; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc08g0227241 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc08g0227241
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRetrovirus-related Pol polyprotein from transposon RE1
Genome locationCMiso1.1chr08:20151824..20152525
RNA-Seq ExpressionCmc08g0227241
SyntenyCmc08g0227241
Gene Ontology termsGO:0009987 - cellular process (biological process)
GO:0005488 - binding (molecular function)
InterPro domainsIPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_031744753.1 uncharacterized protein LOC101212255 isoform X1 [Cucumis sativus]5.5e-7672.46Show/hide
Query:  QMYGMDYFDTFSHVAKLISIRLFLSMAATHNWPLHQLDIKNVLLHSDLPEDVYMEQPPGFVAQGESGKVCCLPQSLCELKQSPHGWFGKLNQALEYFSMK
        Q+YG DY DTFS VAKL SIRLFLSMAAT+ W LHQLDIKN  LH DL E+VYMEQPPGFVAQGES KVC L +SL  LKQSP  WFGK +QAL  F MK
Subjt:  QMYGMDYFDTFSHVAKLISIRLFLSMAATHNWPLHQLDIKNVLLHSDLPEDVYMEQPPGFVAQGESGKVCCLPQSLCELKQSPHGWFGKLNQALEYFSMK

Query:  KSTYDNFVFYRRSDNGITLFVVYVDDVVITGNDVLGISPLKTFLQGLFHTTNLERLKYFLGIEVMTSKKGIYPSQWKYAFDLLFEIGKLGIKPCSTSMIP
        KST D+ VFYRRS+ GI L VVYVDD+VITGND LGIS LKTFLQG F+T +L +LKYFLGIEVM SKKGIY SQ KY  DLL E GKLG KP  T M+P
Subjt:  KSTYDNFVFYRRSDNGITLFVVYVDDVVITGNDVLGISPLKTFLQGLFHTTNLERLKYFLGIEVMTSKKGIYPSQWKYAFDLLFEIGKLGIKPCSTSMIP

Query:  NFRLAKE
        N +L KE
Subjt:  NFRLAKE

XP_031744754.1 uncharacterized protein LOC101212255 isoform X2 [Cucumis sativus]5.5e-7672.46Show/hide
Query:  QMYGMDYFDTFSHVAKLISIRLFLSMAATHNWPLHQLDIKNVLLHSDLPEDVYMEQPPGFVAQGESGKVCCLPQSLCELKQSPHGWFGKLNQALEYFSMK
        Q+YG DY DTFS VAKL SIRLFLSMAAT+ W LHQLDIKN  LH DL E+VYMEQPPGFVAQGES KVC L +SL  LKQSP  WFGK +QAL  F MK
Subjt:  QMYGMDYFDTFSHVAKLISIRLFLSMAATHNWPLHQLDIKNVLLHSDLPEDVYMEQPPGFVAQGESGKVCCLPQSLCELKQSPHGWFGKLNQALEYFSMK

Query:  KSTYDNFVFYRRSDNGITLFVVYVDDVVITGNDVLGISPLKTFLQGLFHTTNLERLKYFLGIEVMTSKKGIYPSQWKYAFDLLFEIGKLGIKPCSTSMIP
        KST D+ VFYRRS+ GI L VVYVDD+VITGND LGIS LKTFLQG F+T +L +LKYFLGIEVM SKKGIY SQ KY  DLL E GKLG KP  T M+P
Subjt:  KSTYDNFVFYRRSDNGITLFVVYVDDVVITGNDVLGISPLKTFLQGLFHTTNLERLKYFLGIEVMTSKKGIYPSQWKYAFDLLFEIGKLGIKPCSTSMIP

Query:  NFRLAKE
        N +L KE
Subjt:  NFRLAKE

XP_031744755.1 uncharacterized protein LOC101212255 isoform X3 [Cucumis sativus]5.5e-7672.46Show/hide
Query:  QMYGMDYFDTFSHVAKLISIRLFLSMAATHNWPLHQLDIKNVLLHSDLPEDVYMEQPPGFVAQGESGKVCCLPQSLCELKQSPHGWFGKLNQALEYFSMK
        Q+YG DY DTFS VAKL SIRLFLSMAAT+ W LHQLDIKN  LH DL E+VYMEQPPGFVAQGES KVC L +SL  LKQSP  WFGK +QAL  F MK
Subjt:  QMYGMDYFDTFSHVAKLISIRLFLSMAATHNWPLHQLDIKNVLLHSDLPEDVYMEQPPGFVAQGESGKVCCLPQSLCELKQSPHGWFGKLNQALEYFSMK

