| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0032318.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 4.0e-59 | 78.38 | Show/hide |
Query: MFLKFKAEIENQLGKRIKRLRSNRGGEYSDKSLEEFCESNGITHEFTTPYSPQQNCIVEWKNITLKKMMNAMLLSYGLSNNMWGEAVLSACFLFNNVPHR
MF+KFKAE ENQLGKRIKRLRS+RGGEYSDK+L+EFCESNGI HEFT PYSPQQN I E KN TLK+MMNAMLLS GLS+NMWGEAVLSACF+ N +PH+
Subjt: MFLKFKAEIENQLGKRIKRLRSNRGGEYSDKSLEEFCESNGITHEFTTPYSPQQNCIVEWKNITLKKMMNAMLLSYGLSNNMWGEAVLSACFLFNNVPHR
Query: KLDKTSHELWKEYAPNRSYLRVKGCLAKVSHPALKKSIVGSKTFDYIF
+LDKT +ELWK YAPN SYL+V GCLAKV PALKK+ VG KTFD IF
Subjt: KLDKTSHELWKEYAPNRSYLRVKGCLAKVSHPALKKSIVGSKTFDYIF
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| KAA0043346.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 1.2e-58 | 77.7 | Show/hide |
Query: MFLKFKAEIENQLGKRIKRLRSNRGGEYSDKSLEEFCESNGITHEFTTPYSPQQNCIVEWKNITLKKMMNAMLLSYGLSNNMWGEAVLSACFLFNNVPHR
MF+KFKAE ENQLGKRIKRLRS+RGGEYSDK+L+EFCESNGI HEFT PYSPQQN I E KN TLK+MMNAMLLS GLS+NMWGEAVLSACF+ N +PH+
Subjt: MFLKFKAEIENQLGKRIKRLRSNRGGEYSDKSLEEFCESNGITHEFTTPYSPQQNCIVEWKNITLKKMMNAMLLSYGLSNNMWGEAVLSACFLFNNVPHR
Query: KLDKTSHELWKEYAPNRSYLRVKGCLAKVSHPALKKSIVGSKTFDYIF
+LDKT +ELWK +APN SYL+V GCLAKV PALKK++VG KTFD IF
Subjt: KLDKTSHELWKEYAPNRSYLRVKGCLAKVSHPALKKSIVGSKTFDYIF
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| KAA0044881.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 1.4e-59 | 78.38 | Show/hide |
Query: MFLKFKAEIENQLGKRIKRLRSNRGGEYSDKSLEEFCESNGITHEFTTPYSPQQNCIVEWKNITLKKMMNAMLLSYGLSNNMWGEAVLSACFLFNNVPHR
MFLKFKAE ENQLGKRIKRLRS+RGGEYSDK+L+EFCESNGI HEFT YSPQQN I E KN TLK+MMNAMLLS+GLS+NMWGEAVLSACF+ N +PH+
Subjt: MFLKFKAEIENQLGKRIKRLRSNRGGEYSDKSLEEFCESNGITHEFTTPYSPQQNCIVEWKNITLKKMMNAMLLSYGLSNNMWGEAVLSACFLFNNVPHR
Query: KLDKTSHELWKEYAPNRSYLRVKGCLAKVSHPALKKSIVGSKTFDYIF
+LDKT +ELWK +APN SYL+V GCLAKV PALKK+ VGSKTFD IF
Subjt: KLDKTSHELWKEYAPNRSYLRVKGCLAKVSHPALKKSIVGSKTFDYIF
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| KAA0056761.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 1.5e-58 | 77.7 | Show/hide |
Query: MFLKFKAEIENQLGKRIKRLRSNRGGEYSDKSLEEFCESNGITHEFTTPYSPQQNCIVEWKNITLKKMMNAMLLSYGLSNNMWGEAVLSACFLFNNVPHR
