; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc08g0227781 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc08g0227781
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionGag/pol protein
Genome locationCMiso1.1chr08:21116442..21117134
RNA-Seq ExpressionCmc08g0227781
SyntenyCmc08g0227781
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041273.1 gag/pol protein [Cucumis melo var. makuwa]1.6e-12094.78Show/hide
Query:  MRHIPYASAVGSMMYAMLCTRPDICYAVEIVSRYQSNPRLAHWTAVKTILKYLRITMDYMLVYGSKNLILTGYTDSDFQTDRNSRKSTSGSVFTLNGGAV
        MRHIPYAS VGSMMYAMLCTRPDICYAVEIVSRYQSNPRLAHWTAVKTILKYLRITMDYMLVYGSKNLILT YTDSDFQT RNSRKSTSGSVFTLNGG V
Subjt:  MRHIPYASAVGSMMYAMLCTRPDICYAVEIVSRYQSNPRLAHWTAVKTILKYLRITMDYMLVYGSKNLILTGYTDSDFQTDRNSRKSTSGSVFTLNGGAV

Query:  VWRSIKQGCIADSTMEAEYVAAWEAAKEAVWLRKFLTNLEVVPNMSKPITLYCDNSGAVANSSEPRSHKRGKHIEHKYHLIREIVHRGDLIIKQIASTHN
        VWRSIKQGCIADSTME EYVAAW+AAKE VWLR FLTNLEVVPNMSKPITLYCDNSG VANSSEPRSHKRGKHIEHKYHLIREIVHRGDLII QIASTHN
Subjt:  VWRSIKQGCIADSTMEAEYVAAWEAAKEAVWLRKFLTNLEVVPNMSKPITLYCDNSGAVANSSEPRSHKRGKHIEHKYHLIREIVHRGDLIIKQIASTHN

Query:  VADPFTKPLRAKVFEGYLESLGLRGMPHLI
        VADPFT PLRAKVFEGYLESLGLR MPHLI
Subjt:  VADPFTKPLRAKVFEGYLESLGLRGMPHLI

KAA0046416.1 gag/pol protein [Cucumis melo var. makuwa]2.3e-11491.27Show/hide
Query:  MRHIPYASAVGSMMYAMLCTRPDICYAVEIVSRYQSNPRLAHWTAVKTILKYLRITMDYMLVYGSKNLILTGYTDSDFQTDRNSRKSTSGSVFTLNGGAV
        MRHIPYASAVGS+MYAMLCTRPDICYAV IVSRYQSNP LAHWTAVKTILKYLR T DYMLVYGSK+LILTGYTDSDFQTDR+SRKSTSGSVFTLNGGAV
Subjt:  MRHIPYASAVGSMMYAMLCTRPDICYAVEIVSRYQSNPRLAHWTAVKTILKYLRITMDYMLVYGSKNLILTGYTDSDFQTDRNSRKSTSGSVFTLNGGAV

Query:  VWRSIKQGCIADSTMEAEYVAAWEAAKEAVWLRKFLTNLEVVPNMSKPITLYCDNSGAVANSSEPRSHKRGKHIEHKYHLIREIVHRGDLIIKQIASTHN
        VWRSIKQGCI DSTMEAEYVAA EAAKEAVWLR FL +LEVVPNMSKPITLYCDNSGAVANS EPRSHKRGKHIE KYHLIREIVHRGD+I+ QIASTHN
Subjt:  VWRSIKQGCIADSTMEAEYVAAWEAAKEAVWLRKFLTNLEVVPNMSKPITLYCDNSGAVANSSEPRSHKRGKHIEHKYHLIREIVHRGDLIIKQIASTHN