Query:  KSTYDNFVFYRRSDNGITLFVVYVDDVVITGNDVLGISPLKTFLQGLFHTTNLERLKYFLGIEVMTSKKGIYPSQWKYAFDLLFEIGKLGIKPCSTSMIP
        KST D+ VFYRRS+ GI L VVYVDD+VITGND LGIS LKTFLQG F+T +L +LKYFLGIEVM SKKGIY SQ KY  DLL E GKLG KP  T M+P
Subjt:  KSTYDNFVFYRRSDNGITLFVVYVDDVVITGNDVLGISPLKTFLQGLFHTTNLERLKYFLGIEVMTSKKGIYPSQWKYAFDLLFEIGKLGIKPCSTSMIP

Query:  NFRLAKE
        N +L KE
Subjt:  NFRLAKE

XP_031744756.1 uncharacterized protein LOC101212255 isoform X4 [Cucumis sativus]5.5e-7672.46Show/hide
Query:  QMYGMDYFDTFSHVAKLISIRLFLSMAATHNWPLHQLDIKNVLLHSDLPEDVYMEQPPGFVAQGESGKVCCLPQSLCELKQSPHGWFGKLNQALEYFSMK
        Q+YG DY DTFS VAKL SIRLFLSMAAT+ W LHQLDIKN  LH DL E+VYMEQPPGFVAQGES KVC L +SL  LKQSP  WFGK +QAL  F MK
Subjt:  QMYGMDYFDTFSHVAKLISIRLFLSMAATHNWPLHQLDIKNVLLHSDLPEDVYMEQPPGFVAQGESGKVCCLPQSLCELKQSPHGWFGKLNQALEYFSMK

Query:  KSTYDNFVFYRRSDNGITLFVVYVDDVVITGNDVLGISPLKTFLQGLFHTTNLERLKYFLGIEVMTSKKGIYPSQWKYAFDLLFEIGKLGIKPCSTSMIP
        KST D+ VFYRRS+ GI L VVYVDD+VITGND LGIS LKTFLQG F+T +L +LKYFLGIEVM SKKGIY SQ KY  DLL E GKLG KP  T M+P
Subjt:  KSTYDNFVFYRRSDNGITLFVVYVDDVVITGNDVLGISPLKTFLQGLFHTTNLERLKYFLGIEVMTSKKGIYPSQWKYAFDLLFEIGKLGIKPCSTSMIP

Query:  NFRLAKE
        N +L KE
Subjt:  NFRLAKE

XP_031744758.1 uncharacterized protein LOC101212255 isoform X5 [Cucumis sativus]5.5e-7672.46Show/hide
Query:  QMYGMDYFDTFSHVAKLISIRLFLSMAATHNWPLHQLDIKNVLLHSDLPEDVYMEQPPGFVAQGESGKVCCLPQSLCELKQSPHGWFGKLNQALEYFSMK
        Q+YG DY DTFS VAKL SIRLFLSMAAT+ W LHQLDIKN  LH DL E+VYMEQPPGFVAQGES KVC L +SL  LKQSP  WFGK +QAL  F MK
Subjt:  QMYGMDYFDTFSHVAKLISIRLFLSMAATHNWPLHQLDIKNVLLHSDLPEDVYMEQPPGFVAQGESGKVCCLPQSLCELKQSPHGWFGKLNQALEYFSMK

Query:  KSTYDNFVFYRRSDNGITLFVVYVDDVVITGNDVLGISPLKTFLQGLFHTTNLERLKYFLGIEVMTSKKGIYPSQWKYAFDLLFEIGKLGIKPCSTSMIP
        KST D+ VFYRRS+ GI L VVYVDD+VITGND LGIS LKTFLQG F+T +L +LKYFLGIEVM SKKGIY SQ KY  DLL E GKLG KP  T M+P
Subjt:  KSTYDNFVFYRRSDNGITLFVVYVDDVVITGNDVLGISPLKTFLQGLFHTTNLERLKYFLGIEVMTSKKGIYPSQWKYAFDLLFEIGKLGIKPCSTSMIP