MF+KFKAE ENQLGKRIKRLRS+RGGEYSDK+L+EFCESNGI HEFT PYSPQQN I E KN TLK+MMNAMLLS GLS+NMWGEAVLSACF+ N +PH+
Subjt: MFLKFKAEIENQLGKRIKRLRSNRGGEYSDKSLEEFCESNGITHEFTTPYSPQQNCIVEWKNITLKKMMNAMLLSYGLSNNMWGEAVLSACFLFNNVPHR
Query: KLDKTSHELWKEYAPNRSYLRVKGCLAKVSHPALKKSIVGSKTFDYIF
+LDKT +ELWK +APN SYL+V GCLAKV PALKK+ VG KTFD IF
Subjt: KLDKTSHELWKEYAPNRSYLRVKGCLAKVSHPALKKSIVGSKTFDYIF
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| TYK06518.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 1.5e-58 | 77.7 | Show/hide |
Query: MFLKFKAEIENQLGKRIKRLRSNRGGEYSDKSLEEFCESNGITHEFTTPYSPQQNCIVEWKNITLKKMMNAMLLSYGLSNNMWGEAVLSACFLFNNVPHR
MF+KFKAE ENQLGKRIKRLRS+RGGEYSDK+L+EFCESNGI HEFT PYSPQQN I E KN TLK+MMNAMLLS GLS+NMWGEAVLSACF+ N +PH+
Subjt: MFLKFKAEIENQLGKRIKRLRSNRGGEYSDKSLEEFCESNGITHEFTTPYSPQQNCIVEWKNITLKKMMNAMLLSYGLSNNMWGEAVLSACFLFNNVPHR
Query: KLDKTSHELWKEYAPNRSYLRVKGCLAKVSHPALKKSIVGSKTFDYIF
+LDKT +ELWK +APN SYL+V GCLAKV PALKK+ VG KTFD IF
Subjt: KLDKTSHELWKEYAPNRSYLRVKGCLAKVSHPALKKSIVGSKTFDYIF
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SP23 Ty1-copia retrotransposon protein | 2.0e-59 | 78.38 | Show/hide |
Query: MFLKFKAEIENQLGKRIKRLRSNRGGEYSDKSLEEFCESNGITHEFTTPYSPQQNCIVEWKNITLKKMMNAMLLSYGLSNNMWGEAVLSACFLFNNVPHR
MF+KFKAE ENQLGKRIKRLRS+RGGEYSDK+L+EFCESNGI HEFT PYSPQQN I E KN TLK+MMNAMLLS GLS+NMWGEAVLSACF+ N +PH+
Subjt: MFLKFKAEIENQLGKRIKRLRSNRGGEYSDKSLEEFCESNGITHEFTTPYSPQQNCIVEWKNITLKKMMNAMLLSYGLSNNMWGEAVLSACFLFNNVPHR
Query: KLDKTSHELWKEYAPNRSYLRVKGCLAKVSHPALKKSIVGSKTFDYIF
+LDKT +ELWK YAPN SYL+V GCLAKV PALKK+ VG KTFD IF
Subjt: KLDKTSHELWKEYAPNRSYLRVKGCLAKVSHPALKKSIVGSKTFDYIF
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| A0A5A7TMS2 Ty1-copia retrotransposon protein | 5.7e-59 | 77.7 | Show/hide |
Query: MFLKFKAEIENQLGKRIKRLRSNRGGEYSDKSLEEFCESNGITHEFTTPYSPQQNCIVEWKNITLKKMMNAMLLSYGLSNNMWGEAVLSACFLFNNVPHR
MF+KFKAE ENQLGKRIKRLRS+RGGEYSDK+L+EFCESNGI HEFT PYSPQQN I E KN TLK+MMNAMLLS GLS+NMWGEAVLSACF+ N +PH+
Subjt: MFLKFKAEIENQLGKRIKRLRSNRGGEYSDKSLEEFCESNGITHEFTTPYSPQQNCIVEWKNITLKKMMNAMLLSYGLSNNMWGEAVLSACFLFNNVPHR
Query: KLDKTSHELWKEYAPNRSYLRVKGCLAKVSHPALKKSIVGSKTFDYIF
+LDKT +ELWK +APN SYL+V GCLAKV PALKK++VG KTFD IF
Subjt: KLDKTSHELWKEYAPNRSYLRVKGCLAKVSHPALKKSIVGSKTFDYIF
