; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc08g0226441 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc08g0226441
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase
Genome locationCMiso1.1chr08:18434370..18435573
RNA-Seq ExpressionCmc08g0226441
SyntenyCmc08g0226441
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0008194 - UDP-glycosyltransferase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001584 - Integrase, catalytic core
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR041588 - Integrase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032541.1 pol protein [Cucumis melo var. makuwa]2.7e-20593.1Show/hide
Query:  MVETGQGEDFSISSDDGLMFEGRLCVPKDIAVRTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQVKAPRQCPAGLLQPLSV
        MVETGQGEDFSIS+DDGLMFEGRLCVP+D AV+TELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQVK+PRQ PAGL+Q LSV
Subjt:  MVETGQGEDFSISSDDGLMFEGRLCVPKDIAVRTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQVKAPRQCPAGLLQPLSV

Query:  PGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGKLYMTEIVRVHGVPISIISDRDARFTSKFWKGLQLALGTRLDFNTAFH
        PGWKWESVSMDFIT LPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWG+LYMTEIVR+HGVP+SIISDRDARFTSKFWKGLQLALGTRLDF+TAFH
Subjt:  PGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGKLYMTEIVRVHGVPISIISDRDARFTSKFWKGLQLALGTRLDFNTAFH

Query:  PQTDGQTERLNQILEDMLRVCVLEFSGSWDSHLHLMEFAYNNRYQATIGMASFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS
        PQTDGQTERLNQILEDMLR CVLEFSGSWDSHLHLMEFAYNN YQATIGMA FEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS
Subjt:  PQTDGQTERLNQILEDMLRVCVLEFSGSWDSHLHLMEFAYNNRYQATIGMASFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS

Query:  RQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFVKKGKLSPCFVGPFEILERISPVAYRLALPPSFAATQHMWWTS
        RQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF KKGKLSP FVGPFEILERI PVAYRLALPPSFAA   ++  S
Subjt:  RQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFVKKGKLSPCFVGPFEILERISPVAYRLALPPSFAATQHMWWTS

KAA0040547.1 pol protein [Cucumis melo var. makuwa]3.6e-20593.37Show/hide
Query:  MVETGQGEDFSISSDDGLMFEGRLCVPKDIAVRTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQVKAPRQCPAGLLQPLSV
        MVETGQGEDFSISSDDGLMFEGRLCVP+D AVRTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQVKAPRQCP GLLQPLSV
Subjt:  MVETGQGEDFSISSDDGLMFEGRLCVPKDIAVRTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQVKAPRQCPAGLLQPLSV

Query:  PGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGKLYMTEIVRVHGVPISIISDRDARFTSKFWKGLQLALGTRLDFNTAFH
         GWKWESVSMDFIT LPKTLKGYTVIWVVVDRLTKSAHFVP KSTYTA+KWG+LYMTEIVR+HGVP+SIISDRDARFTSKFWKGLQLALGTRLDF+TAFH
Subjt:  PGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGKLYMTEIVRVHGVPISIISDRDARFTSKFWKGLQLALGTRLDFNTAFH

Query:  PQTDGQTERLNQILEDMLRVCVLEFSGSWDSHLHLMEFAYNNRYQATIGMASFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS
        PQTDGQTERLNQILEDMLR CVLEFSGSWDSHLHLMEFAYNN YQATIGMA FEALYGKCCRS VCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS
Subjt:  PQTDGQTERLNQILEDMLRVCVLEFSGSWDSHLHLMEFAYNNRYQATIGMASFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS

Query:  RQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFVKKGKLSPCFVGPFEILERISPVAYRLALPPSFAATQHMWWTS
        RQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFVKKGK SP FVGPFEILERI PVAYRLALPPSFAA   ++  S
Subjt:  RQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFVKKGKLSPCFVGPFEILERISPVAYRLALPPSFAATQHMWWTS

KAA0040942.1 pol protein [Cucumis melo var. makuwa]2.7e-20593.37Show/hide
Query:  MVETGQGEDFSISSDDGLMFEGRLCVPKDIAVRTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQVKAPRQCPAGLLQPLSV
        MVETGQGEDFSISSDDGLMFEGRLCVP+D AV+TELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQVKAPRQ PAGLLQPLSV
Subjt:  MVETGQGEDFSISSDDGLMFEGRLCVPKDIAVRTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQVKAPRQCPAGLLQPLSV

Query:  PGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGKLYMTEIVRVHGVPISIISDRDARFTSKFWKGLQLALGTRLDFNTAFH
        PGWKWESVSMDFIT LPKTLKG+TVIWVVVDRLTKSAHFVPGKSTYTASKWG+LYMTEIVR+HGVP+SIISDRDARFTSKFWKGLQLALGTRLDF+TAFH
Subjt:  PGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGKLYMTEIVRVHGVPISIISDRDARFTSKFWKGLQLALGTRLDFNTAFH

Query:  PQTDGQTERLNQILEDMLRVCVLEFSGSWDSHLHLMEFAYNNRYQATIGMASFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS
        PQTDGQTERLNQILEDMLR CVLEFSGSWDSHLHLMEFAYNN YQATIGMA FEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS
Subjt:  PQTDGQTERLNQILEDMLRVCVLEFSGSWDSHLHLMEFAYNNRYQATIGMASFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS

Query:  RQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFVKKGKLSPCFVGPFEILERISPVAYRLALPPSFAATQHMWWTS
        RQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF KKGKLSP FVG FEILERI PVAYRLALPPSFA    ++  S
Subjt:  RQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFVKKGKLSPCFVGPFEILERISPVAYRLALPPSFAATQHMWWTS

KAA0045309.1 pol protein [Cucumis melo var. makuwa]3.6e-20593.37Show/hide
Query:  MVETGQGEDFSISSDDGLMFEGRLCVPKDIAVRTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQVKAPRQCPAGLLQPLSV
        MVETGQGEDFSISSDDGLMFEGRLCVP+D AV+TELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQVKAPRQ PAGLLQPLSV
Subjt:  MVETGQGEDFSISSDDGLMFEGRLCVPKDIAVRTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQVKAPRQCPAGLLQPLSV

Query:  PGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGKLYMTEIVRVHGVPISIISDRDARFTSKFWKGLQLALGTRLDFNTAFH
        PGWKWESVSMDFIT LPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWG+LY+TEIVR+HGVP+SIISDRDARFTSKFWKGLQLAL TRLDF+TAFH
Subjt:  PGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGKLYMTEIVRVHGVPISIISDRDARFTSKFWKGLQLALGTRLDFNTAFH

Query:  PQTDGQTERLNQILEDMLRVCVLEFSGSWDSHLHLMEFAYNNRYQATIGMASFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS
        PQTDGQTERLNQILEDMLR CVLEFSGSWDSHLHLMEFAYNN YQATIGMA FEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS
Subjt:  PQTDGQTERLNQILEDMLRVCVLEFSGSWDSHLHLMEFAYNNRYQATIGMASFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS

Query:  RQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFVKKGKLSPCFVGPFEILERISPVAYRLALPPSFAATQHMWWTS
        RQKSYADVRRKDLEFEVGDMVFLKV PMKGVLRF KKGKLSP FVGPFEILERI PVAYRLALPPSFAA   ++  S
Subjt:  RQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFVKKGKLSPCFVGPFEILERISPVAYRLALPPSFAATQHMWWTS

KAA0056636.1 pol protein [Cucumis melo var. makuwa]3.6e-20593.1Show/hide
Query:  MVETGQGEDFSISSDDGLMFEGRLCVPKDIAVRTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQVKAPRQCPAGLLQPLSV
        MVETGQGEDFSISSDDGLMFEGRLCVP+D AV+TELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQVKAPRQCP GLLQPLSV
Subjt:  MVETGQGEDFSISSDDGLMFEGRLCVPKDIAVRTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQVKAPRQCPAGLLQPLSV

Query:  PGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGKLYMTEIVRVHGVPISIISDRDARFTSKFWKGLQLALGTRLDFNTAFH
        PGWKWESVSMDFIT LPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWG+LYMTEIVR+HGVP+SI+SDRDARFTSKFWKGLQLALGTRLDF+TAFH
Subjt:  PGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGKLYMTEIVRVHGVPISIISDRDARFTSKFWKGLQLALGTRLDFNTAFH

