; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc08g0226151 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc08g0226151
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase
Genome locationCMiso1.1chr08:17783460..17784926
RNA-Seq ExpressionCmc08g0226151
SyntenyCmc08g0226151
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR041373 - Reverse transcriptase, RNase H-like domain
IPR043128 - Reverse transcriptase/Diguanylate cyclase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035455.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]7.3e-27297.34Show/hide
Query:  MASSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDITK
        MA SELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDI K
Subjt:  MASSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDITK

Query:  TAFRTRYGHYEFRVMPFGLTNVPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLRENQLYAKFSKCEFWLKQVVFLGHVVSAKG
        TAFRTRYGHYEFRVMPFGLTN PAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLRE QLYAKFSKCEFWL+QVVFLGHVVSAKG
Subjt:  TAFRTRYGHYEFRVMPFGLTNVPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLRENQLYAKFSKCEFWLKQVVFLGHVVSAKG

Query:  VSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRRNVKFELSGKCERSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL
        VSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTR+NVKFE S KCE+SFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL
Subjt:  VSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRRNVKFELSGKCERSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL

Query:  GCVLKQDGNVIAYASRQLKEHECNYPTHYLELAAIVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADA
        GCVL QDGNVIAYASRQLKEHECNYPTH LELAA+VLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADA
Subjt:  GCVLKQDGNVIAYASRQLKEHECNYPTHYLELAAIVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADA

Query:  LSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKALEVEFELRTDGAIVKQ
        LSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKK LEVEFELRTDGAIVKQ
Subjt:  LSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKALEVEFELRTDGAIVKQ

KAA0035808.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]2.1e-279100Show/hide
Query:  MASSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDITK
        MASSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDITK
Subjt:  MASSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDITK

Query:  TAFRTRYGHYEFRVMPFGLTNVPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLRENQLYAKFSKCEFWLKQVVFLGHVVSAKG
        TAFRTRYGHYEFRVMPFGLTNVPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLRENQLYAKFSKCEFWLKQVVFLGHVVSAKG
Subjt:  TAFRTRYGHYEFRVMPFGLTNVPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLRENQLYAKFSKCEFWLKQVVFLGHVVSAKG

Query:  VSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRRNVKFELSGKCERSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL
        VSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRRNVKFELSGKCERSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL
Subjt:  VSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRRNVKFELSGKCERSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL

Query:  GCVLKQDGNVIAYASRQLKEHECNYPTHYLELAAIVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADA
        GCVLKQDGNVIAYASRQLKEHECNYPTHYLELAAIVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADA
Subjt:  GCVLKQDGNVIAYASRQLKEHECNYPTHYLELAAIVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADA

Query:  LSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKALEVEFELRTDGAIVKQ
        LSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKALEVEFELRTDGAIVKQ
Subjt:  LSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKALEVEFELRTDGAIVKQ

KAA0037582.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]7.3e-27297.34Show/hide
Query:  MASSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDITK
        MA SELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDI K
Subjt:  MASSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDITK

Query:  TAFRTRYGHYEFRVMPFGLTNVPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLRENQLYAKFSKCEFWLKQVVFLGHVVSAKG
        TAFRTRYGHYEFRVMPFGLTN PAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLRE QLYAKFSKCEFWL+QVVFLGHVVSAKG
Subjt:  TAFRTRYGHYEFRVMPFGLTNVPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLRENQLYAKFSKCEFWLKQVVFLGHVVSAKG

Query:  VSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRRNVKFELSGKCERSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL
        VSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTR+NVKFE S KCE+SFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL
Subjt:  VSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRRNVKFELSGKCERSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL

Query:  GCVLKQDGNVIAYASRQLKEHECNYPTHYLELAAIVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADA
        GCVL QDGNVIAYASRQLKEHECNYPTH LELAA+VLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADA
Subjt:  GCVLKQDGNVIAYASRQLKEHECNYPTHYLELAAIVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADA

Query:  LSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKALEVEFELRTDGAIVKQ
        LSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKK LEVEFELRTDGAIVKQ
Subjt:  LSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKALEVEFELRTDGAIVKQ

KAA0041108.1 reverse transcriptase [Cucumis melo var. makuwa]7.3e-27297.34Show/hide
Query:  MASSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDITK
        MA SELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDI K
Subjt:  MASSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDITK

Query:  TAFRTRYGHYEFRVMPFGLTNVPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLRENQLYAKFSKCEFWLKQVVFLGHVVSAKG
        TAFRTRYGHYEFRVMPFGLTN PAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLRE QLYAKFSKCEFWL+QVVFLGHVVSAKG
Subjt:  TAFRTRYGHYEFRVMPFGLTNVPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLRENQLYAKFSKCEFWLKQVVFLGHVVSAKG

Query:  VSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRRNVKFELSGKCERSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL
        VSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTR+NVKFE S KCE+SFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL
Subjt:  VSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRRNVKFELSGKCERSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL

Query:  GCVLKQDGNVIAYASRQLKEHECNYPTHYLELAAIVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADA
        GCVL QDGNVIAYASRQLKEHECNYPTH LELAA+VLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADA
Subjt:  GCVLKQDGNVIAYASRQLKEHECNYPTHYLELAAIVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADA

Query:  LSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKALEVEFELRTDGAIVKQ
        LSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKK LEVEFELRTDGAIVKQ
Subjt:  LSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKALEVEFELRTDGAIVKQ

KAA0056684.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]7.3e-27297.34Show/hide
Query:  MASSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDITK
        MA SELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDI K
Subjt:  MASSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDITK

Query:  TAFRTRYGHYEFRVMPFGLTNVPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLRENQLYAKFSKCEFWLKQVVFLGHVVSAKG
        TAFRTRYGHYEFRVMPFGLTN PAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLRE QLYAKFSKCEFWL+QVVFLGHVVSAKG
Subjt:  TAFRTRYGHYEFRVMPFGLTNVPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLRENQLYAKFSKCEFWLKQVVFLGHVVSAKG

Query:  VSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRRNVKFELSGKCERSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL
        VSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTR+NVKFE S KCE+SFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL
Subjt:  VSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRRNVKFELSGKCERSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL

Query:  GCVLKQDGNVIAYASRQLKEHECNYPTHYLELAAIVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADA
        GCVL QDGNVIAYASRQLKEHECNYPTH LELAA+VLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADA
Subjt:  GCVLKQDGNVIAYASRQLKEHECNYPTHYLELAAIVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADA

Query:  LSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKALEVEFELRTDGAIVKQ
        LSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKK LEVEFELRTDGAIVKQ
Subjt:  LSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKALEVEFELRTDGAIVKQ

TrEMBL top hitse value%identityAlignment
A0A5A7SZ16 Reverse transcriptase1.0e-279100Show/hide
Query:  MASSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDITK
        MASSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDITK
Subjt:  MASSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDITK

Query:  TAFRTRYGHYEFRVMPFGLTNVPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLRENQLYAKFSKCEFWLKQVVFLGHVVSAKG
        TAFRTRYGHYEFRVMPFGLTNVPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLRENQLYAKFSKCEFWLKQVVFLGHVVSAKG
Subjt:  TAFRTRYGHYEFRVMPFGLTNVPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLRENQLYAKFSKCEFWLKQVVFLGHVVSAKG

Query:  VSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRRNVKFELSGKCERSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL
        VSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRRNVKFELSGKCERSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL
Subjt:  VSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRRNVKFELSGKCERSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL

Query:  GCVLKQDGNVIAYASRQLKEHECNYPTHYLELAAIVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADA
        GCVLKQDGNVIAYASRQLKEHECNYPTHYLELAAIVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADA
Subjt:  GCVLKQDGNVIAYASRQLKEHECNYPTHYLELAAIVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADA

Query:  LSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKALEVEFELRTDGAIVKQ
        LSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKALEVEFELRTDGAIVKQ
Subjt:  LSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKALEVEFELRTDGAIVKQ

A0A5A7T1Y5 Reverse transcriptase3.5e-27297.34Show/hide
Query:  MASSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDITK
        MA SELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDI K
Subjt:  MASSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDITK

Query:  TAFRTRYGHYEFRVMPFGLTNVPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLRENQLYAKFSKCEFWLKQVVFLGHVVSAKG
        TAFRTRYGHYEFRVMPFGLTN PAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLRE QLYAKFSKCEFWL+QVVFLGHVVSAKG
Subjt:  TAFRTRYGHYEFRVMPFGLTNVPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLRENQLYAKFSKCEFWLKQVVFLGHVVSAKG

