CuGenDBv2

Gene ID	Cmc08g0226921
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Genome location	CMiso1.1chr08:19486311..19487750
RNA-Seq Expression	Cmc08g0226921
Synteny	Cmc08g0226921
Gene Ontology terms	GO:0006278 - RNA-dependent DNA biosynthetic process (biological process) GO:0015074 - DNA integration (biological process) GO:0003676 - nucleic acid binding (molecular function) GO:0003964 - RNA-directed DNA polymerase activity (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR000477 - Reverse transcriptase domain IPR041373 - Reverse transcriptase, RNase H-like domain IPR041588 - Integrase zinc-binding domain IPR043128 - Reverse transcriptase/Diguanylate cyclase domain IPR043502 - DNA/RNA polymerase superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0035455.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]

2.0e-274

98.54

Show/hide

Query:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVILFIDDILVYSVERESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW
        MPFGLTNAPAVFMDLMNRIFHRYLDQFVI+FIDDILVYSV+RESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW
Subjt:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVILFIDDILVYSVERESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW

Query:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVMFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGNVIAYA
        ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNV FEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGNVIAYA
Subjt:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVMFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGNVIAYA

Query:  SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG
        SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG
Subjt:  SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG

Query:  IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNSQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELENAILEEAHSSAYAM
        IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSN QKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISEL+NAILEEAHSSAYAM
Subjt:  IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNSQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELENAILEEAHSSAYAM

Query:  HLGSTKMYRTLKKTYWWSVMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGI
        H GSTKMYRTLKKTYWWS MKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGI
Subjt:  HLGSTKMYRTLKKTYWWSVMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGI

KAA0050493.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]

2.0e-274

98.54

Show/hide

Query:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVILFIDDILVYSVERESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW
        MPFGLTNAPAVFMDLMNRIFHRYLDQFVI+FIDDILVYSV+RESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW
Subjt:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVILFIDDILVYSVERESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW

Query:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVMFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGNVIAYA
        ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNV FEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGNVIAYA
Subjt:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVMFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGNVIAYA

Query:  SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG
        SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG
Subjt:  SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG

Query:  IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNSQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELENAILEEAHSSAYAM
        IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSN QKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISEL+NAILEEAHSSAYAM
Subjt:  IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNSQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELENAILEEAHSSAYAM

Query:  HLGSTKMYRTLKKTYWWSVMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGI
        H GSTKMYRTLKKTYWWS MKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGI
Subjt:  HLGSTKMYRTLKKTYWWSVMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGI

KAA0050527.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]

2.0e-274

98.54

Show/hide

Query:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVILFIDDILVYSVERESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW
        MPFGLTNAPAVFMDLMNRIFHRYLDQFVI+FIDDILVYSV+RESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW
Subjt:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVILFIDDILVYSVERESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW

Query:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVMFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGNVIAYA
        ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNV FEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGNVIAYA
Subjt:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVMFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGNVIAYA

Query:  SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG
        SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG
Subjt:  SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG

Query:  IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNSQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELENAILEEAHSSAYAM
        IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSN QKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISEL+NAILEEAHSSAYAM
Subjt:  IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNSQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELENAILEEAHSSAYAM

Query:  HLGSTKMYRTLKKTYWWSVMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGI
        H GSTKMYRTLKKTYWWS MKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGI
Subjt:  HLGSTKMYRTLKKTYWWSVMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGI

KAA0062270.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]

2.0e-274

98.54

Show/hide

Query:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVILFIDDILVYSVERESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW
        MPFGLTNAPAVFMDLMNRIFHRYLDQFVI+FIDDILVYSV+RESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW
Subjt:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVILFIDDILVYSVERESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW

Query:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVMFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGNVIAYA
        ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNV FEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGNVIAYA
Subjt:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVMFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGNVIAYA

Query:  SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG
        SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG
Subjt:  SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG

Query:  IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNSQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELENAILEEAHSSAYAM
        IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSN QKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISEL+NAILEEAHSSAYAM
Subjt:  IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNSQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELENAILEEAHSSAYAM

Query:  HLGSTKMYRTLKKTYWWSVMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGI
        H GSTKMYRTLKKTYWWS MKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGI
Subjt:  HLGSTKMYRTLKKTYWWSVMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGI

KAA0066849.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]

