| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0031437.1 pol protein [Cucumis melo var. makuwa] | 1.2e-98 | 83.64 | Show/hide |
Query: MLDVTLLVLDMQDFDVILGMDWLSANHASIDCVHKEVVFNPPSNASFKFKRAEII----LYTRLKASKLLSQGTWSILASVLDTRELEVSLSFEPVVWEY
MLDVTLLVLDMQDFDVILGMDWLSANHA+IDC KEVVFNPPS ASFKF+ A ++ + + +KASKLLSQGTW ILASV+D RE EVSLS EPVV EY
Subjt: MLDVTLLVLDMQDFDVILGMDWLSANHASIDCVHKEVVFNPPSNASFKFKRAEII----LYTRLKASKLLSQGTWSILASVLDTRELEVSLSFEPVVWEY
Query: PDVFPGELPGLPPPKEIDFTIQLESGTAPISRVPYRMAPAELKELKVQLQELLDKGFIRPSVSPWDAPVLFVKKKDGSMRLCIDYRELNKMTIKNQYPLP
PDVFP ELPGLPPP+E+DF I+LE GTAPISR PYRMAPAELKELKVQLQELLDKGFIRPSVSPW APVLFVKKKDGSMRLCIDYRELNK+T+KN+YPLP
Subjt: PDVFPGELPGLPPPKEIDFTIQLESGTAPISRVPYRMAPAELKELKVQLQELLDKGFIRPSVSPWDAPVLFVKKKDGSMRLCIDYRELNKMTIKNQYPLP
Query: KIDDLFDQLQGATVFSKIDL
+IDDLFDQLQGATVFSKIDL
Subjt: KIDDLFDQLQGATVFSKIDL
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| KAA0033825.1 pol protein [Cucumis melo var. makuwa] | 1.2e-98 | 83.64 | Show/hide |
Query: MLDVTLLVLDMQDFDVILGMDWLSANHASIDCVHKEVVFNPPSNASFKFKRAEII----LYTRLKASKLLSQGTWSILASVLDTRELEVSLSFEPVVWEY
MLDVTLLVLDMQDFDVILGMDWLSANHA+IDC KEVVFNPPS ASFKF+ A ++ + + +KASKLLSQGTW ILASV+D RE EVSLS EPVV EY
Subjt: MLDVTLLVLDMQDFDVILGMDWLSANHASIDCVHKEVVFNPPSNASFKFKRAEII----LYTRLKASKLLSQGTWSILASVLDTRELEVSLSFEPVVWEY
Query: PDVFPGELPGLPPPKEIDFTIQLESGTAPISRVPYRMAPAELKELKVQLQELLDKGFIRPSVSPWDAPVLFVKKKDGSMRLCIDYRELNKMTIKNQYPLP
PDVFP ELPGLPPP+E+DF I+LE GTAPISR PYRMAPAELKELKVQLQELLDKGFIRPSVSPW APVLFVKKKDGSMRLCIDYRELNK+T+KN+YPLP
Subjt: PDVFPGELPGLPPPKEIDFTIQLESGTAPISRVPYRMAPAELKELKVQLQELLDKGFIRPSVSPWDAPVLFVKKKDGSMRLCIDYRELNKMTIKNQYPLP
Query: KIDDLFDQLQGATVFSKIDL
+IDDLFDQLQGATVFSKIDL
Subjt: KIDDLFDQLQGATVFSKIDL
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| KAA0035799.1 retrotransposon protein, putative, Ty3-gypsy subclass [Cucumis melo var. makuwa] | 1.5e-104 | 100 | Show/hide |
Query: MLDVTLLVLDMQDFDVILGMDWLSANHASIDCVHKEVVFNPPSNASFKFKRAEIILYTRLKASKLLSQGTWSILASVLDTRELEVSLSFEPVVWEYPDVF
MLDVTLLVLDMQDFDVILGMDWLSANHASIDCVHKEVVFNPPSNASFKFKRAEIILYTRLKASKLLSQGTWSILASVLDTRELEVSLSFEPVVWEYPDVF
Subjt: MLDVTLLVLDMQDFDVILGMDWLSANHASIDCVHKEVVFNPPSNASFKFKRAEIILYTRLKASKLLSQGTWSILASVLDTRELEVSLSFEPVVWEYPDVF