Query:  VADPFTKPLRAKVFEGYLESLGLRGMPHL
        VADPFTKPL AKVFEG+LESLGLR MPHL
Subjt:  VADPFTKPLRAKVFEGYLESLGLRGMPHL

KAA0048404.1 gag/pol protein [Cucumis melo var. makuwa]3.8e-11491.27Show/hide
Query:  MRHIPYASAVGSMMYAMLCTRPDICYAVEIVSRYQSNPRLAHWTAVKTILKYLRITMDYMLVYGSKNLILTGYTDSDFQTDRNSRKSTSGSVFTLNGGAV
        MRHIPYASAVGS+MYAMLCTRPDICYAV IVSRYQSNP LAHWTAVKTILKYLR T DY LVYGSK+LILTGYTDSDFQTDR+SRKSTSGSVFTLNGGAV
Subjt:  MRHIPYASAVGSMMYAMLCTRPDICYAVEIVSRYQSNPRLAHWTAVKTILKYLRITMDYMLVYGSKNLILTGYTDSDFQTDRNSRKSTSGSVFTLNGGAV

Query:  VWRSIKQGCIADSTMEAEYVAAWEAAKEAVWLRKFLTNLEVVPNMSKPITLYCDNSGAVANSSEPRSHKRGKHIEHKYHLIREIVHRGDLIIKQIASTHN
        VWRSIKQGCIADSTMEAEYVAA EAAKEAVWLR FL +LEVVPNMSKPITLYCDNSGAVANS EPRSHKRGKHIE KYHLIREIVHRGD+I+ QIASTHN
Subjt:  VWRSIKQGCIADSTMEAEYVAAWEAAKEAVWLRKFLTNLEVVPNMSKPITLYCDNSGAVANSSEPRSHKRGKHIEHKYHLIREIVHRGDLIIKQIASTHN

Query:  VADPFTKPLRAKVFEGYLESLGLRGMPHL
        VADPFTKPL AKVFEG+LESLGLR MPHL
Subjt:  VADPFTKPLRAKVFEGYLESLGLRGMPHL

TYJ97618.1 gag/pol protein [Cucumis melo var. makuwa]3.8e-11491.27Show/hide
Query:  MRHIPYASAVGSMMYAMLCTRPDICYAVEIVSRYQSNPRLAHWTAVKTILKYLRITMDYMLVYGSKNLILTGYTDSDFQTDRNSRKSTSGSVFTLNGGAV
        MRHIPYASAVGS+MYAMLCTRPDICYAV IVSRYQSNP LAHWTAVKTILKYLR T DY LVYGSK+LILTGYTDSDFQTDR+SRKSTSGSVFTLNGGAV
Subjt:  MRHIPYASAVGSMMYAMLCTRPDICYAVEIVSRYQSNPRLAHWTAVKTILKYLRITMDYMLVYGSKNLILTGYTDSDFQTDRNSRKSTSGSVFTLNGGAV

Query:  VWRSIKQGCIADSTMEAEYVAAWEAAKEAVWLRKFLTNLEVVPNMSKPITLYCDNSGAVANSSEPRSHKRGKHIEHKYHLIREIVHRGDLIIKQIASTHN
        VWRSIKQGCIADSTMEAEYVAA EAAKEAVWLR FL +LEVVPNMSKPITLYCDNSGAVANS EPRSHKRGKHIE KYHLIREIVHRGD+I+ QIASTHN
Subjt:  VWRSIKQGCIADSTMEAEYVAAWEAAKEAVWLRKFLTNLEVVPNMSKPITLYCDNSGAVANSSEPRSHKRGKHIEHKYHLIREIVHRGDLIIKQIASTHN

Query:  VADPFTKPLRAKVFEGYLESLGLRGMPHL
        VADPFTKPL AKVFEG+LESLGLR MPHL
Subjt:  VADPFTKPLRAKVFEGYLESLGLRGMPHL

TYK19524.1 gag/pol protein [Cucumis melo var. makuwa]3.8e-11491.27Show/hide
Query:  MRHIPYASAVGSMMYAMLCTRPDICYAVEIVSRYQSNPRLAHWTAVKTILKYLRITMDYMLVYGSKNLILTGYTDSDFQTDRNSRKSTSGSVFTLNGGAV
        MRHIPYASAVGS+MYAMLCTRPDICYAV IVSRYQSNP LAHWTAVKTILKYLR T DY LVYGSK+LILTGYTDSDFQTDR+SRKSTSGSVFTLNGGAV
Subjt:  MRHIPYASAVGSMMYAMLCTRPDICYAVEIVSRYQSNPRLAHWTAVKTILKYLRITMDYMLVYGSKNLILTGYTDSDFQTDRNSRKSTSGSVFTLNGGAV

