| GenBank top hits | e value | %identity | Alignment |
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| KAA0033514.1 pol protein [Cucumis melo var. makuwa] | 1.3e-66 | 74.71 | Show/hide |
Query: MDPSKIEAITKWSQHSIVSEVRSFLGLTGYYRRFVEDFSHIAIPLTQLTKKGSLFVWSKSCDESFQNLKQKLFLPPVLIRLDGLGSSLIYSDTCRKHLGC
+DP+KIEA+T W++ SIVSEVRSFLGL GYYRRFVE+FSHIA PLTQLT+KG+ FVWSK+C++SFQNLKQKL PVL DG GS +IYSD +K LGC
Subjt: MDPSKIEAITKWSQHSIVSEVRSFLGLTGYYRRFVEDFSHIAIPLTQLTKKGSLFVWSKSCDESFQNLKQKLFLPPVLIRLDGLGSSLIYSDTCRKHLGC
Query: VLMQQGKGVAYVSRQLKSHEQNYPTHDLELVVVVFAPRIWRYYLYGEKIQICRHHNSLTYFFTPKELNTR
VLMQQGK VAY SRQLKSHEQNYPTHDLEL VVFA +IWR+YLYGEKIQI H SL YFFT KELN R
Subjt: VLMQQGKGVAYVSRQLKSHEQNYPTHDLELVVVVFAPRIWRYYLYGEKIQICRHHNSLTYFFTPKELNTR
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| KAA0035816.1 pol protein [Cucumis melo var. makuwa] | 1.7e-66 | 74.12 | Show/hide |
Query: MDPSKIEAITKWSQHSIVSEVRSFLGLTGYYRRFVEDFSHIAIPLTQLTKKGSLFVWSKSCDESFQNLKQKLFLPPVLIRLDGLGSSLIYSDTCRKHLGC
+DP+KIEA+T W++ S VSEVRSFLGLTGYYRRFVE+FS IA PLTQLT+KG+ FVWSK+C++SFQNLKQKL PVL DG GS +IYSD +K LGC
Subjt: MDPSKIEAITKWSQHSIVSEVRSFLGLTGYYRRFVEDFSHIAIPLTQLTKKGSLFVWSKSCDESFQNLKQKLFLPPVLIRLDGLGSSLIYSDTCRKHLGC
Query: VLMQQGKGVAYVSRQLKSHEQNYPTHDLELVVVVFAPRIWRYYLYGEKIQICRHHNSLTYFFTPKELNTR
VLMQQGK VAY SRQLKSHEQNYPTHDLEL VVFA +IWR+YLYGEKIQ+ H SL YFFTPKELN R
Subjt: VLMQQGKGVAYVSRQLKSHEQNYPTHDLELVVVVFAPRIWRYYLYGEKIQICRHHNSLTYFFTPKELNTR
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| KAA0041129.1 pol protein [Cucumis melo var. makuwa] | 1.3e-79 | 99.32 | Show/hide |
Query: MDPSKIEAITKWSQHSIVSEVRSFLGLTGYYRRFVEDFSHIAIPLTQLTKKGSLFVWSKSCDESFQNLKQKLFLPPVLIRLDGLGSSLIYSDTCRKHLGC
MDPSKIEAITKWSQHSIVSEVRSFLGLTGYYRRFVEDFSHIAIPLTQLTKKGSLFVWSKSCDESFQNLKQKLFLPPVLIRLDGLGSSLIYSDTCRKHLGC
Subjt: MDPSKIEAITKWSQHSIVSEVRSFLGLTGYYRRFVEDFSHIAIPLTQLTKKGSLFVWSKSCDESFQNLKQKLFLPPVLIRLDGLGSSLIYSDTCRKHLGC
Query: VLMQQGKGVAYVSRQLKSHEQNYPTHDLELVVVVFAPRIWRYYLYGE
VLMQQGKGVAYVSRQLKSHEQNYPTHDLELVVVVFAPRIWRYYLYG+
