CuGenDBv2

Gene ID	Cmc08g0226771
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Gag-Pol
Genome location	CMiso1.1chr08:19156340..19156678
RNA-Seq Expression	Cmc08g0226771
Synteny	Cmc08g0226771
Gene Ontology terms	GO:0045489 - pectin biosynthetic process (biological process) GO:0006281 - DNA repair (biological process) GO:0006355 - regulation of transcription, DNA-templated (biological process) GO:0006508 - proteolysis (biological process) GO:0006629 - lipid metabolic process (biological process) GO:0016567 - protein ubiquitination (biological process) GO:0015074 - DNA integration (biological process) GO:0015979 - photosynthesis (biological process) GO:0005634 - nucleus (cellular component) GO:0005737 - cytoplasm (cellular component) GO:0009654 - photosystem II oxygen evolving complex (cellular component) GO:0008234 - cysteine-type peptidase activity (molecular function) GO:0047262 - polygalacturonate 4-alpha-galacturonosyltransferase activity (molecular function) GO:0046982 - protein heterodimerization activity (molecular function) GO:0020037 - heme binding (molecular function) GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (molecular function) GO:0016298 - lipase activity (molecular function) GO:0008270 - zinc ion binding (molecular function) GO:0003676 - nucleic acid binding (molecular function) GO:0005506 - iron ion binding (molecular function) GO:0004842 - ubiquitin-protein transferase activity (molecular function) GO:0004497 - monooxygenase activity (molecular function) GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

GEY37770.1 retrovirus-related Pol polyprotein from transposon TNT 1-94 [Tanacetum cinerariifolium]

5.9e-44

77.68

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Query:  MSTIEVEYIAATQASKEAIWLKMLLEELGHEHKKISLFCDNQNALYLARNPAFHAKTKHIRVQYHFIHEKVEEGIIDMHKIHTKENLADYLTKAVNTDKF
        MSTI+ EY+AA QASKEA+WLKMLLEELGHE +KI+LFCDNQ+ALYLARNP FH+KTKHIRVQYHFI EKVEEG +DM KIHT +N++DYLTKA+N DKF
Subjt:  MSTIEVEYIAATQASKEAIWLKMLLEELGHEHKKISLFCDNQNALYLARNPAFHAKTKHIRVQYHFIHEKVEEGIIDMHKIHTKENLADYLTKAVNTDKF

Query:  IWCQSSNSLAET
        IWC+SS  LA+T
Subjt:  IWCQSSNSLAET

KAA0060043.1 Gag-Pol [Cucumis melo var. makuwa]

1.4e-56

100

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Query:  MSTIEVEYIAATQASKEAIWLKMLLEELGHEHKKISLFCDNQNALYLARNPAFHAKTKHIRVQYHFIHEKVEEGIIDMHKIHTKENLADYLTKAVNTDKF
        MSTIEVEYIAATQASKEAIWLKMLLEELGHEHKKISLFCDNQNALYLARNPAFHAKTKHIRVQYHFIHEKVEEGIIDMHKIHTKENLADYLTKAVNTDKF
Subjt:  MSTIEVEYIAATQASKEAIWLKMLLEELGHEHKKISLFCDNQNALYLARNPAFHAKTKHIRVQYHFIHEKVEEGIIDMHKIHTKENLADYLTKAVNTDKF

Query:  IWCQSSNSLAET
        IWCQSSNSLAET
Subjt:  IWCQSSNSLAET

KAA0067221.1 Gag-Pol [Cucumis melo var. makuwa]

2.7e-44

83.81

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Query:  MSTIEVEYIAATQASKEAIWLKMLLEELGHEHKKISLFCDNQNALYLARNPAFHAKTKHIRVQYHFIHEKVEEGIIDMHKIHTKENLADYLTKAVNTDKF
        MS  + EY+AATQASKE  WLKM+LE+L HEHKKISLFC NQ+ALYLARNPAFHAKTKHIRVQYHF+HEKVEEGIIDMHK+HTKENL DYLTKAVN DKF
Subjt:  MSTIEVEYIAATQASKEAIWLKMLLEELGHEHKKISLFCDNQNALYLARNPAFHAKTKHIRVQYHFIHEKVEEGIIDMHKIHTKENLADYLTKAVNTDKF