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| A0A5A7TTN4 Ty1-copia retrotransposon protein | 6.7e-60 | 78.38 | Show/hide |
Query: MFLKFKAEIENQLGKRIKRLRSNRGGEYSDKSLEEFCESNGITHEFTTPYSPQQNCIVEWKNITLKKMMNAMLLSYGLSNNMWGEAVLSACFLFNNVPHR
MFLKFKAE ENQLGKRIKRLRS+RGGEYSDK+L+EFCESNGI HEFT YSPQQN I E KN TLK+MMNAMLLS+GLS+NMWGEAVLSACF+ N +PH+
Subjt: MFLKFKAEIENQLGKRIKRLRSNRGGEYSDKSLEEFCESNGITHEFTTPYSPQQNCIVEWKNITLKKMMNAMLLSYGLSNNMWGEAVLSACFLFNNVPHR
Query: KLDKTSHELWKEYAPNRSYLRVKGCLAKVSHPALKKSIVGSKTFDYIF
+LDKT +ELWK +APN SYL+V GCLAKV PALKK+ VGSKTFD IF
Subjt: KLDKTSHELWKEYAPNRSYLRVKGCLAKVSHPALKKSIVGSKTFDYIF
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| A0A5D3DJE2 Ty1-copia retrotransposon protein | 7.4e-59 | 77.7 | Show/hide |
Query: MFLKFKAEIENQLGKRIKRLRSNRGGEYSDKSLEEFCESNGITHEFTTPYSPQQNCIVEWKNITLKKMMNAMLLSYGLSNNMWGEAVLSACFLFNNVPHR
MF+KFKAE ENQLGKRIKRLRS+RGGEYSDK+L+EFCESNGI HEFT PYSPQQN I E KN TLK+MMNAMLLS GLS+NMWGEAVLSACF+ N +PH+
Subjt: MFLKFKAEIENQLGKRIKRLRSNRGGEYSDKSLEEFCESNGITHEFTTPYSPQQNCIVEWKNITLKKMMNAMLLSYGLSNNMWGEAVLSACFLFNNVPHR
Query: KLDKTSHELWKEYAPNRSYLRVKGCLAKVSHPALKKSIVGSKTFDYIF
+LDKT +ELWK +APN SYL+V GCLAKV PALKK+ VG KTFD IF
Subjt: KLDKTSHELWKEYAPNRSYLRVKGCLAKVSHPALKKSIVGSKTFDYIF
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| A0A5D3DSQ3 Ty1-copia retrotransposon protein | 7.4e-59 | 77.7 | Show/hide |
Query: MFLKFKAEIENQLGKRIKRLRSNRGGEYSDKSLEEFCESNGITHEFTTPYSPQQNCIVEWKNITLKKMMNAMLLSYGLSNNMWGEAVLSACFLFNNVPHR
MF+KFKAE ENQLGKRIKRLRS+RGGEYSDK+L+EFCESNGI HEFT PYSPQQN I E KN TLK+MMNAMLLS GLS+NMWGEAVLSACF+ N +PH+
Subjt: MFLKFKAEIENQLGKRIKRLRSNRGGEYSDKSLEEFCESNGITHEFTTPYSPQQNCIVEWKNITLKKMMNAMLLSYGLSNNMWGEAVLSACFLFNNVPHR
Query: KLDKTSHELWKEYAPNRSYLRVKGCLAKVSHPALKKSIVGSKTFDYIF
+LDKT +ELWK +APN SYL+V GCLAKV PALKK+ VG KTFD IF
Subjt: KLDKTSHELWKEYAPNRSYLRVKGCLAKVSHPALKKSIVGSKTFDYIF
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 2.8e-15 | 33.11 | Show/hide |
Query: MFLKFKAEIENQLGKRIKRLRSNRGGEYSDKSLEEFCESNGITHEFTTPYSPQQNCIVEWKNITLKKMMNAMLLSYGLSNNMWGEAVLSACFLFNNVPHR
MF F A+ E ++ L + G EY + +FC GI++ T P++PQ N + E T+ + M+ L + WGEAVL+A +L N +P R
Subjt: MFLKFKAEIENQLGKRIKRLRSNRGGEYSDKSLEEFCESNGITHEFTTPYSPQQNCIVEWKNITLKKMMNAMLLSYGLSNNMWGEAVLSACFLFNNVPHR
