; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc08g0226821 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc08g0226821
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase
Genome locationCMiso1.1chr08:19269470..19270147
RNA-Seq ExpressionCmc08g0226821
SyntenyCmc08g0226821
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR041373 - Reverse transcriptase, RNase H-like domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041109.1 hypothetical protein E6C27_scaffold128G00120 [Cucumis melo var. makuwa]2.9e-122100Show/hide
Query:  MQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFYQKELNLRQRRWLELIKDYDCTIEYHPGKANVVANALSRK
        MQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFYQKELNLRQRRWLELIKDYDCTIEYHPGKANVVANALSRK
Subjt:  MQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFYQKELNLRQRRWLELIKDYDCTIEYHPGKANVVANALSRK

Query:  SRLPKSALCGIQVALLNELKGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAIL
        SRLPKSALCGIQVALLNELKGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAIL
Subjt:  SRLPKSALCGIQVALLNELKGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAIL

Query:  EEAHSSAYAMHPGSTKMYRTLKKTY
        EEAHSSAYAMHPGSTKMYRTLKKTY
Subjt:  EEAHSSAYAMHPGSTKMYRTLKKTY

KAA0042295.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.0e-11998.22Show/hide
Query:  MQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFYQKELNLRQRRWLELIKDYDCTIEYHPGKANVVANALSRK
        MQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIF QKELNLRQRRWLELIKDYDCTIEYHPGKANVVA+ALSRK
Subjt:  MQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFYQKELNLRQRRWLELIKDYDCTIEYHPGKANVVANALSRK

Query:  SRLPKSALCGIQVALLNELKGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAIL
        SRLPKSALCGI+VALLNEL+GSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAIL
Subjt:  SRLPKSALCGIQVALLNELKGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAIL

Query:  EEAHSSAYAMHPGSTKMYRTLKKTY
        EEAHSSAYAMHPGSTKMYRTLKKTY
Subjt:  EEAHSSAYAMHPGSTKMYRTLKKTY

KAA0050493.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.0e-11998.22Show/hide
Query:  MQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFYQKELNLRQRRWLELIKDYDCTIEYHPGKANVVANALSRK
        MQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIF QKELNLRQRRWLELIKDYDCTIEYHPGKANVVA+ALSRK
Subjt:  MQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFYQKELNLRQRRWLELIKDYDCTIEYHPGKANVVANALSRK

Query:  SRLPKSALCGIQVALLNELKGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAIL
        SRLPKSALCGI+VALLNEL+GSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAIL
Subjt:  SRLPKSALCGIQVALLNELKGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAIL

Query:  EEAHSSAYAMHPGSTKMYRTLKKTY
        EEAHSSAYAMHPGSTKMYRTLKKTY
Subjt:  EEAHSSAYAMHPGSTKMYRTLKKTY

KAA0050527.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.0e-11998.22Show/hide
Query:  MQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFYQKELNLRQRRWLELIKDYDCTIEYHPGKANVVANALSRK
        MQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIF QKELNLRQRRWLELIKDYDCTIEYHPGKANVVA+ALSRK
Subjt:  MQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFYQKELNLRQRRWLELIKDYDCTIEYHPGKANVVANALSRK

Query:  SRLPKSALCGIQVALLNELKGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAIL
        SRLPKSALCGI+VALLNEL+GSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAIL
Subjt:  SRLPKSALCGIQVALLNELKGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAIL

Query:  EEAHSSAYAMHPGSTKMYRTLKKTY
        EEAHSSAYAMHPGSTKMYRTLKKTY
Subjt:  EEAHSSAYAMHPGSTKMYRTLKKTY

KAA0066849.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.0e-11998.22Show/hide
Query:  MQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFYQKELNLRQRRWLELIKDYDCTIEYHPGKANVVANALSRK
        MQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIF QKELNLRQRRWLELIKDYDCTIEYHPGKANVVA+ALSRK
Subjt:  MQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFYQKELNLRQRRWLELIKDYDCTIEYHPGKANVVANALSRK

Query:  SRLPKSALCGIQVALLNELKGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAIL
        SRLPKSALCGI+VALLNEL+GSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAIL
Subjt:  SRLPKSALCGIQVALLNELKGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAIL

Query:  EEAHSSAYAMHPGSTKMYRTLKKTY
        EEAHSSAYAMHPGSTKMYRTLKKTY
Subjt:  EEAHSSAYAMHPGSTKMYRTLKKTY

TrEMBL top hitse value%identityAlignment
A0A5A7T1Y5 Reverse transcriptase5.0e-12098.22Show/hide
Query:  MQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFYQKELNLRQRRWLELIKDYDCTIEYHPGKANVVANALSRK
        MQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIF QKELNLRQRRWLELIKDYDCTIEYHPGKANVVA+ALSRK
Subjt:  MQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFYQKELNLRQRRWLELIKDYDCTIEYHPGKANVVANALSRK

Query:  SRLPKSALCGIQVALLNELKGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAIL
        SRLPKSALCGI+VALLNEL+GSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAIL
Subjt:  SRLPKSALCGIQVALLNELKGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAIL

Query:  EEAHSSAYAMHPGSTKMYRTLKKTY
        EEAHSSAYAMHPGSTKMYRTLKKTY
Subjt:  EEAHSSAYAMHPGSTKMYRTLKKTY

A0A5A7TIG0 Reverse transcriptase1.4e-122100Show/hide
Query:  MQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFYQKELNLRQRRWLELIKDYDCTIEYHPGKANVVANALSRK
        MQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFYQKELNLRQRRWLELIKDYDCTIEYHPGKANVVANALSRK
Subjt:  MQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFYQKELNLRQRRWLELIKDYDCTIEYHPGKANVVANALSRK

Query:  SRLPKSALCGIQVALLNELKGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAIL
        SRLPKSALCGIQVALLNELKGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAIL
Subjt:  SRLPKSALCGIQVALLNELKGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAIL

Query:  EEAHSSAYAMHPGSTKMYRTLKKTY
        EEAHSSAYAMHPGSTKMYRTLKKTY
Subjt:  EEAHSSAYAMHPGSTKMYRTLKKTY

A0A5A7U2V7 Reverse transcriptase5.0e-12098.22Show/hide
Query:  MQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFYQKELNLRQRRWLELIKDYDCTIEYHPGKANVVANALSRK
        MQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIF QKELNLRQRRWLELIKDYDCTIEYHPGKANVVA+ALSRK
Subjt:  MQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFYQKELNLRQRRWLELIKDYDCTIEYHPGKANVVANALSRK

Query:  SRLPKSALCGIQVALLNELKGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAIL
        SRLPKSALCGI+VALLNEL+GSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAIL
Subjt:  SRLPKSALCGIQVALLNELKGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAIL

Query:  EEAHSSAYAMHPGSTKMYRTLKKTY
        EEAHSSAYAMHPGSTKMYRTLKKTY
Subjt:  EEAHSSAYAMHPGSTKMYRTLKKTY

A0A5A7UUL6 Reverse transcriptase5.0e-12098.22Show/hide
Query:  MQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFYQKELNLRQRRWLELIKDYDCTIEYHPGKANVVANALSRK
        MQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIF QKELNLRQRRWLELIKDYDCTIEYHPGKANVVA+ALSRK
Subjt:  MQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFYQKELNLRQRRWLELIKDYDCTIEYHPGKANVVANALSRK

Query:  SRLPKSALCGIQVALLNELKGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAIL
        SRLPKSALCGI+VALLNEL+GSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAIL
Subjt:  SRLPKSALCGIQVALLNELKGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAIL

Query:  EEAHSSAYAMHPGSTKMYRTLKKTY
        EEAHSSAYAMHPGSTKMYRTLKKTY
Subjt:  EEAHSSAYAMHPGSTKMYRTLKKTY

A0A5D3BHI1 Reverse transcriptase5.0e-12098.22Show/hide
Query:  MQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFYQKELNLRQRRWLELIKDYDCTIEYHPGKANVVANALSRK
        MQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIF QKELNLRQRRWLELIKDYDCTIEYHPGKANVVA+ALSRK
Subjt:  MQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFYQKELNLRQRRWLELIKDYDCTIEYHPGKANVVANALSRK

Query:  SRLPKSALCGIQVALLNELKGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAIL
        SRLPKSALCGI+VALLNEL+GSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAIL
Subjt:  SRLPKSALCGIQVALLNELKGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAIL

Query:  EEAHSSAYAMHPGSTKMYRTLKKTY
        EEAHSSAYAMHPGSTKMYRTLKKTY
Subjt:  EEAHSSAYAMHPGSTKMYRTLKKTY

SwissProt top hitse value%identityAlignment
P04323 Retrovirus-related Pol polyprotein from transposon 17.61.2e-1744.9Show/hide
Query:  QDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFYQKELNLRQRRWLELIKDYDCTIEYHPGKANVVANALSR
        QDG+ ++Y SR L EHE NY T + EL A+V A K +RHYL G    I +DH+ L +++  K+ N +  RW   + ++D  I+Y  GK N VA+ALSR
Subjt:  QDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFYQKELNLRQRRWLELIKDYDCTIEYHPGKANVVANALSR

P0CT34 Transposon Tf2-1 polyprotein1.1e-1525.58Show/hide
Query:  IAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFG--EKCHIFTDHKSL--KYIFYQKELNLRQRRWLELIKDYDCTIEYHPGKANVVANALSR---
        + Y S ++ + + NY   D E+ A++ +LK WRHYL    E   I TDH++L  +     +  N R  RW   ++D++  I Y PG AN +A+ALSR   
Subjt:  IAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFG--EKCHIFTDHKSL--KYIFYQKELNLRQRRWLELIKDYDCTIEYHPGKANVVANALSR---

Query:  -KSRLPKSALCGIQVALLNELKGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNA
            +PK                     + ++S + + Q  +      ++V   + D+ L        K +E   +L+    I  + ++ +PN ++L   
Subjt:  -KSRLPKSALCGIQVALLNELKGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNA

Query:  ILEEAHSSAYAMHPG
        I+++ H     +HPG
Subjt:  ILEEAHSSAYAMHPG

P0CT35 Transposon Tf2-2 polyprotein1.1e-1525.58Show/hide
Query:  IAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFG--EKCHIFTDHKSL--KYIFYQKELNLRQRRWLELIKDYDCTIEYHPGKANVVANALSR---
        + Y S ++ + + NY   D E+ A++ +LK WRHYL    E   I TDH++L  +     +  N R  RW   ++D++  I Y PG AN +A+ALSR   
Subjt:  IAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFG--EKCHIFTDHKSL--KYIFYQKELNLRQRRWLELIKDYDCTIEYHPGKANVVANALSR---

Query:  -KSRLPKSALCGIQVALLNELKGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNA
            +PK                     + ++S + + Q  +      ++V   + D+ L        K +E   +L+    I  + ++ +PN ++L   
Subjt:  -KSRLPKSALCGIQVALLNELKGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNA

Query:  ILEEAHSSAYAMHPG
        I+++ H     +HPG
Subjt:  ILEEAHSSAYAMHPG

P0CT41 Transposon Tf2-12 polyprotein1.1e-1525.58Show/hide
Query:  IAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFG--EKCHIFTDHKSL--KYIFYQKELNLRQRRWLELIKDYDCTIEYHPGKANVVANALSR---
        + Y S ++ + + NY   D E+ A++ +LK WRHYL    E   I TDH++L  +     +  N R  RW   ++D++  I Y PG AN +A+ALSR   
Subjt:  IAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFG--EKCHIFTDHKSL--KYIFYQKELNLRQRRWLELIKDYDCTIEYHPGKANVVANALSR---

Query:  -KSRLPKSALCGIQVALLNELKGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNA
            +PK                     + ++S + + Q  +      ++V   + D+ L        K +E   +L+    I  + ++ +PN ++L   
Subjt:  -KSRLPKSALCGIQVALLNELKGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNA

Query:  ILEEAHSSAYAMHPG
        I+++ H     +HPG
Subjt:  ILEEAHSSAYAMHPG

Q9UR07 Transposon Tf2-11 polyprotein1.1e-1525.58Show/hide
Query:  IAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFG--EKCHIFTDHKSL--KYIFYQKELNLRQRRWLELIKDYDCTIEYHPGKANVVANALSR---
        + Y S ++ + + NY   D E+ A++ +LK WRHYL    E   I TDH++L  +     +  N R  RW   ++D++  I Y PG AN +A+ALSR   
Subjt:  IAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFG--EKCHIFTDHKSL--KYIFYQKELNLRQRRWLELIKDYDCTIEYHPGKANVVANALSR---

Query:  -KSRLPKSALCGIQVALLNELKGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNA
            +PK                     + ++S + + Q  +      ++V   + D+ L        K +E   +L+    I  + ++ +PN ++L   
Subjt:  -KSRLPKSALCGIQVALLNELKGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNA

Query:  ILEEAHSSAYAMHPG
        I+++ H     +HPG
Subjt:  ILEEAHSSAYAMHPG

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGATGGGAATGTAATAGCTTATGCTTCAAGGCAGTTGAAGGAGCATGAGTGTAATTACCCTACCCATGATCTTGAGCTAGCAGCAGTTGTTTTAGCATTAAAAAT
CTGGAGACACTATTTGTTCGGGGAAAAGTGCCATATTTTCACAGATCATAAAAGTTTGAAGTATATTTTTTATCAAAAAGAGCTAAATCTGAGACAAAGGCGATGGCTAG
AACTGATTAAAGATTATGATTGTACTATAGAGTATCATCCAGGTAAGGCCAACGTAGTAGCAAATGCATTAAGTAGGAAGTCAAGACTTCCGAAGAGTGCCTTGTGTGGT
ATTCAAGTAGCTTTGTTGAATGAGTTAAAAGGATCCAAGGCAGTAGTAACTACAGAGGATTCAGGAAGTCTCTTAGCTCAATTTCAGGTTCGGTCTTCTCTAGTAACTGA
GATTGTAAGAAGACAGTCAGAAGACAGTAATTTACAGAAGAAGTTTGAGAAATCCAAGAAAGGCTTAGAGGTGGAGTTTGAGCTGAGAACAGATGGAGCCATTGTTAAAC
AAGGAAGATTATGTGTTCCGAATATCAGTGAGCTTAAGAATGCTATTCTAGAAGAAGCTCACAGTTCAGCTTACGCTATGCATCCAGGTAGCACCAAGATGTACAGAACT
TTAAAGAAGACTTATTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAAGATGGGAATGTAATAGCTTATGCTTCAAGGCAGTTGAAGGAGCATGAGTGTAATTACCCTACCCATGATCTTGAGCTAGCAGCAGTTGTTTTAGCATTAAAAAT
CTGGAGACACTATTTGTTCGGGGAAAAGTGCCATATTTTCACAGATCATAAAAGTTTGAAGTATATTTTTTATCAAAAAGAGCTAAATCTGAGACAAAGGCGATGGCTAG
AACTGATTAAAGATTATGATTGTACTATAGAGTATCATCCAGGTAAGGCCAACGTAGTAGCAAATGCATTAAGTAGGAAGTCAAGACTTCCGAAGAGTGCCTTGTGTGGT
ATTCAAGTAGCTTTGTTGAATGAGTTAAAAGGATCCAAGGCAGTAGTAACTACAGAGGATTCAGGAAGTCTCTTAGCTCAATTTCAGGTTCGGTCTTCTCTAGTAACTGA
GATTGTAAGAAGACAGTCAGAAGACAGTAATTTACAGAAGAAGTTTGAGAAATCCAAGAAAGGCTTAGAGGTGGAGTTTGAGCTGAGAACAGATGGAGCCATTGTTAAAC
AAGGAAGATTATGTGTTCCGAATATCAGTGAGCTTAAGAATGCTATTCTAGAAGAAGCTCACAGTTCAGCTTACGCTATGCATCCAGGTAGCACCAAGATGTACAGAACT
TTAAAGAAGACTTATTGA
Protein sequenceShow/hide protein sequence
MQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFYQKELNLRQRRWLELIKDYDCTIEYHPGKANVVANALSRKSRLPKSALCG
IQVALLNELKGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRT
LKKTY