Query:  IWCQS
        IWC+S
Subjt:  IWCQS

TYK06685.1 Gag-Pol [Cucumis melo var. makuwa]

1.9e-50

88.39

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Query:  MSTIEVEYIAATQASKEAIWLKMLLEELGHEHKKISLFCDNQNALYLARNPAFHAKTKHIRVQYHFIHEKVEEGIIDMHKIHTKENLADYLTKAVNTDKF
        MST EVEY+AATQ SKE +WLKMLLEEL HEHKKISLFCDNQ+ALYLARNPAFHAKTKHIRVQYHF+ EKVEEGIIDMHKIHTKENLADYLTK VNTDKF
Subjt:  MSTIEVEYIAATQASKEAIWLKMLLEELGHEHKKISLFCDNQNALYLARNPAFHAKTKHIRVQYHFIHEKVEEGIIDMHKIHTKENLADYLTKAVNTDKF

Query:  IWCQSSNSLAET
        IWC+SSN L ET
Subjt:  IWCQSSNSLAET

TYK21896.1 Gag-Pol [Cucumis melo var. makuwa]

1.2e-55

99.11

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Query:  MSTIEVEYIAATQASKEAIWLKMLLEELGHEHKKISLFCDNQNALYLARNPAFHAKTKHIRVQYHFIHEKVEEGIIDMHKIHTKENLADYLTKAVNTDKF
        MSTIEVEYIAATQASKEAIWLKMLLEELGHEHKKISLFCDNQNALYLARNPAFHAKTKHIRVQYHFI EKVEEGIIDMHKIHTKENLADYLTKAVNTDKF
Subjt:  MSTIEVEYIAATQASKEAIWLKMLLEELGHEHKKISLFCDNQNALYLARNPAFHAKTKHIRVQYHFIHEKVEEGIIDMHKIHTKENLADYLTKAVNTDKF

Query:  IWCQSSNSLAET
        IWCQSSNSLAET
Subjt:  IWCQSSNSLAET

TrEMBL top hits

e value

%identity

Alignment

A0A5A7UVP5 Gag-Pol

6.6e-57

100

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Query:  MSTIEVEYIAATQASKEAIWLKMLLEELGHEHKKISLFCDNQNALYLARNPAFHAKTKHIRVQYHFIHEKVEEGIIDMHKIHTKENLADYLTKAVNTDKF
        MSTIEVEYIAATQASKEAIWLKMLLEELGHEHKKISLFCDNQNALYLARNPAFHAKTKHIRVQYHFIHEKVEEGIIDMHKIHTKENLADYLTKAVNTDKF
Subjt:  MSTIEVEYIAATQASKEAIWLKMLLEELGHEHKKISLFCDNQNALYLARNPAFHAKTKHIRVQYHFIHEKVEEGIIDMHKIHTKENLADYLTKAVNTDKF

Query:  IWCQSSNSLAET
        IWCQSSNSLAET
Subjt:  IWCQSSNSLAET

A0A5A7VNN0 Gag-Pol

1.3e-44

83.81

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Query:  MSTIEVEYIAATQASKEAIWLKMLLEELGHEHKKISLFCDNQNALYLARNPAFHAKTKHIRVQYHFIHEKVEEGIIDMHKIHTKENLADYLTKAVNTDKF
        MS  + EY+AATQASKE  WLKM+LE+L HEHKKISLFC NQ+ALYLARNPAFHAKTKHIRVQYHF+HEKVEEGIIDMHK+HTKENL DYLTKAVN DKF
Subjt:  MSTIEVEYIAATQASKEAIWLKMLLEELGHEHKKISLFCDNQNALYLARNPAFHAKTKHIRVQYHFIHEKVEEGIIDMHKIHTKENLADYLTKAVNTDKF

