| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0052755.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 7.3e-53 | 89.74 | Show/hide |
Query: MKEELKSMNENEVWDLVELPKESKRVGCKWIFKTKRDSNGNIEQYKARLVVKGYTQKDGIDYKETFSPVSKKNSLRIIMALVAHYDLELHQMDVKTVFLN
MKEELKSMN+NEVWDLVELPK+SKRVGCKW+FKTKRDSNGNIE+ KARLV KGYTQKDGIDYKETFSPVSKK+SLRIIMALVAHYDLELHQMDVKT FLN
Subjt: MKEELKSMNENEVWDLVELPKESKRVGCKWIFKTKRDSNGNIEQYKARLVVKGYTQKDGIDYKETFSPVSKKNSLRIIMALVAHYDLELHQMDVKTVFLN
Query: GNLDEEVFIDQPETYGV
GNLDEEVF+DQPE + V
Subjt: GNLDEEVFIDQPETYGV
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| KAA0061857.1 copia-like pol polyprotein [Cucumis melo var. makuwa] | 2.1e-52 | 87.18 | Show/hide |
Query: MKEELKSMNENEVWDLVELPKESKRVGCKWIFKTKRDSNGNIEQYKARLVVKGYTQKDGIDYKETFSPVSKKNSLRIIMALVAHYDLELHQMDVKTVFLN
MKEELKSMN+NEVWDLVELPKESKRVGCKW+F+TKRDSNGNIE+YKARLV KGYTQKDGIDYKETFSPVSKK+SLRIIMAL+AHYDL++HQMDVK FLN
Subjt: MKEELKSMNENEVWDLVELPKESKRVGCKWIFKTKRDSNGNIEQYKARLVVKGYTQKDGIDYKETFSPVSKKNSLRIIMALVAHYDLELHQMDVKTVFLN
Query: GNLDEEVFIDQPETYGV
GNLDEEVF+DQPE + V
Subjt: GNLDEEVFIDQPETYGV
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| KAA0065779.1 Integrase, catalytic core [Cucumis melo var. makuwa] | 1.2e-52 | 90.6 | Show/hide |
Query: MKEELKSMNENEVWDLVELPKESKRVGCKWIFKTKRDSNGNIEQYKARLVVKGYTQKDGIDYKETFSPVSKKNSLRIIMALVAHYDLELHQMDVKTVFLN
MKEELK MN+NEVWDLVELPKESKRVGCKWIFKTKRDSNGNIE+YKARLV KGYTQKDGIDYKETFSPVSKKNSLRII+ALVAHYDLEL QMDVKT FLN
Subjt: MKEELKSMNENEVWDLVELPKESKRVGCKWIFKTKRDSNGNIEQYKARLVVKGYTQKDGIDYKETFSPVSKKNSLRIIMALVAHYDLELHQMDVKTVFLN
Query: GNLDEEVFIDQPETYGV
GNLDEEVF+DQPE + V
Subjt: GNLDEEVFIDQPETYGV
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| TYK04201.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 7.3e-53 | 89.74 | Show/hide |
Query: MKEELKSMNENEVWDLVELPKESKRVGCKWIFKTKRDSNGNIEQYKARLVVKGYTQKDGIDYKETFSPVSKKNSLRIIMALVAHYDLELHQMDVKTVFLN
MKEELKSMN+NEVWDLVELPK+SKRVGCKW+FKTKRDSNGNIE+ KARLV KGYTQKDGIDYKETFSPVSKK+SLRIIMALVAHYDLELHQMDVKT FLN
Subjt: MKEELKSMNENEVWDLVELPKESKRVGCKWIFKTKRDSNGNIEQYKARLVVKGYTQKDGIDYKETFSPVSKKNSLRIIMALVAHYDLELHQMDVKTVFLN
Query: GNLDEEVFIDQPETYGV
GNLDEEVF+DQPE + V
Subjt: GNLDEEVFIDQPETYGV
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| TYK04469.1 copia-like pol polyprotein [Cucumis melo var. makuwa] | 1.1e-53 | 90.6 | Show/hide |
Query: MKEELKSMNENEVWDLVELPKESKRVGCKWIFKTKRDSNGNIEQYKARLVVKGYTQKDGIDYKETFSPVSKKNSLRIIMALVAHYDLELHQMDVKTVFLN
MKEELKSMN+NEVWDLVELPKESKRVGCKW+FKTKRDSNGNIE+YKARLV KGYTQKDGIDYKETFSPVSKK+SLRIIMALVAHYDLEL+QMDVKT FLN