Query:  NFRLAKE
        N +L KE
Subjt:  NFRLAKE

TrEMBL top hitse value%identityAlignment
A0A438G5Y3 Retrovirus-related Pol polyprotein from transposon TNT 1-941.1e-6963.29Show/hide
Query:  QMYGMDYFDTFSHVAKLISIRLFLSMAATHNWPLHQLDIKNVLLHSDLPEDVYMEQPPGFVAQGESGKVCCLPQSLCELKQSPHGWFGKLNQALEYFSMK
        Q YG+DY DTFS VA+L S+RL +S+AA+ +WPLHQ+DIKN  LH DL E+VYMEQPPGFVAQGE GKVC L +SL  LKQSP  WFGK ++ ++ F M 
Subjt:  QMYGMDYFDTFSHVAKLISIRLFLSMAATHNWPLHQLDIKNVLLHSDLPEDVYMEQPPGFVAQGESGKVCCLPQSLCELKQSPHGWFGKLNQALEYFSMK

Query:  KSTYDNFVFYRRSDNGITLFVVYVDDVVITGNDVLGISPLKTFLQGLFHTTNLERLKYFLGIEVMTSKKGIYPSQWKYAFDLLFEIGKLGIKPCSTSMIP
        KS  D+ VFYR+S NGI L VVY+DD+VITG+D  GIS LK F+   FHT +L  LKYFLG+EV  SK+GI+ SQ KY  DLL EIGK+  KPCSTSMIP
Subjt:  KSTYDNFVFYRRSDNGITLFVVYVDDVVITGNDVLGISPLKTFLQGLFHTTNLERLKYFLGIEVMTSKKGIYPSQWKYAFDLLFEIGKLGIKPCSTSMIP

Query:  NFRLAKE
        N  L K+
Subjt:  NFRLAKE

A0A438GNW5 Retrovirus-related Pol polyprotein from transposon RE13.9e-6762.25Show/hide
Query:  QMYGMDYFDTFSHVAKLISIRLFLSMAATHNWPLHQLDIKNVLLHSDLPEDVYMEQPPGFVAQGESGKVCCLPQSLCELKQSPHGWFGKLNQALEYFSMK
        Q YG+DY DTFS VAKL S+RLF+S+AA+  W +HQLDIKN  LH DL E+VY+EQPPGFV QGE GKVCCL ++L  LKQSPH WFGK ++ ++ F M 
Subjt:  QMYGMDYFDTFSHVAKLISIRLFLSMAATHNWPLHQLDIKNVLLHSDLPEDVYMEQPPGFVAQGESGKVCCLPQSLCELKQSPHGWFGKLNQALEYFSMK

Query:  KSTYDNFVFYRRSDNGITLFVVYVDDVVITGNDVLGISPLKTFLQGLFHTTNLERLKYFLGIEVMTSKKGIYPSQWKYAFDLLFEIGKLGIKPCSTSMIP
        KS  D+ VFY++S  GI L VVYVDD+VIT ND  GIS LKTF+   FHT +L  LKYFLGIEV+ SKKG++ SQ KY  DLL E GK+  KPC+T M+P
Subjt:  KSTYDNFVFYRRSDNGITLFVVYVDDVVITGNDVLGISPLKTFLQGLFHTTNLERLKYFLGIEVMTSKKGIYPSQWKYAFDLLFEIGKLGIKPCSTSMIP

Query:  NFRL
        N +L
Subjt:  NFRL

A0A438HAW7 Retrovirus-related Pol polyprotein from transposon RE11.9e-6662.25Show/hide
Query:  QMYGMDYFDTFSHVAKLISIRLFLSMAATHNWPLHQLDIKNVLLHSDLPEDVYMEQPPGFVAQGESGKVCCLPQSLCELKQSPHGWFGKLNQALEYFSMK
        Q YG+DYFDTFS VAKL S+RLF+S+AA+  W +HQLDIKN  LH DL E+VY+EQPPGFVAQGE GKVC L ++L  L QSP  WFGK ++ ++ F M 
Subjt:  QMYGMDYFDTFSHVAKLISIRLFLSMAATHNWPLHQLDIKNVLLHSDLPEDVYMEQPPGFVAQGESGKVCCLPQSLCELKQSPHGWFGKLNQALEYFSMK