Subjt: VLMQQGKGVAYVSRQLKSHEQNYPTHDLELVVVVFAPRIWRYYLYGE
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| KAA0046185.1 pol protein [Cucumis melo var. makuwa] | 6.4e-66 | 74.12 | Show/hide |
Query: MDPSKIEAITKWSQHSIVSEVRSFLGLTGYYRRFVEDFSHIAIPLTQLTKKGSLFVWSKSCDESFQNLKQKLFLPPVLIRLDGLGSSLIYSDTCRKHLGC
+DP+KIEA+T W++ S VSEVRSFLGL GYYRRFVE+FS IA PLTQLT+KG+ FVWSK+C++SFQNLKQKL PVL LDG GS +IYSD +K LGC
Subjt: MDPSKIEAITKWSQHSIVSEVRSFLGLTGYYRRFVEDFSHIAIPLTQLTKKGSLFVWSKSCDESFQNLKQKLFLPPVLIRLDGLGSSLIYSDTCRKHLGC
Query: VLMQQGKGVAYVSRQLKSHEQNYPTHDLELVVVVFAPRIWRYYLYGEKIQICRHHNSLTYFFTPKELNTR
VLMQQGK VAY SRQLKSHEQNYPTHDLEL VVFA +IWR+YLYGEKIQI H SL YFFT KELN R
Subjt: VLMQQGKGVAYVSRQLKSHEQNYPTHDLELVVVVFAPRIWRYYLYGEKIQICRHHNSLTYFFTPKELNTR
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| KAA0056806.1 pol protein [Cucumis melo var. makuwa] | 3.4e-67 | 75.29 | Show/hide |
Query: MDPSKIEAITKWSQHSIVSEVRSFLGLTGYYRRFVEDFSHIAIPLTQLTKKGSLFVWSKSCDESFQNLKQKLFLPPVLIRLDGLGSSLIYSDTCRKHLGC
+DP+KIEA+T W++ S VSEVRSFLGL GYYRRFVE+FS IAIPLTQLT+KG+LFVWSK+C++SFQNLKQKL PVL DG GS +IYSD +K LGC
Subjt: MDPSKIEAITKWSQHSIVSEVRSFLGLTGYYRRFVEDFSHIAIPLTQLTKKGSLFVWSKSCDESFQNLKQKLFLPPVLIRLDGLGSSLIYSDTCRKHLGC
Query: VLMQQGKGVAYVSRQLKSHEQNYPTHDLELVVVVFAPRIWRYYLYGEKIQICRHHNSLTYFFTPKELNTR
VLMQQGK VAY SRQLKSHEQNYPTHDLEL VVFA +IWR+YLYGEKIQI HNSL YFFT KELN R
Subjt: VLMQQGKGVAYVSRQLKSHEQNYPTHDLELVVVVFAPRIWRYYLYGEKIQICRHHNSLTYFFTPKELNTR
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SQQ3 Pol protein | 6.3e-67 | 74.71 | Show/hide |
Query: MDPSKIEAITKWSQHSIVSEVRSFLGLTGYYRRFVEDFSHIAIPLTQLTKKGSLFVWSKSCDESFQNLKQKLFLPPVLIRLDGLGSSLIYSDTCRKHLGC
+DP+KIEA+T W++ SIVSEVRSFLGL GYYRRFVE+FSHIA PLTQLT+KG+ FVWSK+C++SFQNLKQKL PVL DG GS +IYSD +K LGC
Subjt: MDPSKIEAITKWSQHSIVSEVRSFLGLTGYYRRFVEDFSHIAIPLTQLTKKGSLFVWSKSCDESFQNLKQKLFLPPVLIRLDGLGSSLIYSDTCRKHLGC
Query: VLMQQGKGVAYVSRQLKSHEQNYPTHDLELVVVVFAPRIWRYYLYGEKIQICRHHNSLTYFFTPKELNTR
VLMQQGK VAY SRQLKSHEQNYPTHDLEL VVFA +IWR+YLYGEKIQI H SL YFFT KELN R
