
Subjt:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQVFTDHKSLKYFFT--PKELNMRQRRWLELVKDYDFEILYHP

Query:  GKANVVVDALSRKVSHSSALITRQAPLHRDFEQAEI----AVSV-----GAVTMQLAQLTK--RGLAEVGQAVEFSISSDGGLLFERR--LCVPSDSAVK
        G AN + DALSR       ++    P+ +D E   I     +S+       V  +    TK    L    + VE +I    GLL   +  + +P+D+ + 
Subjt:  GKANVVVDALSRKVSHSSALITRQAPLHRDFEQAEI----AVSV-----GAVTMQLAQLTK--RGLAEVGQAVEFSISSDGGLLFERR--LCVPSDSAVK

Query:  TELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKMEVAEFVNRCLVCQQVKALRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTLIWVVVDRL
          ++ + H     +HPG   +   + R + W+ ++ ++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR 
Subjt:  TELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKMEVAEFVNRCLVCQQVKALRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTLIWVVVDRL

Query:  TKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGTWDSHL
        +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR      P TW  H+
Subjt:  TKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGTWDSHL

Query:  HLMEFAYNNSYQATIGMAPFEALYGKCCRSSVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVL
         L++ +YNN+  +   M PFE ++      S    E+        E  Q T +  Q ++  ++T   + K Y D++ +++ EF+ GD V +K     G L
Subjt:  HLMEFAYNNSYQATIGMAPFEALYGKCCRSSVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVL

Query:  RFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRK
           +  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L K
Subjt:  RFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRK

P0CT37 Transposon Tf2-4 polyprotein

5.6e-131

32.94

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRGLNKVTVKNRYPLPRIDDLFDQLQGAKVFSKIDLRSGYHQRRIKDGDVPK
        + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+ +F+K+DL+S YH  R++ GD  K
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRGLNKVTVKNRYPLPRIDDLFDQLQGAKVFSKIDLRSGYHQRRIKDGDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHKEHLR-----------------------IVSFLGHVVSKAG
         AFR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++                        V F+G+ +S+ G
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHKEHLR-----------------------IVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLTGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
         +     I+ V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLTGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQVFTDHKSLKYFFT--PKELNMRQRRWLELVKDYDFEILYHP
        G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  ++ TDH++L    T   +  N R  RW   ++D++FEI Y P
Subjt:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQVFTDHKSLKYFFT--PKELNMRQRRWLELVKDYDFEILYHP

Query:  GKANVVVDALSRKVSHSSALITRQAPLHRDFEQAEI----AVSV-----GAVTMQLAQLTK--RGLAEVGQAVEFSISSDGGLLFERR--LCVPSDSAVK
        G AN + DALSR       ++    P+ +D E   I     +S+       V  +    TK    L    + VE +I    GLL   +  + +P+D+ + 
Subjt:  GKANVVVDALSRKVSHSSALITRQAPLHRDFEQAEI----AVSV-----GAVTMQLAQLTK--RGLAEVGQAVEFSISSDGGLLFERR--LCVPSDSAVK

Query:  TELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKMEVAEFVNRCLVCQQVKALRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTLIWVVVDRL
          ++ + H     +HPG   +   + R + W+ ++ ++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR 
Subjt:  TELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKMEVAEFVNRCLVCQQVKALRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTLIWVVVDRL

Query:  TKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGTWDSHL
        +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR      P TW  H+
Subjt:  TKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGTWDSHL

Query:  HLMEFAYNNSYQATIGMAPFEALYGKCCRSSVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVL
         L++ +YNN+  +   M PFE ++      S    E+        E  Q T +  Q ++  ++T   + K Y D++ +++ EF+ GD V +K     G L
Subjt:  HLMEFAYNNSYQATIGMAPFEALYGKCCRSSVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVL

Query:  RFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRK
           +  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L K
Subjt:  RFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRK

P0CT41 Transposon Tf2-12 polyprotein

5.6e-131

32.94

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRGLNKVTVKNRYPLPRIDDLFDQLQGAKVFSKIDLRSGYHQRRIKDGDVPK
        + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+ +F+K+DL+S YH  R++ GD  K
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRGLNKVTVKNRYPLPRIDDLFDQLQGAKVFSKIDLRSGYHQRRIKDGDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHKEHLR-----------------------IVSFLGHVVSKAG
         AFR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++                        V F+G+ +S+ G
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHKEHLR-----------------------IVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLTGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
         +     I+ V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLTGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQVFTDHKSLKYFFT--PKELNMRQRRWLELVKDYDFEILYHP
        G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  ++ TDH++L    T   +  N R  RW   ++D++FEI Y P
Subjt:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQVFTDHKSLKYFFT--PKELNMRQRRWLELVKDYDFEILYHP

Query:  GKANVVVDALSRKVSHSSALITRQAPLHRDFEQAEI----AVSV-----GAVTMQLAQLTK--RGLAEVGQAVEFSISSDGGLLFERR--LCVPSDSAVK
        G AN + DALSR       ++    P+ +D E   I     +S+       V  +    TK    L    + VE +I    GLL   +  + +P+D+ + 
Subjt:  GKANVVVDALSRKVSHSSALITRQAPLHRDFEQAEI----AVSV-----GAVTMQLAQLTK--RGLAEVGQAVEFSISSDGGLLFERR--LCVPSDSAVK

Query:  TELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKMEVAEFVNRCLVCQQVKALRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTLIWVVVDRL
          ++ + H     +HPG   +   + R + W+ ++ ++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR 
Subjt:  TELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKMEVAEFVNRCLVCQQVKALRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTLIWVVVDRL

Query:  TKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGTWDSHL
        +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR      P TW  H+
Subjt:  TKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGTWDSHL

Query:  HLMEFAYNNSYQATIGMAPFEALYGKCCRSSVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVL
         L++ +YNN+  +   M PFE ++      S    E+        E  Q T +  Q ++  ++T   + K Y D++ +++ EF+ GD V +K     G L
Subjt:  HLMEFAYNNSYQATIGMAPFEALYGKCCRSSVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVL

Query:  RFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRK
           +  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L K
Subjt:  RFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRK

Arabidopsis top hits

e value

%identity

Alignment

ATMG00860.1 DNA/RNA polymerases superfamily protein

9.9e-22

47.12

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Query:  VSFLG--HVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLTGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGS
        +++LG  H++S  GVS DPAK+EA+ GW  P   +E+R FLGLTGYYRRFV+N+ +I  PLT+L +K +   W++    +F+ LK  + T PVL +PD  
Subjt:  VSFLG--HVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLTGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGS

Query:  GSFV
          FV
Subjt:  GSFV

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCCCCCGCAGAGCTGAAAGAATTAAAGGTGCAGTTACAAGAATTGCTTGATAAGGGATTCATTCGACCGAGCGTGTCACCTTGGGGTGCGCCAGTTTTATTTGTTAA
GAAGAAGGATGGATCGATGCGTCTATGCATTGACTATAGGGGGTTGAACAAGGTAACCGTAAAGAACAGATATCCCTTGCCCAGGATCGACGATCTATTTGACCAGTTAC
AGGGAGCCAAAGTGTTCTCTAAGATTGATCTTCGGTCGGGATACCATCAGCGTAGGATTAAGGATGGTGATGTACCGAAGACAGCATTTCGTTCCAGATATGGACACTAC
GAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATCGTGTTTATTGA
TGATATCTTGATATACTCCAAGACGGAGGCCGAACATAAGGAGCATTTACGTATAGTGTCCTTTCTGGGCCACGTGGTTTCTAAGGCTGGAGTCTCTGTGGATCCAGCTA
AGATAGAGGCAGTCACCGGTTGGACCCGACCTTCCACAGTTAGTGAGGTTCGTAGCTTTCTGGGTTTAACAGGTTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATA
GCTACTCCTCTTACTCAGTTGACCAGGAAGGGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGAACCTCAAACAGAAGCTAGTTACCGCACCGGTTCT
TACTGTACCTGATGGTTCTGGCAGTTTCGTGATTTATAGTGATGCTTCCAAGAAGGGTTTGGGTTGTGTTTTGATGCAACAGGGTAAGGTGGTCGCTTATGCGTCTCGTC
AGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATTTAGAGTTGGCAGCGGTGGTTTTTGCTTTGAAAATATGGAGGCATTACTTATATGGTGAAAAGATACAGGTA
TTCACGGATCATAAGAGCTTGAAATACTTCTTTACTCCGAAAGAATTGAATATGAGACAGCGAAGATGGCTTGAGTTAGTGAAAGATTACGATTTTGAGATACTGTATCA
TCCAGGCAAGGCAAATGTGGTAGTTGATGCTCTTAGTAGAAAGGTATCACATTCATCAGCACTTATTACCCGACAGGCCCCATTGCATCGGGATTTCGAGCAGGCTGAGA
TTGCAGTGTCAGTGGGGGCAGTTACTATGCAGTTAGCCCAGTTGACGAAACGTGGCCTAGCAGAGGTAGGGCAAGCGGTTGAGTTCTCCATATCCTCTGATGGTGGACTT
TTGTTTGAGAGACGCCTCTGTGTGCCGTCAGATAGTGCGGTTAAGACAGAATTATTATCTGAGGCTCACAGTTCCCCATTCTCCATGCACCCTGGTAGTACAAAGATGTA
TCAGGACCTGAAGCGGGTTTATTGGTGGCGTAACATGAAGATGGAGGTAGCAGAATTTGTTAATAGATGCTTGGTGTGTCAGCAGGTTAAGGCACTAAGGCAGAAACCAG
CGGGTTTATTACAACCCTTGAGCATACCGGAATGGAAGTGGGAAAACGTGTCCATGGATTTCATTACAGGACTGCCGAGAACTCTGAGGGGTTTTACGTTGATTTGGGTT
GTGGTGGACAGACTTACCAAATCAGCGCACTTCGTTCCGGGTAAATCCACCTATACTGCTAGTAAGTGGGCACAGCTGTACATGTCTGAGATAGTGAGATTACACGGAGT
GCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTCTGGAAGGGTTTGCAGACGGCTATGGGAACGAGGTTAGACTTTAGTACAGCTTTCCATCCAC
AGACTGACGGTCAGACTGAGCGTCTGAACCAAGTTTTAGAGGATATGTTGCGGGCGTGTGCATTGGAATTTCCAGGTACCTGGGACTCCCACTTGCATTTGATGGAATTT
GCTTATAATAACAGTTATCAGGCTACTATTGGCATGGCACCATTTGAGGCCTTGTACGGCAAATGTTGTAGATCCTCGGTTTGCTGGGGTGAGGTGGGTGAGCAGAGATT
GATGGGCCCTGAGTTAGTTCAGTCTACTAACGAAGCGATACAGAAGATTAGATCACGCATGCATACCGCTCAGAGTAGGCAGAAGAGTTATGCAGATGTGAGGCGGAAGG
ATCTCGAATTTGAGGTAGGGGACAAGGTGTTCTTAAAGGTAGCACCTATGAGAGGTGTCTTACGATTTGAAAGGAGGGGAAAACTGAGTCCCCGTTTTGTTGGGCCGTTT
GAGATTCTGGAGCGGATTGGCCCTGTAGCTTATCGCTTGGCGTTGCCACCATCACTCTCGACAGTTCATGATGTGTTTCATGTCTCTATGTTGAGGAAGTGA

mRNA sequence

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Protein sequence

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MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRGLNKVTVKNRYPLPRIDDLFDQLQGAKVFSKIDLRSGYHQRRIKDGDVPKTAFRSRYGHY
EFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHKEHLRIVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLTGYYRRFVENFSRI
ATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQV
FTDHKSLKYFFTPKELNMRQRRWLELVKDYDFEILYHPGKANVVVDALSRKVSHSSALITRQAPLHRDFEQAEIAVSVGAVTMQLAQLTKRGLAEVGQAVEFSISSDGGL
LFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKMEVAEFVNRCLVCQQVKALRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTLIWV
VVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGTWDSHLHLMEF
AYNNSYQATIGMAPFEALYGKCCRSSVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPF
EILERIGPVAYRLALPPSLSTVHDVFHVSMLRK

Cmc08g0226101 (gene) of Melon (Charmono) v1.1 genome