Query: KL---DKTSHELWKEYAPNRSYLRVKGCLAKVSHPALKKSIVGSKTFDYIF
L KT +E+W P +LRV G V H K+ K+F IF
Subjt: KL---DKTSHELWKEYAPNRSYLRVKGCLAKVSHPALKKSIVGSKTFDYIF
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.8e-22 | 37.58 | Show/hide |
Query: MFLKFKAEIENQLGKRIKRLRSNRGGEYSDKSLEEFCESNGITHEFTTPYSPQQNCIVEWKNITLKKMMNAMLLSYGLSNNMWGEAVLSACFLFNNVPHR
+F KF A +E + G+++KRLRS+ GGEY+ + EE+C S+GI HE T P +PQ N + E N T+ + + +ML L + WGEAV +AC+L N P
Subjt: MFLKFKAEIENQLGKRIKRLRSNRGGEYSDKSLEEFCESNGITHEFTTPYSPQQNCIVEWKNITLKKMMNAMLLSYGLSNNMWGEAVLSACFLFNNVPHR
Query: KLD-KTSHELWKEYAPNRSYLRVKGCLAKVSHPALKKSIVGSKTFDYIF
L + +W + S+L+V GC A P +++ + K+ IF
Subjt: KLD-KTSHELWKEYAPNRSYLRVKGCLAKVSHPALKKSIVGSKTFDYIF
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| P25384 Transposon Ty2-C Gag-Pol polyprotein | 2.9e-07 | 30.56 | Show/hide |
Query: MFLKFKAEIENQLGKRIKRLRSNRGGEYSDKSLEEFCESNGITHEFTTPYSPQQNCIVEWKNITLKKMMNAMLLSYGLSNNMWGEAVLSACFLFNNVPHR
+F A I+NQ R+ ++ +RG EY++K+L +F + GIT +TT + + + E N TL +L GL N++W AV + + N++
Subjt: MFLKFKAEIENQLGKRIKRLRSNRGGEYSDKSLEEFCESNGITHEFTTPYSPQQNCIVEWKNITLKKMMNAMLLSYGLSNNMWGEAVLSACFLFNNVPHR
Query: KLDKTSHE
K DK++ +
Subjt: KLDKTSHE
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| Q12472 Transposon Ty2-DR1 Gag-Pol polyprotein | 2.9e-07 | 30.56 | Show/hide |
Query: MFLKFKAEIENQLGKRIKRLRSNRGGEYSDKSLEEFCESNGITHEFTTPYSPQQNCIVEWKNITLKKMMNAMLLSYGLSNNMWGEAVLSACFLFNNVPHR
+F A I+NQ R+ ++ +RG EY++K+L +F + GIT +TT + + + E N TL +L GL N++W AV + + N++
Subjt: MFLKFKAEIENQLGKRIKRLRSNRGGEYSDKSLEEFCESNGITHEFTTPYSPQQNCIVEWKNITLKKMMNAMLLSYGLSNNMWGEAVLSACFLFNNVPHR
Query: KLDKTSHE
K DK++ +
Subjt: KLDKTSHE
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| Q12491 Transposon Ty2-B Gag-Pol polyprotein | 2.9e-07 | 30.56 | Show/hide |
Query: MFLKFKAEIENQLGKRIKRLRSNRGGEYSDKSLEEFCESNGITHEFTTPYSPQQNCIVEWKNITLKKMMNAMLLSYGLSNNMWGEAVLSACFLFNNVPHR
+F A I+NQ R+ ++ +RG EY++K+L +F + GIT +TT + + + E N TL +L GL N++W AV + + N++
Subjt: MFLKFKAEIENQLGKRIKRLRSNRGGEYSDKSLEEFCESNGITHEFTTPYSPQQNCIVEWKNITLKKMMNAMLLSYGLSNNMWGEAVLSACFLFNNVPHR
Query: KLDKTSHE
K DK++ +
Subjt: KLDKTSHE
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