Subjt: MKEELKSMNENEVWDLVELPKESKRVGCKWIFKTKRDSNGNIEQYKARLVVKGYTQKDGIDYKETFSPVSKKNSLRIIMALVAHYDLELHQMDVKTVFLN
Query: GNLDEEVFIDQPETYGV
GNLDEEVF+DQPE + V
Subjt: GNLDEEVFIDQPETYGV
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7UG95 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.5e-53 | 89.74 | Show/hide |
Query: MKEELKSMNENEVWDLVELPKESKRVGCKWIFKTKRDSNGNIEQYKARLVVKGYTQKDGIDYKETFSPVSKKNSLRIIMALVAHYDLELHQMDVKTVFLN
MKEELKSMN+NEVWDLVELPK+SKRVGCKW+FKTKRDSNGNIE+ KARLV KGYTQKDGIDYKETFSPVSKK+SLRIIMALVAHYDLELHQMDVKT FLN
Subjt: MKEELKSMNENEVWDLVELPKESKRVGCKWIFKTKRDSNGNIEQYKARLVVKGYTQKDGIDYKETFSPVSKKNSLRIIMALVAHYDLELHQMDVKTVFLN
Query: GNLDEEVFIDQPETYGV
GNLDEEVF+DQPE + V
Subjt: GNLDEEVFIDQPETYGV
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| A0A5A7V4M3 Copia-like pol polyprotein | 1.0e-52 | 87.18 | Show/hide |
Query: MKEELKSMNENEVWDLVELPKESKRVGCKWIFKTKRDSNGNIEQYKARLVVKGYTQKDGIDYKETFSPVSKKNSLRIIMALVAHYDLELHQMDVKTVFLN
MKEELKSMN+NEVWDLVELPKESKRVGCKW+F+TKRDSNGNIE+YKARLV KGYTQKDGIDYKETFSPVSKK+SLRIIMAL+AHYDL++HQMDVK FLN
Subjt: MKEELKSMNENEVWDLVELPKESKRVGCKWIFKTKRDSNGNIEQYKARLVVKGYTQKDGIDYKETFSPVSKKNSLRIIMALVAHYDLELHQMDVKTVFLN
Query: GNLDEEVFIDQPETYGV
GNLDEEVF+DQPE + V
Subjt: GNLDEEVFIDQPETYGV
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| A0A5D3BBX3 Integrase, catalytic core | 6.0e-53 | 90.6 | Show/hide |
Query: MKEELKSMNENEVWDLVELPKESKRVGCKWIFKTKRDSNGNIEQYKARLVVKGYTQKDGIDYKETFSPVSKKNSLRIIMALVAHYDLELHQMDVKTVFLN
MKEELK MN+NEVWDLVELPKESKRVGCKWIFKTKRDSNGNIE+YKARLV KGYTQKDGIDYKETFSPVSKKNSLRII+ALVAHYDLEL QMDVKT FLN
Subjt: MKEELKSMNENEVWDLVELPKESKRVGCKWIFKTKRDSNGNIEQYKARLVVKGYTQKDGIDYKETFSPVSKKNSLRIIMALVAHYDLELHQMDVKTVFLN
Query: GNLDEEVFIDQPETYGV
GNLDEEVF+DQPE + V
Subjt: GNLDEEVFIDQPETYGV
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| A0A5D3BWW5 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.5e-53 | 89.74 | Show/hide |
Query: MKEELKSMNENEVWDLVELPKESKRVGCKWIFKTKRDSNGNIEQYKARLVVKGYTQKDGIDYKETFSPVSKKNSLRIIMALVAHYDLELHQMDVKTVFLN
MKEELKSMN+NEVWDLVELPK+SKRVGCKW+FKTKRDSNGNIE+ KARLV KGYTQKDGIDYKETFSPVSKK+SLRIIMALVAHYDLELHQMDVKT FLN
Subjt: MKEELKSMNENEVWDLVELPKESKRVGCKWIFKTKRDSNGNIEQYKARLVVKGYTQKDGIDYKETFSPVSKKNSLRIIMALVAHYDLELHQMDVKTVFLN
Query: GNLDEEVFIDQPETYGV
GNLDEEVF+DQPE + V
Subjt: GNLDEEVFIDQPETYGV
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| A0A5D3C256 Copia-like pol polyprotein | 5.5e-54 | 90.6 | Show/hide |
Query: MKEELKSMNENEVWDLVELPKESKRVGCKWIFKTKRDSNGNIEQYKARLVVKGYTQKDGIDYKETFSPVSKKNSLRIIMALVAHYDLELHQMDVKTVFLN