Query:  VWRSIKQGCIADSTMEAEYVAAWEAAKEAVWLRKFLTNLEVVPNMSKPITLYCDNSGAVANSSEPRSHKRGKHIEHKYHLIREIVHRGDLIIKQIASTHN
        VWRSIKQGCIADSTMEAEYVAA EAAKEAVWLR FL +LEVVPNMSKPITLYCDNSGAVANS EPRSHKRGKHIE KYHLIREIVHRGD+I+ QIASTHN
Subjt:  VWRSIKQGCIADSTMEAEYVAAWEAAKEAVWLRKFLTNLEVVPNMSKPITLYCDNSGAVANSSEPRSHKRGKHIEHKYHLIREIVHRGDLIIKQIASTHN

Query:  VADPFTKPLRAKVFEGYLESLGLRGMPHL
        VADPFTKPL AKVFEG+LESLGLR MPHL
Subjt:  VADPFTKPLRAKVFEGYLESLGLRGMPHL

TrEMBL top hitse value%identityAlignment
A0A5A7SMH8 Gag/pol protein1.9e-11491.27Show/hide
Query:  MRHIPYASAVGSMMYAMLCTRPDICYAVEIVSRYQSNPRLAHWTAVKTILKYLRITMDYMLVYGSKNLILTGYTDSDFQTDRNSRKSTSGSVFTLNGGAV
        MRHIPYASAVGS+MYAMLCTRPDICYAV IVSRYQSNP LAHWTAVKTILKYLR T DY LVYGSK+LILTGYTDSDFQTDR+SRKSTSGSVFTLNGGAV
Subjt:  MRHIPYASAVGSMMYAMLCTRPDICYAVEIVSRYQSNPRLAHWTAVKTILKYLRITMDYMLVYGSKNLILTGYTDSDFQTDRNSRKSTSGSVFTLNGGAV

Query:  VWRSIKQGCIADSTMEAEYVAAWEAAKEAVWLRKFLTNLEVVPNMSKPITLYCDNSGAVANSSEPRSHKRGKHIEHKYHLIREIVHRGDLIIKQIASTHN
        VWRSIKQGCIADSTMEAEYVAA EAAKEAVWLR FL +LEVVPNMSKPITLYCDNSGAVANS EPRSHKRGKHIE KYHLIREIVHRGD+I+ QIASTHN
Subjt:  VWRSIKQGCIADSTMEAEYVAAWEAAKEAVWLRKFLTNLEVVPNMSKPITLYCDNSGAVANSSEPRSHKRGKHIEHKYHLIREIVHRGDLIIKQIASTHN

Query:  VADPFTKPLRAKVFEGYLESLGLRGMPHL
        VADPFTKPL AKVFEG+LESLGLR MPHL
Subjt:  VADPFTKPLRAKVFEGYLESLGLRGMPHL

A0A5A7TWI0 Gag/pol protein1.1e-11491.27Show/hide
Query:  MRHIPYASAVGSMMYAMLCTRPDICYAVEIVSRYQSNPRLAHWTAVKTILKYLRITMDYMLVYGSKNLILTGYTDSDFQTDRNSRKSTSGSVFTLNGGAV
        MRHIPYASAVGS+MYAMLCTRPDICYAV IVSRYQSNP LAHWTAVKTILKYLR T DYMLVYGSK+LILTGYTDSDFQTDR+SRKSTSGSVFTLNGGAV
Subjt:  MRHIPYASAVGSMMYAMLCTRPDICYAVEIVSRYQSNPRLAHWTAVKTILKYLRITMDYMLVYGSKNLILTGYTDSDFQTDRNSRKSTSGSVFTLNGGAV

