CuGenDBv2

Gene ID	Cmc08g0226421
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Genome location	CMiso1.1chr08:18412934..18415451
RNA-Seq Expression	Cmc08g0226421
Synteny	Cmc08g0226421
Gene Ontology terms	GO:0006278 - RNA-dependent DNA biosynthetic process (biological process) GO:0006508 - proteolysis (biological process) GO:0015074 - DNA integration (biological process) GO:0003676 - nucleic acid binding (molecular function) GO:0003964 - RNA-directed DNA polymerase activity (molecular function) GO:0004190 - aspartic-type endopeptidase activity (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR000477 - Reverse transcriptase domain IPR001584 - Integrase, catalytic core IPR012337 - Ribonuclease H-like superfamily IPR036397 - Ribonuclease H superfamily IPR041373 - Reverse transcriptase, RNase H-like domain IPR041588 - Integrase zinc-binding domain IPR043128 - Reverse transcriptase/Diguanylate cyclase domain IPR043502 - DNA/RNA polymerase superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0026271.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

96.4

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Query:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNIVFREFLDTFV
        MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMN VFREFLDTFV
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNIVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKARVSVDPAKIEAVTGWTRPSTVSGVRSFLGLAGYYRRFVENFSR
        IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKA VSVDPAKIEAVTGWTRPSTVS VRSFLGLAGYYRRFVENFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKARVSVDPAKIEAVTGWTRPSTVSGVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVPTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
        IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPV TVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Subjt:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVPTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW

Query:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDPERAEIAVSVGAVTMQLAQLT
        RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRD ERAEIAVSVGAVTMQLAQLT
Subjt:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDPERAEIAVSVGAVTMQLAQLT

Query:  VQPTLRQRIIGAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFERRLCVPSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS
        VQPTLRQRII AQ NDPYLVEKR LAEAGQA  FS+SSDGGL+FER LCVPSDSA KTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS
Subjt:  VQPTLRQRIIGAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFERRLCVPSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS

Query:  RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR
        +CLVCQQVKAPRQKP GLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLH VPVSIVSD+DAR
Subjt:  RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR

Query:  FTSKFWKGLQTAMGTRLDFSTTFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLM
        FTSKFWKGLQTAMGTRLDFST FHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGM PFEALYGKCCRSPVCWGEVGEQ LM
Subjt:  FTSKFWKGLQTAMGTRLDFSTTFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLM

Query:  GPELVQSTNEAILKIRSRMHTAQSRQKSYEDVRRKDLGFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLLTVHDLFHV
        GPELVQSTNEAI KIRSRMHTAQSRQKSY DVRRKDL F +GDKVFLKVAPMRGVLRFERRGKLSPRFV PFEILERIGPVAYRLALPPSL TVHD+FHV
Subjt:  GPELVQSTNEAILKIRSRMHTAQSRQKSYEDVRRKDLGFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLLTVHDLFHV

Query:  SMLRK
        SMLRK
Subjt:  SMLRK

KAA0040188.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

96.89

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Query:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNIVFREFLDTFV
        MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMN VF+EFLDTFV
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNIVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKARVSVDPAKIEAVTGWTRPSTVSGVRSFLGLAGYYRRFVENFSR
        IVFIDDILIYSK EAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKA VSVDPAKIEAVTGWTRPSTVS VRSFLGLAGYYRRFVENFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKARVSVDPAKIEAVTGWTRPSTVSGVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVPTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
        IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPV TVPDGSGSFVIYSDASKKGLG VLMQQGKVVAYASRQLKSHEQNYPTHDLELAAV+FALKIW
Subjt:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVPTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW

Query:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDPERAEIAVSVGAVTMQLAQLT
        RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR APLHRD ERAEIAVSVGA+TMQLAQLT
Subjt:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDPERAEIAVSVGAVTMQLAQLT

Query:  VQPTLRQRIIGAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFERRLCVPSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS
        VQPTLRQRIIGAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFERRLCVPSDSAIK ELLSEAHSSPF MHPGSTKMYQDLKRVYWWRNMKREVAEFVS
Subjt:  VQPTLRQRIIGAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFERRLCVPSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS

Query:  RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR
        RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTY ASKWAQLYMSEIVRLHGVPVSIVSDRDAR
Subjt:  RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR

Query:  FTSKFWKGLQTAMGTRLDFSTTFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLM
        FTS+FWKGLQTAMGTRLDFST FHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALY KCCRS VCWGEVGEQRLM
Subjt:  FTSKFWKGLQTAMGTRLDFSTTFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLM

Query:  GPELVQSTNEAILKIRSRMHTAQSRQKSYEDVRRKDLGFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLLTVHDLFHV
        GPELVQSTNEAI KIRSRMHTAQSRQKSY DVRRKDL FEVGDKVFLKVAPMRGVLRFERRGKLSPRFVG FEILERIGPVAYR+ALPPSL TVHD+FHV
Subjt:  GPELVQSTNEAILKIRSRMHTAQSRQKSYEDVRRKDLGFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLLTVHDLFHV

Query:  SMLRK
        SMLRK
Subjt:  SMLRK

KAA0048687.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

96.77

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNIVFREFLDTFV
        MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMN VFREFLDTFV
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNIVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKARVSVDPAKIEAVTGWTRPSTVSGVRSFLGLAGYYRRFVENFSR
        IVFIDDILIYSKTEAEHEEHLR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKA VSVDPAKIEAVTGWTRPSTVS VRSFLGLAGYYRRFVENFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKARVSVDPAKIEAVTGWTRPSTVSGVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVPTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
        IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPV TVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Subjt:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVPTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW

Query:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDPERAEIAVSVGAVTMQLAQLT
        RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRD ERAEIAVSVGAVTMQLAQLT
Subjt:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDPERAEIAVSVGAVTMQLAQLT

Query:  VQPTLRQRIIGAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFERRLCVPSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS
        VQPTLRQRII AQSNDPYLVEKRGLAEAGQA  FS+SSDGGL+FERRLCVPSDS +KTELLSEAHSSPFSMHPGSTKMY+D+KRVYWWRNMKREVAEFVS
Subjt:  VQPTLRQRIIGAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFERRLCVPSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS

Query:  RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR
        RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR
Subjt:  RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR

Query:  FTSKFWKGLQTAMGTRLDFSTTFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLM
        FTSKFWK LQTAMGTRLDFST FHPQTDGQTERLNQVLE MLRACALEFPGSWDSHLHLMEF YNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLM
Subjt:  FTSKFWKGLQTAMGTRLDFSTTFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLM

Query:  GPELVQSTNEAILKIRSRMHTAQSRQKSYEDVRRKDLGFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLLTVHDLFHV
        GPELVQSTNEAI KIRSRMHTAQSRQKSY DVRRKDL FEVGDKVFLKVAPMRGVLRFERRGKLSPRF+GPFEILERIGPVAYRLALPPSL TVHD+FHV
Subjt:  GPELVQSTNEAILKIRSRMHTAQSRQKSYEDVRRKDLGFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLLTVHDLFHV

Query:  SMLRK
        SMLRK
Subjt:  SMLRK

KAA0051357.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

96.65

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNIVFREFLDTFV
        MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGY+QLRIKD DVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMN VFREFLDTFV
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNIVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKARVSVDPAKIEAVTGWTRPSTVSGVRSFLGLAGYYRRFVENFSR
        IVFIDDILIYSKTEAEHEEHLR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKARVSVDPAKIEAVTGWTRPSTVS VRSFLGLAGYYRRFVENFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKARVSVDPAKIEAVTGWTRPSTVSGVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVPTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
        IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPV TVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Subjt:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVPTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW

Query:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDPERAEIAVSVGAVTMQLAQLT
        RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRD ERAEIAVSVGAVTMQLAQLT
Subjt:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDPERAEIAVSVGAVTMQLAQLT

Query:  VQPTLRQRIIGAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFERRLCVPSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS
        VQPTLRQRII AQSNDPYLVEKRGLAEAGQA  FS+SSDGGL FE RLCVPSDSA+KTELL EAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS
Subjt:  VQPTLRQRIIGAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFERRLCVPSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS

Query:  RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR
        +CLVCQQVK PRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR
Subjt:  RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR

Query:  FTSKFWKGLQTAMGTRLDFSTTFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLM
        FTSKFWKGLQTAMGTRLDFST FHPQ DGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLM
Subjt:  FTSKFWKGLQTAMGTRLDFSTTFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLM

Query:  GPELVQSTNEAILKIRSRMHTAQSRQKSYEDVRRKDLGFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLLTVHDLFHV
        GPELVQSTNEAI KIRSRMHTAQSRQKSY DVRRKDL FE+ DKVFLKVAPM+GVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSL TVHD+FHV
Subjt:  GPELVQSTNEAILKIRSRMHTAQSRQKSYEDVRRKDLGFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLLTVHDLFHV

Query:  SMLRK
        SMLRK
Subjt:  SMLRK

KAA0057672.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

96.27

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNIVFREFLDTFV
        MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG HQLRIKD DVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMN VFREFLDTFV
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNIVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKARVSVDPAKIEAVTGWTRPSTVSGVRSFLGLAGYYRRFVENFSR
        IVFIDDILIYSKTEAEHEEHLR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKA VSVDPAKIEAVTGWTRPSTVS VRSFLGLAGYYRRFVENFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKARVSVDPAKIEAVTGWTRPSTVSGVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVPTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
         ATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPV TVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Subjt:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVPTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW

Query:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDPERAEIAVSVGAVTMQLAQLT
        RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRD ERAEIAVSVGAVTMQLAQLT
Subjt:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDPERAEIAVSVGAVTMQLAQLT

Query:  VQPTLRQRIIGAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFERRLCVPSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS
        VQPTLRQRII AQSNDPYLVEKRGLAEAGQA  FS+SSDGGL+FERRLCVPSDSA+KTELL+EAHSSPFSMHPGSTKMYQDLKR+YWWRNMKREVAEFVS
Subjt:  VQPTLRQRIIGAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFERRLCVPSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS

Query:  RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR
        +CLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFI GLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYT SKWAQLYMSEIVRLHGVPVSIVSDRDAR
Subjt:  RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR

Query:  FTSKFWKGLQTAMGTRLDFSTTFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLM
        FTSKFWKGLQTAMGTRLDFST FHPQTDGQTERLN+VLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALY KCCRSP+CWGEVGEQRLM
Subjt:  FTSKFWKGLQTAMGTRLDFSTTFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLM

Query:  GPELVQSTNEAILKIRSRMHTAQSRQKSYEDVRRKDLGFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLLTVHDLFHV
        GPELVQSTNEAI KIRSRMHTAQSRQKSY DVRRKDL FEVGDKVFLKVAPMRGV+RFERRGKLSPRFVGPFEILERIGPVAYRLALPPSL TVHD+FHV
Subjt:  GPELVQSTNEAILKIRSRMHTAQSRQKSYEDVRRKDLGFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLLTVHDLFHV

Query:  SMLRK
        SMLRK
Subjt:  SMLRK

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SPZ2 Pol protein

0.0e+00

96.4

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Query:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNIVFREFLDTFV
        MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMN VFREFLDTFV
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNIVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKARVSVDPAKIEAVTGWTRPSTVSGVRSFLGLAGYYRRFVENFSR
        IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKA VSVDPAKIEAVTGWTRPSTVS VRSFLGLAGYYRRFVENFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKARVSVDPAKIEAVTGWTRPSTVSGVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVPTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
        IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPV TVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Subjt:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVPTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW

Query:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDPERAEIAVSVGAVTMQLAQLT
        RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRD ERAEIAVSVGAVTMQLAQLT
Subjt:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDPERAEIAVSVGAVTMQLAQLT

Query:  VQPTLRQRIIGAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFERRLCVPSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS
        VQPTLRQRII AQ NDPYLVEKR LAEAGQA  FS+SSDGGL+FER LCVPSDSA KTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS
Subjt:  VQPTLRQRIIGAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFERRLCVPSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS

Query:  RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR
        +CLVCQQVKAPRQKP GLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLH VPVSIVSD+DAR
Subjt:  RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR

Query:  FTSKFWKGLQTAMGTRLDFSTTFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLM
        FTSKFWKGLQTAMGTRLDFST FHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGM PFEALYGKCCRSPVCWGEVGEQ LM
Subjt:  FTSKFWKGLQTAMGTRLDFSTTFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLM

Query:  GPELVQSTNEAILKIRSRMHTAQSRQKSYEDVRRKDLGFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLLTVHDLFHV
        GPELVQSTNEAI KIRSRMHTAQSRQKSY DVRRKDL F +GDKVFLKVAPMRGVLRFERRGKLSPRFV PFEILERIGPVAYRLALPPSL TVHD+FHV
Subjt:  GPELVQSTNEAILKIRSRMHTAQSRQKSYEDVRRKDLGFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLLTVHDLFHV

Query:  SMLRK
        SMLRK
Subjt:  SMLRK

A0A5A7TB42 Reverse transcriptase

0.0e+00

96.89

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Query:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNIVFREFLDTFV
        MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMN VF+EFLDTFV
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNIVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKARVSVDPAKIEAVTGWTRPSTVSGVRSFLGLAGYYRRFVENFSR
        IVFIDDILIYSK EAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKA VSVDPAKIEAVTGWTRPSTVS VRSFLGLAGYYRRFVENFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKARVSVDPAKIEAVTGWTRPSTVSGVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVPTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
        IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPV TVPDGSGSFVIYSDASKKGLG VLMQQGKVVAYASRQLKSHEQNYPTHDLELAAV+FALKIW
Subjt:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVPTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW

Query:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDPERAEIAVSVGAVTMQLAQLT
        RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR APLHRD ERAEIAVSVGA+TMQLAQLT
Subjt:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDPERAEIAVSVGAVTMQLAQLT