Subjt: VLMQQGKGVAYVSRQLKSHEQNYPTHDLELVVVVFAPRIWRYYLYGEKIQICRHHNSLTYFFTPKELNTR
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| A0A5A7T0S7 Reverse transcriptase | 8.2e-67 | 74.12 | Show/hide |
Query: MDPSKIEAITKWSQHSIVSEVRSFLGLTGYYRRFVEDFSHIAIPLTQLTKKGSLFVWSKSCDESFQNLKQKLFLPPVLIRLDGLGSSLIYSDTCRKHLGC
+DP+KIEA+T W++ S VSEVRSFLGLTGYYRRFVE+FS IA PLTQLT+KG+ FVWSK+C++SFQNLKQKL PVL DG GS +IYSD +K LGC
Subjt: MDPSKIEAITKWSQHSIVSEVRSFLGLTGYYRRFVEDFSHIAIPLTQLTKKGSLFVWSKSCDESFQNLKQKLFLPPVLIRLDGLGSSLIYSDTCRKHLGC
Query: VLMQQGKGVAYVSRQLKSHEQNYPTHDLELVVVVFAPRIWRYYLYGEKIQICRHHNSLTYFFTPKELNTR
VLMQQGK VAY SRQLKSHEQNYPTHDLEL VVFA +IWR+YLYGEKIQ+ H SL YFFTPKELN R
Subjt: VLMQQGKGVAYVSRQLKSHEQNYPTHDLELVVVVFAPRIWRYYLYGEKIQICRHHNSLTYFFTPKELNTR
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| A0A5A7TII0 Pol protein | 6.5e-80 | 99.32 | Show/hide |
Query: MDPSKIEAITKWSQHSIVSEVRSFLGLTGYYRRFVEDFSHIAIPLTQLTKKGSLFVWSKSCDESFQNLKQKLFLPPVLIRLDGLGSSLIYSDTCRKHLGC
MDPSKIEAITKWSQHSIVSEVRSFLGLTGYYRRFVEDFSHIAIPLTQLTKKGSLFVWSKSCDESFQNLKQKLFLPPVLIRLDGLGSSLIYSDTCRKHLGC
Subjt: MDPSKIEAITKWSQHSIVSEVRSFLGLTGYYRRFVEDFSHIAIPLTQLTKKGSLFVWSKSCDESFQNLKQKLFLPPVLIRLDGLGSSLIYSDTCRKHLGC
Query: VLMQQGKGVAYVSRQLKSHEQNYPTHDLELVVVVFAPRIWRYYLYGE
VLMQQGKGVAYVSRQLKSHEQNYPTHDLELVVVVFAPRIWRYYLYG+
Subjt: VLMQQGKGVAYVSRQLKSHEQNYPTHDLELVVVVFAPRIWRYYLYGE
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| A0A5A7TXM6 Reverse transcriptase | 3.1e-66 | 74.12 | Show/hide |
Query: MDPSKIEAITKWSQHSIVSEVRSFLGLTGYYRRFVEDFSHIAIPLTQLTKKGSLFVWSKSCDESFQNLKQKLFLPPVLIRLDGLGSSLIYSDTCRKHLGC
+DP+KIEA+T W++ S VSEVRSFLGL GYYRRFVE+FS IA PLTQLT+KG+ FVWSK+C++SFQNLKQKL PVL LDG GS +IYSD +K LGC
Subjt: MDPSKIEAITKWSQHSIVSEVRSFLGLTGYYRRFVEDFSHIAIPLTQLTKKGSLFVWSKSCDESFQNLKQKLFLPPVLIRLDGLGSSLIYSDTCRKHLGC
Query: VLMQQGKGVAYVSRQLKSHEQNYPTHDLELVVVVFAPRIWRYYLYGEKIQICRHHNSLTYFFTPKELNTR
VLMQQGK VAY SRQLKSHEQNYPTHDLEL VVFA +IWR+YLYGEKIQI H SL YFFT KELN R
Subjt: VLMQQGKGVAYVSRQLKSHEQNYPTHDLELVVVVFAPRIWRYYLYGEKIQICRHHNSLTYFFTPKELNTR