Query:  VWRSIKQGCIADSTMEAEYVAAWEAAKEAVWLRKFLTNLEVVPNMSKPITLYCDNSGAVANSSEPRSHKRGKHIEHKYHLIREIVHRGDLIIKQIASTHN
        VWRSIKQGCI DSTMEAEYVAA EAAKEAVWLR FL +LEVVPNMSKPITLYCDNSGAVANS EPRSHKRGKHIE KYHLIREIVHRGD+I+ QIASTHN
Subjt:  VWRSIKQGCIADSTMEAEYVAAWEAAKEAVWLRKFLTNLEVVPNMSKPITLYCDNSGAVANSSEPRSHKRGKHIEHKYHLIREIVHRGDLIIKQIASTHN

Query:  VADPFTKPLRAKVFEGYLESLGLRGMPHL
        VADPFTKPL AKVFEG+LESLGLR MPHL
Subjt:  VADPFTKPLRAKVFEGYLESLGLRGMPHL

A0A5D3BHG7 Gag/pol protein1.9e-11491.27Show/hide
Query:  MRHIPYASAVGSMMYAMLCTRPDICYAVEIVSRYQSNPRLAHWTAVKTILKYLRITMDYMLVYGSKNLILTGYTDSDFQTDRNSRKSTSGSVFTLNGGAV
        MRHIPYASAVGS+MYAMLCTRPDICYAV IVSRYQSNP LAHWTAVKTILKYLR T DY LVYGSK+LILTGYTDSDFQTDR+SRKSTSGSVFTLNGGAV
Subjt:  MRHIPYASAVGSMMYAMLCTRPDICYAVEIVSRYQSNPRLAHWTAVKTILKYLRITMDYMLVYGSKNLILTGYTDSDFQTDRNSRKSTSGSVFTLNGGAV

Query:  VWRSIKQGCIADSTMEAEYVAAWEAAKEAVWLRKFLTNLEVVPNMSKPITLYCDNSGAVANSSEPRSHKRGKHIEHKYHLIREIVHRGDLIIKQIASTHN
        VWRSIKQGCIADSTMEAEYVAA EAAKEAVWLR FL +LEVVPNMSKPITLYCDNSGAVANS EPRSHKRGKHIE KYHLIREIVHRGD+I+ QIASTHN
Subjt:  VWRSIKQGCIADSTMEAEYVAAWEAAKEAVWLRKFLTNLEVVPNMSKPITLYCDNSGAVANSSEPRSHKRGKHIEHKYHLIREIVHRGDLIIKQIASTHN

Query:  VADPFTKPLRAKVFEGYLESLGLRGMPHL
        VADPFTKPL AKVFEG+LESLGLR MPHL
Subjt:  VADPFTKPLRAKVFEGYLESLGLRGMPHL

A0A5D3CPJ6 Gag/pol protein1.9e-11491.27Show/hide
Query:  MRHIPYASAVGSMMYAMLCTRPDICYAVEIVSRYQSNPRLAHWTAVKTILKYLRITMDYMLVYGSKNLILTGYTDSDFQTDRNSRKSTSGSVFTLNGGAV
        MRHIPYASAVGS+MYAMLCTRPDICYAV IVSRYQSNP LAHWTAVKTILKYLR T DY LVYGSK+LILTGYTDSDFQTDR+SRKSTSGSVFTLNGGAV
Subjt:  MRHIPYASAVGSMMYAMLCTRPDICYAVEIVSRYQSNPRLAHWTAVKTILKYLRITMDYMLVYGSKNLILTGYTDSDFQTDRNSRKSTSGSVFTLNGGAV

Query:  VWRSIKQGCIADSTMEAEYVAAWEAAKEAVWLRKFLTNLEVVPNMSKPITLYCDNSGAVANSSEPRSHKRGKHIEHKYHLIREIVHRGDLIIKQIASTHN
        VWRSIKQGCIADSTMEAEYVAA EAAKEAVWLR FL +LEVVPNMSKPITLYCDNSGAVANS EPRSHKRGKHIE KYHLIREIVHRGD+I+ QIASTHN
Subjt:  VWRSIKQGCIADSTMEAEYVAAWEAAKEAVWLRKFLTNLEVVPNMSKPITLYCDNSGAVANSSEPRSHKRGKHIEHKYHLIREIVHRGDLIIKQIASTHN