Query:  KSTYDNFVFYRRSDNGITLFVVYVDDVVITGNDVLGISPLKTFLQGLFHTTNLERLKYFLGIEVMTSKKGIYPSQWKYAFDLLFEIGKLGIKPCSTSMIP
        KS  D+ VFY++S  GI L VVYVDD+VITGND  GIS LKTF+   FHT +L  LKYFLGIEV  SKKG++ SQ KY  DLL E GK+  KPC+T M+P
Subjt:  KSTYDNFVFYRRSDNGITLFVVYVDDVVITGNDVLGISPLKTFLQGLFHTTNLERLKYFLGIEVMTSKKGIYPSQWKYAFDLLFEIGKLGIKPCSTSMIP

Query:  NFRL
        N +L
Subjt:  NFRL

A5AVD6 CCHC-type domain-containing protein5.0e-6762.25Show/hide
Query:  QMYGMDYFDTFSHVAKLISIRLFLSMAATHNWPLHQLDIKNVLLHSDLPEDVYMEQPPGFVAQGESGKVCCLPQSLCELKQSPHGWFGKLNQALEYFSMK
        Q YG+DY DTFS VAKL S+RLF+S+ A+  W +HQLDIKN  LH DL E+VY+EQPPGFVAQGE GKVCCL ++L  LKQSPH WFGK ++ ++ F M 
Subjt:  QMYGMDYFDTFSHVAKLISIRLFLSMAATHNWPLHQLDIKNVLLHSDLPEDVYMEQPPGFVAQGESGKVCCLPQSLCELKQSPHGWFGKLNQALEYFSMK

Query:  KSTYDNFVFYRRSDNGITLFVVYVDDVVITGNDVLGISPLKTFLQGLFHTTNLERLKYFLGIEVMTSKKGIYPSQWKYAFDLLFEIGKLGIKPCSTSMIP
        KS  D+ VFY++S  GI L VVYVDD+VI GND  GIS LK F+   FHT +L  LKYFLGIEV  SKKG++ SQ KY  DLL E GK+  KPC+TSM+P
Subjt:  KSTYDNFVFYRRSDNGITLFVVYVDDVVITGNDVLGISPLKTFLQGLFHTTNLERLKYFLGIEVMTSKKGIYPSQWKYAFDLLFEIGKLGIKPCSTSMIP

Query:  NFRL
        N +L
Subjt:  NFRL

Q6L3Q0 Polyprotein, putative3.0e-6762.8Show/hide
Query:  QMYGMDYFDTFSHVAKLISIRLFLSMAATHNWPLHQLDIKNVLLHSDLPEDVYMEQPPGFVAQGESGKVCCLPQSLCELKQSPHGWFGKLNQALEYFSMK
        Q YG+DY DTFS VAKL S+RLF+S+AA+ NWPLHQL IKN  LH DL E+VYMEQPPGFVAQGE+GKVC L + L  LKQSP  WFGK ++ ++ F + 
Subjt:  QMYGMDYFDTFSHVAKLISIRLFLSMAATHNWPLHQLDIKNVLLHSDLPEDVYMEQPPGFVAQGESGKVCCLPQSLCELKQSPHGWFGKLNQALEYFSMK

Query:  KSTYDNFVFYRRSDNGITLFVVYVDDVVITGNDVLGISPLKTFLQGLFHTTNLERLKYFLGIEVMTSKKGIYPSQWKYAFDLLFEIGKLGIKPCSTSMIP
        KS  D+ VFYR+S  GI L VVYVDD+VIT +D  GIS LK FL  +FHT +L +LKYFLGIEV  SKKGI+ SQ KY  DLL E GK   KPCST M+P
Subjt:  KSTYDNFVFYRRSDNGITLFVVYVDDVVITGNDVLGISPLKTFLQGLFHTTNLERLKYFLGIEVMTSKKGIYPSQWKYAFDLLFEIGKLGIKPCSTSMIP