Query: PGELPGLPPPKEIDFTIQLESGTAPISRVPYRMAPAELKELKVQLQELLDKGFIRPSVSPWDAPVLFVKKKDGSMRLCIDYRELNKMTIKNQY
PGELPGLPPPKEIDFTIQLESGTAPISRVPYRMAPAELKELKVQLQELLDKGFIRPSVSPWDAPVLFVKKKDGSMRLCIDYRELNKMTIKNQY
Subjt: PGELPGLPPPKEIDFTIQLESGTAPISRVPYRMAPAELKELKVQLQELLDKGFIRPSVSPWDAPVLFVKKKDGSMRLCIDYRELNKMTIKNQY
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| KAA0058812.1 pol protein [Cucumis melo var. makuwa] | 5.6e-99 | 84.55 | Show/hide |
Query: MLDVTLLVLDMQDFDVILGMDWLSANHASIDCVHKEVVFNPPSNASFKFKRAEII----LYTRLKASKLLSQGTWSILASVLDTRELEVSLSFEPVVWEY
MLDVTLLVLDMQDFDVILGMDWLSANHA+IDC KEVVFNPPS ASFKF+ A I+ + + +KASKLLSQGTW ILASV+D RE EVSLS EPVV EY
Subjt: MLDVTLLVLDMQDFDVILGMDWLSANHASIDCVHKEVVFNPPSNASFKFKRAEII----LYTRLKASKLLSQGTWSILASVLDTRELEVSLSFEPVVWEY
Query: PDVFPGELPGLPPPKEIDFTIQLESGTAPISRVPYRMAPAELKELKVQLQELLDKGFIRPSVSPWDAPVLFVKKKDGSMRLCIDYRELNKMTIKNQYPLP
PDVFP ELPGLPPP+E+DF I+LE GTAPISR PYRMAPAELKELKVQLQELLDKGFIRPSVSPW APVLFVKKKDGSMRLCIDYRELNK+TIKN+YPLP
Subjt: PDVFPGELPGLPPPKEIDFTIQLESGTAPISRVPYRMAPAELKELKVQLQELLDKGFIRPSVSPWDAPVLFVKKKDGSMRLCIDYRELNKMTIKNQYPLP
Query: KIDDLFDQLQGATVFSKIDL
+IDDLFDQLQGATVFSKIDL
Subjt: KIDDLFDQLQGATVFSKIDL
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| KAA0060745.1 pol protein [Cucumis melo var. makuwa] | 7.3e-99 | 84.09 | Show/hide |
Query: MLDVTLLVLDMQDFDVILGMDWLSANHASIDCVHKEVVFNPPSNASFKFKRAEII----LYTRLKASKLLSQGTWSILASVLDTRELEVSLSFEPVVWEY
MLDVTLLVLDMQDFDVILGMDWLSANHA+IDC KEVVFNPPS ASFKF+ A ++ + + +KASKLLSQGTW ILASV+D RE EVSLS EPVV EY
Subjt: MLDVTLLVLDMQDFDVILGMDWLSANHASIDCVHKEVVFNPPSNASFKFKRAEII----LYTRLKASKLLSQGTWSILASVLDTRELEVSLSFEPVVWEY
Query: PDVFPGELPGLPPPKEIDFTIQLESGTAPISRVPYRMAPAELKELKVQLQELLDKGFIRPSVSPWDAPVLFVKKKDGSMRLCIDYRELNKMTIKNQYPLP
PDVFP ELPGLPPP+E+DF I+LE GTAPISR PYRMAPAELKELKVQLQELLDKGFIRPSVSPW APVLFVKKKDGSMRLCIDYRELNK+T+KN+YPLP
Subjt: PDVFPGELPGLPPPKEIDFTIQLESGTAPISRVPYRMAPAELKELKVQLQELLDKGFIRPSVSPWDAPVLFVKKKDGSMRLCIDYRELNKMTIKNQYPLP
Query: KIDDLFDQLQGATVFSKIDL
KIDDLFDQLQGATVFSKIDL
Subjt: KIDDLFDQLQGATVFSKIDL
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7T334 Retrotransposon protein, putative, Ty3-gypsy subclass | 7.4e-105 | 100 | Show/hide |
