| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0025945.1 gag/pol protein [Cucumis melo var. makuwa] | 3.4e-59 | 88.55 | Show/hide |
Query: MLKSIRILLSIATFYDYEIWQMDVKTTFLNGNLEESIFISQPEGFIIQGQEQKVCKLNRSIYGLKQASRSWNIKFDTAIKSYDFDQNVNELCIYEKINKS
MLKSIRILLSIATFYDYEIWQMDVKT FLNGNLEESIF+SQPEGFI QGQEQKVCKLNRSIYGLKQASRSWNI+FDTAIKSY FDQNV+E C+Y+KINK
Subjt: MLKSIRILLSIATFYDYEIWQMDVKTTFLNGNLEESIFISQPEGFIIQGQEQKVCKLNRSIYGLKQASRSWNIKFDTAIKSYDFDQNVNELCIYEKINKS
Query: TVAFLVLYADDILLIGNDMGYLIDVKTWLAA
VAFLVLY DDILLIGND+GYL DVK WLAA
Subjt: TVAFLVLYADDILLIGNDMGYLIDVKTWLAA
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| KAA0035907.1 gag/pol protein [Cucumis melo var. makuwa] | 1.7e-58 | 87.79 | Show/hide |
Query: MLKSIRILLSIATFYDYEIWQMDVKTTFLNGNLEESIFISQPEGFIIQGQEQKVCKLNRSIYGLKQASRSWNIKFDTAIKSYDFDQNVNELCIYEKINKS
MLKSIRILLSIA FYDYEIWQMDVKT FLNGNLEESIF+SQPEGFI QGQEQKVCKLNRSIYGLKQASRSWNI+FDTAIKSY FDQNV+E C+Y+KINK
Subjt: MLKSIRILLSIATFYDYEIWQMDVKTTFLNGNLEESIFISQPEGFIIQGQEQKVCKLNRSIYGLKQASRSWNIKFDTAIKSYDFDQNVNELCIYEKINKS
Query: TVAFLVLYADDILLIGNDMGYLIDVKTWLAA
VAFLVLY DDILLIGND+GYL DVK WLAA
Subjt: TVAFLVLYADDILLIGNDMGYLIDVKTWLAA
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| KAA0058278.1 gag/pol protein [Cucumis melo var. makuwa] | 2.2e-58 | 87.79 | Show/hide |
Query: MLKSIRILLSIATFYDYEIWQMDVKTTFLNGNLEESIFISQPEGFIIQGQEQKVCKLNRSIYGLKQASRSWNIKFDTAIKSYDFDQNVNELCIYEKINKS
MLKSIRILLSIATFYDYEIWQMDVKT FLN NLEESIF+SQPEGFI QGQEQKVCKLNRSIYGLKQASRSWNI+FDTAIKSY FDQNV+E C+Y+KINK
Subjt: MLKSIRILLSIATFYDYEIWQMDVKTTFLNGNLEESIFISQPEGFIIQGQEQKVCKLNRSIYGLKQASRSWNIKFDTAIKSYDFDQNVNELCIYEKINKS
Query: TVAFLVLYADDILLIGNDMGYLIDVKTWLAA
VAFLVLY DDILLIGND+GYL DVK WLAA
Subjt: TVAFLVLYADDILLIGNDMGYLIDVKTWLAA
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| KAA0059226.1 gag/pol protein [Cucumis melo var. makuwa] | 3.4e-59 | 88.55 | Show/hide |
Query: MLKSIRILLSIATFYDYEIWQMDVKTTFLNGNLEESIFISQPEGFIIQGQEQKVCKLNRSIYGLKQASRSWNIKFDTAIKSYDFDQNVNELCIYEKINKS
MLKSIRILLSIATFYDYEIWQMDVKT FLNGNLEESIF+SQPEGFI QGQEQKVCKLNRSIYGLKQASRSWNI+FDTAIKSY FDQNV+E C+Y+KINK
Subjt: MLKSIRILLSIATFYDYEIWQMDVKTTFLNGNLEESIFISQPEGFIIQGQEQKVCKLNRSIYGLKQASRSWNIKFDTAIKSYDFDQNVNELCIYEKINKS
Query: TVAFLVLYADDILLIGNDMGYLIDVKTWLAA
VAFLVLY DDILLIGND+GYL DVK WLAA
Subjt: TVAFLVLYADDILLIGNDMGYLIDVKTWLAA
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| TYK15984.1 gag/pol protein [Cucumis melo var. makuwa] | 3.4e-59 | 88.55 | Show/hide |
Query: MLKSIRILLSIATFYDYEIWQMDVKTTFLNGNLEESIFISQPEGFIIQGQEQKVCKLNRSIYGLKQASRSWNIKFDTAIKSYDFDQNVNELCIYEKINKS
MLKSIRILLSIATFYDYEIWQMDVKT FLNGNLEESIF+SQPEGFI QGQEQKVCKLNRSIYGLKQASRSWNI+FDTAIKSY FDQNV+E C+Y+KINK