Query:  NFRLAKE
        N +L  +
Subjt:  NFRLAKE

SwissProt top hitse value%identityAlignment
P04146 Copia protein8.7e-2432.18Show/hide
Query:  QMYGMDYFDTFSHVAKLISIRLFLSMAATHNWPLHQLDIKNVLLHSDLPEDVYMEQPPGFVAQGESGKVCCLPQSLCELKQSPHGWFGKLNQALEYFSMK
        Q Y +DY +TF+ VA++ S R  LS+   +N  +HQ+D+K   L+  L E++YM  P G      S  VC L +++  LKQ+   WF    QAL+     
Subjt:  QMYGMDYFDTFSHVAKLISIRLFLSMAATHNWPLHQLDIKNVLLHSDLPEDVYMEQPPGFVAQGESGKVCCLPQSLCELKQSPHGWFGKLNQALEYFSMK

Query:  KSTYDN--FVFYRRSDNGITLFVVYVDDVVITGNDVLGISPLKTFLQGLFHTTNLERLKYFLGIEVMTSKKGIYPSQWKYAFDLLFEIGKLGIKPCSTSM
         S+ D   ++  + + N     ++YVDDVVI   D+  ++  K +L   F  T+L  +K+F+GI +   +  IY SQ  Y   +L    K  ++ C+   
Subjt:  KSTYDN--FVFYRRSDNGITLFVVYVDDVVITGNDVLGISPLKTFLQGLFHTTNLERLKYFLGIEVMTSKKGIYPSQWKYAFDLLFEIGKLGIKPCSTSM

Query:  IP
         P
Subjt:  IP

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-942.4e-2936.49Show/hide
Query:  QMYGMDYFDTFSHVAKLISIRLFLSMAATHNWPLHQLDIKNVLLHSDLPEDVYMEQPPGFVAQGESGKVCCLPQSLCELKQSPHGWFGKLNQALEYFSMK
        Q  G+D+ + FS V K+ SIR  LS+AA+ +  + QLD+K   LH DL E++YMEQP GF   G+   VC L +SL  LKQ+P  W+ K +  ++  +  
Subjt:  QMYGMDYFDTFSHVAKLISIRLFLSMAATHNWPLHQLDIKNVLLHSDLPEDVYMEQPPGFVAQGESGKVCCLPQSLCELKQSPHGWFGKLNQALEYFSMK

Query:  KSTYDNFVFYRR-SDNGITLFVVYVDDVVITGNDVLGISPLKTFLQGLFHTTNLERLKYFLGIEVM---TSKKGIYPSQWKYAFDLLFEIGKLGIKPCST
        K+  D  V+++R S+N   + ++YVDD++I G D   I+ LK  L   F   +L   +  LG++++   TS+K ++ SQ KY   +L        KP ST
Subjt:  KSTYDNFVFYRR-SDNGITLFVVYVDDVVITGNDVLGISPLKTFLQGLFHTTNLERLKYFLGIEVM---TSKKGIYPSQWKYAFDLLFEIGKLGIKPCST

Query:  SMIPNFRLAKE
         +  + +L+K+
Subjt:  SMIPNFRLAKE

P25600 Putative transposon Ty5-1 protein YCL074W1.4e-1025.29Show/hide
Query:  LDIKNVLLHSDLPEDVYMEQPPGFVAQGESGKVCCLPQSLCELKQSPHGWFGKLNQALEYFSMKKSTYDNFVFYRRSDNGITLFVVYVDDVVITGNDVLG
        +D+    L+S + E +Y++QPPGFV +     V  L   +  LKQ+P  W   +N  L+     +   ++ +++R + +G     VYVDD+++       
Subjt:  LDIKNVLLHSDLPEDVYMEQPPGFVAQGESGKVCCLPQSLCELKQSPHGWFGKLNQALEYFSMKKSTYDNFVFYRRSDNGITLFVVYVDDVVITGNDVLG

Query:  ISPLKTFLQGLFHTTNLERLKYFLGIEVMTSKKGIYPSQWKYAFDLLFEIGKLGIKPCSTSMIPNFRLAK
           +K  L  L+   +L ++  FLG+ +  S  G          D+   +     K  S S I  F+L +
Subjt:  ISPLKTFLQGLFHTTNLERLKYFLGIEVMTSKKGIYPSQWKYAFDLLFEIGKLGIKPCSTSMIPNFRLAK