2.0e-274

98.54

Show/hide

Query:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVILFIDDILVYSVERESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW
        MPFGLTNAPAVFMDLMNRIFHRYLDQFVI+FIDDILVYSV+RESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW
Subjt:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVILFIDDILVYSVERESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW

Query:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVMFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGNVIAYA
        ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNV FEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGNVIAYA
Subjt:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVMFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGNVIAYA

Query:  SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG
        SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG
Subjt:  SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG

Query:  IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNSQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELENAILEEAHSSAYAM
        IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSN QKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISEL+NAILEEAHSSAYAM
Subjt:  IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNSQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELENAILEEAHSSAYAM

Query:  HLGSTKMYRTLKKTYWWSVMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGI
        H GSTKMYRTLKKTYWWS MKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGI
Subjt:  HLGSTKMYRTLKKTYWWSVMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGI

TrEMBL top hits

e value

%identity

Alignment

A0A5A7T1Y5 Reverse transcriptase

9.7e-275

98.54

Show/hide

Query:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVILFIDDILVYSVERESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW
        MPFGLTNAPAVFMDLMNRIFHRYLDQFVI+FIDDILVYSV+RESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW
Subjt:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVILFIDDILVYSVERESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW

Query:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVMFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGNVIAYA
        ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNV FEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGNVIAYA
Subjt:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVMFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGNVIAYA

Query:  SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG
        SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG
Subjt:  SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG

Query:  IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNSQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELENAILEEAHSSAYAM
        IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSN QKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISEL+NAILEEAHSSAYAM
Subjt:  IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNSQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELENAILEEAHSSAYAM

Query:  HLGSTKMYRTLKKTYWWSVMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGI
        H GSTKMYRTLKKTYWWS MKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGI
Subjt:  HLGSTKMYRTLKKTYWWSVMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGI

A0A5A7T3K4 Reverse transcriptase

9.7e-275

98.54

Show/hide

Query:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVILFIDDILVYSVERESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW
        MPFGLTNAPAVFMDLMNRIFHRYLDQFVI+FIDDILVYSV+RESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW
Subjt:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVILFIDDILVYSVERESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW

Query:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVMFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGNVIAYA
        ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNV FEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGNVIAYA
Subjt:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVMFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGNVIAYA

Query:  SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG
        SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG
Subjt:  SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG

Query:  IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNSQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELENAILEEAHSSAYAM
        IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSN QKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISEL+NAILEEAHSSAYAM
Subjt:  IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNSQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELENAILEEAHSSAYAM

Query:  HLGSTKMYRTLKKTYWWSVMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGI
        H GSTKMYRTLKKTYWWS MKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGI
Subjt:  HLGSTKMYRTLKKTYWWSVMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGI

A0A5A7U2V7 Reverse transcriptase

9.7e-275

98.54

Show/hide

Query:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVILFIDDILVYSVERESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW
        MPFGLTNAPAVFMDLMNRIFHRYLDQFVI+FIDDILVYSV+RESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW
Subjt:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVILFIDDILVYSVERESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW

Query:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVMFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGNVIAYA
        ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNV FEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGNVIAYA
Subjt:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVMFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGNVIAYA

Query:  SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG
        SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG
Subjt:  SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG

Query:  IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNSQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELENAILEEAHSSAYAM
        IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSN QKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISEL+NAILEEAHSSAYAM
Subjt:  IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNSQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELENAILEEAHSSAYAM

Query:  HLGSTKMYRTLKKTYWWSVMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGI
        H GSTKMYRTLKKTYWWS MKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGI
Subjt:  HLGSTKMYRTLKKTYWWSVMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGI

A0A5A7UUL6 Reverse transcriptase

9.7e-275

98.54

Show/hide

Query:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVILFIDDILVYSVERESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW
        MPFGLTNAPAVFMDLMNRIFHRYLDQFVI+FIDDILVYSV+RESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW
Subjt:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVILFIDDILVYSVERESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW

Query:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVMFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGNVIAYA
        ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNV FEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGNVIAYA
Subjt:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVMFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGNVIAYA

Query:  SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG
        SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG
Subjt:  SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG

Query:  IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNSQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELENAILEEAHSSAYAM
        IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSN QKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISEL+NAILEEAHSSAYAM
Subjt:  IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNSQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELENAILEEAHSSAYAM

Query:  HLGSTKMYRTLKKTYWWSVMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGI
        H GSTKMYRTLKKTYWWS MKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGI
Subjt:  HLGSTKMYRTLKKTYWWSVMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGI

A0A5D3BHI1 Reverse transcriptase

9.7e-275

98.54

Show/hide

Query:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVILFIDDILVYSVERESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW
        MPFGLTNAPAVFMDLMNRIFHRYLDQFVI+FIDDILVYSV+RESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW
Subjt:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVILFIDDILVYSVERESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW

Query:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVMFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGNVIAYA
        ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNV FEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGNVIAYA
Subjt:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVMFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGNVIAYA

Query:  SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG
        SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG
Subjt:  SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG

Query:  IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNSQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELENAILEEAHSSAYAM
        IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSN QKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISEL+NAILEEAHSSAYAM
Subjt:  IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNSQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELENAILEEAHSSAYAM

Query:  HLGSTKMYRTLKKTYWWSVMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGI
        H GSTKMYRTLKKTYWWS MKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGI
Subjt:  HLGSTKMYRTLKKTYWWSVMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGI

SwissProt top hits

e value

%identity

Alignment

P0CT34 Transposon Tf2-1 polyprotein

3.2e-65

29.67

Show/hide

Query:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVILFIDDILVYSVERESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW
        MP+G++ APA F   +N I     +  V+ ++DDIL++S     H +H++ VLQ L+   L    +KCEF   QV F+G+ +S KG +   + ++ V+ W
Subjt:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVILFIDDILVYSVERESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW

Query:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVMFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGN-----
        ++P +  E+R FLG   Y R+FI   S+L  PL  L +K+V ++W+    Q+ + +K+ LV+ P+L      K  ++  DAS + +G VL Q  +     
Subjt:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVMFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGN-----

Query:  VIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFG--EKCHIFTDHKSL--KYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSR--
         + Y S ++ + + NY   D E+ A++ +LK WRHYL    E   I TDH++L  +   + +  N R  RW   ++D++  I Y PG AN +ADALSR  
Subjt:  VIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFG--EKCHIFTDHKSL--KYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSR--

Query:  --KSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNSQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELEN
             +PK                     + ++S + + Q  +      ++V   + D+          K +E   +L+    I  + ++ +PN ++L  
Subjt:  --KSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNSQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELEN

Query:  AILEEAHSSAYAMHLGSTKMYRTLKKTYWWSVMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGI
         I+++ H     +H G   +   + + + W  ++++I EYV  C  CQ  K    +P G L P+P  E  WE ++MDF+  LP  SSG++ +
Subjt:  AILEEAHSSAYAMHLGSTKMYRTLKKTYWWSVMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGI

P0CT35 Transposon Tf2-2 polyprotein

3.2e-65

29.67

Show/hide

Query:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVILFIDDILVYSVERESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW
        MP+G++ APA F   +N I     +  V+ ++DDIL++S     H +H++ VLQ L+   L    +KCEF   QV F+G+ +S KG +   + ++ V+ W
Subjt:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVILFIDDILVYSVERESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW

Query:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVMFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGN-----
        ++P +  E+R FLG   Y R+FI   S+L  PL  L +K+V ++W+    Q+ + +K+ LV+ P+L      K  ++  DAS + +G VL Q  +     
Subjt:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVMFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGN-----

Query:  VIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFG--EKCHIFTDHKSL--KYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSR--
         + Y S ++ + + NY   D E+ A++ +LK WRHYL    E   I TDH++L  +   + +  N R  RW   ++D++  I Y PG AN +ADALSR  
Subjt:  VIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFG--EKCHIFTDHKSL--KYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSR--

Query:  --KSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNSQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELEN
             +PK                     + ++S + + Q  +      ++V   + D+          K +E   +L+    I  + ++ +PN ++L  
Subjt:  --KSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNSQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELEN

Query:  AILEEAHSSAYAMHLGSTKMYRTLKKTYWWSVMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGI
         I+++ H     +H G   +   + + + W  ++++I EYV  C  CQ  K    +P G L P+P  E  WE ++MDF+  LP  SSG++ +
Subjt:  AILEEAHSSAYAMHLGSTKMYRTLKKTYWWSVMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGI

P0CT36 Transposon Tf2-3 polyprotein

3.2e-65

29.67

Show/hide

Query:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVILFIDDILVYSVERESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW
        MP+G++ APA F   +N I     +  V+ ++DDIL++S     H +H++ VLQ L+   L    +KCEF   QV F+G+ +S KG +   + ++ V+ W
Subjt:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVILFIDDILVYSVERESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW

Query:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVMFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGN-----
        ++P +  E+R FLG   Y R+FI   S+L  PL  L +K+V ++W+    Q+ + +K+ LV+ P+L      K  ++  DAS + +G VL Q  +     
Subjt:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVMFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGN-----

Query:  VIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFG--EKCHIFTDHKSL--KYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSR--
         + Y S ++ + + NY   D E+ A++ +LK WRHYL    E   I TDH++L  +   + +  N R  RW   ++D++  I Y PG AN +ADALSR  
Subjt:  VIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFG--EKCHIFTDHKSL--KYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSR--

Query:  --KSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNSQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELEN
             +PK                     + ++S + + Q  +      ++V   + D+          K +E   +L+    I  + ++ +PN ++L  
Subjt:  --KSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNSQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELEN

Query:  AILEEAHSSAYAMHLGSTKMYRTLKKTYWWSVMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGI
         I+++ H     +H G   +   + + + W  ++++I EYV  C  CQ  K    +P G L P+P  E  WE ++MDF+  LP  SSG++ +
Subjt:  AILEEAHSSAYAMHLGSTKMYRTLKKTYWWSVMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGI

P0CT37 Transposon Tf2-4 polyprotein

3.2e-65

29.67

Show/hide

Query:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVILFIDDILVYSVERESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW
        MP+G++ APA F   +N I     +  V+ ++DDIL++S     H +H++ VLQ L+   L    +KCEF   QV F+G+ +S KG +   + ++ V+ W
Subjt:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVILFIDDILVYSVERESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW

Query:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVMFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGN-----
        ++P +  E+R FLG   Y R+FI   S+L  PL  L +K+V ++W+    Q+ + +K+ LV+ P+L      K  ++  DAS + +G VL Q  +     
Subjt:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVMFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGN-----

Query:  VIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFG--EKCHIFTDHKSL--KYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSR--
         + Y S ++ + + NY   D E+ A++ +LK WRHYL    E   I TDH++L  +   + +  N R  RW   ++D++  I Y PG AN +ADALSR  
Subjt:  VIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFG--EKCHIFTDHKSL--KYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSR--

Query:  --KSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNSQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELEN
             +PK                     + ++S + + Q  +      ++V   + D+          K +E   +L+    I  + ++ +PN ++L  
Subjt:  --KSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNSQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELEN

Query:  AILEEAHSSAYAMHLGSTKMYRTLKKTYWWSVMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGI
         I+++ H     +H G   +   + + + W  ++++I EYV  C  CQ  K    +P G L P+P  E  WE ++MDF+  LP  SSG++ +
Subjt:  AILEEAHSSAYAMHLGSTKMYRTLKKTYWWSVMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGI

P0CT41 Transposon Tf2-12 polyprotein

3.2e-65

29.67

Show/hide

Query:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVILFIDDILVYSVERESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW
        MP+G++ APA F   +N I     +  V+ ++DDIL++S     H +H++ VLQ L+   L    +KCEF   QV F+G+ +S KG +   + ++ V+ W
Subjt:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVILFIDDILVYSVERESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW

Query:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVMFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGN-----
        ++P +  E+R FLG   Y R+FI   S+L  PL  L +K+V ++W+    Q+ + +K+ LV+ P+L      K  ++  DAS + +G VL Q  +     
Subjt:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVMFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGN-----

Query:  VIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFG--EKCHIFTDHKSL--KYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSR--
         + Y S ++ + + NY   D E+ A++ +LK WRHYL    E   I TDH++L  +   + +  N R  RW   ++D++  I Y PG AN +ADALSR  
Subjt:  VIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFG--EKCHIFTDHKSL--KYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSR--

Query:  --KSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNSQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELEN
             +PK                     + ++S + + Q  +      ++V   + D+          K +E   +L+    I  + ++ +PN ++L  
Subjt:  --KSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNSQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELEN

Query:  AILEEAHSSAYAMHLGSTKMYRTLKKTYWWSVMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGI
         I+++ H     +H G   +   + + + W  ++++I EYV  C  CQ  K    +P G L P+P  E  WE ++MDF+  LP  SSG++ +
Subjt:  AILEEAHSSAYAMHLGSTKMYRTLKKTYWWSVMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGI

Arabidopsis top hits

e value

%identity

Alignment

ATMG00860.1 DNA/RNA polymerases superfamily protein

7.9e-27

45.16

Show/hide

Query:  HLRIVLQTLREKQLYAKFSKCEFWLEQVVFLG--HVVSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVMFEW
        HL +VLQ   + Q YA   KC F   Q+ +LG  H++S +GVS DP K+EA+V W  P + TE+R FLGL GYYRRF++++ ++  PLT L +KN + +W
Subjt:  HLRIVLQTLREKQLYAKFSKCEFWLEQVVFLG--HVVSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVMFEW

Query:  SDKCEQSFQELKKRLVTAPILALP
        ++    +F+ LK  + T P+LALP
Subjt:  SDKCEQSFQELKKRLVTAPILALP

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCCATTCGGTTTAACGAATGCGCCAGCGGTTTTCATGGATCTCATGAACAGGATCTTCCATCGGTATTTAGATCAGTTTGTGATTTTGTTCATTGATGATATATTAGT
TTACTCAGTTGAAAGAGAATCTCATGAGGAACATCTGAGGATTGTTCTACAGACTCTACGTGAAAAACAGTTATACGCTAAGTTCAGCAAATGTGAGTTCTGGTTGGAAC
AGGTAGTATTTTTGGGGCATGTAGTTTCAGCAAAAGGAGTTAGTGTCGATCCACAAAAAGTAGAAGCGGTTGTCAATTGGGAAAGACCAATTAGTGCGACAGAAGTACGT
AGTTTCCTGGGTTTGGCAGGATACTATAGGCGTTTTATTGAGGATTTCTCTCGATTGGCATTGCCTTTGACCGCTTTGACAAGGAAGAATGTTATGTTTGAGTGGTCAGA
TAAATGCGAGCAAAGTTTTCAGGAATTGAAGAAAAGACTAGTTACAGCACCTATTTTGGCACTTCCTGTAACAGGGAAGGACTATGTGATTTATTGTGATGCTTCAAGGC
TAGGATTAGGTTGTGTGCTTATGCAAGATGGGAATGTAATAGCTTATGCTTCAAGGCAGTTGAAGGAGCATGAGTGTAATTACCCTACCCATGATCTTGAGCTAGCAGCA
GTTGTTTTAGCACTAAAAATCTGGAGACACTATTTGTTCGGGGAAAAGTGCCATATTTTCACAGATCATAAAAGTCTGAAGTATATTTTTGATCAAAAAGAGCTAAATCT
GAGACAAAGGCGATGGCTAGAACTGATTAAAGATTATGATTGTACTATAGAGTATCATCCAGGTAAGGCCAACGTAGTAGCAGATGCATTAAGTAGGAAGTCAAGACTTC
CGAAGAGTGCCTTGTGTGGTATTCGAGTAGCTTTGTTGAATGAGTTAAGAGGTTCCAAGGCAGTAGTAACTACAGAGGATTCAGGAAGTCTCTTAGCTCAATTTCAGGTT
CGGTCTTCTCTAGTAACTGAGATTGTAAGAAGACAGTCAGAAGACAGTAATTCACAGAAGAAGTTTGAGAAATCCAAGAAAGGCTTAGAGGTGGAGTTTGAGCTGAGAAC
AGATGGAGCCATTGTTAAACAAGGAAGATTATGTGTTCCGAATATCAGTGAGCTTGAGAATGCTATTCTAGAAGAAGCTCACAGTTCAGCTTACGCTATGCATCTAGGTA
GCACCAAGATGTACAGAACTTTAAAGAAGACTTATTGGTGGTCTGTAATGAAGCAAGAGATAGCTGAATATGTTGATAGATGTTTGATTTGTCAACAGGTTAAACCAGTA
AGACAGAGGCCAGGAGGATTTCTTAATCCTTTGCCAGTGCCAGAGTGGAAATGGGAGCATATTACTATGGATTTTCTATTTGGATTACCTCGTACATCCAGTGGACATGA
TGGTATATAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MPFGLTNAPAVFMDLMNRIFHRYLDQFVILFIDDILVYSVERESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPISATEVR
SFLGLAGYYRRFIEDFSRLALPLTALTRKNVMFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGNVIAYASRQLKEHECNYPTHDLELAA
VVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQV
RSSLVTEIVRRQSEDSNSQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELENAILEEAHSSAYAMHLGSTKMYRTLKKTYWWSVMKQEIAEYVDRCLICQQVKPV
RQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGI

Cmc08g0226921 (gene) of Melon (Charmono) v1.1 genome