Query:  VADPFTKPLRAKVFEGYLESLGLRGMPHL
        VADPFTKPL AKVFEG+LESLGLR MPHL
Subjt:  VADPFTKPLRAKVFEGYLESLGLRGMPHL

A0A5D3D0T2 Gag/pol protein7.8e-12194.78Show/hide
Query:  MRHIPYASAVGSMMYAMLCTRPDICYAVEIVSRYQSNPRLAHWTAVKTILKYLRITMDYMLVYGSKNLILTGYTDSDFQTDRNSRKSTSGSVFTLNGGAV
        MRHIPYAS VGSMMYAMLCTRPDICYAVEIVSRYQSNPRLAHWTAVKTILKYLRITMDYMLVYGSKNLILT YTDSDFQT RNSRKSTSGSVFTLNGG V
Subjt:  MRHIPYASAVGSMMYAMLCTRPDICYAVEIVSRYQSNPRLAHWTAVKTILKYLRITMDYMLVYGSKNLILTGYTDSDFQTDRNSRKSTSGSVFTLNGGAV

Query:  VWRSIKQGCIADSTMEAEYVAAWEAAKEAVWLRKFLTNLEVVPNMSKPITLYCDNSGAVANSSEPRSHKRGKHIEHKYHLIREIVHRGDLIIKQIASTHN
        VWRSIKQGCIADSTME EYVAAW+AAKE VWLR FLTNLEVVPNMSKPITLYCDNSG VANSSEPRSHKRGKHIEHKYHLIREIVHRGDLII QIASTHN
Subjt:  VWRSIKQGCIADSTMEAEYVAAWEAAKEAVWLRKFLTNLEVVPNMSKPITLYCDNSGAVANSSEPRSHKRGKHIEHKYHLIREIVHRGDLIIKQIASTHN

Query:  VADPFTKPLRAKVFEGYLESLGLRGMPHLI
        VADPFT PLRAKVFEGYLESLGLR MPHLI
Subjt:  VADPFTKPLRAKVFEGYLESLGLRGMPHLI

SwissProt top hitse value%identityAlignment
P04146 Copia protein8.5e-4040.18Show/hide
Query:  PYASAVGSMMYAMLCTRPDICYAVEIVSRYQSNPRLAHWTAVKTILKYLRITMDYMLVYGSKNLI----LTGYTDSDFQTDRNSRKSTSGSVFTL-NGGA
        P  S +G +MY MLCTRPD+  AV I+SRY S      W  +K +L+YL+ T+D  L++  KNL     + GY DSD+      RKST+G +F + +   
Subjt:  PYASAVGSMMYAMLCTRPDICYAVEIVSRYQSNPRLAHWTAVKTILKYLRITMDYMLVYGSKNLI----LTGYTDSDFQTDRNSRKSTSGSVFTL-NGGA

Query:  VVWRSIKQGCIADSTMEAEYVAAWEAAKEAVWLRKFLTNLEVVPNMSKPITLYCDNSGAVANSSEPRSHKRGKHIEHKYHLIREIVHRGDLIIKQIASTH
        + W + +Q  +A S+ EAEY+A +EA +EA+WL+  LT++ +   +  PI +Y DN G ++ ++ P  HKR KHI+ KYH  RE V    + ++ I + +
Subjt:  VVWRSIKQGCIADSTMEAEYVAAWEAAKEAVWLRKFLTNLEVVPNMSKPITLYCDNSGAVANSSEPRSHKRGKHIEHKYHLIREIVHRGDLIIKQIASTH

Query:  NVADPFTKPLRAKVFEGYLESLGL
         +AD FTKPL A  F    + LGL
Subjt:  NVADPFTKPLRAKVFEGYLESLGL

P0CV72 Secreted RxLR effector protein 1617.5e-2848.87Show/hide
Query:  MRHIPYASAVGSMMYAMLCTRPDICYAVEIVSRYQSNPRLAHWTAVKTILKYLRITMDYMLVYGSKNLI-LTGYTDSDFQTDRNSRKSTSGSVFTLNGGA
        M+++PY SAVG++MY M+ TRPD+  AV ++S++ S+P   HW A+K +L+YL+ T  Y L +       L GY+D+D+  D  SR+STSG +F LNGG 
Subjt:  MRHIPYASAVGSMMYAMLCTRPDICYAVEIVSRYQSNPRLAHWTAVKTILKYLRITMDYMLVYGSKNLI-LTGYTDSDFQTDRNSRKSTSGSVFTLNGGA