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE18.3e-3538.54Show/hide
Query:  QMYGMDYFDTFSHVAKLISIRLFLSMAATHNWPLHQLDIKNVLLHSDLPEDVYMEQPPGFVAQGESGKVCCLPQSLCELKQSPHGWFGKLNQALEYFSMK
        Q  G+DY +TFS V K  SIR+ L +A   +WP+ QLD+ N  L   L +DVYM QPPGF+ +     VC L ++L  LKQ+P  W+ +L   L      
Subjt:  QMYGMDYFDTFSHVAKLISIRLFLSMAATHNWPLHQLDIKNVLLHSDLPEDVYMEQPPGFVAQGESGKVCCLPQSLCELKQSPHGWFGKLNQALEYFSMK

Query:  KSTYDNFVFYRRSDNGITLFVVYVDDVVITGNDVLGISPLKTFLQGLFHTTNLERLKYFLGIEVMTSKKGIYPSQWKYAFDLLFEIGKLGIKPCSTSMIP
         S  D  +F  +    I   +VYVDD++ITGND   +      L   F   + E L YFLGIE      G++ SQ +Y  DLL     +  KP +T M P
Subjt:  KSTYDNFVFYRRSDNGITLFVVYVDDVVITGNDVLGISPLKTFLQGLFHTTNLERLKYFLGIEVMTSKKGIYPSQWKYAFDLLFEIGKLGIKPCSTSMIP

Query:  NFRLA
        + +L+
Subjt:  NFRLA

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE22.1e-3338.24Show/hide
Query:  QMYGMDYFDTFSHVAKLISIRLFLSMAATHNWPLHQLDIKNVLLHSDLPEDVYMEQPPGFVAQGESGKVCCLPQSLCELKQSPHGWFGKLNQALEYFSMK
        Q  G+DY +TFS V K  SIR+ L +A   +WP+ QLD+ N  L   L ++VYM QPPGFV +     VC L +++  LKQ+P  W+ +L   L      
Subjt:  QMYGMDYFDTFSHVAKLISIRLFLSMAATHNWPLHQLDIKNVLLHSDLPEDVYMEQPPGFVAQGESGKVCCLPQSLCELKQSPHGWFGKLNQALEYFSMK

Query:  KSTYDNFVFYRRSDNGITLFVVYVDDVVITGNDVLGISPLKTFLQGLFHTTNLERLKYFLGIEVMTSKKGIYPSQWKYAFDLLFEIGKLGIKPCSTSMIP
         S  D  +F  +    I   +VYVDD++ITGND + +      L   F     E L YFLGIE     +G++ SQ +Y  DLL     L  KP +T M  
Subjt:  KSTYDNFVFYRRSDNGITLFVVYVDDVVITGNDVLGISPLKTFLQGLFHTTNLERLKYFLGIEVMTSKKGIYPSQWKYAFDLLFEIGKLGIKPCSTSMIP

Query:  NFRL
        + +L
Subjt:  NFRL

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 82.2e-3842.44Show/hide
Query:  QMYGMDYFDTFSHVAKLISIRLFLSMAATHNWPLHQLDIKNVLLHSDLPEDVYMEQPPGFVA-QGES---GKVCCLPQSLCELKQSPHGWFGKLNQALEY
        Q  G+D+ +TFS V KL S++L L+++A +N+ LHQLDI N  L+ DL E++YM+ PPG+ A QG+S     VC L +S+  LKQ+   WF K +  L  
Subjt:  QMYGMDYFDTFSHVAKLISIRLFLSMAATHNWPLHQLDIKNVLLHSDLPEDVYMEQPPGFVA-QGES---GKVCCLPQSLCELKQSPHGWFGKLNQALEY

Query:  FSMKKSTYDNFVFYRRSDNGITLFVVYVDDVVITGNDVLGISPLKTFLQGLFHTTNLERLKYFLGIEVMTSKKGIYPSQWKYAFDLLFEIGKLGIKPCST
        F   +S  D+  F + +       +VYVDD++I  N+   +  LK+ L+  F   +L  LKYFLG+E+  S  GI   Q KYA DLL E G LG KP S 
Subjt:  FSMKKSTYDNFVFYRRSDNGITLFVVYVDDVVITGNDVLGISPLKTFLQGLFHTTNLERLKYFLGIEVMTSKKGIYPSQWKYAFDLLFEIGKLGIKPCST