Query:  IWCQS
        IWC+S
Subjt:  IWCQS

A0A5D3C5M6 Gag-Pol

9.2e-51

88.39

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Query:  MSTIEVEYIAATQASKEAIWLKMLLEELGHEHKKISLFCDNQNALYLARNPAFHAKTKHIRVQYHFIHEKVEEGIIDMHKIHTKENLADYLTKAVNTDKF
        MST EVEY+AATQ SKE +WLKMLLEEL HEHKKISLFCDNQ+ALYLARNPAFHAKTKHIRVQYHF+ EKVEEGIIDMHKIHTKENLADYLTK VNTDKF
Subjt:  MSTIEVEYIAATQASKEAIWLKMLLEELGHEHKKISLFCDNQNALYLARNPAFHAKTKHIRVQYHFIHEKVEEGIIDMHKIHTKENLADYLTKAVNTDKF

Query:  IWCQSSNSLAET
        IWC+SSN L ET
Subjt:  IWCQSSNSLAET

A0A5D3DE76 Gag-Pol

5.6e-56

99.11

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Query:  MSTIEVEYIAATQASKEAIWLKMLLEELGHEHKKISLFCDNQNALYLARNPAFHAKTKHIRVQYHFIHEKVEEGIIDMHKIHTKENLADYLTKAVNTDKF
        MSTIEVEYIAATQASKEAIWLKMLLEELGHEHKKISLFCDNQNALYLARNPAFHAKTKHIRVQYHFI EKVEEGIIDMHKIHTKENLADYLTKAVNTDKF
Subjt:  MSTIEVEYIAATQASKEAIWLKMLLEELGHEHKKISLFCDNQNALYLARNPAFHAKTKHIRVQYHFIHEKVEEGIIDMHKIHTKENLADYLTKAVNTDKF

Query:  IWCQSSNSLAET
        IWCQSSNSLAET
Subjt:  IWCQSSNSLAET

A0A699HME6 Gag-Pol polyprotein

7.1e-43

74.11

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Query:  MSTIEVEYIAATQASKEAIWLKMLLEELGHEHKKISLFCDNQNALYLARNPAFHAKTKHIRVQYHFIHEKVEEGIIDMHKIHTKENLADYLTKAVNTDKF
        MST+E EY+ A QASKEA+WLKMLLEE+GH+ +KI+LFCDNQ+ALYLARNPAFH+KTKHIRVQYHFI +KV+EGI+DMHKI+T +N+ADYL KA+N DKF
Subjt:  MSTIEVEYIAATQASKEAIWLKMLLEELGHEHKKISLFCDNQNALYLARNPAFHAKTKHIRVQYHFIHEKVEEGIIDMHKIHTKENLADYLTKAVNTDKF

Query:  IWCQSSNSLAET
        IWC+S+  LA+T
Subjt:  IWCQSSNSLAET

SwissProt top hits

e value

%identity

Alignment

P04146 Copia protein

6.7e-14

37.62

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Query:  STIEVEYIAATQASKEAIWLKMLLEELGHE-HKKISLFCDNQNALYLARNPAFHAKTKHIRVQYHFIHEKVEEGIIDMHKIHTKENLADYLTKAVNTDKF
        S+ E EY+A  +A +EA+WLK LL  +  +    I ++ DNQ  + +A NP+ H + KHI ++YHF  E+V+  +I +  I T+  LAD  TK +   +F
Subjt:  STIEVEYIAATQASKEAIWLKMLLEELGHE-HKKISLFCDNQNALYLARNPAFHAKTKHIRVQYHFIHEKVEEGIIDMHKIHTKENLADYLTKAVNTDKF