Query:  PQTDGQTERLNQILEDMLRVCVLEFSGSWDSHLHLMEFAYNNRYQATIGMASFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS
        PQTDGQTERLNQILEDMLRVCVLEFS SWDSHLHLMEFAYNN YQATIGMA FEALYGKCCRS VCW EVGE+RMLGPELVQTTNAAIQKIRARMLT QS
Subjt:  PQTDGQTERLNQILEDMLRVCVLEFSGSWDSHLHLMEFAYNNRYQATIGMASFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS

Query:  RQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFVKKGKLSPCFVGPFEILERISPVAYRLALPPSFAATQHMWWTS
        RQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFVKKGKLSP FVGPFEILERI PVAYRLALPPSFAA   ++  S
Subjt:  RQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFVKKGKLSPCFVGPFEILERISPVAYRLALPPSFAATQHMWWTS

TrEMBL top hitse value%identityAlignment
A0A5A7SSL3 Reverse transcriptase1.3e-20593.1Show/hide
Query:  MVETGQGEDFSISSDDGLMFEGRLCVPKDIAVRTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQVKAPRQCPAGLLQPLSV
        MVETGQGEDFSIS+DDGLMFEGRLCVP+D AV+TELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQVK+PRQ PAGL+Q LSV
Subjt:  MVETGQGEDFSISSDDGLMFEGRLCVPKDIAVRTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQVKAPRQCPAGLLQPLSV

Query:  PGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGKLYMTEIVRVHGVPISIISDRDARFTSKFWKGLQLALGTRLDFNTAFH
        PGWKWESVSMDFIT LPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWG+LYMTEIVR+HGVP+SIISDRDARFTSKFWKGLQLALGTRLDF+TAFH
Subjt:  PGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGKLYMTEIVRVHGVPISIISDRDARFTSKFWKGLQLALGTRLDFNTAFH

Query:  PQTDGQTERLNQILEDMLRVCVLEFSGSWDSHLHLMEFAYNNRYQATIGMASFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS
        PQTDGQTERLNQILEDMLR CVLEFSGSWDSHLHLMEFAYNN YQATIGMA FEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS
Subjt:  PQTDGQTERLNQILEDMLRVCVLEFSGSWDSHLHLMEFAYNNRYQATIGMASFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS

Query:  RQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFVKKGKLSPCFVGPFEILERISPVAYRLALPPSFAATQHMWWTS
        RQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF KKGKLSP FVGPFEILERI PVAYRLALPPSFAA   ++  S
Subjt:  RQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFVKKGKLSPCFVGPFEILERISPVAYRLALPPSFAATQHMWWTS

A0A5A7SXW6 Reverse transcriptase1.7e-20593.63Show/hide
Query:  MVETGQGEDFSISSDDGLMFEGRLCVPKDIAVRTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQVKAPRQCPAGLLQPLSV
        MVETGQGEDFSISSDDGLMFEGRLCVP+D AV+ ELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQVKAPRQ PAGLLQPLSV
Subjt:  MVETGQGEDFSISSDDGLMFEGRLCVPKDIAVRTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQVKAPRQCPAGLLQPLSV

Query:  PGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGKLYMTEIVRVHGVPISIISDRDARFTSKFWKGLQLALGTRLDFNTAFH
        PGWKWESVSMDFIT LPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWG+LYMTEIVR+HGVP+SIISDRDARFTSKFWKGLQLALGTRLDF+T FH
Subjt:  PGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGKLYMTEIVRVHGVPISIISDRDARFTSKFWKGLQLALGTRLDFNTAFH

Query:  PQTDGQTERLNQILEDMLRVCVLEFSGSWDSHLHLMEFAYNNRYQATIGMASFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS
        PQTDGQTERLNQILEDMLR CVLEFSGSWDSHLHLMEFAYNN YQATIGMASFEALYGKC RSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS
Subjt:  PQTDGQTERLNQILEDMLRVCVLEFSGSWDSHLHLMEFAYNNRYQATIGMASFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS

Query:  RQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFVKKGKLSPCFVGPFEILERISPVAYRLALPPSFAATQHMWWTS
        RQKSYADVR KDLEFEVGDMVFLKVAPMKGVLRFVKKGKLSP FVGPFEILERI PVAYRLALPPSFAA   ++  S
Subjt:  RQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFVKKGKLSPCFVGPFEILERISPVAYRLALPPSFAATQHMWWTS

A0A5A7TBV4 Pol protein1.3e-20593.37Show/hide
Query:  MVETGQGEDFSISSDDGLMFEGRLCVPKDIAVRTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQVKAPRQCPAGLLQPLSV
        MVETGQGEDFSISSDDGLMFEGRLCVP+D AV+TELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQVKAPRQ PAGLLQPLSV
Subjt:  MVETGQGEDFSISSDDGLMFEGRLCVPKDIAVRTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQVKAPRQCPAGLLQPLSV

Query:  PGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGKLYMTEIVRVHGVPISIISDRDARFTSKFWKGLQLALGTRLDFNTAFH
        PGWKWESVSMDFIT LPKTLKG+TVIWVVVDRLTKSAHFVPGKSTYTASKWG+LYMTEIVR+HGVP+SIISDRDARFTSKFWKGLQLALGTRLDF+TAFH
Subjt:  PGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGKLYMTEIVRVHGVPISIISDRDARFTSKFWKGLQLALGTRLDFNTAFH

Query:  PQTDGQTERLNQILEDMLRVCVLEFSGSWDSHLHLMEFAYNNRYQATIGMASFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS
        PQTDGQTERLNQILEDMLR CVLEFSGSWDSHLHLMEFAYNN YQATIGMA FEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS
Subjt:  PQTDGQTERLNQILEDMLRVCVLEFSGSWDSHLHLMEFAYNNRYQATIGMASFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS

Query:  RQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFVKKGKLSPCFVGPFEILERISPVAYRLALPPSFAATQHMWWTS
        RQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF KKGKLSP FVG FEILERI PVAYRLALPPSFA    ++  S
Subjt:  RQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFVKKGKLSPCFVGPFEILERISPVAYRLALPPSFAATQHMWWTS

A0A5A7TG62 Reverse transcriptase1.7e-20593.37Show/hide
Query:  MVETGQGEDFSISSDDGLMFEGRLCVPKDIAVRTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQVKAPRQCPAGLLQPLSV
        MVETGQGEDFSISSDDGLMFEGRLCVP+D AVRTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQVKAPRQCP GLLQPLSV
Subjt:  MVETGQGEDFSISSDDGLMFEGRLCVPKDIAVRTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQVKAPRQCPAGLLQPLSV

Query:  PGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGKLYMTEIVRVHGVPISIISDRDARFTSKFWKGLQLALGTRLDFNTAFH
         GWKWESVSMDFIT LPKTLKGYTVIWVVVDRLTKSAHFVP KSTYTA+KWG+LYMTEIVR+HGVP+SIISDRDARFTSKFWKGLQLALGTRLDF+TAFH
Subjt:  PGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGKLYMTEIVRVHGVPISIISDRDARFTSKFWKGLQLALGTRLDFNTAFH

Query:  PQTDGQTERLNQILEDMLRVCVLEFSGSWDSHLHLMEFAYNNRYQATIGMASFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS
        PQTDGQTERLNQILEDMLR CVLEFSGSWDSHLHLMEFAYNN YQATIGMA FEALYGKCCRS VCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS
Subjt:  PQTDGQTERLNQILEDMLRVCVLEFSGSWDSHLHLMEFAYNNRYQATIGMASFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS

Query:  RQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFVKKGKLSPCFVGPFEILERISPVAYRLALPPSFAATQHMWWTS
        RQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFVKKGK SP FVGPFEILERI PVAYRLALPPSFAA   ++  S
Subjt:  RQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFVKKGKLSPCFVGPFEILERISPVAYRLALPPSFAATQHMWWTS

A0A5A7TVN9 Reverse transcriptase1.7e-20593.37Show/hide
Query:  MVETGQGEDFSISSDDGLMFEGRLCVPKDIAVRTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQVKAPRQCPAGLLQPLSV
        MVETGQGEDFSISSDDGLMFEGRLCVP+D AV+TELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQVKAPRQ PAGLLQPLSV
Subjt:  MVETGQGEDFSISSDDGLMFEGRLCVPKDIAVRTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQVKAPRQCPAGLLQPLSV

Query:  PGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGKLYMTEIVRVHGVPISIISDRDARFTSKFWKGLQLALGTRLDFNTAFH
        PGWKWESVSMDFIT LPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWG+LY+TEIVR+HGVP+SIISDRDARFTSKFWKGLQLAL TRLDF+TAFH
Subjt:  PGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGKLYMTEIVRVHGVPISIISDRDARFTSKFWKGLQLALGTRLDFNTAFH

Query:  PQTDGQTERLNQILEDMLRVCVLEFSGSWDSHLHLMEFAYNNRYQATIGMASFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS
        PQTDGQTERLNQILEDMLR CVLEFSGSWDSHLHLMEFAYNN YQATIGMA FEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS
Subjt:  PQTDGQTERLNQILEDMLRVCVLEFSGSWDSHLHLMEFAYNNRYQATIGMASFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS

Query:  RQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFVKKGKLSPCFVGPFEILERISPVAYRLALPPSFAATQHMWWTS
        RQKSYADVRRKDLEFEVGDMVFLKV PMKGVLRF KKGKLSP FVGPFEILERI PVAYRLALPPSFAA   ++  S
Subjt:  RQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFVKKGKLSPCFVGPFEILERISPVAYRLALPPSFAATQHMWWTS

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein2.0e-4931.64Show/hide
Query:  SISSDDGLMFEGR--LCVPKDIAVRTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQVKAPRQCPAGLLQPLSVPGWKWESV
        +I   DGL+   +  + +P D  +   ++ + H     +HPG   +   +   + W+G+++++ ++V  C  CQ  K+    P G LQP+      WES+
Subjt:  SISSDDGLMFEGR--LCVPKDIAVRTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQVKAPRQCPAGLLQPLSVPGWKWESV

Query:  SMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGKLYMTEIVRVHGVPISIISDRDARFTSKFWKGLQLALGTRLDFNTAFHPQTDGQTE
        SMDFIT LP++  GY  ++VVVDR +K A  VP   + TA +  +++   ++   G P  II+D D  FTS+ WK         + F+  + PQTDGQTE
Subjt:  SMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGKLYMTEIVRVHGVPISIISDRDARFTSKFWKGLQLALGTRLDFNTAFHPQTDGQTE

Query:  RLNQILEDMLRVCVLEFSGSWDSHLHLMEFAYNNRYQATIGMASFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYAD
        R NQ +E +LR        +W  H+ L++ +YNN   +   M  FE ++      SP+   E+        E  Q T    Q ++  + T   + K Y D
Subjt:  RLNQILEDMLRVCVLEFSGSWDSHLHLMEFAYNNRYQATIGMASFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYAD

Query:  VRRKDL-EFEVGDMVFLKVAPMKGVLRFVKKGKLSPCFVGPFEILERISPVAYRLALPPSFAATQHMWWTSSH
        ++ +++ EF+ GD+V +K     G L   K  KL+P F GPF +L++  P  Y L LP S    +HM+ ++ H
Subjt:  VRRKDL-EFEVGDMVFLKVAPMKGVLRFVKKGKLSPCFVGPFEILERISPVAYRLALPPSFAATQHMWWTSSH

P0CT35 Transposon Tf2-2 polyprotein2.0e-4931.64Show/hide
Query:  SISSDDGLMFEGR--LCVPKDIAVRTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQVKAPRQCPAGLLQPLSVPGWKWESV
        +I   DGL+   +  + +P D  +   ++ + H     +HPG   +   +   + W+G+++++ ++V  C  CQ  K+    P G LQP+      WES+
Subjt:  SISSDDGLMFEGR--LCVPKDIAVRTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQVKAPRQCPAGLLQPLSVPGWKWESV

Query:  SMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGKLYMTEIVRVHGVPISIISDRDARFTSKFWKGLQLALGTRLDFNTAFHPQTDGQTE
        SMDFIT LP++  GY  ++VVVDR +K A  VP   + TA +  +++   ++   G P  II+D D  FTS+ WK         + F+  + PQTDGQTE
Subjt:  SMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGKLYMTEIVRVHGVPISIISDRDARFTSKFWKGLQLALGTRLDFNTAFHPQTDGQTE