Query:  VVWRSIKQGCIADSTMEAEYVAAWEAAKEAVWL
        V WRS KQ  +A S+ E EY+A  EA +EAVWL
Subjt:  VVWRSIKQGCIADSTMEAEYVAAWEAAKEAVWL

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-941.2e-4946.64Show/hide
Query:  MRHIPYASAVGSMMYAMLCTRPDICYAVEIVSRYQSNPRLAHWTAVKTILKYLRITMDYMLVYGSKNLILTGYTDSDFQTDRNSRKSTSGSVFTLNGGAV
        M  +PY+SAVGS+MYAM+CTRPDI +AV +VSR+  NP   HW AVK IL+YLR T    L +G  + IL GYTD+D   D ++RKS++G +FT +GGA+
Subjt:  MRHIPYASAVGSMMYAMLCTRPDICYAVEIVSRYQSNPRLAHWTAVKTILKYLRITMDYMLVYGSKNLILTGYTDSDFQTDRNSRKSTSGSVFTLNGGAV

Query:  VWRSIKQGCIADSTMEAEYVAAWEAAKEAVWLRKFLTNLEVVPNMSKPITLYCDNSGAVANSSEPRSHKRGKHIEHKYHLIREIVHRGDLIIKQIASTHN
         W+S  Q C+A ST EAEY+AA E  KE +WL++FL  L +     K   +YCD+  A+  S     H R KHI+ +YH IRE+V    L + +I++  N
Subjt:  VWRSIKQGCIADSTMEAEYVAAWEAAKEAVWLRKFLTNLEVVPNMSKPITLYCDNSGAVANSSEPRSHKRGKHIEHKYHLIREIVHRGDLIIKQIASTHN

Query:  VADPFTKPLRAKVFEGYLESLGL
         AD  TK +    FE   E +G+
Subjt:  VADPFTKPLRAKVFEGYLESLGL

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE15.2e-2934.53Show/hide
Query:  YASAVGSMMYAMLCTRPDICYAVEIVSRYQSNPRLAHWTAVKTILKYLRITMDYMLVYGSKN-LILTGYTDSDFQTDRNSRKSTSGSVFTLNGGAVVWRS
        Y   VGS+ Y +  TRPDI YAV  +S++   P   H  A+K IL+YL  T ++ +     N L L  Y+D+D+  D++   ST+G +  L    + W S
Subjt:  YASAVGSMMYAMLCTRPDICYAVEIVSRYQSNPRLAHWTAVKTILKYLRITMDYMLVYGSKN-LILTGYTDSDFQTDRNSRKSTSGSVFTLNGGAVVWRS

Query:  IKQGCIADSTMEAEYVAAWEAAKEAVWLRKFLTNLEVVPNMSKPITLYCDNSGAVANSSEPRSHKRGKHIEHKYHLIREIVHRGDLIIKQIASTHNVADP
         KQ  +  S+ EAEY +    + E  W+   LT L +   +++P  +YCDN GA    + P  H R KHI   YH IR  V  G L +  +++   +AD 
Subjt:  IKQGCIADSTMEAEYVAAWEAAKEAVWLRKFLTNLEVVPNMSKPITLYCDNSGAVANSSEPRSHKRGKHIEHKYHLIREIVHRGDLIIKQIASTHNVADP

Query:  FTKPLRAKVFEGYLESLGLRGMP
         TKPL    F+ +   +G+  +P
Subjt:  FTKPLRAKVFEGYLESLGLRGMP

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE22.7e-3035.43Show/hide
Query:  YASAVGSMMYAMLCTRPDICYAVEIVSRYQSNPRLAHWTAVKTILKYLRITMDYMLVYGSKN-LILTGYTDSDFQTDRNSRKSTSGSVFTLNGGAVVWRS
        Y   VGS+ Y +  TRPD+ YAV  +S+Y   P   HW A+K +L+YL  T D+ +     N L L  Y+D+D+  D +   ST+G +  L    + W S
Subjt:  YASAVGSMMYAMLCTRPDICYAVEIVSRYQSNPRLAHWTAVKTILKYLRITMDYMLVYGSKN-LILTGYTDSDFQTDRNSRKSTSGSVFTLNGGAVVWRS