Subjt: MLKSIRILLSIATFYDYEIWQMDVKTTFLNGNLEESIFISQPEGFIIQGQEQKVCKLNRSIYGLKQASRSWNIKFDTAIKSYDFDQNVNELCIYEKINKS
Query: TVAFLVLYADDILLIGNDMGYLIDVKTWLAA
VAFLVLY DDILLIGND+GYL DVK WLAA
Subjt: TVAFLVLYADDILLIGNDMGYLIDVKTWLAA
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7T2V9 Gag/pol protein | 8.3e-59 | 87.79 | Show/hide |
Query: MLKSIRILLSIATFYDYEIWQMDVKTTFLNGNLEESIFISQPEGFIIQGQEQKVCKLNRSIYGLKQASRSWNIKFDTAIKSYDFDQNVNELCIYEKINKS
MLKSIRILLSIA FYDYEIWQMDVKT FLNGNLEESIF+SQPEGFI QGQEQKVCKLNRSIYGLKQASRSWNI+FDTAIKSY FDQNV+E C+Y+KINK
Subjt: MLKSIRILLSIATFYDYEIWQMDVKTTFLNGNLEESIFISQPEGFIIQGQEQKVCKLNRSIYGLKQASRSWNIKFDTAIKSYDFDQNVNELCIYEKINKS
Query: TVAFLVLYADDILLIGNDMGYLIDVKTWLAA
VAFLVLY DDILLIGND+GYL DVK WLAA
Subjt: TVAFLVLYADDILLIGNDMGYLIDVKTWLAA
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| A0A5A7TZD0 Gag/pol protein | 1.7e-59 | 88.55 | Show/hide |
Query: MLKSIRILLSIATFYDYEIWQMDVKTTFLNGNLEESIFISQPEGFIIQGQEQKVCKLNRSIYGLKQASRSWNIKFDTAIKSYDFDQNVNELCIYEKINKS
MLKSIRILLSIATFYDYEIWQMDVKT FLNGNLEESIF+SQPEGFI QGQEQKVCKLNRSIYGLKQASRSWNI+FDTAIKSY FDQNV+E C+Y+KINK
Subjt: MLKSIRILLSIATFYDYEIWQMDVKTTFLNGNLEESIFISQPEGFIIQGQEQKVCKLNRSIYGLKQASRSWNIKFDTAIKSYDFDQNVNELCIYEKINKS
Query: TVAFLVLYADDILLIGNDMGYLIDVKTWLAA
VAFLVLY DDILLIGND+GYL DVK WLAA
Subjt: TVAFLVLYADDILLIGNDMGYLIDVKTWLAA
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| A0A5A7USZ2 Gag/pol protein | 1.1e-58 | 87.79 | Show/hide |
Query: MLKSIRILLSIATFYDYEIWQMDVKTTFLNGNLEESIFISQPEGFIIQGQEQKVCKLNRSIYGLKQASRSWNIKFDTAIKSYDFDQNVNELCIYEKINKS
MLKSIRILLSIATFYDYEIWQMDVKT FLN NLEESIF+SQPEGFI QGQEQKVCKLNRSIYGLKQASRSWNI+FDTAIKSY FDQNV+E C+Y+KINK
Subjt: MLKSIRILLSIATFYDYEIWQMDVKTTFLNGNLEESIFISQPEGFIIQGQEQKVCKLNRSIYGLKQASRSWNIKFDTAIKSYDFDQNVNELCIYEKINKS
Query: TVAFLVLYADDILLIGNDMGYLIDVKTWLAA
VAFLVLY DDILLIGND+GYL DVK WLAA
Subjt: TVAFLVLYADDILLIGNDMGYLIDVKTWLAA
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| A0A5A7UYE8 Gag/pol protein | 1.7e-59 | 88.55 | Show/hide |
Query: MLKSIRILLSIATFYDYEIWQMDVKTTFLNGNLEESIFISQPEGFIIQGQEQKVCKLNRSIYGLKQASRSWNIKFDTAIKSYDFDQNVNELCIYEKINKS
MLKSIRILLSIATFYDYEIWQMDVKT FLNGNLEESIF+SQPEGFI QGQEQKVCKLNRSIYGLKQASRSWNI+FDTAIKSY FDQNV+E C+Y+KINK
Subjt: MLKSIRILLSIATFYDYEIWQMDVKTTFLNGNLEESIFISQPEGFIIQGQEQKVCKLNRSIYGLKQASRSWNIKFDTAIKSYDFDQNVNELCIYEKINKS
Query: TVAFLVLYADDILLIGNDMGYLIDVKTWLAA
VAFLVLY DDILLIGND+GYL DVK WLAA
Subjt: TVAFLVLYADDILLIGNDMGYLIDVKTWLAA
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| A0A5D3CYF4 Gag/pol protein | 1.7e-59 | 88.55 | Show/hide |
Query: MLKSIRILLSIATFYDYEIWQMDVKTTFLNGNLEESIFISQPEGFIIQGQEQKVCKLNRSIYGLKQASRSWNIKFDTAIKSYDFDQNVNELCIYEKINKS