Query:  RLNQILEDMLRVCVLEFSGSWDSHLHLMEFAYNNRYQATIGMASFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYAD
        R NQ +E +LR        +W  H+ L++ +YNN   +   M  FE ++      SP+   E+        E  Q T    Q ++  + T   + K Y D
Subjt:  RLNQILEDMLRVCVLEFSGSWDSHLHLMEFAYNNRYQATIGMASFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYAD

Query:  VRRKDL-EFEVGDMVFLKVAPMKGVLRFVKKGKLSPCFVGPFEILERISPVAYRLALPPSFAATQHMWWTSSH
        ++ +++ EF+ GD+V +K     G L   K  KL+P F GPF +L++  P  Y L LP S    +HM+ ++ H
Subjt:  VRRKDL-EFEVGDMVFLKVAPMKGVLRFVKKGKLSPCFVGPFEILERISPVAYRLALPPSFAATQHMWWTSSH

P0CT36 Transposon Tf2-3 polyprotein2.0e-4931.64Show/hide
Query:  SISSDDGLMFEGR--LCVPKDIAVRTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQVKAPRQCPAGLLQPLSVPGWKWESV
        +I   DGL+   +  + +P D  +   ++ + H     +HPG   +   +   + W+G+++++ ++V  C  CQ  K+    P G LQP+      WES+
Subjt:  SISSDDGLMFEGR--LCVPKDIAVRTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQVKAPRQCPAGLLQPLSVPGWKWESV

Query:  SMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGKLYMTEIVRVHGVPISIISDRDARFTSKFWKGLQLALGTRLDFNTAFHPQTDGQTE
        SMDFIT LP++  GY  ++VVVDR +K A  VP   + TA +  +++   ++   G P  II+D D  FTS+ WK         + F+  + PQTDGQTE
Subjt:  SMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGKLYMTEIVRVHGVPISIISDRDARFTSKFWKGLQLALGTRLDFNTAFHPQTDGQTE

Query:  RLNQILEDMLRVCVLEFSGSWDSHLHLMEFAYNNRYQATIGMASFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYAD
        R NQ +E +LR        +W  H+ L++ +YNN   +   M  FE ++      SP+   E+        E  Q T    Q ++  + T   + K Y D
Subjt:  RLNQILEDMLRVCVLEFSGSWDSHLHLMEFAYNNRYQATIGMASFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYAD

Query:  VRRKDL-EFEVGDMVFLKVAPMKGVLRFVKKGKLSPCFVGPFEILERISPVAYRLALPPSFAATQHMWWTSSH
        ++ +++ EF+ GD+V +K     G L   K  KL+P F GPF +L++  P  Y L LP S    +HM+ ++ H
Subjt:  VRRKDL-EFEVGDMVFLKVAPMKGVLRFVKKGKLSPCFVGPFEILERISPVAYRLALPPSFAATQHMWWTSSH

P0CT41 Transposon Tf2-12 polyprotein2.0e-4931.64Show/hide
Query:  SISSDDGLMFEGR--LCVPKDIAVRTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQVKAPRQCPAGLLQPLSVPGWKWESV
        +I   DGL+   +  + +P D  +   ++ + H     +HPG   +   +   + W+G+++++ ++V  C  CQ  K+    P G LQP+      WES+
Subjt:  SISSDDGLMFEGR--LCVPKDIAVRTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQVKAPRQCPAGLLQPLSVPGWKWESV

Query:  SMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGKLYMTEIVRVHGVPISIISDRDARFTSKFWKGLQLALGTRLDFNTAFHPQTDGQTE
        SMDFIT LP++  GY  ++VVVDR +K A  VP   + TA +  +++   ++   G P  II+D D  FTS+ WK         + F+  + PQTDGQTE
Subjt:  SMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGKLYMTEIVRVHGVPISIISDRDARFTSKFWKGLQLALGTRLDFNTAFHPQTDGQTE

Query:  RLNQILEDMLRVCVLEFSGSWDSHLHLMEFAYNNRYQATIGMASFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYAD
        R NQ +E +LR        +W  H+ L++ +YNN   +   M  FE ++      SP+   E+        E  Q T    Q ++  + T   + K Y D
Subjt:  RLNQILEDMLRVCVLEFSGSWDSHLHLMEFAYNNRYQATIGMASFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYAD

Query:  VRRKDL-EFEVGDMVFLKVAPMKGVLRFVKKGKLSPCFVGPFEILERISPVAYRLALPPSFAATQHMWWTSSH
        ++ +++ EF+ GD+V +K     G L   K  KL+P F GPF +L++  P  Y L LP S    +HM+ ++ H
Subjt:  VRRKDL-EFEVGDMVFLKVAPMKGVLRFVKKGKLSPCFVGPFEILERISPVAYRLALPPSFAATQHMWWTSSH

Q9UR07 Transposon Tf2-11 polyprotein2.0e-4931.64Show/hide
Query:  SISSDDGLMFEGR--LCVPKDIAVRTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQVKAPRQCPAGLLQPLSVPGWKWESV
        +I   DGL+   +  + +P D  +   ++ + H     +HPG   +   +   + W+G+++++ ++V  C  CQ  K+    P G LQP+      WES+
Subjt:  SISSDDGLMFEGR--LCVPKDIAVRTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQVKAPRQCPAGLLQPLSVPGWKWESV

Query:  SMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGKLYMTEIVRVHGVPISIISDRDARFTSKFWKGLQLALGTRLDFNTAFHPQTDGQTE
        SMDFIT LP++  GY  ++VVVDR +K A  VP   + TA +  +++   ++   G P  II+D D  FTS+ WK         + F+  + PQTDGQTE
Subjt:  SMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGKLYMTEIVRVHGVPISIISDRDARFTSKFWKGLQLALGTRLDFNTAFHPQTDGQTE

Query:  RLNQILEDMLRVCVLEFSGSWDSHLHLMEFAYNNRYQATIGMASFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYAD
        R NQ +E +LR        +W  H+ L++ +YNN   +   M  FE ++      SP+   E+        E  Q T    Q ++  + T   + K Y D
Subjt:  RLNQILEDMLRVCVLEFSGSWDSHLHLMEFAYNNRYQATIGMASFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYAD

Query:  VRRKDL-EFEVGDMVFLKVAPMKGVLRFVKKGKLSPCFVGPFEILERISPVAYRLALPPSFAATQHMWWTSSH
        ++ +++ EF+ GD+V +K     G L   K  KL+P F GPF +L++  P  Y L LP S    +HM+ ++ H
Subjt:  VRRKDL-EFEVGDMVFLKVAPMKGVLRFVKKGKLSPCFVGPFEILERISPVAYRLALPPSFAATQHMWWTSSH