Query:  IKQGCIADSTMEAEYVAAWEAAKEAVWLRKFLTNLEVVPNMSKPITLYCDNSGAVANSSEPRSHKRGKHIEHKYHLIREIVHRGDLIIKQIASTHNVADP
         KQ  +  S+ EAEY +    + E  W+   LT L +   +S P  +YCDN GA    + P  H R KHI   YH IR  V  G L +  +++   +AD 
Subjt:  IKQGCIADSTMEAEYVAAWEAAKEAVWLRKFLTNLEVVPNMSKPITLYCDNSGAVANSSEPRSHKRGKHIEHKYHLIREIVHRGDLIIKQIASTHNVADP

Query:  FTKPLRAKVFEGYLESLGLRGMP
         TKPL    F+ +   +G+  +P
Subjt:  FTKPLRAKVFEGYLESLGLRGMP

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 82.5e-2635.06Show/hide
Query:  YASAVGSMMYAMLCTRPDICYAVEIVSRYQSNPRLAHWTAVKTILKYLRITMDYMLVYGSK-NLILTGYTDSDFQTDRNSRKSTSGSVFTLNGGAVVWRS
        Y   +G +MY  + TR DI +AV  +S++   PRLAH  AV  IL Y++ T+   L Y S+  + L  ++D+ FQ+ +++R+ST+G    L    + W+S
Subjt:  YASAVGSMMYAMLCTRPDICYAVEIVSRYQSNPRLAHWTAVKTILKYLRITMDYMLVYGSK-NLILTGYTDSDFQTDRNSRKSTSGSVFTLNGGAVVWRS

Query:  IKQGCIADSTMEAEYVAAWEAAKEAVWLRKFLTNLEVVPNMSKPITLYCDNSGAVANSSEPRSHKRGKHIEHKYHLIRE-IVHRGDLIIKQIASTHNVAD
         KQ  ++ S+ EAEY A   A  E +WL +F   L++   +SKP  L+CDN+ A+  ++    H+R KHIE   H +RE  V++  L        ++  D
Subjt:  IKQGCIADSTMEAEYVAAWEAAKEAVWLRKFLTNLEVVPNMSKPITLYCDNSGAVANSSEPRSHKRGKHIEHKYHLIRE-IVHRGDLIIKQIASTHNVAD

Query:  PFTKPLRAKVFEG---YLESL-GLRGMPHLI
         FT+ L + +  G   Y+ S+ GL G+  LI
Subjt:  PFTKPLRAKVFEG---YLESL-GLRGMPHLI

ATMG00240.1 Gag-Pol-related retrotransposon family protein2.7e-0434.72Show/hide
Query:  TRPDICYAVEIVSRYQSNPRLAHWTAVKTILKYLRITMDYMLVY-GSKNLILTGYTDSDFQTDRNSRKSTSG
        TRPD+ +AV  +S++ S  R A   AV  +L Y++ T+   L Y  + +L L  + DSD+ +  ++R+S +G
Subjt:  TRPDICYAVEIVSRYQSNPRLAHWTAVKTILKYLRITMDYMLVY-GSKNLILTGYTDSDFQTDRNSRKSTSG

ATMG00810.1 DNA/RNA polymerases superfamily protein1.7e-1132.28Show/hide
Query:  YASAVGSMMYAMLCTRPDICYAVEIVSRYQSNPRLAHWTAVKTILKYLRITMDY-MLVYGSKNLILTGYTDSDFQTDRNSRKSTSGSVFTLNGGAVVWRS
        + S VG++ Y  L TRPDI YAV IV +    P LA +  +K +L+Y++ T+ + + ++ +  L +  + DSD+    ++R+ST+G    L    + W +
Subjt:  YASAVGSMMYAMLCTRPDICYAVEIVSRYQSNPRLAHWTAVKTILKYLRITMDY-MLVYGSKNLILTGYTDSDFQTDRNSRKSTSGSVFTLNGGAVVWRS

