; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc08g0227871 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc08g0227871
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionPolyprotein
Genome locationCMiso1.1chr08:21306917..21307432
RNA-Seq ExpressionCmc08g0227871
SyntenyCmc08g0227871
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0043227 - membrane-bounded organelle (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
InterPro domainsIPR043128 - Reverse transcriptase/Diguanylate cyclase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040659.1 uncharacterized protein E6C27_scaffold370G00130 [Cucumis melo var. makuwa]2.1e-6990.48Show/hide
Query:  MKAVETKEAKSDEPPVPDNIQKVLDEYKDIMPAELPKKLPPRREVNHEIELEPGAKPLAMAPYRMALPELEELRRQLKELLDAGYIQPSKAPHGAPILFQ
        MK +E +EAK+DEPPVPDNIQKVLDEYKDIMP+ELPKKLPPRREV+HEIELEPGAKP AMAPYRMA PELEELRRQLKELLDAGYIQPSKAP+GAP+LFQ
Subjt:  MKAVETKEAKSDEPPVPDNIQKVLDEYKDIMPAELPKKLPPRREVNHEIELEPGAKPLAMAPYRMALPELEELRRQLKELLDAGYIQPSKAPHGAPILFQ

Query:  KKKDGSLRLCIDYRALNKITIKNRYPIPLIADLFDQLGNAQWFSKID
        KKKDGSLRL IDYRALNKITIKNRYPIPLIADLFDQLG A+WFSKID
Subjt:  KKKDGSLRLCIDYRALNKITIKNRYPIPLIADLFDQLGNAQWFSKID

KAA0041284.1 uncharacterized protein E6C27_scaffold128G002760 [Cucumis melo var. makuwa]7.4e-7091.84Show/hide
Query:  MKAVETKEAKSDEPPVPDNIQKVLDEYKDIMPAELPKKLPPRREVNHEIELEPGAKPLAMAPYRMALPELEELRRQLKELLDAGYIQPSKAPHGAPILFQ
        MKAVET+EAKSDEPPVP+NIQKVLDEYKDIMPAELP+KLP RREV+HEIELEPGAKP AMAPYRMA PELEELRRQLKELLD GYIQPSKAP+GAP+LFQ
Subjt:  MKAVETKEAKSDEPPVPDNIQKVLDEYKDIMPAELPKKLPPRREVNHEIELEPGAKPLAMAPYRMALPELEELRRQLKELLDAGYIQPSKAPHGAPILFQ

Query:  KKKDGSLRLCIDYRALNKITIKNRYPIPLIADLFDQLGNAQWFSKID
        KKKDGSLRLCIDY ALNKITIKNRYPIPLIADLFDQLGNA+WFSKID
Subjt:  KKKDGSLRLCIDYRALNKITIKNRYPIPLIADLFDQLGNAQWFSKID

TYK02748.1 uncharacterized protein E5676_scaffold145G00020 [Cucumis melo var. makuwa]1.5e-7092.52Show/hide
Query:  MKAVETKEAKSDEPPVPDNIQKVLDEYKDIMPAELPKKLPPRREVNHEIELEPGAKPLAMAPYRMALPELEELRRQLKELLDAGYIQPSKAPHGAPILFQ
        MKAVET+EAKSDEPPVP+NIQKVLDEYKDIMPAELP+KLP RREV+HEIELEPGAKP AMAPYRMA PELEELRRQLKELLD GYIQPSKAP+GAP+LFQ
Subjt:  MKAVETKEAKSDEPPVPDNIQKVLDEYKDIMPAELPKKLPPRREVNHEIELEPGAKPLAMAPYRMALPELEELRRQLKELLDAGYIQPSKAPHGAPILFQ

Query:  KKKDGSLRLCIDYRALNKITIKNRYPIPLIADLFDQLGNAQWFSKID
        KKKDGSLRLCIDYRALNKITIKNRYPIPLIADLFDQLGNA+WFSKID
Subjt:  KKKDGSLRLCIDYRALNKITIKNRYPIPLIADLFDQLGNAQWFSKID