Query:  VSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRRNVKFELSGKCERSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL
        VSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTR+NVKFE S KCE+SFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL
Subjt:  VSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRRNVKFELSGKCERSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL

Query:  GCVLKQDGNVIAYASRQLKEHECNYPTHYLELAAIVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADA
        GCVL QDGNVIAYASRQLKEHECNYPTH LELAA+VLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADA
Subjt:  GCVLKQDGNVIAYASRQLKEHECNYPTHYLELAAIVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADA

Query:  LSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKALEVEFELRTDGAIVKQ
        LSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKK LEVEFELRTDGAIVKQ
Subjt:  LSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKALEVEFELRTDGAIVKQ

A0A5A7U2V7 Reverse transcriptase3.5e-27297.34Show/hide
Query:  MASSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDITK
        MA SELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDI K
Subjt:  MASSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDITK

Query:  TAFRTRYGHYEFRVMPFGLTNVPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLRENQLYAKFSKCEFWLKQVVFLGHVVSAKG
        TAFRTRYGHYEFRVMPFGLTN PAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLRE QLYAKFSKCEFWL+QVVFLGHVVSAKG
Subjt:  TAFRTRYGHYEFRVMPFGLTNVPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLRENQLYAKFSKCEFWLKQVVFLGHVVSAKG

Query:  VSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRRNVKFELSGKCERSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL
        VSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTR+NVKFE S KCE+SFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL
Subjt:  VSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRRNVKFELSGKCERSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL

Query:  GCVLKQDGNVIAYASRQLKEHECNYPTHYLELAAIVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADA
        GCVL QDGNVIAYASRQLKEHECNYPTH LELAA+VLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADA
Subjt:  GCVLKQDGNVIAYASRQLKEHECNYPTHYLELAAIVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADA

Query:  LSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKALEVEFELRTDGAIVKQ
        LSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKK LEVEFELRTDGAIVKQ
Subjt:  LSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKALEVEFELRTDGAIVKQ

A0A5A7UUL6 Reverse transcriptase3.5e-27297.34Show/hide
Query:  MASSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDITK
        MA SELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDI K
Subjt:  MASSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDITK

Query:  TAFRTRYGHYEFRVMPFGLTNVPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLRENQLYAKFSKCEFWLKQVVFLGHVVSAKG
        TAFRTRYGHYEFRVMPFGLTN PAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLRE QLYAKFSKCEFWL+QVVFLGHVVSAKG
Subjt:  TAFRTRYGHYEFRVMPFGLTNVPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLRENQLYAKFSKCEFWLKQVVFLGHVVSAKG

Query:  VSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRRNVKFELSGKCERSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL
        VSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTR+NVKFE S KCE+SFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL
Subjt:  VSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRRNVKFELSGKCERSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL

Query:  GCVLKQDGNVIAYASRQLKEHECNYPTHYLELAAIVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADA
        GCVL QDGNVIAYASRQLKEHECNYPTH LELAA+VLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADA
Subjt:  GCVLKQDGNVIAYASRQLKEHECNYPTHYLELAAIVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADA

Query:  LSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKALEVEFELRTDGAIVKQ
        LSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKK LEVEFELRTDGAIVKQ
Subjt:  LSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKALEVEFELRTDGAIVKQ

A0A5D3BHI1 Reverse transcriptase3.5e-27297.34Show/hide
Query:  MASSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDITK
        MA SELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDI K
Subjt:  MASSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDITK

Query:  TAFRTRYGHYEFRVMPFGLTNVPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLRENQLYAKFSKCEFWLKQVVFLGHVVSAKG
        TAFRTRYGHYEFRVMPFGLTN PAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLRE QLYAKFSKCEFWL+QVVFLGHVVSAKG
Subjt:  TAFRTRYGHYEFRVMPFGLTNVPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLRENQLYAKFSKCEFWLKQVVFLGHVVSAKG

Query:  VSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRRNVKFELSGKCERSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL
        VSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTR+NVKFE S KCE+SFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL
Subjt:  VSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRRNVKFELSGKCERSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL

Query:  GCVLKQDGNVIAYASRQLKEHECNYPTHYLELAAIVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADA
        GCVL QDGNVIAYASRQLKEHECNYPTH LELAA+VLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADA
Subjt:  GCVLKQDGNVIAYASRQLKEHECNYPTHYLELAAIVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADA

Query:  LSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKALEVEFELRTDGAIVKQ
        LSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKK LEVEFELRTDGAIVKQ
Subjt:  LSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKALEVEFELRTDGAIVKQ

SwissProt top hitse value%identityAlignment
P04323 Retrovirus-related Pol polyprotein from transposon 17.64.7e-8839.21Show/hide
Query:  KELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGT-----LRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDITKT
        +E++ Q+Q+++++G IR S SP+ +P+  V KK         R+ IDYR+LN++T+ +++P+P +D++  +L     F+ IDL  G+HQ+++    ++KT
Subjt:  KELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGT-----LRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDITKT

Query:  AFRTRYGHYEFRVMPFGLTNVPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLRENQLYAKFSKCEFWLKQVVFLGHVVSAKGV
        AF T++GHYE+  MPFGL N PA F   MN I    L++  +V++DDI+V+S   + H + L +V + L +  L  +  KCEF  ++  FLGHV++  G+
Subjt:  AFRTRYGHYEFRVMPFGLTNVPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLRENQLYAKFSKCEFWLKQVVFLGHVVSAKGV

Query:  SVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRRNVKFELSG-KCERSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL
          +P+K+EA+  +  P    E+++FLGL GYYR+FI +F+ +A P+T   ++N+K + +  + + +F++LK  +   PIL +P   K + +  DAS + L
Subjt:  SVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRRNVKFELSG-KCERSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL

Query:  GCVLKQDGNVIAYASRQLKEHECNYPTHYLELAAIVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADA
        G VL QDG+ ++Y SR L EHE NY T   EL AIV A K +RHYL G    I +DH+ L +++  K+ N +  RW   + ++D  I+Y  GK N VADA
Subjt:  GCVLKQDGNVIAYASRQLKEHECNYPTHYLELAAIVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADA

Query:  LSR
        LSR
Subjt:  LSR

P20825 Retrovirus-related Pol polyprotein from transposon 2975.2e-8740.24Show/hide
Query:  MASSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKD-----GTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRE
        +A +   E++ Q+QE++++G IR S SP+ +P   V KK         R+ IDYR+LN++TI ++YP+P +D++  +L     F+ IDL  G+HQ+++ E
Subjt:  MASSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKD-----GTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRE

Query:  SDITKTAFRTRYGHYEFRVMPFGLTNVPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLRENQLYAKFSKCEFWLKQVVFLGHV
          I+KTAF T+ GHYE+  MPFGL N PA F   MN I    L++  +V++DDI+++S     H   +++V   L +  L  +  KCEF  K+  FLGH+
Subjt:  SDITKTAFRTRYGHYEFRVMPFGLTNVPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLRENQLYAKFSKCEFWLKQVVFLGHV

Query:  VSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRRNVKFELSGKCE--RSFQELKKRLVTAPILALPVTGKDYVIYC
        V+  G+  +P KV+A+V++  P    E+R+FLGL GYYR+FI +++ +A P+T+  ++  K + + K E   +F++LK  ++  PIL LP   K +V+  
Subjt:  VSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRRNVKFELSGKCE--RSFQELKKRLVTAPILALPVTGKDYVIYC

Query:  DASRLGLGCVLKQDGNVIAYASRQLKEHECNYPTHYLELAAIVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGK
        DAS L LG VL Q+G+ I++ SR L +HE NY     EL AIV A K +RHYL G +  I +DH+ L+++ + KE   +  RW   + +Y   I+Y  GK
Subjt:  DASRLGLGCVLKQDGNVIAYASRQLKEHECNYPTHYLELAAIVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGK

Query:  ANVVADALSR
         N VADALSR
Subjt:  ANVVADALSR

Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein3.2e-7639.6Show/hide
Query:  KELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDITKTAFRTR
        +E+   +Q+L+D  +I PS SP  +PV+ V KKDGT RLC+DYR LNK TI + +PLPRID+L  ++  A +F+ +DL SGYHQ+ +   D  KTAF T 
Subjt:  KELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDITKTAFRTR

Query:  YGHYEFRVMPFGLTNVPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLRENQLYAKFSKCEFWLKQVVFLGHVVSAKGVSVDPQ
         G YE+ VMPFGL N P+ F   M   F     +FV V++DDIL++S   E H +HL  VL+ L+   L  K  KC+F  ++  FLG+ +  + ++    
Subjt:  YGHYEFRVMPFGLTNVPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLRENQLYAKFSKCEFWLKQVVFLGHVVSAKGVSVDPQ

Query:  KVEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRRNVKFELSGKCERSFQELKKRLVTAPILALPVTGK-DYVIYCDASRLGLGCVLK
        K  A+ ++  P +  + + FLG+  YYRRFI + S++A P+        K + + K +++ ++LK  L  +P+L +P   K +Y +  DAS+ G+G VL+
Subjt:  KVEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRRNVKFELSGKCERSFQELKKRLVTAPILALPVTGK-DYVIYCDASRLGLGCVLK

Query:  QDGN------VIAYASRQLKEHECNYPTHYLELAAIVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVAD
        +  N      V+ Y S+ L+  + NYP   LEL  I+ AL  +R+ L G+   + TDH SL  + ++ E   R +RWL+ +  YD T+EY  G  NVVAD
Subjt:  QDGN------VIAYASRQLKEHECNYPTHYLELAAIVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVAD

Query:  ALSR
        A+SR
Subjt:  ALSR

Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus2.0e-8340.53Show/hide
Query:  ELKMQLQELVDKGYIRPSVSPWGAPVLFVKKK-----DGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDITKTA
        E++ Q+ EL+  G IRPS SP+ +P+  V KK     +   R+ +D+++LN VTI + YP+P I+     L  A  F+ +DL SG+HQ+ ++ESDI KTA
Subjt:  ELKMQLQELVDKGYIRPSVSPWGAPVLFVKKK-----DGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDITKTA

Query:  FRTRYGHYEFRVMPFGLTNVPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLRENQLYAKFSKCEFWLKQVVFLGHVVSAKGVS
        F T  G YEF  +PFGL N PA+F  +++ I   ++ +   V+IDDI+V+S D ++H ++LR+VL +L +  L     K  F   QV FLG++V+A G+ 
Subjt:  FRTRYGHYEFRVMPFGLTNVPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLRENQLYAKFSKCEFWLKQVVFLGHVVSAKGVS

Query:  VDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTR---RNVKFELSGKCE--------RSFQELKKRLVTAPILALPVTGKDYVI
         DP+KV A+     P S  E++ FLG+  YYR+FI+D++++A PLT LTR    N+K   S K          +SF +LK  L ++ ILA P   K + +
Subjt:  VDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTR---RNVKFELSGKCE--------RSFQELKKRLVTAPILALPVTGKDYVI

Query:  YCDASRLGLGCVLKQD----GNVIAYASRQLKEHECNYPTHYLELAAIVLALKIWRHYLFGE-KCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCT
          DAS   +G VL QD       IAY SR L + E NY T   E+ AI+ +L   R YL+G     ++TDH+ L +    +  N + +RW   I++Y+C 
Subjt:  YCDASRLGLGCVLKQD----GNVIAYASRQLKEHECNYPTHYLELAAIVLALKIWRHYLFGE-KCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCT

Query:  IEYHPGKANVVADALSR
        + Y PGK+NVVADALSR
Subjt:  IEYHPGKANVVADALSR

Q99315 Transposon Ty3-G Gag-Pol polyprotein5.4e-7639.6Show/hide
Query:  KELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDITKTAFRTR
        +E+   +Q+L+D  +I PS SP  +PV+ V KKDGT RLC+DYR LNK TI + +PLPRID+L  ++  A +F+ +DL SGYHQ+ +   D  KTAF T 
Subjt:  KELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDITKTAFRTR

Query:  YGHYEFRVMPFGLTNVPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLRENQLYAKFSKCEFWLKQVVFLGHVVSAKGVSVDPQ
         G YE+ VMPFGL N P+ F   M   F     +FV V++DDIL++S   E H +HL  VL+ L+   L  K  KC+F  ++  FLG+ +  + ++    
Subjt:  YGHYEFRVMPFGLTNVPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLRENQLYAKFSKCEFWLKQVVFLGHVVSAKGVSVDPQ