Query:  IKQGCIADSTMEAEYVAAWEAAKEAVW
         +Q  ++ S+ E EY A    A E  W
Subjt:  IKQGCIADSTMEAEYVAAWEAAKEAVW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGACATATCCCTTATGCATCAGCTGTTGGCAGCATGATGTATGCGATGTTATGTACTAGACCTGACATTTGTTATGCGGTGGAGATAGTCAGTAGATATCAATCTAA
TCCAAGATTAGCTCATTGGACTGCCGTTAAAACTATCCTCAAGTATCTTAGGATAACGATGGACTACATGCTTGTGTATGGTTCTAAGAATTTGATTCTTACAGGATACA
CAGACTCTGATTTTCAAACTGATAGAAATTCTAGGAAATCTACTTCAGGTTCAGTGTTCACTCTTAACGGAGGAGCTGTAGTTTGGAGAAGTATCAAGCAAGGATGTATT
GCTGACTCCACCATGGAGGCAGAGTATGTCGCAGCTTGGGAAGCTGCCAAAGAGGCTGTTTGGCTTAGAAAATTTTTGACTAATTTGGAAGTAGTTCCAAACATGTCAAA
GCCAATTACTCTTTACTGTGATAATAGTGGGGCTGTGGCTAATTCTAGCGAGCCTAGAAGCCACAAGCGTGGAAAGCATATTGAACACAAGTATCACTTGATTCGAGAGA
TAGTGCATCGAGGGGACTTGATCATCAAACAGATAGCTTCGACACACAATGTTGCTGATCCGTTTACAAAGCCCCTCAGGGCTAAGGTGTTTGAGGGTTACCTAGAGAGT
CTAGGTCTACGTGGGATGCCACATTTAATCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGACATATCCCTTATGCATCAGCTGTTGGCAGCATGATGTATGCGATGTTATGTACTAGACCTGACATTTGTTATGCGGTGGAGATAGTCAGTAGATATCAATCTAA
TCCAAGATTAGCTCATTGGACTGCCGTTAAAACTATCCTCAAGTATCTTAGGATAACGATGGACTACATGCTTGTGTATGGTTCTAAGAATTTGATTCTTACAGGATACA
CAGACTCTGATTTTCAAACTGATAGAAATTCTAGGAAATCTACTTCAGGTTCAGTGTTCACTCTTAACGGAGGAGCTGTAGTTTGGAGAAGTATCAAGCAAGGATGTATT
GCTGACTCCACCATGGAGGCAGAGTATGTCGCAGCTTGGGAAGCTGCCAAAGAGGCTGTTTGGCTTAGAAAATTTTTGACTAATTTGGAAGTAGTTCCAAACATGTCAAA
GCCAATTACTCTTTACTGTGATAATAGTGGGGCTGTGGCTAATTCTAGCGAGCCTAGAAGCCACAAGCGTGGAAAGCATATTGAACACAAGTATCACTTGATTCGAGAGA
TAGTGCATCGAGGGGACTTGATCATCAAACAGATAGCTTCGACACACAATGTTGCTGATCCGTTTACAAAGCCCCTCAGGGCTAAGGTGTTTGAGGGTTACCTAGAGAGT
CTAGGTCTACGTGGGATGCCACATTTAATCTAA
Protein sequenceShow/hide protein sequence
MRHIPYASAVGSMMYAMLCTRPDICYAVEIVSRYQSNPRLAHWTAVKTILKYLRITMDYMLVYGSKNLILTGYTDSDFQTDRNSRKSTSGSVFTLNGGAVVWRSIKQGCI
ADSTMEAEYVAAWEAAKEAVWLRKFLTNLEVVPNMSKPITLYCDNSGAVANSSEPRSHKRGKHIEHKYHLIREIVHRGDLIIKQIASTHNVADPFTKPLRAKVFEGYLES
LGLRGMPHLI