XP_008442289.1 PREDICTED: uncharacterized protein LOC103486198 [Cucumis melo]7.4e-7091.84Show/hide
Query:  MKAVETKEAKSDEPPVPDNIQKVLDEYKDIMPAELPKKLPPRREVNHEIELEPGAKPLAMAPYRMALPELEELRRQLKELLDAGYIQPSKAPHGAPILFQ
        MKAVET+EAKSDEPPVP+NIQKVLDEYKDIMPAELP+KLP RREV+HEIELEPGAKP AMAPYRMA PELEELRRQLKELLD GYIQPSKAP+GAP+LFQ
Subjt:  MKAVETKEAKSDEPPVPDNIQKVLDEYKDIMPAELPKKLPPRREVNHEIELEPGAKPLAMAPYRMALPELEELRRQLKELLDAGYIQPSKAPHGAPILFQ

Query:  KKKDGSLRLCIDYRALNKITIKNRYPIPLIADLFDQLGNAQWFSKID
        KKKDGSLRLCIDY ALNKITIKNRYPIPLIADLFDQLGNA+WFSKID
Subjt:  KKKDGSLRLCIDYRALNKITIKNRYPIPLIADLFDQLGNAQWFSKID

XP_008446938.1 PREDICTED: uncharacterized protein LOC103489499 [Cucumis melo]2.1e-6989.8Show/hide
Query:  MKAVETKEAKSDEPPVPDNIQKVLDEYKDIMPAELPKKLPPRREVNHEIELEPGAKPLAMAPYRMALPELEELRRQLKELLDAGYIQPSKAPHGAPILFQ
        MK +E ++ K DEPPVPDNIQKVLDEYKDIMP+ELPKKLPPRREV+HEIELEPGAKP AMAPYRMA PELEELRRQLKELLDAGYIQPSKAP+GAP+LFQ
Subjt:  MKAVETKEAKSDEPPVPDNIQKVLDEYKDIMPAELPKKLPPRREVNHEIELEPGAKPLAMAPYRMALPELEELRRQLKELLDAGYIQPSKAPHGAPILFQ

Query:  KKKDGSLRLCIDYRALNKITIKNRYPIPLIADLFDQLGNAQWFSKID
        KKKDGSLRLCIDYRALNKITIKNRYPIPLIADLFDQLG A+WFSKID
Subjt:  KKKDGSLRLCIDYRALNKITIKNRYPIPLIADLFDQLGNAQWFSKID

TrEMBL top hitse value%identityAlignment
A0A1S3B5C5 uncharacterized protein LOC1034861983.6e-7091.84Show/hide
Query:  MKAVETKEAKSDEPPVPDNIQKVLDEYKDIMPAELPKKLPPRREVNHEIELEPGAKPLAMAPYRMALPELEELRRQLKELLDAGYIQPSKAPHGAPILFQ
        MKAVET+EAKSDEPPVP+NIQKVLDEYKDIMPAELP+KLP RREV+HEIELEPGAKP AMAPYRMA PELEELRRQLKELLD GYIQPSKAP+GAP+LFQ
Subjt:  MKAVETKEAKSDEPPVPDNIQKVLDEYKDIMPAELPKKLPPRREVNHEIELEPGAKPLAMAPYRMALPELEELRRQLKELLDAGYIQPSKAPHGAPILFQ

Query:  KKKDGSLRLCIDYRALNKITIKNRYPIPLIADLFDQLGNAQWFSKID
        KKKDGSLRLCIDY ALNKITIKNRYPIPLIADLFDQLGNA+WFSKID
Subjt:  KKKDGSLRLCIDYRALNKITIKNRYPIPLIADLFDQLGNAQWFSKID