Query:  I
        +
Subjt:  I

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94

1.3e-22

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Query:  MSTIEVEYIAATQASKEAIWLKMLLEELGHEHKKISLFCDNQNALYLARNPAFHAKTKHIRVQYHFIHEKVEEGIIDMHKIHTKENLADYLTKAVNTDKF
        +ST E EYIAAT+  KE IWLK  L+ELG   K+  ++CD+Q+A+ L++N  +HA+TKHI V+YH+I E V++  + + KI T EN AD LTK V  +KF
Subjt:  MSTIEVEYIAATQASKEAIWLKMLLEELGHEHKKISLFCDNQNALYLARNPAFHAKTKHIRVQYHFIHEKVEEGIIDMHKIHTKENLADYLTKAVNTDKF

Query:  IWCQ
          C+
Subjt:  IWCQ

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1

2.5e-13

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Query:  STIEVEYIAATQASKEAIWLKMLLEELG-HEHKKISLFCDNQNALYLARNPAFHAKTKHIRVQYHFIHEKVEEGIIDMHKIHTKENLADYLTKAVNTDKF
        S+ E EY +    S E  W+  LL ELG    +   ++CDN  A YL  NP FH++ KHI + YHFI  +V+ G + +  + T + LAD LTK ++   F
Subjt:  STIEVEYIAATQASKEAIWLKMLLEELG-HEHKKISLFCDNQNALYLARNPAFHAKTKHIRVQYHFIHEKVEEGIIDMHKIHTKENLADYLTKAVNTDKF

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2

2.5e-13

39.6

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Query:  STIEVEYIAATQASKEAIWLKMLLEELGHE--HKKISLFCDNQNALYLARNPAFHAKTKHIRVQYHFIHEKVEEGIIDMHKIHTKENLADYLTKAVNTDK
        S+ E EY +    S E  W+  LL ELG +  H  + ++CDN  A YL  NP FH++ KHI + YHFI  +V+ G + +  + T + LAD LTK ++   
Subjt:  STIEVEYIAATQASKEAIWLKMLLEELGHE--HKKISLFCDNQNALYLARNPAFHAKTKHIRVQYHFIHEKVEEGIIDMHKIHTKENLADYLTKAVNTDK

Query:  F
        F
Subjt:  F

Arabidopsis top hits

e value

%identity

Alignment

AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8

2.8e-07

Show/hide

Query:  STIEVEYIAATQASKEAIWLKMLLEELGHE-HKKISLFCDNQNALYLARNPAFHAKTKHIRVQYHFIHEK
        S+ E EY A + A+ E +WL     EL     K   LFCDN  A+++A N  FH +TKHI    H + E+
Subjt:  STIEVEYIAATQASKEAIWLKMLLEELGHE-HKKISLFCDNQNALYLARNPAFHAKTKHIRVQYHFIHEK

Sequences

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CDS sequence

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ATGTCAACAATAGAAGTAGAATACATTGCTGCTACACAAGCTAGTAAAGAAGCAATATGGTTAAAAATGCTATTGGAAGAGCTCGGGCATGAACATAAGAAAATCTCTTT
GTTTTGTGACAATCAGAATGCCTTGTATCTTGCAAGAAATCCAGCTTTCCATGCCAAGACCAAACATATTCGAGTGCAGTACCACTTTATTCATGAGAAAGTAGAGGAAG
GAATAATAGATATGCATAAAATTCATACAAAAGAAAACCTAGCAGATTACTTGACCAAGGCAGTCAACACTGACAAGTTCATTTGGTGTCAATCCTCAAATAGCCTAGCA
GAAACATAA

mRNA sequence

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Protein sequence

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MSTIEVEYIAATQASKEAIWLKMLLEELGHEHKKISLFCDNQNALYLARNPAFHAKTKHIRVQYHFIHEKVEEGIIDMHKIHTKENLADYLTKAVNTDKFIWCQSSNSLA
ET

Cmc08g0226771 (gene) of Melon (Charmono) v1.1 genome