; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc08g0227671 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc08g0227671
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase
Genome locationCMiso1.1chr08:20959406..20961277
RNA-Seq ExpressionCmc08g0227671
SyntenyCmc08g0227671
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR021109 - Aspartic peptidase domain superfamily
IPR041373 - Reverse transcriptase, RNase H-like domain
IPR043128 - Reverse transcriptase/Diguanylate cyclase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032541.1 pol protein [Cucumis melo var. makuwa]0.0e+0096.31Show/hide
Query:  MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAGMVCIPKVISAMKASKLRSQGTWGILASVVDIREPEVSLSSEPVVREY
        MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEV+FNPPSGASFKFRGAGMVCIPKVISAMKASKL SQGTWGILASVVDIREPEVSLSSEPVVREY
Subjt:  MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAGMVCIPKVISAMKASKLRSQGTWGILASVVDIREPEVSLSSEPVVREY

Query:  PDVFPDELPGLPPPREVDFTIELEPGTAHISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNCYPLP
        PDVFPDELPGLPPPREVDF IELEPGTA ISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKN YPLP
Subjt:  PDVFPDELPGLPPPREVDFTIELEPGTAHISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNCYPLP

Query:  RIDDLFDQLQGATVFSKIDLRSGYHQLGIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDLFVIVFIDDILIYSKTEAEHEEHLH
        RIDDLFDQLQGATVFSKIDLRSGYHQL IRDGDIPKTAFRSRYGHY+FVVMSFGLTNAPAVFMDLMNRVFKDFLD FVIVFIDDILIYSKTEAEHEEHLH
Subjt:  RIDDLFDQLQGATVFSKIDLRSGYHQLGIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDLFVIVFIDDILIYSKTEAEHEEHLH

Query:  QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRSSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPTCE
        QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPR STVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSP CE
Subjt:  QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRSSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPTCE

Query:  SSFQELKQKLVTAPVLTVLDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKTHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFF
         SFQELKQKLVTAPVLTV DGSG+FVIYSDASKKGLGCVLMQQGKVVAYASRQLK HEQNYPTHDLELAAVVFALKIWRHYLY EKIQIYTDHKSLKYFF
Subjt:  SSFQELKQKLVTAPVLTVLDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKTHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFF

Query:  TQRELNMRQRRWLELVKDYDCEILYHPGKPNVVADVLSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLVEK
        TQ+ELNMRQRRWLELVKDYDCEILYHPGK NVVAD LSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQ NDPYL EK
Subjt:  TQRELNMRQRRWLELVKDYDCEILYHPGKPNVVADVLSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLVEK

Query:  RRTVETGQGEDFFISSDDGLMFE
        RR VETGQGEDF IS+DDGLMFE
Subjt:  RRTVETGQGEDFFISSDDGLMFE

KAA0037369.1 pol protein [Cucumis melo var. makuwa]0.0e+0096.31Show/hide
Query:  MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAGMVCIPKVISAMKASKLRSQGTWGILASVVDIREPEVSLSSEPVVREY
        MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFRG G+VCIPKVISAMKASKL SQGTWGILASVVDIREPEVSLSSEPVVREY
Subjt:  MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAGMVCIPKVISAMKASKLRSQGTWGILASVVDIREPEVSLSSEPVVREY

Query:  PDVFPDELPGLPPPREVDFTIELEPGTAHISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNCYPLP
        PDVFPDELPGLPPPREVDF IELEPGTA ISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKN YPLP
Subjt:  PDVFPDELPGLPPPREVDFTIELEPGTAHISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNCYPLP

Query:  RIDDLFDQLQGATVFSKIDLRSGYHQLGIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDLFVIVFIDDILIYSKTEAEHEEHLH
        RIDDLFDQLQGATVFSKIDLRSGYHQL IRDGDIPKTAFRSRYGHYEFVVMSFGLT APAVFMDLMNR+FKDFLD FVIVFIDDILIYSKTEAEHEEHLH
Subjt:  RIDDLFDQLQGATVFSKIDLRSGYHQLGIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDLFVIVFIDDILIYSKTEAEHEEHLH

Query:  QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRSSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPTCE
        QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPR STVSEIRSFLGLAGYYRRFVEDFSRIA+PLTQLTRKG PFVWSP CE
Subjt:  QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRSSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPTCE

Query:  SSFQELKQKLVTAPVLTVLDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKTHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFF
        SSFQELKQKLVTAPVLTV DGSG+FVIYSDASKKGLGCVLMQQGKVVAYASRQLK HEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFF
Subjt:  SSFQELKQKLVTAPVLTVLDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKTHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFF

Query:  TQRELNMRQRRWLELVKDYDCEILYHPGKPNVVADVLSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLVEK
        TQ+ELNMRQRRWLELVKDYDCEILYHPGK NVVAD LSRKVAHSAALITKQTPLL+DFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLVEK
Subjt:  TQRELNMRQRRWLELVKDYDCEILYHPGKPNVVADVLSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLVEK

Query:  RRTVETGQGEDFFISSDDGLMFE
        RR VETGQGEDF ISSDDGLMFE
Subjt:  RRTVETGQGEDFFISSDDGLMFE

KAA0045309.1 pol protein [Cucumis melo var. makuwa]0.0e+0096.47Show/hide
Query:  MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAGMVCIPKVISAMKASKLRSQGTWGILASVVDIREPEVSLSSEPVVREY
        MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAGMVCIPKVISAMKASKL SQGTWGILASVVDIREPEVSLSSEPVVREY
Subjt:  MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAGMVCIPKVISAMKASKLRSQGTWGILASVVDIREPEVSLSSEPVVREY

Query:  PDVFPDELPGLPPPREVDFTIELEPGTAHISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNCYPLP
        PDVFPDELPGLPPP+EVDF IELEPGTA ISRAPY+MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKN YPLP
Subjt:  PDVFPDELPGLPPPREVDFTIELEPGTAHISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNCYPLP

Query:  RIDDLFDQLQGATVFSKIDLRSGYHQLGIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDLFVIVFIDDILIYSKTEAEHEEHLH
        RIDDLFDQLQGATVFSKIDLRSGYHQL IRDGDIPKTAFRSRYGHYEFVV+SFGLTNAPAVFMDLMNRVFKDFLD FVIVFIDDILIYSKTEAEHEEHLH
Subjt:  RIDDLFDQLQGATVFSKIDLRSGYHQLGIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDLFVIVFIDDILIYSKTEAEHEEHLH

Query:  QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRSSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPTCE
        QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPR STVSEIRSFLGLAGYYRRFVED SRIASPLTQLTRKGTPFVWSP CE
Subjt:  QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRSSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPTCE

Query:  SSFQELKQKLVTAPVLTVLDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKTHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFF
         SFQELKQKLVTAPVLTV DGSG+FVIYSDASKKGLGCVLMQQGKVVAYASRQLK HEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFF
Subjt:  SSFQELKQKLVTAPVLTVLDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKTHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFF

Query:  TQRELNMRQRRWLELVKDYDCEILYHPGKPNVVADVLSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLVEK
        TQ+ELNMRQRRWLELVKDYDCEILYHPGK NVVAD LSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYL EK
Subjt:  TQRELNMRQRRWLELVKDYDCEILYHPGKPNVVADVLSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLVEK

Query:  RRTVETGQGEDFFISSDDGLMFE
        RR VETGQGEDF ISSDDGLMFE
Subjt:  RRTVETGQGEDFFISSDDGLMFE

KAA0058812.1 pol protein [Cucumis melo var. makuwa]0.0e+0096.31Show/hide
Query:  MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAGMVCIPKVISAMKASKLRSQGTWGILASVVDIREPEVSLSSEPVVREY
        MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAG+VCIPKVISAMKASKL SQGTWGILASVVDIREPEVSLSSEPVVREY
Subjt:  MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAGMVCIPKVISAMKASKLRSQGTWGILASVVDIREPEVSLSSEPVVREY

Query:  PDVFPDELPGLPPPREVDFTIELEPGTAHISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNCYPLP
        PDVFPDELPGLPPPREVDF IELEPGTA ISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVT+KN YPLP
Subjt:  PDVFPDELPGLPPPREVDFTIELEPGTAHISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNCYPLP

Query:  RIDDLFDQLQGATVFSKIDLRSGYHQLGIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDLFVIVFIDDILIYSKTEAEHEEHLH
        RIDDLFDQLQGATVFSKIDLRSGYHQL IRDGDIPKTAF SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDF+D FVIVFIDDILIYSKTEAEHEEHLH
Subjt:  RIDDLFDQLQGATVFSKIDLRSGYHQLGIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDLFVIVFIDDILIYSKTEAEHEEHLH

Query:  QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRSSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPTCE
        QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPR STVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSP CE
Subjt:  QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRSSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPTCE

Query:  SSFQELKQKLVTAPVLTVLDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKTHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFF
        SSFQELKQKLVTAPVLTV DGSG+FVIYSDASKKGLGCVLMQQGKVVAYASRQLK HEQNYPTHDLELA VVFALKIWRHYLYGEKIQIYTDHKSLKYFF
Subjt:  SSFQELKQKLVTAPVLTVLDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKTHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFF

Query:  TQRELNMRQRRWLELVKDYDCEILYHPGKPNVVADVLSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLVEK
        TQ+ELNMRQRRWLELVKDYD EILYHPGK NVVAD LSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYL EK
Subjt:  TQRELNMRQRRWLELVKDYDCEILYHPGKPNVVADVLSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLVEK

Query:  RRTVETGQGEDFFISSDDGLMFE
        RR VETGQGEDF ISSDDGLMFE
Subjt:  RRTVETGQGEDFFISSDDGLMFE

KAA0060745.1 pol protein [Cucumis melo var. makuwa]0.0e+0096.79Show/hide
Query:  MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAGMVCIPKVISAMKASKLRSQGTWGILASVVDIREPEVSLSSEPVVREY
        MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAGMVCIPKVISAMKASKL SQGTWGILASVVDIREPEVSLSSEPVVREY
Subjt:  MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAGMVCIPKVISAMKASKLRSQGTWGILASVVDIREPEVSLSSEPVVREY

Query:  PDVFPDELPGLPPPREVDFTIELEPGTAHISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNCYPLP
        PDVFPDELPGLPPPREVDF IELEPGTA ISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKN YPLP
Subjt:  PDVFPDELPGLPPPREVDFTIELEPGTAHISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNCYPLP

Query:  RIDDLFDQLQGATVFSKIDLRSGYHQLGIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDLFVIVFIDDILIYSKTEAEHEEHLH
        +IDDLFDQLQGATVFSKIDLRSGYHQL IRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLD FVIVFIDDILIYSKTEAEHEEHLH
Subjt:  RIDDLFDQLQGATVFSKIDLRSGYHQLGIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDLFVIVFIDDILIYSKTEAEHEEHLH

Query:  QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRSSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPTCE
        QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPR STVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSP CE
Subjt:  QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRSSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPTCE

Query:  SSFQELKQKLVTAPVLTVLDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKTHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFF
        SSFQELKQKLV APVLTV DGSG+FVIYSDASKKGLGCVLMQQGKVVAYASRQLK HEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFF
Subjt:  SSFQELKQKLVTAPVLTVLDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKTHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFF

Query:  TQRELNMRQRRWLELVKDYDCEILYHPGKPNVVADVLSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLVEK
        TQ+ELNMRQRRWLELVKDYDCEILYHPGK NVVAD LSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYL EK
Subjt:  TQRELNMRQRRWLELVKDYDCEILYHPGKPNVVADVLSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLVEK

Query:  RRTVETGQGEDFFISSDDGLMFE
        RR VETGQGEDF IS DDGLMFE
Subjt:  RRTVETGQGEDFFISSDDGLMFE

TrEMBL top hitse value%identityAlignment
A0A5A7SSL3 Reverse transcriptase0.0e+0096.31Show/hide
Query:  MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAGMVCIPKVISAMKASKLRSQGTWGILASVVDIREPEVSLSSEPVVREY
        MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEV+FNPPSGASFKFRGAGMVCIPKVISAMKASKL SQGTWGILASVVDIREPEVSLSSEPVVREY
Subjt:  MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAGMVCIPKVISAMKASKLRSQGTWGILASVVDIREPEVSLSSEPVVREY

Query:  PDVFPDELPGLPPPREVDFTIELEPGTAHISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNCYPLP
        PDVFPDELPGLPPPREVDF IELEPGTA ISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKN YPLP
Subjt:  PDVFPDELPGLPPPREVDFTIELEPGTAHISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNCYPLP

Query:  RIDDLFDQLQGATVFSKIDLRSGYHQLGIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDLFVIVFIDDILIYSKTEAEHEEHLH
        RIDDLFDQLQGATVFSKIDLRSGYHQL IRDGDIPKTAFRSRYGHY+FVVMSFGLTNAPAVFMDLMNRVFKDFLD FVIVFIDDILIYSKTEAEHEEHLH
Subjt:  RIDDLFDQLQGATVFSKIDLRSGYHQLGIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDLFVIVFIDDILIYSKTEAEHEEHLH

Query:  QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRSSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPTCE
        QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPR STVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSP CE
Subjt:  QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRSSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPTCE

Query:  SSFQELKQKLVTAPVLTVLDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKTHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFF
         SFQELKQKLVTAPVLTV DGSG+FVIYSDASKKGLGCVLMQQGKVVAYASRQLK HEQNYPTHDLELAAVVFALKIWRHYLY EKIQIYTDHKSLKYFF
Subjt:  SSFQELKQKLVTAPVLTVLDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKTHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFF

Query:  TQRELNMRQRRWLELVKDYDCEILYHPGKPNVVADVLSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLVEK
        TQ+ELNMRQRRWLELVKDYDCEILYHPGK NVVAD LSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQ NDPYL EK
Subjt:  TQRELNMRQRRWLELVKDYDCEILYHPGKPNVVADVLSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLVEK

Query:  RRTVETGQGEDFFISSDDGLMFE
        RR VETGQGEDF IS+DDGLMFE
Subjt:  RRTVETGQGEDFFISSDDGLMFE

A0A5A7T7M0 Reverse transcriptase0.0e+0096.31Show/hide
Query:  MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAGMVCIPKVISAMKASKLRSQGTWGILASVVDIREPEVSLSSEPVVREY
        MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFRG G+VCIPKVISAMKASKL SQGTWGILASVVDIREPEVSLSSEPVVREY
Subjt:  MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAGMVCIPKVISAMKASKLRSQGTWGILASVVDIREPEVSLSSEPVVREY

Query:  PDVFPDELPGLPPPREVDFTIELEPGTAHISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNCYPLP
        PDVFPDELPGLPPPREVDF IELEPGTA ISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKN YPLP
Subjt:  PDVFPDELPGLPPPREVDFTIELEPGTAHISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNCYPLP

Query:  RIDDLFDQLQGATVFSKIDLRSGYHQLGIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDLFVIVFIDDILIYSKTEAEHEEHLH
        RIDDLFDQLQGATVFSKIDLRSGYHQL IRDGDIPKTAFRSRYGHYEFVVMSFGLT APAVFMDLMNR+FKDFLD FVIVFIDDILIYSKTEAEHEEHLH
Subjt:  RIDDLFDQLQGATVFSKIDLRSGYHQLGIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDLFVIVFIDDILIYSKTEAEHEEHLH

Query:  QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRSSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPTCE
        QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPR STVSEIRSFLGLAGYYRRFVEDFSRIA+PLTQLTRKG PFVWSP CE
Subjt:  QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRSSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPTCE

Query:  SSFQELKQKLVTAPVLTVLDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKTHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFF
        SSFQELKQKLVTAPVLTV DGSG+FVIYSDASKKGLGCVLMQQGKVVAYASRQLK HEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFF
Subjt:  SSFQELKQKLVTAPVLTVLDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKTHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFF

Query:  TQRELNMRQRRWLELVKDYDCEILYHPGKPNVVADVLSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLVEK
        TQ+ELNMRQRRWLELVKDYDCEILYHPGK NVVAD LSRKVAHSAALITKQTPLL+DFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLVEK
Subjt:  TQRELNMRQRRWLELVKDYDCEILYHPGKPNVVADVLSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLVEK

Query:  RRTVETGQGEDFFISSDDGLMFE
        RR VETGQGEDF ISSDDGLMFE
Subjt:  RRTVETGQGEDFFISSDDGLMFE

A0A5A7TVN9 Reverse transcriptase0.0e+0096.47Show/hide
Query:  MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAGMVCIPKVISAMKASKLRSQGTWGILASVVDIREPEVSLSSEPVVREY
        MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAGMVCIPKVISAMKASKL SQGTWGILASVVDIREPEVSLSSEPVVREY
Subjt:  MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAGMVCIPKVISAMKASKLRSQGTWGILASVVDIREPEVSLSSEPVVREY

Query:  PDVFPDELPGLPPPREVDFTIELEPGTAHISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNCYPLP
        PDVFPDELPGLPPP+EVDF IELEPGTA ISRAPY+MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKN YPLP
Subjt:  PDVFPDELPGLPPPREVDFTIELEPGTAHISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNCYPLP

Query:  RIDDLFDQLQGATVFSKIDLRSGYHQLGIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDLFVIVFIDDILIYSKTEAEHEEHLH
        RIDDLFDQLQGATVFSKIDLRSGYHQL IRDGDIPKTAFRSRYGHYEFVV+SFGLTNAPAVFMDLMNRVFKDFLD FVIVFIDDILIYSKTEAEHEEHLH
Subjt:  RIDDLFDQLQGATVFSKIDLRSGYHQLGIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDLFVIVFIDDILIYSKTEAEHEEHLH

Query:  QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRSSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPTCE
        QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPR STVSEIRSFLGLAGYYRRFVED SRIASPLTQLTRKGTPFVWSP CE
Subjt:  QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRSSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPTCE

Query:  SSFQELKQKLVTAPVLTVLDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKTHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFF
         SFQELKQKLVTAPVLTV DGSG+FVIYSDASKKGLGCVLMQQGKVVAYASRQLK HEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFF
Subjt:  SSFQELKQKLVTAPVLTVLDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKTHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFF

Query:  TQRELNMRQRRWLELVKDYDCEILYHPGKPNVVADVLSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLVEK
        TQ+ELNMRQRRWLELVKDYDCEILYHPGK NVVAD LSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYL EK
Subjt:  TQRELNMRQRRWLELVKDYDCEILYHPGKPNVVADVLSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLVEK

Query:  RRTVETGQGEDFFISSDDGLMFE
        RR VETGQGEDF ISSDDGLMFE
Subjt:  RRTVETGQGEDFFISSDDGLMFE

A0A5A7USG7 Reverse transcriptase0.0e+0096.31Show/hide
Query:  MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAGMVCIPKVISAMKASKLRSQGTWGILASVVDIREPEVSLSSEPVVREY
        MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAG+VCIPKVISAMKASKL SQGTWGILASVVDIREPEVSLSSEPVVREY
Subjt:  MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAGMVCIPKVISAMKASKLRSQGTWGILASVVDIREPEVSLSSEPVVREY

Query:  PDVFPDELPGLPPPREVDFTIELEPGTAHISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNCYPLP
        PDVFPDELPGLPPPREVDF IELEPGTA ISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVT+KN YPLP
Subjt:  PDVFPDELPGLPPPREVDFTIELEPGTAHISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNCYPLP

Query:  RIDDLFDQLQGATVFSKIDLRSGYHQLGIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDLFVIVFIDDILIYSKTEAEHEEHLH
        RIDDLFDQLQGATVFSKIDLRSGYHQL IRDGDIPKTAF SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDF+D FVIVFIDDILIYSKTEAEHEEHLH
Subjt:  RIDDLFDQLQGATVFSKIDLRSGYHQLGIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDLFVIVFIDDILIYSKTEAEHEEHLH

Query:  QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRSSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPTCE
        QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPR STVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSP CE
Subjt:  QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRSSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPTCE

Query:  SSFQELKQKLVTAPVLTVLDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKTHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFF
        SSFQELKQKLVTAPVLTV DGSG+FVIYSDASKKGLGCVLMQQGKVVAYASRQLK HEQNYPTHDLELA VVFALKIWRHYLYGEKIQIYTDHKSLKYFF
Subjt:  SSFQELKQKLVTAPVLTVLDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKTHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFF

Query:  TQRELNMRQRRWLELVKDYDCEILYHPGKPNVVADVLSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLVEK
        TQ+ELNMRQRRWLELVKDYD EILYHPGK NVVAD LSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYL EK
Subjt:  TQRELNMRQRRWLELVKDYDCEILYHPGKPNVVADVLSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLVEK

Query:  RRTVETGQGEDFFISSDDGLMFE
        RR VETGQGEDF ISSDDGLMFE
Subjt:  RRTVETGQGEDFFISSDDGLMFE

A0A5A7V4E4 Reverse transcriptase0.0e+0096.79Show/hide
Query:  MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAGMVCIPKVISAMKASKLRSQGTWGILASVVDIREPEVSLSSEPVVREY
        MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAGMVCIPKVISAMKASKL SQGTWGILASVVDIREPEVSLSSEPVVREY
Subjt:  MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAGMVCIPKVISAMKASKLRSQGTWGILASVVDIREPEVSLSSEPVVREY

Query:  PDVFPDELPGLPPPREVDFTIELEPGTAHISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNCYPLP
        PDVFPDELPGLPPPREVDF IELEPGTA ISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKN YPLP
Subjt:  PDVFPDELPGLPPPREVDFTIELEPGTAHISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNCYPLP

Query:  RIDDLFDQLQGATVFSKIDLRSGYHQLGIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDLFVIVFIDDILIYSKTEAEHEEHLH
        +IDDLFDQLQGATVFSKIDLRSGYHQL IRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLD FVIVFIDDILIYSKTEAEHEEHLH
Subjt:  RIDDLFDQLQGATVFSKIDLRSGYHQLGIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDLFVIVFIDDILIYSKTEAEHEEHLH

Query:  QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRSSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPTCE
        QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPR STVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSP CE
Subjt:  QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRSSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPTCE

Query:  SSFQELKQKLVTAPVLTVLDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKTHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFF
        SSFQELKQKLV APVLTV DGSG+FVIYSDASKKGLGCVLMQQGKVVAYASRQLK HEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFF
Subjt:  SSFQELKQKLVTAPVLTVLDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKTHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFF

Query:  TQRELNMRQRRWLELVKDYDCEILYHPGKPNVVADVLSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLVEK
        TQ+ELNMRQRRWLELVKDYDCEILYHPGK NVVAD LSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYL EK
Subjt:  TQRELNMRQRRWLELVKDYDCEILYHPGKPNVVADVLSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLVEK

Query:  RRTVETGQGEDFFISSDDGLMFE
        RR VETGQGEDF IS DDGLMFE
Subjt:  RRTVETGQGEDFFISSDDGLMFE

SwissProt top hitse value%identityAlignment
P04323 Retrovirus-related Pol polyprotein from transposon 17.65.6e-8637.56Show/hide
Query:  VVREYPDVFPDELPGLPPPREVDFTIELEPGTAHISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFV-KKKDGS----MRLCIDYRELNK
        ++++Y D+   E   L    +   TI  +      S+  Y  A  +  E++ Q+Q++L++G IR S SP+ +P+  V KK+D S     R+ IDYR+LN+
Subjt:  VVREYPDVFPDELPGLPPPREVDFTIELEPGTAHISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFV-KKKDGS----MRLCIDYRELNK

Query:  VTVKNCYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLGIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDLFVIVFIDDILIYSK
        +TV + +P+P +D++  +L     F+ IDL  G+HQ+ +    + KTAF +++GHYE++ M FGL NAPA F   MN + +  L+   +V++DDI+++S 
Subjt:  VTVKNCYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLGIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDLFVIVFIDDILIYSK

Query:  TEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRSSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKG
        +  EH + L  V E L    L  +  KCEF  ++ TFLGHV++ +G+  +P KIEA+  +P  +   EI++FLGL GYYR+F+ +F+ IA P+T+  +K 
Subjt:  TEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRSSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKG

Query:  TPF-VWSPTCESSFQELKQKLVTAPVLTVLDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKTHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQI
              +P  +S+F++LK  +   P+L V D +  F + +DAS   LG VL Q G  ++Y SR L  HE NY T + EL A+V+A K +RHYL G   +I
Subjt:  TPF-VWSPTCESSFQELKQKLVTAPVLTVLDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKTHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQI

Query:  YTDHKSLKYFFTQRELNMRQRRWLELVKDYDCEILYHPGKPNVVADVLSR
         +DH+ L + +  ++ N +  RW   + ++D +I Y  GK N VAD LSR
Subjt:  YTDHKSLKYFFTQRELNMRQRRWLELVKDYDCEILYHPGKPNVVADVLSR

P20825 Retrovirus-related Pol polyprotein from transposon 2971.4e-8137.71Show/hide
Query:  YRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD-----GSMRLCIDYRELNKVTVKNCYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLGI
        Y +A     E++ Q+QE+L++G IR S SP+ +P   V KK         R+ IDYR+LN++T+ + YP+P +D++  +L     F+ IDL  G+HQ+ +
Subjt:  YRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD-----GSMRLCIDYRELNKVTVKNCYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLGI

Query:  RDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDLFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLG
         +  I KTAF ++ GHYE++ M FGL NAPA F   MN + +  L+   +V++DDI+I+S +  EH   +  V   L    L  +  KCEF  ++  FLG
Subjt:  RDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDLFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLG

Query:  HVVSSEGVSVDPAKIEAVTNWPRSSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPF-VWSPTCESSFQELKQKLVTAPVLTVLDGSGSFVIY
        H+V+ +G+  +P K++A+ ++P  +   EIR+FLGL GYYR+F+ +++ IA P+T   +K T           +F++LK  ++  P+L + D    FV+ 
Subjt:  HVVSSEGVSVDPAKIEAVTNWPRSSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPF-VWSPTCESSFQELKQKLVTAPVLTVLDGSGSFVIY

Query:  SDASKKGLGCVLMQQGKVVAYASRQLKTHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQRELNMRQRRWLELVKDYDCEILYHPG
        +DAS   LG VL Q G  +++ SR L  HE NY   + EL A+V+A K +RHYL G +  I +DH+ L++    +E   +  RW   + +Y  +I Y  G
Subjt:  SDASKKGLGCVLMQQGKVVAYASRQLKTHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQRELNMRQRRWLELVKDYDCEILYHPG

Query:  KPNVVADVLSR
        K N VAD LSR
Subjt:  KPNVVADVLSR

Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein4.4e-8335.61Show/hide
Query:  KASKLRSQGTWGILASVVDIREPEVSLSSEP---------VVREYPDVFPDELPGLPPPREVD-----FTIELEPGTAHISRAPYRMAPAELKELKVQLQ
        +AS L   G +  + S +   EP  +  S           + ++Y ++  ++LP  P P +++       IE++PG       PY +     +E+   +Q
Subjt:  KASKLRSQGTWGILASVVDIREPEVSLSSEP---------VVREYPDVFPDELPGLPPPREVD-----FTIELEPGTAHISRAPYRMAPAELKELKVQLQ

Query:  ELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNCYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLGIRDGDIPKTAFRSRYGHYEFVV
        +LLD  FI PS SP  +PV+ V KKDG+ RLC+DYR LNK T+ + +PLPRID+L  ++  A +F+ +DL SGYHQ+ +   D  KTAF +  G YE+ V
Subjt:  ELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNCYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLGIRDGDIPKTAFRSRYGHYEFVV

Query:  MSFGLTNAPAVFMDLMNRVFKDFLDLFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
        M FGL NAP+ F   M   F+D    FV V++DDILI+S++  EH +HL  VLE L+   L  K  KC+F   +  FLG+ +  + ++    K  A+ ++
Subjt:  MSFGLTNAPAVFMDLMNRVFKDFLDLFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW

Query:  PRSSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPTCESSFQELKQKLVTAPVLTVLDGSGSFVIYSDASKKGLGCVLMQQGK-----
        P   TV + + FLG+  YYRRF+ + S+IA P+       +   W+   + + ++LK  L  +PVL   +   ++ + +DASK G+G VL +        
Subjt:  PRSSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPTCESSFQELKQKLVTAPVLTVLDGSGSFVIYSDASKKGLGCVLMQQGK-----

Query:  -VVAYASRQLKTHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQRELNMRQRRWLELVKDYDCEILYHPGKPNVVADVLSRKV
         VV Y S+ L++ ++NYP  +LEL  ++ AL  +R+ L+G+   + TDH SL     + E   R +RWL+ +  YD  + Y  G  NVVAD +SR +
Subjt:  -VVAYASRQLKTHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQRELNMRQRRWLELVKDYDCEILYHPGKPNVVADVLSRKV

Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus1.2e-8332.86Show/hide
Query:  DVTLLVL-DMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAGMVCIPKVISAMKASKLRSQGTWGILASVVDIREPEVSLSSEPVVREYP
        D+T  VL ++  FD I+G D L    A +D     ++  P  G          + +  +++A         GT  IL S++                E+P
Subjt:  DVTLLVL-DMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAGMVCIPKVISAMKASKLRSQGTWGILASVVDIREPEVSLSSEPVVREYP

Query:  DVFPDELPGLPPPREVDFTIELEPGTAHISRAPYRMAPAELK-ELKVQLQELLDKGFIRPSVSPWGAPVLFVKKK-----DGSMRLCIDYRELNKVTVKN
         +F   L G+    E     E+   T     A     P  ++ E++ Q+ ELL  G IRPS SP+ +P+  V KK     +   R+ +D++ LN VT+ +
Subjt:  DVFPDELPGLPPPREVDFTIELEPGTAHISRAPYRMAPAELK-ELKVQLQELLDKGFIRPSVSPWGAPVLFVKKK-----DGSMRLCIDYRELNKVTVKN

Query:  CYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLGIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDLFVIVFIDDILIYSKTEAEH
         YP+P I+     L  A  F+ +DL SG+HQ+ +++ DIPKTAF +  G YEF+ + FGL NAPA+F  +++ + ++ +     V+IDDI+++S+    H
Subjt:  CYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLGIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDLFVIVFIDDILIYSKTEAEH

Query:  EEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRSSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTR-------
         ++L  VL +L    L     K  F   +V FLG++V+++G+  DP K+ A++  P  ++V E++ FLG+  YYR+F++D++++A PLT LTR       
Subjt:  EEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRSSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTR-------

Query:  ----KGTPFVWSPTCESSFQELKQKLVTAPVLTVLDGSGSFVIYSDASKKGLGCVLMQ----QGKVVAYASRQLKTHEQNYPTHDLELAAVVFALKIWRH
               P     T   SF +LK  L ++ +L     +  F + +DAS   +G VL Q    + + +AY SR L   E+NY T + E+ A++++L   R 
Subjt:  ----KGTPFVWSPTCESSFQELKQKLVTAPVLTVLDGSGSFVIYSDASKKGLGCVLMQ----QGKVVAYASRQLKTHEQNYPTHDLELAAVVFALKIWRH

Query:  YLYGE-KIQIYTDHKSLKYFFTQRELNMRQRRWLELVKDYDCEILYHPGKPNVVADVLSR
        YLYG   I++YTDH+ L +    R  N + +RW   +++Y+CE++Y PGK NVVAD LSR
Subjt:  YLYGE-KIQIYTDHKSLKYFFTQRELNMRQRRWLELVKDYDCEILYHPGKPNVVADVLSR

Q99315 Transposon Ty3-G Gag-Pol polyprotein4.4e-8335.81Show/hide
Query:  KASKLRSQGTWGILASVVDIREPEVSLSSEP---------VVREYPDVFPDELPGLPPPREVD-----FTIELEPGTAHISRAPYRMAPAELKELKVQLQ
        +AS L   G +  + S +   EP  +  S           + ++Y ++  ++LP  P P +++       IE++PG       PY +     +E+   +Q
Subjt:  KASKLRSQGTWGILASVVDIREPEVSLSSEP---------VVREYPDVFPDELPGLPPPREVD-----FTIELEPGTAHISRAPYRMAPAELKELKVQLQ

Query:  ELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNCYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLGIRDGDIPKTAFRSRYGHYEFVV
        +LLD  FI PS SP  +PV+ V KKDG+ RLC+DYR LNK T+ + +PLPRID+L  ++  A +F+ +DL SGYHQ+ +   D  KTAF +  G YE+ V
Subjt:  ELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNCYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLGIRDGDIPKTAFRSRYGHYEFVV

Query:  MSFGLTNAPAVFMDLMNRVFKDFLDLFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
        M FGL NAP+ F   M   F+D    FV V++DDILI+S++  EH +HL  VLE L+   L  K  KC+F   +  FLG+ +  + ++    K  A+ ++
Subjt:  MSFGLTNAPAVFMDLMNRVFKDFLDLFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW

Query:  PRSSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPTCESSFQELKQKLVTAPVLTVLDGSGSFVIYSDASKKGLGCVLMQQGK-----
        P   TV + + FLG+  YYRRF+ + S+IA P+       +   W+   + +  +LK  L  +PVL   +   ++ + +DASK G+G VL +        
Subjt:  PRSSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPTCESSFQELKQKLVTAPVLTVLDGSGSFVIYSDASKKGLGCVLMQQGK-----

Query:  -VVAYASRQLKTHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQRELNMRQRRWLELVKDYDCEILYHPGKPNVVADVLSRKV
         VV Y S+ L++ ++NYP  +LEL  ++ AL  +R+ L+G+   + TDH SL     + E   R +RWL+ +  YD  + Y  G  NVVAD +SR V
Subjt:  -VVAYASRQLKTHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQRELNMRQRRWLELVKDYDCEILYHPGKPNVVADVLSRKV

Arabidopsis top hitse value%identityAlignment
ATMG00860.1 DNA/RNA polymerases superfamily protein2.1e-2441.98Show/hide
Query:  HLHQVLETLRANKLYAKFSKCEFWLRKVTFLG--HVVSSEGVSVDPAKIEAVTNWPRSSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVW
        HL  VL+    ++ YA   KC F   ++ +LG  H++S EGVS DPAK+EA+  WP     +E+R FLGL GYYRRFV+++ +I  PLT+L +K +   W
Subjt:  HLHQVLETLRANKLYAKFSKCEFWLRKVTFLG--HVVSSEGVSVDPAKIEAVTNWPRSSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVW

Query:  SPTCESSFQELKQKLVTAPVLTVLDGSGSFV
        +     +F+ LK  + T PVL + D    FV
Subjt:  SPTCESSFQELKQKLVTAPVLTVLDGSGSFV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAGACGTGACCTTACTAGTGTTAGACATGCAGGATTTTGACGTGATACTAGGCATGGATTGGCTGTCAGCCAACCATGCAAATATAGACTGTTTTGGCAAGGAAGT
TGTCTTTAACCCTCCCTCTGGAGCTAGTTTCAAATTTAGGGGGGCAGGCATGGTATGTATACCCAAGGTCATCTCAGCCATGAAGGCTAGTAAACTACGCAGTCAAGGTA
CTTGGGGCATCTTGGCAAGCGTAGTGGATATTAGAGAGCCAGAAGTTTCCCTATCTTCCGAACCAGTGGTAAGGGAGTACCCTGACGTTTTCCCTGACGAACTCCCAGGA
CTTCCGCCTCCTAGGGAGGTAGACTTCACCATTGAGTTAGAGCCGGGCACTGCCCATATCTCAAGGGCCCCTTACAGAATGGCTCCAGCCGAGCTAAAAGAGCTGAAGGT
CCAGTTACAGGAGTTGCTGGACAAAGGTTTCATCCGGCCCAGTGTGTCACCTTGGGGAGCCCCAGTGTTGTTCGTGAAGAAGAAGGATGGATCGATGCGCCTTTGTATTG
ACTACCGAGAGCTGAATAAGGTGACAGTTAAAAACTGCTACCCCTTGCCCAGGATTGATGACTTGTTCGATCAGTTGCAGGGAGCCACTGTCTTTTCCAAGATCGACCTA
CGGTCAGGCTATCACCAGTTGGGGATTAGGGACGGTGACATTCCCAAGACGGCCTTTCGTTCGAGGTACGGACATTACGAGTTCGTTGTGATGTCTTTCGGCTTGACTAA
CGCTCCTGCAGTGTTCATGGATTTGATGAACAGGGTGTTTAAGGATTTTCTAGACTTGTTCGTCATAGTCTTCATTGATGACATCTTGATTTACTCAAAAACTGAGGCTG
AGCACGAGGAGCACTTGCACCAGGTCTTGGAGACTCTTCGAGCCAACAAGTTGTATGCCAAGTTCTCCAAGTGTGAATTCTGGCTAAGGAAGGTGACGTTTCTTGGCCAC
GTGGTTTCTAGTGAGGGAGTTTCAGTGGATCCAGCAAAGATTGAAGCGGTGACCAACTGGCCTCGATCGTCCACAGTTAGTGAAATTCGAAGTTTTCTGGGCTTGGCAGG
TTACTACAGGAGGTTCGTGGAAGACTTCTCACGTATAGCCAGCCCGTTAACCCAGTTGACCAGGAAGGGAACCCCTTTTGTCTGGAGCCCAACATGCGAGAGTAGCTTTC
AGGAGCTCAAGCAGAAGCTGGTGACTGCACCAGTCCTGACAGTGCTCGATGGGTCGGGAAGCTTTGTGATCTATAGTGATGCCTCCAAGAAGGGACTGGGCTGTGTCCTG
ATGCAGCAAGGTAAGGTAGTTGCTTATGCCTCCCGCCAGTTGAAGACTCATGAGCAGAACTACCCTACCCACGACTTGGAGTTGGCAGCTGTAGTCTTTGCACTGAAGAT
ATGGAGGCACTACCTGTATGGTGAGAAGATACAGATTTACACTGACCATAAGAGCCTGAAGTACTTCTTCACTCAGAGGGAGTTGAACATGAGGCAGAGGAGGTGGCTCG
AGTTGGTGAAAGACTATGACTGCGAGATCCTGTACCACCCAGGTAAACCAAATGTAGTGGCTGACGTGCTGAGTAGGAAGGTTGCACATTCAGCAGCGCTAATCACCAAG
CAGACCCCCTTACTCAGGGATTTTGAGAGAGCCGAGATTGCAGTCTCAGTAGGTGAGGTTACCGCACAGTTGGCTCAGTTGTCAGTTCAGCCAACCCTGAGGCAAAAGAT
CATCGCTGCTCAGCTGAATGATCCTTACTTGGTCGAGAAGCGTCGTACGGTAGAGACAGGGCAAGGTGAGGACTTCTTCATATCCTCTGACGATGGCCTTATGTTTGAGT
GA
mRNA sequenceShow/hide mRNA sequence
ATGTTAGACGTGACCTTACTAGTGTTAGACATGCAGGATTTTGACGTGATACTAGGCATGGATTGGCTGTCAGCCAACCATGCAAATATAGACTGTTTTGGCAAGGAAGT
TGTCTTTAACCCTCCCTCTGGAGCTAGTTTCAAATTTAGGGGGGCAGGCATGGTATGTATACCCAAGGTCATCTCAGCCATGAAGGCTAGTAAACTACGCAGTCAAGGTA
CTTGGGGCATCTTGGCAAGCGTAGTGGATATTAGAGAGCCAGAAGTTTCCCTATCTTCCGAACCAGTGGTAAGGGAGTACCCTGACGTTTTCCCTGACGAACTCCCAGGA
CTTCCGCCTCCTAGGGAGGTAGACTTCACCATTGAGTTAGAGCCGGGCACTGCCCATATCTCAAGGGCCCCTTACAGAATGGCTCCAGCCGAGCTAAAAGAGCTGAAGGT
CCAGTTACAGGAGTTGCTGGACAAAGGTTTCATCCGGCCCAGTGTGTCACCTTGGGGAGCCCCAGTGTTGTTCGTGAAGAAGAAGGATGGATCGATGCGCCTTTGTATTG
ACTACCGAGAGCTGAATAAGGTGACAGTTAAAAACTGCTACCCCTTGCCCAGGATTGATGACTTGTTCGATCAGTTGCAGGGAGCCACTGTCTTTTCCAAGATCGACCTA
CGGTCAGGCTATCACCAGTTGGGGATTAGGGACGGTGACATTCCCAAGACGGCCTTTCGTTCGAGGTACGGACATTACGAGTTCGTTGTGATGTCTTTCGGCTTGACTAA
CGCTCCTGCAGTGTTCATGGATTTGATGAACAGGGTGTTTAAGGATTTTCTAGACTTGTTCGTCATAGTCTTCATTGATGACATCTTGATTTACTCAAAAACTGAGGCTG
AGCACGAGGAGCACTTGCACCAGGTCTTGGAGACTCTTCGAGCCAACAAGTTGTATGCCAAGTTCTCCAAGTGTGAATTCTGGCTAAGGAAGGTGACGTTTCTTGGCCAC
GTGGTTTCTAGTGAGGGAGTTTCAGTGGATCCAGCAAAGATTGAAGCGGTGACCAACTGGCCTCGATCGTCCACAGTTAGTGAAATTCGAAGTTTTCTGGGCTTGGCAGG
TTACTACAGGAGGTTCGTGGAAGACTTCTCACGTATAGCCAGCCCGTTAACCCAGTTGACCAGGAAGGGAACCCCTTTTGTCTGGAGCCCAACATGCGAGAGTAGCTTTC
AGGAGCTCAAGCAGAAGCTGGTGACTGCACCAGTCCTGACAGTGCTCGATGGGTCGGGAAGCTTTGTGATCTATAGTGATGCCTCCAAGAAGGGACTGGGCTGTGTCCTG
ATGCAGCAAGGTAAGGTAGTTGCTTATGCCTCCCGCCAGTTGAAGACTCATGAGCAGAACTACCCTACCCACGACTTGGAGTTGGCAGCTGTAGTCTTTGCACTGAAGAT
ATGGAGGCACTACCTGTATGGTGAGAAGATACAGATTTACACTGACCATAAGAGCCTGAAGTACTTCTTCACTCAGAGGGAGTTGAACATGAGGCAGAGGAGGTGGCTCG
AGTTGGTGAAAGACTATGACTGCGAGATCCTGTACCACCCAGGTAAACCAAATGTAGTGGCTGACGTGCTGAGTAGGAAGGTTGCACATTCAGCAGCGCTAATCACCAAG
CAGACCCCCTTACTCAGGGATTTTGAGAGAGCCGAGATTGCAGTCTCAGTAGGTGAGGTTACCGCACAGTTGGCTCAGTTGTCAGTTCAGCCAACCCTGAGGCAAAAGAT
CATCGCTGCTCAGCTGAATGATCCTTACTTGGTCGAGAAGCGTCGTACGGTAGAGACAGGGCAAGGTGAGGACTTCTTCATATCCTCTGACGATGGCCTTATGTTTGAGT
GA
Protein sequenceShow/hide protein sequence
MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAGMVCIPKVISAMKASKLRSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPG
LPPPREVDFTIELEPGTAHISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNCYPLPRIDDLFDQLQGATVFSKIDL
RSGYHQLGIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDLFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGH
VVSSEGVSVDPAKIEAVTNWPRSSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPTCESSFQELKQKLVTAPVLTVLDGSGSFVIYSDASKKGLGCVL
MQQGKVVAYASRQLKTHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQRELNMRQRRWLELVKDYDCEILYHPGKPNVVADVLSRKVAHSAALITK
QTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLVEKRRTVETGQGEDFFISSDDGLMFE