Query:  KVEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRRNVKFELSGKCERSFQELKKRLVTAPILALPVTGK-DYVIYCDASRLGLGCVLK
        K  A+ ++  P +  + + FLG+  YYRRFI + S++A P+        K + + K +++  +LK  L  +P+L +P   K +Y +  DAS+ G+G VL+
Subjt:  KVEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRRNVKFELSGKCERSFQELKKRLVTAPILALPVTGK-DYVIYCDASRLGLGCVLK

Query:  QDGN------VIAYASRQLKEHECNYPTHYLELAAIVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVAD
        +  N      V+ Y S+ L+  + NYP   LEL  I+ AL  +R+ L G+   + TDH SL  + ++ E   R +RWL+ +  YD T+EY  G  NVVAD
Subjt:  QDGN------VIAYASRQLKEHECNYPTHYLELAAIVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVAD

Query:  ALSR
        A+SR
Subjt:  ALSR

Arabidopsis top hitse value%identityAlignment
ATMG00860.1 DNA/RNA polymerases superfamily protein1.3e-2443.55Show/hide
Query:  HLRIVLQTLRENQLYAKFSKCEFWLKQVVFLG--HVVSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRRNVKFEL
        HL +VLQ   ++Q YA   KC F   Q+ +LG  H++S +GVS DP K+EA+V W  P + TE+R FLGL GYYRRF++++ ++  PLT L ++N   + 
Subjt:  HLRIVLQTLRENQLYAKFSKCEFWLKQVVFLG--HVVSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRRNVKFEL

Query:  SGKCERSFQELKKRLVTAPILALP
        +     +F+ LK  + T P+LALP
Subjt:  SGKCERSFQELKKRLVTAPILALP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCAAGCGAGCTAAAAGAATTGAAGATGCAGTTACAAGAACTAGTTGACAAGGGATACATCAGGCCTAGTGTTTCGCCGTGGGGAGCACCAGTGCTTTTTGTTAA
AAAGAAAGATGGTACCCTCAGATTATGTATTGACTATAGACAGTTAAACAAGGTTACAATACGTAACAAGTATCCTTTACCACGCATCGATGACTTATTTGATCAACTAA
GGGGAGCAGCGTTGTTCTCTAAGATTGACTTAAGGTCAGGATACCACCAGTTGAAGGTTAGAGAATCAGATATTACTAAGACAGCATTTAGAACGAGGTATGGGCATTAT
GAGTTTCGAGTTATGCCATTCGGTTTAACGAATGTGCCAGCGGTTTTCATGGATCTCATGAACAGGATCTTCCATCGGTATTTAGATCAGTTTGTGATTGTGTTCATTGA
TGATATATTAGTTTACTCAGTTGACAGAGAATCTCATGAGGAACATCTGAGGATTGTTCTACAGACTCTACGTGAAAACCAGTTATACGCTAAGTTCAGCAAATGTGAGT
TCTGGTTGAAACAAGTAGTATTTTTGGGGCATGTAGTTTCAGCAAAAGGAGTTAGTGTCGATCCACAAAAAGTAGAAGCAGTTGTCAATTGGGAAAGACCAATTAGTGCG
ACAGAAGTACGTAGTTTCCTGGGTTTGGCAGGATACTATAGGCGTTTTATTGAGGATTTCTCTCGATTGGCATTGCCTTTGACCGCTTTGACAAGGAGGAATGTTAAGTT
TGAGTTGTCAGGTAAATGCGAGCGAAGTTTTCAGGAATTGAAGAAAAGACTAGTTACAGCACCTATTTTGGCACTTCCTGTAACAGGGAAGGACTATGTGATTTATTGTG
ATGCTTCAAGGCTAGGATTAGGTTGTGTGCTTAAGCAAGATGGGAATGTAATAGCTTATGCTTCAAGGCAGTTGAAGGAGCATGAGTGTAATTACCCTACCCATTATCTT
GAGCTAGCAGCAATTGTTTTAGCACTAAAAATCTGGAGACACTATTTGTTCGGGGAAAAGTGCCATATTTTCACAGATCATAAAAGTCTGAAGTATATTTTTGATCAAAA
AGAGCTAAATCTGAGACAAAGGCGATGGCTAGAACTGATTAAAGATTATGATTGTACTATAGAGTATCATCCAGGTAAGGCCAACGTAGTAGCAGATGCATTAAGTAGGA
AGTCAAGACTTCCGAAGAGTGCCTTGTGTGGTATTCGAGTAGCTTTGTTGAATGAGTTAAGAGGTTCCAAGGCAGTAGTAACTACAGAGGATTCAGGAAGTCTCTTAGCT
CAATTTCAGGTTCGGTCTTCTCTAGTAACTGAGATTGTAAGAAGACAGTCAGAAGACAGTAATTTACAGAAGAAGTTTGAGAAATCCAAGAAAGCCTTAGAGGTGGAGTT
TGAGCTGAGAACAGATGGAGCCATTGTTAAACAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCAAGCGAGCTAAAAGAATTGAAGATGCAGTTACAAGAACTAGTTGACAAGGGATACATCAGGCCTAGTGTTTCGCCGTGGGGAGCACCAGTGCTTTTTGTTAA
AAAGAAAGATGGTACCCTCAGATTATGTATTGACTATAGACAGTTAAACAAGGTTACAATACGTAACAAGTATCCTTTACCACGCATCGATGACTTATTTGATCAACTAA
GGGGAGCAGCGTTGTTCTCTAAGATTGACTTAAGGTCAGGATACCACCAGTTGAAGGTTAGAGAATCAGATATTACTAAGACAGCATTTAGAACGAGGTATGGGCATTAT
GAGTTTCGAGTTATGCCATTCGGTTTAACGAATGTGCCAGCGGTTTTCATGGATCTCATGAACAGGATCTTCCATCGGTATTTAGATCAGTTTGTGATTGTGTTCATTGA
TGATATATTAGTTTACTCAGTTGACAGAGAATCTCATGAGGAACATCTGAGGATTGTTCTACAGACTCTACGTGAAAACCAGTTATACGCTAAGTTCAGCAAATGTGAGT
TCTGGTTGAAACAAGTAGTATTTTTGGGGCATGTAGTTTCAGCAAAAGGAGTTAGTGTCGATCCACAAAAAGTAGAAGCAGTTGTCAATTGGGAAAGACCAATTAGTGCG
ACAGAAGTACGTAGTTTCCTGGGTTTGGCAGGATACTATAGGCGTTTTATTGAGGATTTCTCTCGATTGGCATTGCCTTTGACCGCTTTGACAAGGAGGAATGTTAAGTT
TGAGTTGTCAGGTAAATGCGAGCGAAGTTTTCAGGAATTGAAGAAAAGACTAGTTACAGCACCTATTTTGGCACTTCCTGTAACAGGGAAGGACTATGTGATTTATTGTG
ATGCTTCAAGGCTAGGATTAGGTTGTGTGCTTAAGCAAGATGGGAATGTAATAGCTTATGCTTCAAGGCAGTTGAAGGAGCATGAGTGTAATTACCCTACCCATTATCTT
GAGCTAGCAGCAATTGTTTTAGCACTAAAAATCTGGAGACACTATTTGTTCGGGGAAAAGTGCCATATTTTCACAGATCATAAAAGTCTGAAGTATATTTTTGATCAAAA
AGAGCTAAATCTGAGACAAAGGCGATGGCTAGAACTGATTAAAGATTATGATTGTACTATAGAGTATCATCCAGGTAAGGCCAACGTAGTAGCAGATGCATTAAGTAGGA
AGTCAAGACTTCCGAAGAGTGCCTTGTGTGGTATTCGAGTAGCTTTGTTGAATGAGTTAAGAGGTTCCAAGGCAGTAGTAACTACAGAGGATTCAGGAAGTCTCTTAGCT
CAATTTCAGGTTCGGTCTTCTCTAGTAACTGAGATTGTAAGAAGACAGTCAGAAGACAGTAATTTACAGAAGAAGTTTGAGAAATCCAAGAAAGCCTTAGAGGTGGAGTT
TGAGCTGAGAACAGATGGAGCCATTGTTAAACAATGA
Protein sequenceShow/hide protein sequence
MASSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDITKTAFRTRYGHY
EFRVMPFGLTNVPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLRENQLYAKFSKCEFWLKQVVFLGHVVSAKGVSVDPQKVEAVVNWERPISA
TEVRSFLGLAGYYRRFIEDFSRLALPLTALTRRNVKFELSGKCERSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLKQDGNVIAYASRQLKEHECNYPTHYL
ELAAIVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLA
QFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKALEVEFELRTDGAIVKQ