| GenBank top hits | e value | %identity | Alignment |
|---|
| ADJ18449.1 gag/pol protein, partial [Bryonia dioica] | 1.5e-96 | 82.55 | Show/hide |
Query: MDLEMESIYFNSAWTLIDQPNDVKPFSCKWIYKRKRDKVGNVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSITTFYDYEIWQKDVKTAFLN
M+LEMES+YFNS WTL+D P+DVKP CKWIYKRKRD+ G VQTFKARLVAKGYTQ+EGVDYEETFSPVAMLKSIRILLSI TFY+YEIWQ DVKTAFLN
Subjt: MDLEMESIYFNSAWTLIDQPNDVKPFSCKWIYKRKRDKVGNVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSITTFYDYEIWQKDVKTAFLN
Query: ANFEESIYMAQPEGFIEKGQEQKVCKLQKSIYGLKKACRSSNIRFDTTIKSYDFEQNVDKHCVHKKVVNSIVAFLVLYVDDILLIGNDVGYLTDIKKWLT
N EESIYM QPEGFI + QEQKVCKLQKSIYGLK+A RS NIRFDT IKSY FEQNVD+ CV+KK+VNS+VAFL+LYVDDILLIGNDV YLTD+KKWL
Subjt: ANFEESIYMAQPEGFIEKGQEQKVCKLQKSIYGLKKACRSSNIRFDTTIKSYDFEQNVDKHCVHKKVVNSIVAFLVLYVDDILLIGNDVGYLTDIKKWLT
Query: TQFQMKDLRDAQ
TQFQMKDL +AQ
Subjt: TQFQMKDLRDAQ
|
|
| KAA0025945.1 gag/pol protein [Cucumis melo var. makuwa] | 1.3e-92 | 80.19 | Show/hide |
Query: MDLEMESIYFNSAWTLIDQPNDVKPFSCKWIYKRKRDKVGNVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSITTFYDYEIWQKDVKTAFLN
MDLEMES+YFNS W L+D P VKP CKWIYKRKRD G VQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSI TFYDYEIWQ DVKTAFLN
Subjt: MDLEMESIYFNSAWTLIDQPNDVKPFSCKWIYKRKRDKVGNVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSITTFYDYEIWQKDVKTAFLN
Query: ANFEESIYMAQPEGFIEKGQEQKVCKLQKSIYGLKKACRSSNIRFDTTIKSYDFEQNVDKHCVHKKVVNSIVAFLVLYVDDILLIGNDVGYLTDIKKWLT
N EESI+M+QPEGFI +GQEQKVCKL +SIYGLK+A RS NIRFDT IKSY F+QNVD+ CV+KK+ VAFLVLYVDDILLIGNDVGYLTD+K WL
Subjt: ANFEESIYMAQPEGFIEKGQEQKVCKLQKSIYGLKKACRSSNIRFDTTIKSYDFEQNVDKHCVHKKVVNSIVAFLVLYVDDILLIGNDVGYLTDIKKWLT
Query: TQFQMKDLRDAQ
QFQMKDL +AQ
Subjt: TQFQMKDLRDAQ
|
|
| KAA0045356.1 gag/pol protein [Cucumis melo var. makuwa] | 4.1e-94 | 79.25 | Show/hide |
Query: MDLEMESIYFNSAWTLIDQPNDVKPFSCKWIYKRKRDKVGNVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSITTFYDYEIWQKDVKTAFLN
MDL+MES+Y NS WTL+DQPN+++P CKWIYKRKRD+ VQTF+ARLVAKGYTQ+EG+DYEETFSP+AM+KSIRILLSI TFYDYEIWQ DVKTAFLN
Subjt: MDLEMESIYFNSAWTLIDQPNDVKPFSCKWIYKRKRDKVGNVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSITTFYDYEIWQKDVKTAFLN
Query: ANFEESIYMAQPEGFIEKGQEQKVCKLQKSIYGLKKACRSSNIRFDTTIKSYDFEQNVDKHCVHKKVVNSIVAFLVLYVDDILLIGNDVGYLTDIKKWLT
N EESIYM QPEGFI+KGQEQKVCKLQKSIYGLK+A RS NIRFDT IKSY FEQNVD+ CV+K+++NS VAFLVLYVDDILLIGN+V +LTDIK+WL
Subjt: ANFEESIYMAQPEGFIEKGQEQKVCKLQKSIYGLKKACRSSNIRFDTTIKSYDFEQNVDKHCVHKKVVNSIVAFLVLYVDDILLIGNDVGYLTDIKKWLT
Query: TQFQMKDLRDAQ
TQFQMKDL AQ
Subjt: TQFQMKDLRDAQ
|
|
| TYK03644.1 gag/pol protein [Cucumis melo var. makuwa] | 1.3e-92 | 80.19 | Show/hide |
Query: MDLEMESIYFNSAWTLIDQPNDVKPFSCKWIYKRKRDKVGNVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSITTFYDYEIWQKDVKTAFLN
MDLEMES+Y NS WTL+DQPNDVKP CKWIYKRKRD+ G VQTFKARLVAKGYTQ+EG+DYEE FS AM+KSIRILLSI TFYDYEIWQ DVKT FLN
Subjt: MDLEMESIYFNSAWTLIDQPNDVKPFSCKWIYKRKRDKVGNVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSITTFYDYEIWQKDVKTAFLN
Query: ANFEESIYMAQPEGFIEKGQEQKVCKLQKSIYGLKKACRSSNIRFDTTIKSYDFEQNVDKHCVHKKVVNSIVAFLVLYVDDILLIGNDVGYLTDIKKWLT
AN EESIYM QPE FI+KGQEQK+CKLQKSIYGLK+A RS NIRFDT IKSY EQNVD+ CV+K+++NS VAFLVLYVDDILLIGNDVG+L DIKKWL
Subjt: ANFEESIYMAQPEGFIEKGQEQKVCKLQKSIYGLKKACRSSNIRFDTTIKSYDFEQNVDKHCVHKKVVNSIVAFLVLYVDDILLIGNDVGYLTDIKKWLT
Query: TQFQMKDLRDAQ
QFQMKDL +AQ
Subjt: TQFQMKDLRDAQ
|
|
| TYK15984.1 gag/pol protein [Cucumis melo var. makuwa] | 1.3e-92 | 80.19 | Show/hide |
Query: MDLEMESIYFNSAWTLIDQPNDVKPFSCKWIYKRKRDKVGNVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSITTFYDYEIWQKDVKTAFLN
MDLEMES+YFNS W L+D P VKP CKWIYKRKRD G VQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSI TFYDYEIWQ DVKTAFLN
Subjt: MDLEMESIYFNSAWTLIDQPNDVKPFSCKWIYKRKRDKVGNVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSITTFYDYEIWQKDVKTAFLN
Query: ANFEESIYMAQPEGFIEKGQEQKVCKLQKSIYGLKKACRSSNIRFDTTIKSYDFEQNVDKHCVHKKVVNSIVAFLVLYVDDILLIGNDVGYLTDIKKWLT
N EESI+M+QPEGFI +GQEQKVCKL +SIYGLK+A RS NIRFDT IKSY F+QNVD+ CV+KK+ VAFLVLYVDDILLIGNDVGYLTD+K WL
Subjt: ANFEESIYMAQPEGFIEKGQEQKVCKLQKSIYGLKKACRSSNIRFDTTIKSYDFEQNVDKHCVHKKVVNSIVAFLVLYVDDILLIGNDVGYLTDIKKWLT
Query: TQFQMKDLRDAQ
QFQMKDL +AQ
Subjt: TQFQMKDLRDAQ
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TTA2 Gag/pol protein | 2.0e-94 | 79.25 | Show/hide |
Query: MDLEMESIYFNSAWTLIDQPNDVKPFSCKWIYKRKRDKVGNVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSITTFYDYEIWQKDVKTAFLN
MDL+MES+Y NS WTL+DQPN+++P CKWIYKRKRD+ VQTF+ARLVAKGYTQ+EG+DYEETFSP+AM+KSIRILLSI TFYDYEIWQ DVKTAFLN
Subjt: MDLEMESIYFNSAWTLIDQPNDVKPFSCKWIYKRKRDKVGNVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSITTFYDYEIWQKDVKTAFLN
Query: ANFEESIYMAQPEGFIEKGQEQKVCKLQKSIYGLKKACRSSNIRFDTTIKSYDFEQNVDKHCVHKKVVNSIVAFLVLYVDDILLIGNDVGYLTDIKKWLT
N EESIYM QPEGFI+KGQEQKVCKLQKSIYGLK+A RS NIRFDT IKSY FEQNVD+ CV+K+++NS VAFLVLYVDDILLIGN+V +LTDIK+WL
Subjt: ANFEESIYMAQPEGFIEKGQEQKVCKLQKSIYGLKKACRSSNIRFDTTIKSYDFEQNVDKHCVHKKVVNSIVAFLVLYVDDILLIGNDVGYLTDIKKWLT
Query: TQFQMKDLRDAQ
TQFQMKDL AQ
Subjt: TQFQMKDLRDAQ
|
|
| A0A5A7TZD0 Gag/pol protein | 6.3e-93 | 80.19 | Show/hide |
Query: MDLEMESIYFNSAWTLIDQPNDVKPFSCKWIYKRKRDKVGNVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSITTFYDYEIWQKDVKTAFLN
MDLEMES+YFNS W L+D P VKP CKWIYKRKRD G VQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSI TFYDYEIWQ DVKTAFLN
Subjt: MDLEMESIYFNSAWTLIDQPNDVKPFSCKWIYKRKRDKVGNVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSITTFYDYEIWQKDVKTAFLN
Query: ANFEESIYMAQPEGFIEKGQEQKVCKLQKSIYGLKKACRSSNIRFDTTIKSYDFEQNVDKHCVHKKVVNSIVAFLVLYVDDILLIGNDVGYLTDIKKWLT
N EESI+M+QPEGFI +GQEQKVCKL +SIYGLK+A RS NIRFDT IKSY F+QNVD+ CV+KK+ VAFLVLYVDDILLIGNDVGYLTD+K WL
Subjt: ANFEESIYMAQPEGFIEKGQEQKVCKLQKSIYGLKKACRSSNIRFDTTIKSYDFEQNVDKHCVHKKVVNSIVAFLVLYVDDILLIGNDVGYLTDIKKWLT
Query: TQFQMKDLRDAQ
QFQMKDL +AQ
Subjt: TQFQMKDLRDAQ
|
|
| A0A5A7UYE8 Gag/pol protein | 6.3e-93 | 80.19 | Show/hide |
Query: MDLEMESIYFNSAWTLIDQPNDVKPFSCKWIYKRKRDKVGNVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSITTFYDYEIWQKDVKTAFLN
MDLEMES+YFNS W L+D P VKP CKWIYKRKRD G VQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSI TFYDYEIWQ DVKTAFLN
Subjt: MDLEMESIYFNSAWTLIDQPNDVKPFSCKWIYKRKRDKVGNVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSITTFYDYEIWQKDVKTAFLN
Query: ANFEESIYMAQPEGFIEKGQEQKVCKLQKSIYGLKKACRSSNIRFDTTIKSYDFEQNVDKHCVHKKVVNSIVAFLVLYVDDILLIGNDVGYLTDIKKWLT
N EESI+M+QPEGFI +GQEQKVCKL +SIYGLK+A RS NIRFDT IKSY F+QNVD+ CV+KK+ VAFLVLYVDDILLIGNDVGYLTD+K WL
Subjt: ANFEESIYMAQPEGFIEKGQEQKVCKLQKSIYGLKKACRSSNIRFDTTIKSYDFEQNVDKHCVHKKVVNSIVAFLVLYVDDILLIGNDVGYLTDIKKWLT
Query: TQFQMKDLRDAQ
QFQMKDL +AQ
Subjt: TQFQMKDLRDAQ
|
|
| A0A5D3CYF4 Gag/pol protein | 6.3e-93 | 80.19 | Show/hide |
Query: MDLEMESIYFNSAWTLIDQPNDVKPFSCKWIYKRKRDKVGNVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSITTFYDYEIWQKDVKTAFLN
MDLEMES+YFNS W L+D P VKP CKWIYKRKRD G VQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSI TFYDYEIWQ DVKTAFLN
Subjt: MDLEMESIYFNSAWTLIDQPNDVKPFSCKWIYKRKRDKVGNVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSITTFYDYEIWQKDVKTAFLN
Query: ANFEESIYMAQPEGFIEKGQEQKVCKLQKSIYGLKKACRSSNIRFDTTIKSYDFEQNVDKHCVHKKVVNSIVAFLVLYVDDILLIGNDVGYLTDIKKWLT
N EESI+M+QPEGFI +GQEQKVCKL +SIYGLK+A RS NIRFDT IKSY F+QNVD+ CV+KK+ VAFLVLYVDDILLIGNDVGYLTD+K WL
Subjt: ANFEESIYMAQPEGFIEKGQEQKVCKLQKSIYGLKKACRSSNIRFDTTIKSYDFEQNVDKHCVHKKVVNSIVAFLVLYVDDILLIGNDVGYLTDIKKWLT
Query: TQFQMKDLRDAQ
QFQMKDL +AQ
Subjt: TQFQMKDLRDAQ
|
|
| E2GK51 Gag/pol protein (Fragment) | 7.2e-97 | 82.55 | Show/hide |
Query: MDLEMESIYFNSAWTLIDQPNDVKPFSCKWIYKRKRDKVGNVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSITTFYDYEIWQKDVKTAFLN
M+LEMES+YFNS WTL+D P+DVKP CKWIYKRKRD+ G VQTFKARLVAKGYTQ+EGVDYEETFSPVAMLKSIRILLSI TFY+YEIWQ DVKTAFLN
Subjt: MDLEMESIYFNSAWTLIDQPNDVKPFSCKWIYKRKRDKVGNVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSITTFYDYEIWQKDVKTAFLN
Query: ANFEESIYMAQPEGFIEKGQEQKVCKLQKSIYGLKKACRSSNIRFDTTIKSYDFEQNVDKHCVHKKVVNSIVAFLVLYVDDILLIGNDVGYLTDIKKWLT
N EESIYM QPEGFI + QEQKVCKLQKSIYGLK+A RS NIRFDT IKSY FEQNVD+ CV+KK+VNS+VAFL+LYVDDILLIGNDV YLTD+KKWL
Subjt: ANFEESIYMAQPEGFIEKGQEQKVCKLQKSIYGLKKACRSSNIRFDTTIKSYDFEQNVDKHCVHKKVVNSIVAFLVLYVDDILLIGNDVGYLTDIKKWLT
Query: TQFQMKDLRDAQ
TQFQMKDL +AQ
Subjt: TQFQMKDLRDAQ
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 6.9e-36 | 36.15 | Show/hide |
Query: MDLEMESIYFNSAWTLIDQPNDVKPFSCKWIYKRKRDKVGNVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSITTFYDYEIWQKDVKTAFLN
++ E+ + N+ WT+ +P + +W++ K +++GN +KARLVA+G+TQ+ +DYEETF+PVA + S R +LS+ Y+ ++ Q DVKTAFLN
Subjt: MDLEMESIYFNSAWTLIDQPNDVKPFSCKWIYKRKRDKVGNVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSITTFYDYEIWQKDVKTAFLN
Query: ANFEESIYMAQPEGFIEKGQEQKVCKLQKSIYGLKKACRSSNIRFDTTIKSYDFEQNVDKHCVH---KKVVNSIVAFLVLYVDDILLIGNDVGYLTDIKK
+E IYM P+G VCKL K+IYGLK+A R F+ +K +F + C++ K +N + +++LYVDD+++ D+ + + K+
Subjt: ANFEESIYMAQPEGFIEKGQEQKVCKLQKSIYGLKKACRSSNIRFDTTIKSYDFEQNVDKHCVH---KKVVNSIVAFLVLYVDDILLIGNDVGYLTDIKK
Query: WLTTQFQMKDLRD
+L +F+M DL +
Subjt: WLTTQFQMKDLRD
|
|
| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.5e-46 | 44.13 | Show/hide |
Query: MDLEMESIYFNSAWTLIDQPNDVKPFSCKWIYKRKRDKVGNVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSITTFYDYEIWQKDVKTAFLN
M EMES+ N + L++ P +P CKW++K K+D + +KARLV KG+ Q++G+D++E FSPV + SIR +LS+ D E+ Q DVKTAFL+
Subjt: MDLEMESIYFNSAWTLIDQPNDVKPFSCKWIYKRKRDKVGNVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSITTFYDYEIWQKDVKTAFLN
Query: ANFEESIYMAQPEGFIEKGQEQKVCKLQKSIYGLKKACRSSNIRFDTTIKSYDFEQNVDKHCVH-KKVVNSIVAFLVLYVDDILLIGNDVGYLTDIKKWL
+ EE IYM QPEGF G++ VCKL KS+YGLK+A R ++FD+ +KS + + CV+ K+ + L+LYVDD+L++G D G + +K L
Subjt: ANFEESIYMAQPEGFIEKGQEQKVCKLQKSIYGLKKACRSSNIRFDTTIKSYDFEQNVDKHCVH-KKVVNSIVAFLVLYVDDILLIGNDVGYLTDIKKWL
Query: TTQFQMKDLRDAQ
+ F MKDL AQ
Subjt: TTQFQMKDLRDAQ
|
|
| P92520 Uncharacterized mitochondrial protein AtMg00820 | 1.5e-11 | 38.27 | Show/hide |
Query: MDLEMESIYFNSAWTLIDQPNDVKPFSCKWIYKRKRDKVGNVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSI
M E++++ N W L+ P + CKW++K K G + KARLVAKG+ Q EG+ + ET+SPV +IR +L++
Subjt: MDLEMESIYFNSAWTLIDQPNDVKPFSCKWIYKRKRDKVGNVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSI
|
|
| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 9.9e-35 | 37.98 | Show/hide |
Query: MDLEMESIYFNSAWTLI-DQPNDVKPFSCKWIYKRKRDKVGNVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSITTFYDYEIWQKDVKTAFL
M E+ + N W L+ P+ V C+WI+ +K + G++ +KARLVAKGY QR G+DY ETFSPV SIRI+L + + I Q DV AFL
Subjt: MDLEMESIYFNSAWTLI-DQPNDVKPFSCKWIYKRKRDKVGNVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSITTFYDYEIWQKDVKTAFL
Query: NANFEESIYMAQPEGFIEKGQEQKVCKLQKSIYGLKKACRSSNIRFDTTIKSYDFEQNVDKHCVHKKVVNSIVAFLVLYVDDILLIGNDVGYLTDIKKWL
+ +YM+QP GFI+K + VCKL+K++YGLK+A R+ + + + F +V + + ++++YVDDIL+ GND L + L
Subjt: NANFEESIYMAQPEGFIEKGQEQKVCKLQKSIYGLKKACRSSNIRFDTTIKSYDFEQNVDKHCVHKKVVNSIVAFLVLYVDDILLIGNDVGYLTDIKKWL
Query: TTQFQMKD
+ +F +KD
Subjt: TTQFQMKD
|
|
| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 2.2e-34 | 36.97 | Show/hide |
Query: MDLEMESIYFNSAWTLI-DQPNDVKPFSCKWIYKRKRDKVGNVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSITTFYDYEIWQKDVKTAFL
M E+ + N W L+ P V C+WI+ +K + G++ +KARLVAKGY QR G+DY ETFSPV SIRI+L + + I Q DV AFL
Subjt: MDLEMESIYFNSAWTLI-DQPNDVKPFSCKWIYKRKRDKVGNVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSITTFYDYEIWQKDVKTAFL
Query: NANFEESIYMAQPEGFIEKGQEQKVCKLQKSIYGLKKACRSSNIRFDTTIKSYDFEQNVDKHCVHKKVVNSIVAFLVLYVDDILLIGNDVGYLTDIKKWL
+ +YM+QP GF++K + VC+L+K+IYGLK+A R+ + T + + F ++ + + ++++YVDDIL+ GND L L
Subjt: NANFEESIYMAQPEGFIEKGQEQKVCKLQKSIYGLKKACRSSNIRFDTTIKSYDFEQNVDKHCVHKKVVNSIVAFLVLYVDDILLIGNDVGYLTDIKKWL
Query: TTQFQMKDLRD
+ +F +K+ D
Subjt: TTQFQMKDLRD
|
|