MKEELKSMN+NEVWDLVELPKESKRVGCKW+FKTKRDSNGNIE+YKARLV KGYTQKDGIDYKETFSPVSKK+SLRIIMALVAHYDLEL+QMDVKT FLN
Subjt: MKEELKSMNENEVWDLVELPKESKRVGCKWIFKTKRDSNGNIEQYKARLVVKGYTQKDGIDYKETFSPVSKKNSLRIIMALVAHYDLELHQMDVKTVFLN
Query: GNLDEEVFIDQPETYGV
GNLDEEVF+DQPE + V
Subjt: GNLDEEVFIDQPETYGV
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 9.7e-24 | 46.36 | Show/hide |
Query: ELKSMNENEVWDLVELPKESKRVGCKWIFKTKRDSNGNIEQYKARLVVKGYTQKDGIDYKETFSPVSKKNSLRIIMALVAHYDLELHQMDVKTVFLNGNL
EL + N W + + P+ V +W+F K + GN +YKARLV +G+TQK IDY+ETF+PV++ +S R I++LV Y+L++HQMDVKT FLNG L
Subjt: ELKSMNENEVWDLVELPKESKRVGCKWIFKTKRDSNGNIEQYKARLVVKGYTQKDGIDYKETFSPVSKKNSLRIIMALVAHYDLELHQMDVKTVFLNGNL
Query: DEEVFIDQPE
EE+++ P+
Subjt: DEEVFIDQPE
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.4e-30 | 52.14 | Show/hide |
Query: MKEELKSMNENEVWDLVELPKESKRVGCKWIFKTKRDSNGNIEQYKARLVVKGYTQKDGIDYKETFSPVSKKNSLRIIMALVAHYDLELHQMDVKTVFLN
M+EE++S+ +N + LVELPK + + CKW+FK K+D + + +YKARLVVKG+ QK GID+ E FSPV K S+R I++L A DLE+ Q+DVKT FL+
Subjt: MKEELKSMNENEVWDLVELPKESKRVGCKWIFKTKRDSNGNIEQYKARLVVKGYTQKDGIDYKETFSPVSKKNSLRIIMALVAHYDLELHQMDVKTVFLN
Query: GNLDEEVFIDQPETYGV
G+L+EE++++QPE + V
Subjt: GNLDEEVFIDQPETYGV
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| P92520 Uncharacterized mitochondrial protein AtMg00820 | 1.4e-14 | 45.57 | Show/hide |
Query: MKEELKSMNENEVWDLVELPKESKRVGCKWIFKTKRDSNGNIEQYKARLVVKGYTQKDGIDYKETFSPVSKKNSLRIIM
M+EEL +++ N+ W LV P +GCKW+FKTK S+G +++ KARLV KG+ Q++GI + ET+SPV + ++R I+
Subjt: MKEELKSMNENEVWDLVELPKESKRVGCKWIFKTKRDSNGNIEQYKARLVVKGYTQKDGIDYKETFSPVSKKNSLRIIM
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 4.1e-22 | 44.25 | Show/hide |
Query: MKEELKSMNENEVWDLVELPKESKR-VGCKWIFKTKRDSNGNIEQYKARLVVKGYTQKDGIDYKETFSPVSKKNSLRIIMALVAHYDLELHQMDVKTVFL
M E+ + N WDLV P VGC+WIF K +S+G++ +YKARLV KGY Q+ G+DY ETFSPV K S+RI++ + + Q+DV FL
Subjt: MKEELKSMNENEVWDLVELPKESKR-VGCKWIFKTKRDSNGNIEQYKARLVVKGYTQKDGIDYKETFSPVSKKNSLRIIMALVAHYDLELHQMDVKTVFL
Query: NGNLDEEVFIDQP
G L ++V++ QP
Subjt: NGNLDEEVFIDQP
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 8.2e-23 | 46.02 | Show/hide |
Query: MKEELKSMNENEVWDLVELPKESKR-VGCKWIFKTKRDSNGNIEQYKARLVVKGYTQKDGIDYKETFSPVSKKNSLRIIMALVAHYDLELHQMDVKTVFL
M E+ + N WDLV P S VGC+WIF K +S+G++ +YKARLV KGY Q+ G+DY ETFSPV K S+RI++ + + Q+DV FL
Subjt: MKEELKSMNENEVWDLVELPKESKR-VGCKWIFKTKRDSNGNIEQYKARLVVKGYTQKDGIDYKETFSPVSKKNSLRIIMALVAHYDLELHQMDVKTVFL
Query: NGNLDEEVFIDQP
G L +EV++ QP
Subjt: NGNLDEEVFIDQP
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