A0A1S3BG92 uncharacterized protein LOC1034894991.0e-6989.8Show/hide
Query:  MKAVETKEAKSDEPPVPDNIQKVLDEYKDIMPAELPKKLPPRREVNHEIELEPGAKPLAMAPYRMALPELEELRRQLKELLDAGYIQPSKAPHGAPILFQ
        MK +E ++ K DEPPVPDNIQKVLDEYKDIMP+ELPKKLPPRREV+HEIELEPGAKP AMAPYRMA PELEELRRQLKELLDAGYIQPSKAP+GAP+LFQ
Subjt:  MKAVETKEAKSDEPPVPDNIQKVLDEYKDIMPAELPKKLPPRREVNHEIELEPGAKPLAMAPYRMALPELEELRRQLKELLDAGYIQPSKAPHGAPILFQ

Query:  KKKDGSLRLCIDYRALNKITIKNRYPIPLIADLFDQLGNAQWFSKID
        KKKDGSLRLCIDYRALNKITIKNRYPIPLIADLFDQLG A+WFSKID
Subjt:  KKKDGSLRLCIDYRALNKITIKNRYPIPLIADLFDQLGNAQWFSKID

A0A5A7TCV2 Integrase catalytic domain-containing protein3.6e-7091.84Show/hide
Query:  MKAVETKEAKSDEPPVPDNIQKVLDEYKDIMPAELPKKLPPRREVNHEIELEPGAKPLAMAPYRMALPELEELRRQLKELLDAGYIQPSKAPHGAPILFQ
        MKAVET+EAKSDEPPVP+NIQKVLDEYKDIMPAELP+KLP RREV+HEIELEPGAKP AMAPYRMA PELEELRRQLKELLD GYIQPSKAP+GAP+LFQ
Subjt:  MKAVETKEAKSDEPPVPDNIQKVLDEYKDIMPAELPKKLPPRREVNHEIELEPGAKPLAMAPYRMALPELEELRRQLKELLDAGYIQPSKAPHGAPILFQ

Query:  KKKDGSLRLCIDYRALNKITIKNRYPIPLIADLFDQLGNAQWFSKID
        KKKDGSLRLCIDY ALNKITIKNRYPIPLIADLFDQLGNA+WFSKID
Subjt:  KKKDGSLRLCIDYRALNKITIKNRYPIPLIADLFDQLGNAQWFSKID

A0A5A7THC0 Reverse transcriptase domain-containing protein1.0e-6990.48Show/hide
Query:  MKAVETKEAKSDEPPVPDNIQKVLDEYKDIMPAELPKKLPPRREVNHEIELEPGAKPLAMAPYRMALPELEELRRQLKELLDAGYIQPSKAPHGAPILFQ
        MK +E +EAK+DEPPVPDNIQKVLDEYKDIMP+ELPKKLPPRREV+HEIELEPGAKP AMAPYRMA PELEELRRQLKELLDAGYIQPSKAP+GAP+LFQ
Subjt:  MKAVETKEAKSDEPPVPDNIQKVLDEYKDIMPAELPKKLPPRREVNHEIELEPGAKPLAMAPYRMALPELEELRRQLKELLDAGYIQPSKAPHGAPILFQ

Query:  KKKDGSLRLCIDYRALNKITIKNRYPIPLIADLFDQLGNAQWFSKID
        KKKDGSLRL IDYRALNKITIKNRYPIPLIADLFDQLG A+WFSKID
Subjt:  KKKDGSLRLCIDYRALNKITIKNRYPIPLIADLFDQLGNAQWFSKID

A0A5D3BUU0 Integrase catalytic domain-containing protein7.2e-7192.52Show/hide
Query:  MKAVETKEAKSDEPPVPDNIQKVLDEYKDIMPAELPKKLPPRREVNHEIELEPGAKPLAMAPYRMALPELEELRRQLKELLDAGYIQPSKAPHGAPILFQ
        MKAVET+EAKSDEPPVP+NIQKVLDEYKDIMPAELP+KLP RREV+HEIELEPGAKP AMAPYRMA PELEELRRQLKELLD GYIQPSKAP+GAP+LFQ
Subjt:  MKAVETKEAKSDEPPVPDNIQKVLDEYKDIMPAELPKKLPPRREVNHEIELEPGAKPLAMAPYRMALPELEELRRQLKELLDAGYIQPSKAPHGAPILFQ

Query:  KKKDGSLRLCIDYRALNKITIKNRYPIPLIADLFDQLGNAQWFSKID
        KKKDGSLRLCIDYRALNKITIKNRYPIPLIADLFDQLGNA+WFSKID
Subjt:  KKKDGSLRLCIDYRALNKITIKNRYPIPLIADLFDQLGNAQWFSKID

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein1.6e-1433.09Show/hide
Query:  EPPVPDNIQKVLDEYKDIMPAELPKKLP-PRREVNHEIELEPGAKPLAMAPYRMALPELEELRRQLKELLDAGYIQPSKAPHGAPILFQKKKDGSLRLCI
        EP +PD    +  E+KDI      +KLP P + +  E+EL      L +  Y +   +++ +  ++ + L +G I+ SKA +  P++F  KK+G+LR+ +
Subjt:  EPPVPDNIQKVLDEYKDIMPAELPKKLP-PRREVNHEIELEPGAKPLAMAPYRMALPELEELRRQLKELLDAGYIQPSKAPHGAPILFQKKKDGSLRLCI

Query:  DYRALNKITIKNRYPIPLIADLFDQLGNAQWFSKID
        DY+ LNK    N YP+PLI  L  ++  +  F+K+D
Subjt:  DYRALNKITIKNRYPIPLIADLFDQLGNAQWFSKID

P0CT41 Transposon Tf2-12 polyprotein1.6e-1433.09Show/hide
Query:  EPPVPDNIQKVLDEYKDIMPAELPKKLP-PRREVNHEIELEPGAKPLAMAPYRMALPELEELRRQLKELLDAGYIQPSKAPHGAPILFQKKKDGSLRLCI
        EP +PD    +  E+KDI      +KLP P + +  E+EL      L +  Y +   +++ +  ++ + L +G I+ SKA +  P++F  KK+G+LR+ +
Subjt:  EPPVPDNIQKVLDEYKDIMPAELPKKLP-PRREVNHEIELEPGAKPLAMAPYRMALPELEELRRQLKELLDAGYIQPSKAPHGAPILFQKKKDGSLRLCI

Query:  DYRALNKITIKNRYPIPLIADLFDQLGNAQWFSKID
        DY+ LNK    N YP+PLI  L  ++  +  F+K+D
Subjt:  DYRALNKITIKNRYPIPLIADLFDQLGNAQWFSKID

Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein5.0e-2138.71Show/hide
Query:  EYKDIMPAELPKKLPPRRE--VNHEIELEPGAKPLAMAPYRMALPELEELRRQLKELLDAGYIQPSKAPHGAPILFQKKKDGSLRLCIDYRALNKITIKN
        +Y++I+  +LP +        V H+IE++PGA+   + PY +     +E+ + +++LLD  +I PSK+P  +P++   KKDG+ RLC+DYR LNK TI +
Subjt:  EYKDIMPAELPKKLPPRRE--VNHEIELEPGAKPLAMAPYRMALPELEELRRQLKELLDAGYIQPSKAPHGAPILFQKKKDGSLRLCIDYRALNKITIKN

Query:  RYPIPLIADLFDQLGNAQWFSKID
         +P+P I +L  ++GNAQ F+ +D
Subjt:  RYPIPLIADLFDQLGNAQWFSKID

Q99315 Transposon Ty3-G Gag-Pol polyprotein5.0e-2138.71Show/hide
Query:  EYKDIMPAELPKKLPPRRE--VNHEIELEPGAKPLAMAPYRMALPELEELRRQLKELLDAGYIQPSKAPHGAPILFQKKKDGSLRLCIDYRALNKITIKN
        +Y++I+  +LP +        V H+IE++PGA+   + PY +     +E+ + +++LLD  +I PSK+P  +P++   KKDG+ RLC+DYR LNK TI +
Subjt:  EYKDIMPAELPKKLPPRRE--VNHEIELEPGAKPLAMAPYRMALPELEELRRQLKELLDAGYIQPSKAPHGAPILFQKKKDGSLRLCIDYRALNKITIKN

Query:  RYPIPLIADLFDQLGNAQWFSKID
         +P+P I +L  ++GNAQ F+ +D
Subjt:  RYPIPLIADLFDQLGNAQWFSKID

Q9UR07 Transposon Tf2-11 polyprotein1.6e-1433.09Show/hide
Query:  EPPVPDNIQKVLDEYKDIMPAELPKKLP-PRREVNHEIELEPGAKPLAMAPYRMALPELEELRRQLKELLDAGYIQPSKAPHGAPILFQKKKDGSLRLCI
        EP +PD    +  E+KDI      +KLP P + +  E+EL      L +  Y +   +++ +  ++ + L +G I+ SKA +  P++F  KK+G+LR+ +
Subjt:  EPPVPDNIQKVLDEYKDIMPAELPKKLP-PRREVNHEIELEPGAKPLAMAPYRMALPELEELRRQLKELLDAGYIQPSKAPHGAPILFQKKKDGSLRLCI

Query:  DYRALNKITIKNRYPIPLIADLFDQLGNAQWFSKID
        DY+ LNK    N YP+PLI  L  ++  +  F+K+D
Subjt:  DYRALNKITIKNRYPIPLIADLFDQLGNAQWFSKID

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGCCGTAGAAACCAAGGAAGCAAAATCTGATGAGCCTCCGGTACCAGACAACATACAGAAGGTCCTTGACGAGTACAAGGACATAATGCCTGCAGAGCTGCCAAA
GAAACTTCCCCCAAGAAGGGAAGTAAACCACGAAATTGAACTAGAACCAGGAGCTAAACCACTTGCCATGGCTCCTTATCGGATGGCCCTTCCAGAACTTGAGGAGTTAC
GAAGACAGTTGAAAGAACTCCTCGATGCCGGATATATACAACCGTCAAAGGCCCCCCATGGTGCTCCAATACTCTTCCAGAAGAAGAAGGACGGTTCGTTGAGACTTTGT
ATAGACTACAGGGCTCTTAACAAGATCACTATCAAGAACAGGTACCCCATCCCTCTTATTGCTGACCTTTTCGACCAGCTAGGAAATGCCCAATGGTTTAGCAAGATCGA
TCGGGTATTACCAGGTCAGAATAAAGCAAGGGGACGAAGCAAAGACTGCGTGTGTGACCAGGTATGGTGCTTATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGCCGTAGAAACCAAGGAAGCAAAATCTGATGAGCCTCCGGTACCAGACAACATACAGAAGGTCCTTGACGAGTACAAGGACATAATGCCTGCAGAGCTGCCAAA
GAAACTTCCCCCAAGAAGGGAAGTAAACCACGAAATTGAACTAGAACCAGGAGCTAAACCACTTGCCATGGCTCCTTATCGGATGGCCCTTCCAGAACTTGAGGAGTTAC
GAAGACAGTTGAAAGAACTCCTCGATGCCGGATATATACAACCGTCAAAGGCCCCCCATGGTGCTCCAATACTCTTCCAGAAGAAGAAGGACGGTTCGTTGAGACTTTGT
ATAGACTACAGGGCTCTTAACAAGATCACTATCAAGAACAGGTACCCCATCCCTCTTATTGCTGACCTTTTCGACCAGCTAGGAAATGCCCAATGGTTTAGCAAGATCGA
TCGGGTATTACCAGGTCAGAATAAAGCAAGGGGACGAAGCAAAGACTGCGTGTGTGACCAGGTATGGTGCTTATGA
Protein sequenceShow/hide protein sequence
MKAVETKEAKSDEPPVPDNIQKVLDEYKDIMPAELPKKLPPRREVNHEIELEPGAKPLAMAPYRMALPELEELRRQLKELLDAGYIQPSKAPHGAPILFQKKKDGSLRLC
IDYRALNKITIKNRYPIPLIADLFDQLGNAQWFSKIDRVLPGQNKARGRSKDCVCDQVWCL