Query: MLDVTLLVLDMQDFDVILGMDWLSANHASIDCVHKEVVFNPPSNASFKFKRAEIILYTRLKASKLLSQGTWSILASVLDTRELEVSLSFEPVVWEYPDVF
MLDVTLLVLDMQDFDVILGMDWLSANHASIDCVHKEVVFNPPSNASFKFKRAEIILYTRLKASKLLSQGTWSILASVLDTRELEVSLSFEPVVWEYPDVF
Subjt: MLDVTLLVLDMQDFDVILGMDWLSANHASIDCVHKEVVFNPPSNASFKFKRAEIILYTRLKASKLLSQGTWSILASVLDTRELEVSLSFEPVVWEYPDVF
Query: PGELPGLPPPKEIDFTIQLESGTAPISRVPYRMAPAELKELKVQLQELLDKGFIRPSVSPWDAPVLFVKKKDGSMRLCIDYRELNKMTIKNQY
PGELPGLPPPKEIDFTIQLESGTAPISRVPYRMAPAELKELKVQLQELLDKGFIRPSVSPWDAPVLFVKKKDGSMRLCIDYRELNKMTIKNQY
Subjt: PGELPGLPPPKEIDFTIQLESGTAPISRVPYRMAPAELKELKVQLQELLDKGFIRPSVSPWDAPVLFVKKKDGSMRLCIDYRELNKMTIKNQY
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| A0A5A7UBS1 Reverse transcriptase | 6.0e-99 | 83.64 | Show/hide |
Query: MLDVTLLVLDMQDFDVILGMDWLSANHASIDCVHKEVVFNPPSNASFKFKRAEII----LYTRLKASKLLSQGTWSILASVLDTRELEVSLSFEPVVWEY
MLDVTLLVLDMQDFDVILGMDWLSANHA+IDC KEVVFNPPS ASFKF+ A ++ + + +KASKLLSQGTW ILASV+D RE EVSLS EPVV EY
Subjt: MLDVTLLVLDMQDFDVILGMDWLSANHASIDCVHKEVVFNPPSNASFKFKRAEII----LYTRLKASKLLSQGTWSILASVLDTRELEVSLSFEPVVWEY
Query: PDVFPGELPGLPPPKEIDFTIQLESGTAPISRVPYRMAPAELKELKVQLQELLDKGFIRPSVSPWDAPVLFVKKKDGSMRLCIDYRELNKMTIKNQYPLP
PDVFP ELPGLPPP+E+DF I+LE GTAPISR PYRMAPAELKELKVQLQELLDKGFIRPSVSPW APVLFVKKKDGSMRLCIDYRELNK+T+KN+YPLP
Subjt: PDVFPGELPGLPPPKEIDFTIQLESGTAPISRVPYRMAPAELKELKVQLQELLDKGFIRPSVSPWDAPVLFVKKKDGSMRLCIDYRELNKMTIKNQYPLP
Query: KIDDLFDQLQGATVFSKIDL
+IDDLFDQLQGATVFSKIDL
Subjt: KIDDLFDQLQGATVFSKIDL
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| A0A5A7USG7 Reverse transcriptase | 2.7e-99 | 84.55 | Show/hide |
Query: MLDVTLLVLDMQDFDVILGMDWLSANHASIDCVHKEVVFNPPSNASFKFKRAEII----LYTRLKASKLLSQGTWSILASVLDTRELEVSLSFEPVVWEY
MLDVTLLVLDMQDFDVILGMDWLSANHA+IDC KEVVFNPPS ASFKF+ A I+ + + +KASKLLSQGTW ILASV+D RE EVSLS EPVV EY
Subjt: MLDVTLLVLDMQDFDVILGMDWLSANHASIDCVHKEVVFNPPSNASFKFKRAEII----LYTRLKASKLLSQGTWSILASVLDTRELEVSLSFEPVVWEY
Query: PDVFPGELPGLPPPKEIDFTIQLESGTAPISRVPYRMAPAELKELKVQLQELLDKGFIRPSVSPWDAPVLFVKKKDGSMRLCIDYRELNKMTIKNQYPLP
PDVFP ELPGLPPP+E+DF I+LE GTAPISR PYRMAPAELKELKVQLQELLDKGFIRPSVSPW APVLFVKKKDGSMRLCIDYRELNK+TIKN+YPLP
Subjt: PDVFPGELPGLPPPKEIDFTIQLESGTAPISRVPYRMAPAELKELKVQLQELLDKGFIRPSVSPWDAPVLFVKKKDGSMRLCIDYRELNKMTIKNQYPLP
