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Cmc08g0226581 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc08g0226581
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRING/FYVE/PHD zinc finger superfamily protein, putative isoform 1
Genome locationCMiso1.1chr08:18856512..18857748
RNA-Seq ExpressionCmc08g0226581
SyntenyCmc08g0226581
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016020 - membrane (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060071.1 RING/FYVE/PHD zinc finger superfamily protein, putative isoform 1 [Cucumis melo var. makuwa]9.6e-27100Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLHHTAIHTIRAYPRFRLAFSRLFASFFRVSYSR
        MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLHHTAIHTIRAYPRFRLAFSRLFASFFRVSYSR
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLHHTAIHTIRAYPRFRLAFSRLFASFFRVSYSR

KAE8649764.1 hypothetical protein Csa_012384 [Cucumis sativus]9.2e-3083.7Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLHHTAIHTIRAYPRFRLAFSRLFASFFRVSYSRDLGSWILTVESLFVVVYGSNIFVW
        MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLHHTAIHTIRAYPRFRLAFSRLFAS FRVSYSR+LGSWIL +  L  ++Y   IF++
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLHHTAIHTIRAYPRFRLAFSRLFASFFRVSYSRDLGSWILTVESLFVVVYGSNIFVW

KAG6595630.1 hypothetical protein SDJN03_12183, partial [Cucurbita argyrosperma subsp. sororia]8.7e-2083.82Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLHHTAIHTIRAYPRFRLAFSRLFASFFRVSYSR
        MLQLFFAVAFSAVPLTLYVPPIRSL+LFVETLE+LL  +A HT+R YPRFR AFSRLFAS FRVS SR
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLHHTAIHTIRAYPRFRLAFSRLFASFFRVSYSR

KAG6603254.1 hypothetical protein SDJN03_03863, partial [Cucurbita argyrosperma subsp. sororia]9.3e-2278.95Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLHHTAIHTIRAYPRFRLAFSRLFASFFRVSYSRDLGSWILT
        MLQLFFAVAFSA PLT YVPPIRSL+LFVETLEDL  HTA HT RAYPRFRLAFSR+F S FRVSYSR  G  +L+
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLHHTAIHTIRAYPRFRLAFSRLFASFFRVSYSRDLGSWILT

KAG7037385.1 hypothetical protein SDJN02_01010, partial [Cucurbita argyrosperma subsp. argyrosperma]9.3e-2278.95Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLHHTAIHTIRAYPRFRLAFSRLFASFFRVSYSRDLGSWILT
        MLQLFFAVAFSA PLT YVPPIRSL+LFVETLEDL  HTA HT RAYPRFRLAFSR+F S FRVSYSR  G  +L+
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLHHTAIHTIRAYPRFRLAFSRLFASFFRVSYSRDLGSWILT

TrEMBL top hitse value%identityAlignment
A0A0A0KZF7 Uncharacterized protein4.5e-3083.7Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLHHTAIHTIRAYPRFRLAFSRLFASFFRVSYSRDLGSWILTVESLFVVVYGSNIFVW
        MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLHHTAIHTIRAYPRFRLAFSRLFAS FRVSYSR+LGSWIL +  L  ++Y   IF++
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLHHTAIHTIRAYPRFRLAFSRLFASFFRVSYSRDLGSWILTVESLFVVVYGSNIFVW

A0A2C9V7E1 Uncharacterized protein3.9e-1878.46Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLHHTAIHTIRAYPRFRLAFSRLFASFFRVS
        MLQLFFAVAFSAVPLTLYVPPIRSL+ FVET+EDLL  TA +++RAYPRFRLAFSR+F++ FR+S
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLHHTAIHTIRAYPRFRLAFSRLFASFFRVS

A0A5A7V2T5 RING/FYVE/PHD zinc finger superfamily protein, putative isoform 14.6e-27100Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLHHTAIHTIRAYPRFRLAFSRLFASFFRVSYSR
        MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLHHTAIHTIRAYPRFRLAFSRLFASFFRVSYSR
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLHHTAIHTIRAYPRFRLAFSRLFASFFRVSYSR

A0A6P6AMB2 uncharacterized protein LOC111310902 isoform X11.9e-1775.38Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLHHTAIHTIRAYPRFRLAFSRLFASFFRVS
        MLQLFFAVAFSAVPLTLYVPPIRSL+LFVET+ED+L  T ++T+RAYPR RL FSR+F S F +S
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLHHTAIHTIRAYPRFRLAFSRLFASFFRVS

