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Cmc08g0226931 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc08g0226931
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase domain-containing protein
Genome locationCMiso1.1chr08:19490581..19492046
RNA-Seq ExpressionCmc08g0226931
SyntenyCmc08g0226931
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032946.1 uncharacterized protein E6C27_scaffold269G00200 [Cucumis melo var. makuwa]1.6e-0790.32Show/hide
Query:  KTGQLVFTRNQEVSGFSCISECIGGLRISIW
        KTGQLVFTRNQEVSGF+CISECI G+RISIW
Subjt:  KTGQLVFTRNQEVSGFSCISECIGGLRISIW

KAA0035073.1 uncharacterized protein E6C27_scaffold57G001380 [Cucumis melo var. makuwa]1.1e-0696.43Show/hide
Query:  QLVFTRNQEVSGFSCISECIGGLRISIW
        QLVFTRNQEVSGFSCISECIGG+RISIW
Subjt:  QLVFTRNQEVSGFSCISECIGGLRISIW

KAA0042134.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]5.1e-0988.57Show/hide
Query:  MKKTGQLVFTRNQEVSGFSCISECIGGLRISIWPR
        MKKTGQLVFTRNQEVSG SCISECIGG+RISIW +
Subjt:  MKKTGQLVFTRNQEVSGFSCISECIGGLRISIWPR

KAA0043123.1 transposase [Cucumis melo var. makuwa]1.2e-0784.85Show/hide
Query:  MKKTGQLVFTRNQEVSGFSCISECIGGLRISIW
        ++  GQLVFTRNQEVSGFSCISECIGG+RISIW
Subjt:  MKKTGQLVFTRNQEVSGFSCISECIGGLRISIW

KAA0056684.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.0e-0996.97Show/hide
Query:  MKKTGQLVFTRNQEVSGFSCISECIGGLRISIW
        MKKTGQLVFTRNQEVSGFSCISECIGG+RISIW
Subjt:  MKKTGQLVFTRNQEVSGFSCISECIGGLRISIW

TrEMBL top hitse value%identityAlignment
A0A5A7SSI1 Reverse transcriptase domain-containing protein7.9e-0890.32Show/hide
Query:  KTGQLVFTRNQEVSGFSCISECIGGLRISIW
        KTGQLVFTRNQEVSGF+CISECI G+RISIW
Subjt:  KTGQLVFTRNQEVSGFSCISECIGGLRISIW

A0A5A7SX02 CCHC-type domain-containing protein5.1e-0796.43Show/hide
Query:  QLVFTRNQEVSGFSCISECIGGLRISIW
        QLVFTRNQEVSGFSCISECIGG+RISIW
Subjt:  QLVFTRNQEVSGFSCISECIGGLRISIW

A0A5A7TFC5 Reverse transcriptase2.5e-0988.57Show/hide
Query:  MKKTGQLVFTRNQEVSGFSCISECIGGLRISIWPR
        MKKTGQLVFTRNQEVSG SCISECIGG+RISIW +
Subjt:  MKKTGQLVFTRNQEVSGFSCISECIGGLRISIWPR

A0A5A7TIE3 Transposase6.0e-0884.85Show/hide
Query:  MKKTGQLVFTRNQEVSGFSCISECIGGLRISIW
        ++  GQLVFTRNQEVSGFSCISECIGG+RISIW
Subjt:  MKKTGQLVFTRNQEVSGFSCISECIGGLRISIW

A0A5A7UNA3 Reverse transcriptase4.9e-1096.97Show/hide
Query:  MKKTGQLVFTRNQEVSGFSCISECIGGLRISIW
        MKKTGQLVFTRNQEVSGFSCISECIGG+RISIW
Subjt:  MKKTGQLVFTRNQEVSGFSCISECIGGLRISIW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAAACAGGGCAGTTGGTTTTCACTCGAAATCAGGAGGTCTCTGGTTTTTCTTGTATTTCAGAGTGTATCGGTGGACTTAGAATTTCTATTTGGCCGAGA
AGAATTAAACCGAGCTTATAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAAACAGGGCAGTTGGTTTTCACTCGAAATCAGGAGGTCTCTGGTTTTTCTTGTATTTCAGAGTGTATCGGTGGACTTAGAATTTCTATTTGGCCGAGA
AGAATTAAACCGAGCTTATAGACCAAGGATCTAGCCCAAGACTGTAGAGATCGACTTCCCGGTGCCTGATAGACTGCCTTAGTCTGCGGAAGCTTCATTATCGAT
TGCCAGTACGTGTTTTGAGTTG
Protein sequenceShow/hide protein sequence
MKKTGQLVFTRNQEVSGFSCISECIGGLRISIWPRRIKPSL