Query: KIDDLFDQLQGATVFSKIDL
+IDDLFDQLQGATVFSKIDL
Subjt: KIDDLFDQLQGATVFSKIDL
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| A0A5A7V4E4 Reverse transcriptase | 3.5e-99 | 84.09 | Show/hide |
Query: MLDVTLLVLDMQDFDVILGMDWLSANHASIDCVHKEVVFNPPSNASFKFKRAEII----LYTRLKASKLLSQGTWSILASVLDTRELEVSLSFEPVVWEY
MLDVTLLVLDMQDFDVILGMDWLSANHA+IDC KEVVFNPPS ASFKF+ A ++ + + +KASKLLSQGTW ILASV+D RE EVSLS EPVV EY
Subjt: MLDVTLLVLDMQDFDVILGMDWLSANHASIDCVHKEVVFNPPSNASFKFKRAEII----LYTRLKASKLLSQGTWSILASVLDTRELEVSLSFEPVVWEY
Query: PDVFPGELPGLPPPKEIDFTIQLESGTAPISRVPYRMAPAELKELKVQLQELLDKGFIRPSVSPWDAPVLFVKKKDGSMRLCIDYRELNKMTIKNQYPLP
PDVFP ELPGLPPP+E+DF I+LE GTAPISR PYRMAPAELKELKVQLQELLDKGFIRPSVSPW APVLFVKKKDGSMRLCIDYRELNK+T+KN+YPLP
Subjt: PDVFPGELPGLPPPKEIDFTIQLESGTAPISRVPYRMAPAELKELKVQLQELLDKGFIRPSVSPWDAPVLFVKKKDGSMRLCIDYRELNKMTIKNQYPLP
Query: KIDDLFDQLQGATVFSKIDL
KIDDLFDQLQGATVFSKIDL
Subjt: KIDDLFDQLQGATVFSKIDL
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| A0A5D3CQB5 Reverse transcriptase | 6.0e-99 | 83.64 | Show/hide |
Query: MLDVTLLVLDMQDFDVILGMDWLSANHASIDCVHKEVVFNPPSNASFKFKRAEII----LYTRLKASKLLSQGTWSILASVLDTRELEVSLSFEPVVWEY
MLDVTLLVLDMQDFDVILGMDWLSANHA+IDC KEVVFNPPS ASFKF+ A ++ + + +KASKLLSQGTW ILASV+D RE EVSLS EPVV EY
Subjt: MLDVTLLVLDMQDFDVILGMDWLSANHASIDCVHKEVVFNPPSNASFKFKRAEII----LYTRLKASKLLSQGTWSILASVLDTRELEVSLSFEPVVWEY
Query: PDVFPGELPGLPPPKEIDFTIQLESGTAPISRVPYRMAPAELKELKVQLQELLDKGFIRPSVSPWDAPVLFVKKKDGSMRLCIDYRELNKMTIKNQYPLP
PDVFP ELPGLPPP+E+DF I+LE GTAPISR PYRMAPAELKELKVQLQELLDKGFIRPSVSPW APVLFVKKKDGSMRLCIDYRELNK+T+KN+YPLP
Subjt: PDVFPGELPGLPPPKEIDFTIQLESGTAPISRVPYRMAPAELKELKVQLQELLDKGFIRPSVSPWDAPVLFVKKKDGSMRLCIDYRELNKMTIKNQYPLP
Query: KIDDLFDQLQGATVFSKIDL
+IDDLFDQLQGATVFSKIDL
Subjt: KIDDLFDQLQGATVFSKIDL
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P0CT34 Transposon Tf2-1 polyprotein | 3.1e-15 | 36.04 | Show/hide |
Query: LPPP-KEIDFTIQLESGTAPISRVPYRMAPAELKELKVQLQELLDKGFIRPSVSPWDAPVLFVKKKDGSMRLCIDYRELNKMTIKNQYPLPKIDDLFDQL
LP P K ++F ++L + Y + P +++ + ++ + L G IR S + PV+FV KK+G++R+ +DY+ LNK N YPLP I+ L ++
Subjt: LPPP-KEIDFTIQLESGTAPISRVPYRMAPAELKELKVQLQELLDKGFIRPSVSPWDAPVLFVKKKDGSMRLCIDYRELNKMTIKNQYPLPKIDDLFDQL