A0A6P6AMC9 uncharacterized protein LOC111310902 isoform X21.9e-1775.38Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLHHTAIHTIRAYPRFRLAFSRLFASFFRVS
        MLQLFFAVAFSAVPLTLYVPPIRSL+LFVET+ED+L  T ++T+RAYPR RL FSR+F S F +S
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLHHTAIHTIRAYPRFRLAFSRLFASFFRVS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G52105.1 unknown protein1.7e-1355.56Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLHHTAIHTIRAYPRFRLAFSRLFASFFRVSYSRDLGS
        MLQLFF +AFSA PLTLY+PPIR L++FVET+E++     +++ R +PR R+A+SRL   FF  S SR L S
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLHHTAIHTIRAYPRFRLAFSRLFASFFRVSYSRDLGS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTCAGCTGTTCTTCGCCGTCGCTTTCTCGGCCGTGCCATTAACGCTCTATGTGCCGCCGATTCGTAGCCTTAGTTTGTTCGTTGAAACCCTAGAAGATCTTCTCCA
TCACACCGCCATTCATACCATCAGAGCTTATCCTCGCTTTCGCCTTGCCTTCTCTCGCCTCTTCGCCTCCTTTTTCCGCGTTTCTTATTCCAGGGATCTTGGATCTTGGA
TATTGACTGTTGAATCTCTCTTCGTTGTTGTATATGGAAGTAATATTTTTGTTTGGAATCATTTCTGA
mRNA sequenceShow/hide mRNA sequence
TTTTTGAGAGAGGAGTATTCTTGAAAAAAGAAGAAAGTATTCTTGGAGAACAAGGTGTGATCATTGGGTGTGATAAAATTACAAAAAAGAATAGACTTTAAATTACAAAA
ACTGCCCAATTGACCTTCGTTTTATATGTAAAACAAAACAACTAGAGAAGAGAACCAAAAATCATTTCCAATGGGCTCTCATAGTAATCCTTTCAATTCTCCTCTTCAAT
TTTCCCCCTGATTTCAATTTCTTTTCATCCCTTATCTTCTCCCCTCAATTCTCTATTTATATTAATCCAATTTCCACATCTTCCTTCTTCATTTACCTCTTCCTTCTTCA
TCTCTGATCCAACCAAAGCTCCAATGCTTCAGCTGTTCTTCGCCGTCGCTTTCTCGGCCGTGCCATTAACGCTCTATGTGCCGCCGATTCGTAGCCTTAGTTTGTTCGTT
GAAACCCTAGAAGATCTTCTCCATCACACCGCCATTCATACCATCAGAGCTTATCCTCGCTTTCGCCTTGCCTTCTCTCGCCTCTTCGCCTCCTTTTTCCGCGTTTCTTA
TTCCAGGGATCTTGGATCTTGGATATTGACTGTTGAATCTCTCTTCGTTGTTGTATATGGAAGTAATATTTTTGTTTGGAATCATTTCTGATGATGGACTTTCGTTTCGT
TTCGTTTCGTTCTTCTTTGATTCTGTTTCCGATCTGCTCAAAGCTTTGGATTGTTTGGATTCTCTGTTTTTGTTCTTCTTTTCTCTTATAATAAGAACATCTAGATGCTA
TTTCTTATGCAGATTTATGAAATTGATTCAATTTTGTTCAAATTCACTTCGTTAACTCTGGATTTTCAGTTTTTACCAAACGCGGAAGAAGCAAGAACATAATACCTCTA
CTCTCTGTCGCTCTCTACCTTTCAACCTCTTTTCTTCTTCTTTGAAAAACACACAAAAAAAGGTCAAGTCATTTTTCTTCGTAATTGTTTTGAAATCTTGATTTCATTAT
ATAATTCTAATGCATATTTTTTTAAGACTATTGAAAACTATTTATTTATTTATTTACTTTTGTTGATATAAGATAAGAATAAGGTCGGAATCTCATATGAGTTCGAATAA
TTCAAGACTAGACATTATTACAGGGCC
Protein sequenceShow/hide protein sequence
MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLHHTAIHTIRAYPRFRLAFSRLFASFFRVSYSRDLGSWILTVESLFVVVYGSNIFVWNHF