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| A0A5A7UR62 Reverse transcriptase | 1.6e-67 | 75.29 | Show/hide |
Query: MDPSKIEAITKWSQHSIVSEVRSFLGLTGYYRRFVEDFSHIAIPLTQLTKKGSLFVWSKSCDESFQNLKQKLFLPPVLIRLDGLGSSLIYSDTCRKHLGC
+DP+KIEA+T W++ S VSEVRSFLGL GYYRRFVE+FS IAIPLTQLT+KG+LFVWSK+C++SFQNLKQKL PVL DG GS +IYSD +K LGC
Subjt: MDPSKIEAITKWSQHSIVSEVRSFLGLTGYYRRFVEDFSHIAIPLTQLTKKGSLFVWSKSCDESFQNLKQKLFLPPVLIRLDGLGSSLIYSDTCRKHLGC
Query: VLMQQGKGVAYVSRQLKSHEQNYPTHDLELVVVVFAPRIWRYYLYGEKIQICRHHNSLTYFFTPKELNTR
VLMQQGK VAY SRQLKSHEQNYPTHDLEL VVFA +IWR+YLYGEKIQI HNSL YFFT KELN R
Subjt: VLMQQGKGVAYVSRQLKSHEQNYPTHDLELVVVVFAPRIWRYYLYGEKIQICRHHNSLTYFFTPKELNTR
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04323 Retrovirus-related Pol polyprotein from transposon 17.6 | 1.2e-25 | 35.88 | Show/hide |
Query: DPSKIEAITKWSQHSIVSEVRSFLGLTGYYRRFVEDFSHIAIPLTQLTKKG-SLFVWSKSCDESFQNLKQKLFLPPVLIRLDGLGSSLIYSDTCRKHLGC
+P KIEAI K+ + E+++FLGLTGYYR+F+ +F+ IA P+T+ KK + + D +F+ LK + P+L D + +D LG
Subjt: DPSKIEAITKWSQHSIVSEVRSFLGLTGYYRRFVEDFSHIAIPLTQLTKKG-SLFVWSKSCDESFQNLKQKLFLPPVLIRLDGLGSSLIYSDTCRKHLGC
Query: VLMQQGKGVAYVSRQLKSHEQNYPTHDLELVVVVFAPRIWRYYLYGEKIQICRHHNSLTYFFTPKELNTR
VL Q G ++Y+SR L HE NY T + EL+ +V+A + +R+YL G +I H L++ + K+ N++
Subjt: VLMQQGKGVAYVSRQLKSHEQNYPTHDLELVVVVFAPRIWRYYLYGEKIQICRHHNSLTYFFTPKELNTR
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| P10401 Retrovirus-related Pol polyprotein from transposon gypsy | 2.5e-20 | 32.42 | Show/hide |
Query: DPSKIEAITKWSQHSIVSEVRSFLGLTGYYRRFVEDFSHIAIPLTQLTK--KGSL---------FVWSKSCDESFQNLKQKLFLPPVLIRLDGLGSSL-I
DP K++AI ++ + V +VRSFLGL YYR F++DF+ IA P+T + K GS+ ++++ +FQ L+ L V+++ +
Subjt: DPSKIEAITKWSQHSIVSEVRSFLGLTGYYRRFVEDFSHIAIPLTQLTK--KGSL---------FVWSKSCDESFQNLKQKLFLPPVLIRLDGLGSSL-I
Query: YSDTCRKHLGCVLMQQGKGVAYVSRQLKSHEQNYPTHDLELVVVVFAPRIWRYYLYGEK-IQICRHHNSLTYFFTPKELNTR
+D +G VL Q+G+ + +SR LK EQNY T++ EL+ +V+A + +LYG + I I H LT+ + N +
Subjt: YSDTCRKHLGCVLMQQGKGVAYVSRQLKSHEQNYPTHDLELVVVVFAPRIWRYYLYGEK-IQICRHHNSLTYFFTPKELNTR