Query: QGATVFSKIDL
QG+T+F+K+DL
Subjt: QGATVFSKIDL
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| P0CT41 Transposon Tf2-12 polyprotein | 3.1e-15 | 36.04 | Show/hide |
Query: LPPP-KEIDFTIQLESGTAPISRVPYRMAPAELKELKVQLQELLDKGFIRPSVSPWDAPVLFVKKKDGSMRLCIDYRELNKMTIKNQYPLPKIDDLFDQL
LP P K ++F ++L + Y + P +++ + ++ + L G IR S + PV+FV KK+G++R+ +DY+ LNK N YPLP I+ L ++
Subjt: LPPP-KEIDFTIQLESGTAPISRVPYRMAPAELKELKVQLQELLDKGFIRPSVSPWDAPVLFVKKKDGSMRLCIDYRELNKMTIKNQYPLPKIDDLFDQL
Query: QGATVFSKIDL
QG+T+F+K+DL
Subjt: QGATVFSKIDL
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| Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein | 4.6e-19 | 38.64 | Show/hide |
Query: VW---EYPDVFPGELPGLPPPKEID-----FTIQLESGTAPISRVPYRMAPAELKELKVQLQELLDKGFIRPSVSPWDAPVLFVKKKDGSMRLCIDYREL
VW +Y ++ +LP P P +I+ I+++ G PY + +E+ +Q+LLD FI PS SP +PV+ V KKDG+ RLC+DYR L
Subjt: VW---EYPDVFPGELPGLPPPKEID-----FTIQLESGTAPISRVPYRMAPAELKELKVQLQELLDKGFIRPSVSPWDAPVLFVKKKDGSMRLCIDYREL
Query: NKMTIKNQYPLPKIDDLFDQLQGATVFSKIDL
NK TI + +PLP+ID+L ++ A +F+ +DL
Subjt: NKMTIKNQYPLPKIDDLFDQLQGATVFSKIDL
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| Q99315 Transposon Ty3-G Gag-Pol polyprotein | 4.6e-19 | 38.64 | Show/hide |
Query: VW---EYPDVFPGELPGLPPPKEID-----FTIQLESGTAPISRVPYRMAPAELKELKVQLQELLDKGFIRPSVSPWDAPVLFVKKKDGSMRLCIDYREL
VW +Y ++ +LP P P +I+ I+++ G PY + +E+ +Q+LLD FI PS SP +PV+ V KKDG+ RLC+DYR L
Subjt: VW---EYPDVFPGELPGLPPPKEID-----FTIQLESGTAPISRVPYRMAPAELKELKVQLQELLDKGFIRPSVSPWDAPVLFVKKKDGSMRLCIDYREL
Query: NKMTIKNQYPLPKIDDLFDQLQGATVFSKIDL
NK TI + +PLP+ID+L ++ A +F+ +DL
Subjt: NKMTIKNQYPLPKIDDLFDQLQGATVFSKIDL
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| Q9UR07 Transposon Tf2-11 polyprotein | 3.1e-15 | 36.04 | Show/hide |
Query: LPPP-KEIDFTIQLESGTAPISRVPYRMAPAELKELKVQLQELLDKGFIRPSVSPWDAPVLFVKKKDGSMRLCIDYRELNKMTIKNQYPLPKIDDLFDQL
LP P K ++F ++L + Y + P +++ + ++ + L G IR S + PV+FV KK+G++R+ +DY+ LNK N YPLP I+ L ++
Subjt: LPPP-KEIDFTIQLESGTAPISRVPYRMAPAELKELKVQLQELLDKGFIRPSVSPWDAPVLFVKKKDGSMRLCIDYRELNKMTIKNQYPLPKIDDLFDQL
Query: QGATVFSKIDL
QG+T+F+K+DL
Subjt: QGATVFSKIDL
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