Query:  SMIPN
         M P+
Subjt:  SMIPN

ATMG00810.1 DNA/RNA polymerases superfamily protein5.2e-0837.18Show/hide
Query:  VVYVDDVVITGNDVLGISPLKTFLQGLFHTTNLERLKYFLGIEVMTSKKGIYPSQWKYAFDLLFEIGKLGIKPCSTSM
        ++YVDD+++TG+    ++ L   L   F   +L  + YFLGI++ T   G++ SQ KYA  +L   G L  KP ST +
Subjt:  VVYVDDVVITGNDVLGISPLKTFLQGLFHTTNLERLKYFLGIEVMTSKKGIYPSQWKYAFDLLFEIGKLGIKPCSTSM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGTTTGCTATAAAGGTAAATTCCGTTGGAACAGTGGCTCGGTTGAAAGTTCGTCTCATTGCCAAAGGTTATGCCAAATGTATGGAATGGATTATTTTGATACATT
TTCTCATGTTGCCAAGTTAATTTCCATTCGACTATTTCTTTCCATGGCTGCTACTCACAATTGGCCTTTACATCAACTCGACATTAAGAATGTTCTTCTTCATAGTGATC
TTCCAGAGGATGTTTATATGGAGCAACCACCTGGGTTTGTTGCTCAGGGGGAGAGTGGTAAGGTGTGTTGCCTTCCACAATCTTTGTGTGAACTGAAACAAAGCCCTCAT
GGATGGTTTGGTAAGTTAAATCAAGCACTAGAGTATTTTAGCATGAAGAAAAGTACATATGATAATTTCGTATTCTATCGACGATCTGACAATGGTATTACTTTGTTTGT
TGTATATGTTGACGATGTCGTTATCACTGGAAATGATGTGTTAGGTATATCTCCTCTCAAGACTTTCCTCCAAGGTTTATTTCATACCACAAATTTGGAGCGATTGAAGT
ATTTCTTGGGTATTGAAGTAATGACAAGTAAGAAAGGTATTTACCCATCCCAATGGAAATATGCGTTTGATTTGTTGTTTGAGATAGGTAAACTAGGAATCAAACCATGT
AGTACTTCAATGATACCAAATTTTCGACTTGCTAAGGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTGTTTGCTATAAAGGTAAATTCCGTTGGAACAGTGGCTCGGTTGAAAGTTCGTCTCATTGCCAAAGGTTATGCCAAATGTATGGAATGGATTATTTTGATACATT
TTCTCATGTTGCCAAGTTAATTTCCATTCGACTATTTCTTTCCATGGCTGCTACTCACAATTGGCCTTTACATCAACTCGACATTAAGAATGTTCTTCTTCATAGTGATC
TTCCAGAGGATGTTTATATGGAGCAACCACCTGGGTTTGTTGCTCAGGGGGAGAGTGGTAAGGTGTGTTGCCTTCCACAATCTTTGTGTGAACTGAAACAAAGCCCTCAT
GGATGGTTTGGTAAGTTAAATCAAGCACTAGAGTATTTTAGCATGAAGAAAAGTACATATGATAATTTCGTATTCTATCGACGATCTGACAATGGTATTACTTTGTTTGT
TGTATATGTTGACGATGTCGTTATCACTGGAAATGATGTGTTAGGTATATCTCCTCTCAAGACTTTCCTCCAAGGTTTATTTCATACCACAAATTTGGAGCGATTGAAGT
ATTTCTTGGGTATTGAAGTAATGACAAGTAAGAAAGGTATTTACCCATCCCAATGGAAATATGCGTTTGATTTGTTGTTTGAGATAGGTAAACTAGGAATCAAACCATGT
AGTACTTCAATGATACCAAATTTTCGACTTGCTAAGGAATGA
Protein sequenceShow/hide protein sequence
MGVCYKGKFRWNSGSVESSSHCQRLCQMYGMDYFDTFSHVAKLISIRLFLSMAATHNWPLHQLDIKNVLLHSDLPEDVYMEQPPGFVAQGESGKVCCLPQSLCELKQSPH
GWFGKLNQALEYFSMKKSTYDNFVFYRRSDNGITLFVVYVDDVVITGNDVLGISPLKTFLQGLFHTTNLERLKYFLGIEVMTSKKGIYPSQWKYAFDLLFEIGKLGIKPC
STSMIPNFRLAKE