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAGAGACAGGGCAAGGTGAGGACTTCTCCATATCCTCTGACGATGGCCTTATGTTTGAGGGACGCTTGTGTGTGCCGAAAGACATCGCAGTCAGGACAGAGCTTTT
GACTGAGGCTCACAGTTCCCCGTTTACCATGCACCCTGGGAGTACGAAGATGTACCAGGACTTAAGGAGTGTCTATTGGTGGAGGGGCATGAAGAGGGAAGTGGCAGACT
TTGTCAGCAGGTGCTTGGTGTGCCAGCAGGTGAAGGCACCTAGACAGTGTCCAGCCGGGTTGTTGCAACCCTTGAGTGTGCCAGGGTGGAAGTGGGAGAGTGTGTCGATG
GATTTTATTACGAGACTGCCCAAGACCCTAAAGGGCTATACAGTGATCTGGGTTGTTGTCGACAGACTCACGAAGTCGGCCCATTTCGTGCCAGGGAAATCCACTTATAC
TGCCAGTAAGTGGGGGAAATTATATATGACAGAAATCGTGAGAGTACATGGAGTACCCATATCCATCATTTCAGACAGAGACGCTCGTTTCACATCGAAGTTCTGGAAAG
GACTTCAACTTGCATTAGGTACGAGGTTAGACTTCAACACGGCATTCCACCCTCAGACTGATGGTCAGACAGAGAGATTGAACCAGATTTTGGAAGACATGCTGCGGGTC
TGCGTGCTAGAGTTTTCAGGAAGTTGGGACTCTCATCTGCATCTGATGGAGTTTGCCTATAATAACAGGTACCAAGCTACTATCGGTATGGCATCGTTTGAGGCTCTGTA
TGGCAAGTGCTGTAGATCTCCTGTCTGCTGGGGCGAGGTTGGAGAGCAGAGGATGCTAGGCCCCGAGTTAGTGCAGACTACCAATGCAGCCATACAGAAGATCCGAGCTC
GTATGCTGACAGCACAGAGCAGACAGAAGAGTTATGCTGATGTACGACGTAAGGATCTCGAGTTTGAAGTGGGAGATATGGTCTTTCTGAAGGTAGCACCTATGAAGGGT
GTTCTGAGGTTCGTGAAGAAGGGGAAGCTGAGTCCATGCTTCGTAGGGCCGTTTGAGATACTGGAGCGGATTAGCCCCGTGGCTTATCGCTTGGCGCTACCCCCATCTTT
TGCTGCAACCCAACACATGTGGTGGACTTCGAGCCACTACAAATCAGCGAGAACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTAGAGACAGGGCAAGGTGAGGACTTCTCCATATCCTCTGACGATGGCCTTATGTTTGAGGGACGCTTGTGTGTGCCGAAAGACATCGCAGTCAGGACAGAGCTTTT
GACTGAGGCTCACAGTTCCCCGTTTACCATGCACCCTGGGAGTACGAAGATGTACCAGGACTTAAGGAGTGTCTATTGGTGGAGGGGCATGAAGAGGGAAGTGGCAGACT
TTGTCAGCAGGTGCTTGGTGTGCCAGCAGGTGAAGGCACCTAGACAGTGTCCAGCCGGGTTGTTGCAACCCTTGAGTGTGCCAGGGTGGAAGTGGGAGAGTGTGTCGATG
GATTTTATTACGAGACTGCCCAAGACCCTAAAGGGCTATACAGTGATCTGGGTTGTTGTCGACAGACTCACGAAGTCGGCCCATTTCGTGCCAGGGAAATCCACTTATAC
TGCCAGTAAGTGGGGGAAATTATATATGACAGAAATCGTGAGAGTACATGGAGTACCCATATCCATCATTTCAGACAGAGACGCTCGTTTCACATCGAAGTTCTGGAAAG
GACTTCAACTTGCATTAGGTACGAGGTTAGACTTCAACACGGCATTCCACCCTCAGACTGATGGTCAGACAGAGAGATTGAACCAGATTTTGGAAGACATGCTGCGGGTC
TGCGTGCTAGAGTTTTCAGGAAGTTGGGACTCTCATCTGCATCTGATGGAGTTTGCCTATAATAACAGGTACCAAGCTACTATCGGTATGGCATCGTTTGAGGCTCTGTA
TGGCAAGTGCTGTAGATCTCCTGTCTGCTGGGGCGAGGTTGGAGAGCAGAGGATGCTAGGCCCCGAGTTAGTGCAGACTACCAATGCAGCCATACAGAAGATCCGAGCTC
GTATGCTGACAGCACAGAGCAGACAGAAGAGTTATGCTGATGTACGACGTAAGGATCTCGAGTTTGAAGTGGGAGATATGGTCTTTCTGAAGGTAGCACCTATGAAGGGT
GTTCTGAGGTTCGTGAAGAAGGGGAAGCTGAGTCCATGCTTCGTAGGGCCGTTTGAGATACTGGAGCGGATTAGCCCCGTGGCTTATCGCTTGGCGCTACCCCCATCTTT
TGCTGCAACCCAACACATGTGGTGGACTTCGAGCCACTACAAATCAGCGAGAACTTGA
Protein sequenceShow/hide protein sequence
MVETGQGEDFSISSDDGLMFEGRLCVPKDIAVRTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQVKAPRQCPAGLLQPLSVPGWKWESVSM
DFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGKLYMTEIVRVHGVPISIISDRDARFTSKFWKGLQLALGTRLDFNTAFHPQTDGQTERLNQILEDMLRV
CVLEFSGSWDSHLHLMEFAYNNRYQATIGMASFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKG
VLRFVKKGKLSPCFVGPFEILERISPVAYRLALPPSFAATQHMWWTSSHYKSART