Query:  VQPTLRQRIIGAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFERRLCVPSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS
        VQPTLRQRIIGAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFERRLCVPSDSAIK ELLSEAHSSPF MHPGSTKMYQDLKRVYWWRNMKREVAEFVS
Subjt:  VQPTLRQRIIGAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFERRLCVPSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS

Query:  RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR
        RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTY ASKWAQLYMSEIVRLHGVPVSIVSDRDAR
Subjt:  RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR

Query:  FTSKFWKGLQTAMGTRLDFSTTFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLM
        FTS+FWKGLQTAMGTRLDFST FHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALY KCCRS VCWGEVGEQRLM
Subjt:  FTSKFWKGLQTAMGTRLDFSTTFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLM

Query:  GPELVQSTNEAILKIRSRMHTAQSRQKSYEDVRRKDLGFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLLTVHDLFHV
        GPELVQSTNEAI KIRSRMHTAQSRQKSY DVRRKDL FEVGDKVFLKVAPMRGVLRFERRGKLSPRFVG FEILERIGPVAYR+ALPPSL TVHD+FHV
Subjt:  GPELVQSTNEAILKIRSRMHTAQSRQKSYEDVRRKDLGFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLLTVHDLFHV

Query:  SMLRK
        SMLRK
Subjt:  SMLRK

A0A5A7U330 Reverse transcriptase

0.0e+00

96.77

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Query:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNIVFREFLDTFV
        MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMN VFREFLDTFV
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNIVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKARVSVDPAKIEAVTGWTRPSTVSGVRSFLGLAGYYRRFVENFSR
        IVFIDDILIYSKTEAEHEEHLR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKA VSVDPAKIEAVTGWTRPSTVS VRSFLGLAGYYRRFVENFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKARVSVDPAKIEAVTGWTRPSTVSGVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVPTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
        IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPV TVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Subjt:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVPTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW

Query:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDPERAEIAVSVGAVTMQLAQLT
        RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRD ERAEIAVSVGAVTMQLAQLT
Subjt:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDPERAEIAVSVGAVTMQLAQLT

Query:  VQPTLRQRIIGAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFERRLCVPSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS
        VQPTLRQRII AQSNDPYLVEKRGLAEAGQA  FS+SSDGGL+FERRLCVPSDS +KTELLSEAHSSPFSMHPGSTKMY+D+KRVYWWRNMKREVAEFVS
Subjt:  VQPTLRQRIIGAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFERRLCVPSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS

Query:  RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR
        RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR
Subjt:  RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR

Query:  FTSKFWKGLQTAMGTRLDFSTTFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLM
        FTSKFWK LQTAMGTRLDFST FHPQTDGQTERLNQVLE MLRACALEFPGSWDSHLHLMEF YNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLM
Subjt:  FTSKFWKGLQTAMGTRLDFSTTFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLM

Query:  GPELVQSTNEAILKIRSRMHTAQSRQKSYEDVRRKDLGFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLLTVHDLFHV
        GPELVQSTNEAI KIRSRMHTAQSRQKSY DVRRKDL FEVGDKVFLKVAPMRGVLRFERRGKLSPRF+GPFEILERIGPVAYRLALPPSL TVHD+FHV
Subjt:  GPELVQSTNEAILKIRSRMHTAQSRQKSYEDVRRKDLGFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLLTVHDLFHV

Query:  SMLRK
        SMLRK
Subjt:  SMLRK

A0A5A7UAA8 Reverse transcriptase

0.0e+00

96.65

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Query:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNIVFREFLDTFV
        MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGY+QLRIKD DVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMN VFREFLDTFV
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNIVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKARVSVDPAKIEAVTGWTRPSTVSGVRSFLGLAGYYRRFVENFSR
        IVFIDDILIYSKTEAEHEEHLR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKARVSVDPAKIEAVTGWTRPSTVS VRSFLGLAGYYRRFVENFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKARVSVDPAKIEAVTGWTRPSTVSGVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVPTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
        IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPV TVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Subjt:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVPTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW

Query:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDPERAEIAVSVGAVTMQLAQLT
        RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRD ERAEIAVSVGAVTMQLAQLT
Subjt:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDPERAEIAVSVGAVTMQLAQLT

Query:  VQPTLRQRIIGAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFERRLCVPSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS
        VQPTLRQRII AQSNDPYLVEKRGLAEAGQA  FS+SSDGGL FE RLCVPSDSA+KTELL EAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS
Subjt:  VQPTLRQRIIGAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFERRLCVPSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS

Query:  RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR
        +CLVCQQVK PRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR
Subjt:  RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR

Query:  FTSKFWKGLQTAMGTRLDFSTTFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLM
        FTSKFWKGLQTAMGTRLDFST FHPQ DGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLM
Subjt:  FTSKFWKGLQTAMGTRLDFSTTFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLM

Query:  GPELVQSTNEAILKIRSRMHTAQSRQKSYEDVRRKDLGFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLLTVHDLFHV
        GPELVQSTNEAI KIRSRMHTAQSRQKSY DVRRKDL FE+ DKVFLKVAPM+GVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSL TVHD+FHV
Subjt:  GPELVQSTNEAILKIRSRMHTAQSRQKSYEDVRRKDLGFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLLTVHDLFHV

Query:  SMLRK
        SMLRK
Subjt:  SMLRK

A0A5A7UP94 Pol protein

0.0e+00

96.27

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Query:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNIVFREFLDTFV
        MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG HQLRIKD DVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMN VFREFLDTFV
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNIVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKARVSVDPAKIEAVTGWTRPSTVSGVRSFLGLAGYYRRFVENFSR
        IVFIDDILIYSKTEAEHEEHLR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKA VSVDPAKIEAVTGWTRPSTVS VRSFLGLAGYYRRFVENFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKARVSVDPAKIEAVTGWTRPSTVSGVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVPTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
         ATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPV TVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Subjt:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVPTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW

Query:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDPERAEIAVSVGAVTMQLAQLT
        RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRD ERAEIAVSVGAVTMQLAQLT
Subjt:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDPERAEIAVSVGAVTMQLAQLT

Query:  VQPTLRQRIIGAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFERRLCVPSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS
        VQPTLRQRII AQSNDPYLVEKRGLAEAGQA  FS+SSDGGL+FERRLCVPSDSA+KTELL+EAHSSPFSMHPGSTKMYQDLKR+YWWRNMKREVAEFVS
Subjt:  VQPTLRQRIIGAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFERRLCVPSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS

Query:  RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR
        +CLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFI GLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYT SKWAQLYMSEIVRLHGVPVSIVSDRDAR
Subjt:  RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR

Query:  FTSKFWKGLQTAMGTRLDFSTTFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLM
        FTSKFWKGLQTAMGTRLDFST FHPQTDGQTERLN+VLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALY KCCRSP+CWGEVGEQRLM
Subjt:  FTSKFWKGLQTAMGTRLDFSTTFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLM

Query:  GPELVQSTNEAILKIRSRMHTAQSRQKSYEDVRRKDLGFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLLTVHDLFHV
        GPELVQSTNEAI KIRSRMHTAQSRQKSY DVRRKDL FEVGDKVFLKVAPMRGV+RFERRGKLSPRFVGPFEILERIGPVAYRLALPPSL TVHD+FHV
Subjt:  GPELVQSTNEAILKIRSRMHTAQSRQKSYEDVRRKDLGFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLLTVHDLFHV

Query:  SMLRK
        SMLRK
Subjt:  SMLRK

SwissProt top hits

e value

%identity

Alignment

P0CT34 Transposon Tf2-1 polyprotein

1.8e-129

33.13

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNIVFREFLDTFV
        +R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++ GD  K AFR   G +E++VM +G++ APA F   +N +  E  ++ V
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNIVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKARVSVDPAKIEAVTGWTRPSTVSGVRSFLGLAGYYRRFVENFSR
        + ++DDILI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV F+G+ +S+   +     I+ V  W +P     +R FLG   Y R+F+   S+
Subjt:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKARVSVDPAKIEAVTGWTRPSTVSGVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVPTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVF
        +  PL  L +K   + W+     + +N+KQ LV+ PV    D S   ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ 
Subjt:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVPTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVF

Query:  ALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDPERAEIAVSVGA
        +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++    P+ +D E   I      
Subjt:  ALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDPERAEIAVSVGA

Query:  VTMQLAQLTVQPTLRQRIIGAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFER-RLCVPSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRN
            + Q+++    + +++   +ND  L+      +    E   +  DG L+  + ++ +P+D+ +   ++ + H     +HPG   +   + R + W+ 
Subjt:  VTMQLAQLTVQPTLRQRIIGAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFER-RLCVPSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRN

Query:  MKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVP
        +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A  VP   + TA + A+++   ++   G P
Subjt:  MKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVP

Query:  VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTTFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPV
          I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++      SP+
Subjt:  VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTTFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPV

Query:  CWGEVGEQRLMGPELVQSTNEAILKIRSRMHTAQSRQKSYEDVRRKDL-GFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALP
           E+        E  Q T +    ++  ++T   + K Y D++ +++  F+ GD V +K     G L   +  KL+P F GPF +L++ GP  Y L LP
Subjt:  CWGEVGEQRLMGPELVQSTNEAILKIRSRMHTAQSRQKSYEDVRRKDL-GFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALP

Query:  PSLLTV-HDLFHVSMLRK
         S+  +    FHVS L K
Subjt:  PSLLTV-HDLFHVSMLRK

P0CT35 Transposon Tf2-2 polyprotein

1.8e-129

33.13

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNIVFREFLDTFV
        +R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++ GD  K AFR   G +E++VM +G++ APA F   +N +  E  ++ V
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNIVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKARVSVDPAKIEAVTGWTRPSTVSGVRSFLGLAGYYRRFVENFSR
        + ++DDILI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV F+G+ +S+   +     I+ V  W +P     +R FLG   Y R+F+   S+
Subjt:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKARVSVDPAKIEAVTGWTRPSTVSGVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVPTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVF
        +  PL  L +K   + W+     + +N+KQ LV+ PV    D S   ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ 
Subjt:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVPTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVF

Query:  ALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDPERAEIAVSVGA
        +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++    P+ +D E   I      
Subjt:  ALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDPERAEIAVSVGA

Query:  VTMQLAQLTVQPTLRQRIIGAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFER-RLCVPSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRN
            + Q+++    + +++   +ND  L+      +    E   +  DG L+  + ++ +P+D+ +   ++ + H     +HPG   +   + R + W+ 
Subjt:  VTMQLAQLTVQPTLRQRIIGAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFER-RLCVPSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRN

Query:  MKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVP
        +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A  VP   + TA + A+++   ++   G P
Subjt:  MKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVP

Query:  VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTTFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPV
          I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++      SP+
Subjt:  VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTTFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPV

Query:  CWGEVGEQRLMGPELVQSTNEAILKIRSRMHTAQSRQKSYEDVRRKDL-GFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALP
           E+        E  Q T +    ++  ++T   + K Y D++ +++  F+ GD V +K     G L   +  KL+P F GPF +L++ GP  Y L LP
Subjt:  CWGEVGEQRLMGPELVQSTNEAILKIRSRMHTAQSRQKSYEDVRRKDL-GFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALP

Query:  PSLLTV-HDLFHVSMLRK
         S+  +    FHVS L K
Subjt:  PSLLTV-HDLFHVSMLRK

P0CT36 Transposon Tf2-3 polyprotein

1.8e-129

33.13

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNIVFREFLDTFV
        +R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++ GD  K AFR   G +E++VM +G++ APA F   +N +  E  ++ V
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNIVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKARVSVDPAKIEAVTGWTRPSTVSGVRSFLGLAGYYRRFVENFSR
        + ++DDILI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV F+G+ +S+   +     I+ V  W +P     +R FLG   Y R+F+   S+
Subjt:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKARVSVDPAKIEAVTGWTRPSTVSGVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVPTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVF
        +  PL  L +K   + W+     + +N+KQ LV+ PV    D S   ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ 
Subjt:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVPTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVF

Query:  ALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDPERAEIAVSVGA
        +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++    P+ +D E   I      
Subjt:  ALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDPERAEIAVSVGA

Query:  VTMQLAQLTVQPTLRQRIIGAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFER-RLCVPSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRN
            + Q+++    + +++   +ND  L+      +    E   +  DG L+  + ++ +P+D+ +   ++ + H     +HPG   +   + R + W+ 
Subjt:  VTMQLAQLTVQPTLRQRIIGAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFER-RLCVPSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRN

Query:  MKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVP
        +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A  VP   + TA + A+++   ++   G P
Subjt:  MKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVP

Query:  VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTTFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPV
          I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++      SP+
Subjt:  VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTTFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPV

Query:  CWGEVGEQRLMGPELVQSTNEAILKIRSRMHTAQSRQKSYEDVRRKDL-GFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALP
           E+        E  Q T +    ++  ++T   + K Y D++ +++  F+ GD V +K     G L   +  KL+P F GPF +L++ GP  Y L LP
Subjt:  CWGEVGEQRLMGPELVQSTNEAILKIRSRMHTAQSRQKSYEDVRRKDL-GFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALP

Query:  PSLLTV-HDLFHVSMLRK
         S+  +    FHVS L K
Subjt:  PSLLTV-HDLFHVSMLRK

P0CT37 Transposon Tf2-4 polyprotein

1.8e-129

33.13

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNIVFREFLDTFV
        +R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++ GD  K AFR   G +E++VM +G++ APA F   +N +  E  ++ V
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNIVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKARVSVDPAKIEAVTGWTRPSTVSGVRSFLGLAGYYRRFVENFSR
        + ++DDILI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV F+G+ +S+   +     I+ V  W +P     +R FLG   Y R+F+   S+
Subjt:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKARVSVDPAKIEAVTGWTRPSTVSGVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVPTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVF
        +  PL  L +K   + W+     + +N+KQ LV+ PV    D S   ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ 
Subjt:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVPTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVF

Query:  ALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDPERAEIAVSVGA
        +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++    P+ +D E   I      
Subjt:  ALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDPERAEIAVSVGA

Query:  VTMQLAQLTVQPTLRQRIIGAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFER-RLCVPSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRN
            + Q+++    + +++   +ND  L+      +    E   +  DG L+  + ++ +P+D+ +   ++ + H     +HPG   +   + R + W+ 
Subjt:  VTMQLAQLTVQPTLRQRIIGAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFER-RLCVPSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRN

Query:  MKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVP
        +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A  VP   + TA + A+++   ++   G P
Subjt:  MKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVP

Query:  VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTTFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPV
          I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++      SP+
Subjt:  VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTTFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPV

Query:  CWGEVGEQRLMGPELVQSTNEAILKIRSRMHTAQSRQKSYEDVRRKDL-GFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALP
           E+        E  Q T +    ++  ++T   + K Y D++ +++  F+ GD V +K     G L   +  KL+P F GPF +L++ GP  Y L LP
Subjt:  CWGEVGEQRLMGPELVQSTNEAILKIRSRMHTAQSRQKSYEDVRRKDL-GFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALP

Query:  PSLLTV-HDLFHVSMLRK
         S+  +    FHVS L K
Subjt:  PSLLTV-HDLFHVSMLRK

P0CT41 Transposon Tf2-12 polyprotein

1.8e-129

33.13

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNIVFREFLDTFV
        +R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++ GD  K AFR   G +E++VM +G++ APA F   +N +  E  ++ V
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNIVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKARVSVDPAKIEAVTGWTRPSTVSGVRSFLGLAGYYRRFVENFSR
        + ++DDILI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV F+G+ +S+   +     I+ V  W +P     +R FLG   Y R+F+   S+
Subjt:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKARVSVDPAKIEAVTGWTRPSTVSGVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVPTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVF
        +  PL  L +K   + W+     + +N+KQ LV+ PV    D S   ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ 
Subjt:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVPTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVF

Query:  ALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDPERAEIAVSVGA
        +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++    P+ +D E   I      
Subjt:  ALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDPERAEIAVSVGA

Query:  VTMQLAQLTVQPTLRQRIIGAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFER-RLCVPSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRN
            + Q+++    + +++   +ND  L+      +    E   +  DG L+  + ++ +P+D+ +   ++ + H     +HPG   +   + R + W+ 
Subjt:  VTMQLAQLTVQPTLRQRIIGAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFER-RLCVPSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRN

Query:  MKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVP
        +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A  VP   + TA + A+++   ++   G P
Subjt:  MKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVP

Query:  VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTTFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPV
          I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++      SP+
Subjt:  VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTTFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPV

Query:  CWGEVGEQRLMGPELVQSTNEAILKIRSRMHTAQSRQKSYEDVRRKDL-GFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALP
           E+        E  Q T +    ++  ++T   + K Y D++ +++  F+ GD V +K     G L   +  KL+P F GPF +L++ GP  Y L LP
Subjt:  CWGEVGEQRLMGPELVQSTNEAILKIRSRMHTAQSRQKSYEDVRRKDL-GFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALP

Query:  PSLLTV-HDLFHVSMLRK
         S+  +    FHVS L K
Subjt:  PSLLTV-HDLFHVSMLRK

Arabidopsis top hits

e value

%identity

Alignment

ATMG00860.1 DNA/RNA polymerases superfamily protein

2.1e-24

42.75

Show/hide

Query:  HLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLG--HVVSKARVSVDPAKIEAVTGWTRPSTVSGVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVW
        HL +VLQ    ++ YA   KC F   Q+++LG  H++S   VS DPAK+EA+ GW  P   + +R FLGL GYYRRFV+N+ +I  PLT+L +K +   W
Subjt:  HLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLG--HVVSKARVSVDPAKIEAVTGWTRPSTVSGVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVW

Query:  SKACEDSFQNLKQKLVTAPVPTVPDGSGSFV
        ++    +F+ LK  + T PV  +PD    FV
Subjt:  SKACEDSFQNLKQKLVTAPVPTVPDGSGSFV

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCGTCTATGCATTGACTATAGGGAGTTGAACAAGGTAACCGTAAAGAACAGATATCCCTTGCCCAGGATCGACGATCTATTTGACCAGTTACAGGGAGCCACAGTGTT
CTCTAAGATTGATCTTCGGTCGGGATACCATCAGTTGAGGATTAAGGATGGGGATGTACCGAAGACAGCATTTCGTTCCAGATATGGACACTACGAGTTTATTGTGATGT
CTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACATAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATCGTGTTTATCGACGATATCTTGATATAC
TCCAAGACGGAGGCCGAACATGAGGAGCATTTACGTATAGTTCTGCAAACACTTCGGGATAATAAGTTGTATGCAAAGTTCTCAAAATGCGAGTTTTGGCTGAAGCAGGT
GTCGTTTCTGGGCCACGTGGTTTCTAAGGCTAGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGACCTTCCACAGTCAGTGGGGTTCGTAGCT
TTCTGGGTTTAGCAGGTTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTCACTCAGTTGACCAGGAAGGGAGCTCCTTTTGTTTGGAGCAAGGCG
TGTGAGGATAGTTTCCAGAACCTTAAACAGAAGCTAGTTACCGCACCGGTTCCTACTGTACCTGATGGTTCTGGCAGTTTCGTGATTTATAGTGATGCTTCCAAGAAGGG
TTTGGGTTGTGTTTTGATGCAACAGGGTAAGGTGGTCGCTTATGCGTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATTTAGAGTTGGCAGCGGTGG
TTTTTGCTTTAAAAATATGGAGGCATTATTTATATGGTGAAAAGATACAGATATTCACGGATCATAAGAGCTTGAAATACTTCTTTACCCAGAAAGAATTGAATATGAGA
CAGCGAAGGTGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATTCAGC
AGCACTTATTACCCGACAGGCCCCATTGCATCGGGATCCCGAGCGGGCCGAGATTGCAGTGTCAGTGGGGGCAGTCACTATGCAGTTAGCCCAGTTGACGGTACAGCCGA
CTTTGAGGCAAAGGATCATTGGTGCTCAGAGTAACGATCCTTATTTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGCAAGCAGAGGGGTTCTCCATATCCTCTGATGGT
GGACTTGTGTTTGAGAGACGCCTCTGTGTGCCGTCAGATAGTGCGATTAAGACAGAATTATTATCTGAGGCTCACAGTTCCCCATTTTCCATGCACCCGGGTAGTACGAA
GATGTATCAAGACCTGAAGCGGGTTTATTGGTGGCGTAACATGAAGAGGGAGGTAGCAGAATTTGTTAGTAGATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGA
AACCAGCGGGTTTATTACAACCCTTGAGCATACCGGAATGGAAGTGGGAAAACGTATCCATGGATTTCATTACAGGACTGCCGAGAACTCTGAGGGGTTTTACAGTGATT
TGGGTTGTGGTGGACAGGCTTACCAAATCAGCGCACTTCGTTCCGGGTAAATCCACCTATACTGCTAGTAAGTGGGCACAACTGTACATGTCGGAGATAGTGAGATTACA
TGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACCTCCAAATTCTGGAAGGGTTTGCAGACGGCTATGGGAACGAGGTTAGACTTTAGTACAACTTTCC
ATCCACAGACTGACGGTCAGACTGAGCGTCTGAACCAAGTTTTAGAGGATATGTTGCGGGCGTGTGCATTGGAATTTCCAGGTAGCTGGGACTCCCATTTGCATTTGATG
GAATTTGCTTATAATAACAGTTATCAGGCTACTATTGGCATGGCACCATTTGAGGCCTTGTACGGCAAATGTTGTAGATCCCCGGTTTGCTGGGGTGAGGTGGGTGAGCA
GAGATTGATGGGTCCTGAGTTAGTTCAGTCTACTAACGAAGCGATATTGAAGATTAGATCACGCATGCATACCGCTCAGAGTAGGCAGAAGAGTTATGAAGATGTGAGGC
GGAAGGACCTTGGGTTTGAGGTAGGGGACAAGGTGTTCTTAAAGGTAGCACCTATGAGAGGTGTCTTGCGATTCGAAAGGAGGGGAAAGCTGAGTCCCCGTTTTGTTGGG
CCGTTTGAGATTCTGGAGCGGATTGGCCCTGTGGCTTATCGCTTGGCGTTGCCACCATCACTCTTGACAGTTCACGATCTGTTTCATGTCTCTATGTTGAGGAAGTGA

mRNA sequence

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Protein sequence

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MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNIVFREFLDTFVIVFIDDILIY
SKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKARVSVDPAKIEAVTGWTRPSTVSGVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKA
CEDSFQNLKQKLVTAPVPTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMR
QRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDPERAEIAVSVGAVTMQLAQLTVQPTLRQRIIGAQSNDPYLVEKRGLAEAGQAEGFSISSDG
GLVFERRLCVPSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVI
WVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTTFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLM
EFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAILKIRSRMHTAQSRQKSYEDVRRKDLGFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVG
PFEILERIGPVAYRLALPPSLLTVHDLFHVSMLRK

Cmc08g0226421 (gene) of Melon (Charmono) v1.1 genome