MLKSIRILLSIATFYDYEIWQMDVKT FLNGNLEESIF+SQPEGFI QGQEQKVCKLNRSIYGLKQASRSWNI+FDTAIKSY FDQNV+E C+Y+KINK
Subjt: MLKSIRILLSIATFYDYEIWQMDVKTTFLNGNLEESIFISQPEGFIIQGQEQKVCKLNRSIYGLKQASRSWNIKFDTAIKSYDFDQNVNELCIYEKINKS
Query: TVAFLVLYADDILLIGNDMGYLIDVKTWLAA
VAFLVLY DDILLIGND+GYL DVK WLAA
Subjt: TVAFLVLYADDILLIGNDMGYLIDVKTWLAA
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 5.6e-20 | 40 | Show/hide |
Query: LKSIRILLSIATFYDYEIWQMDVKTTFLNGNLEESIFISQPEGFIIQGQEQKVCKLNRSIYGLKQASRSWNIKFDTAIKSYDFDQNVNELCIY--EKINK
+ S R +LS+ Y+ ++ QMDVKT FLNG L+E I++ P+G I VCKLN++IYGLKQA+R W F+ A+K +F + + CIY +K N
Subjt: LKSIRILLSIATFYDYEIWQMDVKTTFLNGNLEESIFISQPEGFIIQGQEQKVCKLNRSIYGLKQASRSWNIKFDTAIKSYDFDQNVNELCIY--EKINK
Query: STVAFLVLYADDILLIGNDMGYLIDVKTWL
+ +++LY DD+++ DM + + K +L
Subjt: STVAFLVLYADDILLIGNDMGYLIDVKTWL
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 7.3e-28 | 45.24 | Show/hide |
Query: LKSIRILLSIATFYDYEIWQMDVKTTFLNGNLEESIFISQPEGFIIQGQEQKVCKLNRSIYGLKQASRSWNIKFDTAIKSYDFDQNVNELCIY-EKINKS
+ SIR +LS+A D E+ Q+DVKT FL+G+LEE I++ QPEGF + G++ VCKLN+S+YGLKQA R W +KFD+ +KS + + ++ C+Y ++ +++
Subjt: LKSIRILLSIATFYDYEIWQMDVKTTFLNGNLEESIFISQPEGFIIQGQEQKVCKLNRSIYGLKQASRSWNIKFDTAIKSYDFDQNVNELCIY-EKINKS
Query: TVAFLVLYADDILLIGNDMGYLIDVK
L+LY DD+L++G D G + +K
Subjt: TVAFLVLYADDILLIGNDMGYLIDVK
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| P25600 Putative transposon Ty5-1 protein YCL074W | 6.8e-10 | 33.33 | Show/hide |
Query: MDVKTTFLNGNLEESIFISQPEGFIIQGQEQKVCKLNRSIYGLKQASRSWNIKFDTAIKSYDFDQNVNELCIYEKINKSTVAFLVLYADDILL
MDV T FLN ++E I++ QP GF+ + V +L +YGLKQA WN + +K F ++ E +Y + ++ +Y DD+L+
Subjt: MDVKTTFLNGNLEESIFISQPEGFIIQGQEQKVCKLNRSIYGLKQASRSWNIKFDTAIKSYDFDQNVNELCIYEKINKSTVAFLVLYADDILL
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 2.3e-18 | 36.52 | Show/hide |
Query: SIRILLSIATFYDYEIWQMDVKTTFLNGNLEESIFISQPEGFIIQGQEQKVCKLNRSIYGLKQASRSWNIKFDTAIKSYDFDQNVNELCIYEKINKSTVA
SIRI+L +A + I Q+DV FL G L + +++SQP GFI + + VCKL +++YGLKQA R+W ++ + + F +V++ ++ ++
Subjt: SIRILLSIATFYDYEIWQMDVKTTFLNGNLEESIFISQPEGFIIQGQEQKVCKLNRSIYGLKQASRSWNIKFDTAIKSYDFDQNVNELCIYEKINKSTVA
Query: FLVLYADDILLIGND
++++Y DDIL+ GND
Subjt: FLVLYADDILLIGND
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 2.3e-18 | 35.65 | Show/hide |
Query: SIRILLSIATFYDYEIWQMDVKTTFLNGNLEESIFISQPEGFIIQGQEQKVCKLNRSIYGLKQASRSWNIKFDTAIKSYDFDQNVNELCIYEKINKSTVA
SIRI+L +A + I Q+DV FL G L + +++SQP GF+ + + VC+L ++IYGLKQA R+W ++ T + + F ++++ ++ ++
Subjt: SIRILLSIATFYDYEIWQMDVKTTFLNGNLEESIFISQPEGFIIQGQEQKVCKLNRSIYGLKQASRSWNIKFDTAIKSYDFDQNVNELCIYEKINKSTVA
Query: FLVLYADDILLIGND
++++Y DDIL+ GND
Subjt: FLVLYADDILLIGND
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