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| P20825 Retrovirus-related Pol polyprotein from transposon 297 | 1.2e-22 | 34.34 | Show/hide |
Query: DPSKIEAITKWSQHSIVSEVRSFLGLTGYYRRFVEDFSHIAIPLTQLTKKGSLFVWSK-SCDESFQNLKQKLFLPPVLIRLDGLGSSLIYSDTCRKHLGC
+P K++AI + + E+R+FLGLTGYYR+F+ +++ IA P+T KK + K E+F+ LK + P+L D ++ +D LG
Subjt: DPSKIEAITKWSQHSIVSEVRSFLGLTGYYRRFVEDFSHIAIPLTQLTKKGSLFVWSK-SCDESFQNLKQKLFLPPVLIRLDGLGSSLIYSDTCRKHLGC
Query: VLMQQGKGVAYVSRQLKSHEQNYPTHDLELVVVVFAPRIWRYYLYGEKIQICRHHNSLTYFFTPKE
VL Q G ++++SR L HE NY + EL+ +V+A + +R+YL G + I H L + KE
Subjt: VLMQQGKGVAYVSRQLKSHEQNYPTHDLELVVVVFAPRIWRYYLYGEKIQICRHHNSLTYFFTPKE
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| Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein | 2.7e-14 | 30 | Show/hide |
Query: KIEAITKWSQHSIVSEVRSFLGLTGYYRRFVEDFSHIAIPLTQLTKKGSLFVWSKSCDESFQNLKQKLFLPPVLIRLDGLGSSLIYSDTCRKHLGCVLMQ
K AI + V + + FLG+ YYRRF+ + S IA P+ S W++ D++ + LK L PVL+ + + + +D + +G VL +
Subjt: KIEAITKWSQHSIVSEVRSFLGLTGYYRRFVEDFSHIAIPLTQLTKKGSLFVWSKSCDESFQNLKQKLFLPPVLIRLDGLGSSLIYSDTCRKHLGCVLMQ
Query: QGKG------VAYVSRQLKSHEQNYPTHDLELVVVVFAPRIWRYYLYGEKIQICRHHNSL
V Y S+ L+S ++NYP +LEL+ ++ A +RY L+G+ + H SL
Subjt: QGKG------VAYVSRQLKSHEQNYPTHDLELVVVVFAPRIWRYYLYGEKIQICRHHNSL
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| Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus | 1.5e-17 | 30.48 | Show/hide |
Query: DPSKIEAITKWSQHSIVSEVRSFLGLTGYYRRFVEDFSHIAIPLTQLTKKGSLFVWSKSCD-------------ESFQNLKQKLFLPPVLIRLDGLGSSL
DP K+ AI++ + V E++ FLG+T YYR+F++D++ +A PLT LT+ L+ KS +SF +LK L +L
Subjt: DPSKIEAITKWSQHSIVSEVRSFLGLTGYYRRFVEDFSHIAIPLTQLTKKGSLFVWSKSCD-------------ESFQNLKQKLFLPPVLIRLDGLGSSL
Query: IYSDTCRKHLGCVLMQQGKG----VAYVSRQLKSHEQNYPTHDLELVVVVFAPRIWRYYLYGE-KIQICRHHNSLTYFFTPKELNTR
+ +D +G VL Q +G +AY+SR L E+NY T + E++ ++++ R YLYG I++ H LT+ + N +
Subjt: IYSDTCRKHLGCVLMQQGKG----VAYVSRQLKSHEQNYPTHDLELVVVVFAPRIWRYYLYGE-KIQICRHHNSLTYFFTPKELNTR
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