CuGenDBv2

Gene ID	Cmc08g0227941
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Genome location	CMiso1.1chr08:21488800..21490854
RNA-Seq Expression	Cmc08g0227941
Synteny	Cmc08g0227941
Gene Ontology terms	GO:0006278 - RNA-dependent DNA biosynthetic process (biological process) GO:0006355 - regulation of transcription, DNA-templated (biological process) GO:0006508 - proteolysis (biological process) GO:0015074 - DNA integration (biological process) GO:0043565 - sequence-specific DNA binding (molecular function) GO:0003700 - DNA-binding transcription factor activity (molecular function) GO:0008270 - zinc ion binding (molecular function) GO:0004190 - aspartic-type endopeptidase activity (molecular function) GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domains	IPR043502 - DNA/RNA polymerase superfamily IPR043128 - Reverse transcriptase/Diguanylate cyclase domain IPR041588 - Integrase zinc-binding domain IPR041373 - Reverse transcriptase, RNase H-like domain IPR000477 - Reverse transcriptase domain IPR001584 - Integrase, catalytic core IPR012337 - Ribonuclease H-like superfamily IPR036397 - Ribonuclease H superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0048687.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

98.1

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
        TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE+HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFIWSKACEDSFQNLKQKLVTTPVLTVPDGSGSFVIYSDASKKDL
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPF+WSKACEDSFQNLKQKLVT PVLTVPDGSGSFVIYSDASKK L
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFIWSKACEDSFQNLKQKLVTTPVLTVPDGSGSFVIYSDASKKDL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGNANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPG ANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGNANVVADA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRVLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKT
        LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKR LAEAGQAVEFSLSSDGGLLFERRLCVPSDS VKT
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRVLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSIDFITGLPRTLRGFTVIWVVVDRLT
        ELLSEAHSSPFSMHPGSTKMY+D+KRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVS+DFITGLPRTLRGFTVIWVVVDRLT
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSIDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHLQTDGQTERLNQVLEDML
        KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWK LQTAMGTRLDFSTAFH QTDGQTERLNQVLE ML
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHLQTDGQTERLNQVLEDML

KAA0051357.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

97.51

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
        MAPAELKELKVQLQELLDKGFIRP+VSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGY+QLRIKDEDVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
        TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE+HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKA 
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFIWSKACEDSFQNLKQKLVTTPVLTVPDGSGSFVIYSDASKKDL
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPF+WSKACEDSFQNLKQKLVT PVLTVPDGSGSFVIYSDASKK L
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFIWSKACEDSFQNLKQKLVTTPVLTVPDGSGSFVIYSDASKKDL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGNANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPG ANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGNANVVADA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRVLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKT
        LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKR LAEAGQAVEFSLSSDGGL FE RLCVPSDSAVKT
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRVLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSIDFITGLPRTLRGFTVIWVVVDRLT
        ELL EAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS+CLVCQQVK PRQKPAGLLQPLSIPEWKWENVS+DFITGLPRTLRGFTVIWVVVDRLT
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSIDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHLQTDGQTERLNQVLEDML
        KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFH Q DGQTERLNQVLEDML
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHLQTDGQTERLNQVLEDML

KAA0057672.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

97.66

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG HQLRIKDEDVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
        TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE+HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFIWSKACEDSFQNLKQKLVTTPVLTVPDGSGSFVIYSDASKKDL
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR ATPLTQLTRKGAPF+WSKACEDSFQNLKQKLVT PVLTVPDGSGSFVIYSDASKK L
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFIWSKACEDSFQNLKQKLVTTPVLTVPDGSGSFVIYSDASKKDL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGNANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPG ANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGNANVVADA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRVLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKT
        LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKR LAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKT
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRVLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSIDFITGLPRTLRGFTVIWVVVDRLT
        ELL+EAHSSPFSMHPGSTKMYQDLKR+YWWRNMKREVAEFVS+CLVCQQVKAPRQKPAGLLQPLSIPEWKWENVS+DFI GLPRTLRGFTVIWVVVDRLT
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSIDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHLQTDGQTERLNQVLEDML
        KSAHFVPGKSTYT SKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFH QTDGQTERLN+VLEDML
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHLQTDGQTERLNQVLEDML

KAA0062112.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

98.1

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
        MAPAELKELKVQLQELLDKGFIRPSVSP GAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
        TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSK G
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFIWSKACEDSFQNLKQKLVTTPVLTVPDGSGSFVIYSDASKKDL
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPF+WSKACEDSFQNLKQKLVT PVLTVPDGSGSFVIYSD SKK L
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFIWSKACEDSFQNLKQKLVTTPVLTVPDGSGSFVIYSDASKKDL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGNANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPG ANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGNANVVADA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRVLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKT
        LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKR LAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKT
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRVLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSIDFITGLPRTLRGFTVIWVVVDRLT
        ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVS+DFITGLPRTLRGFTVIWVVVDRLT
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSIDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHLQTDGQTERLNQVLEDML
        KSAHFVPGKSTYT+SKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQT+MGTRLDFSTAFH QTDGQTERLNQVLEDML
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHLQTDGQTERLNQVLEDML

TYK01613.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

98.25

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
        TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE+HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFIWSKACEDSFQNLKQKLVTTPVLTVPDGSGSFVIYSDASKKDL
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPF+WSKACEDSFQ LKQKLVT PVLTVPDGSGSFVIYSDASKK L
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFIWSKACEDSFQNLKQKLVTTPVLTVPDGSGSFVIYSDASKKDL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGNANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPG ANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGNANVVADA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRVLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKT
        LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKR LAEAGQ  EFSLSSDGGLLFERRLCVPSDSAVKT
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRVLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSIDFITGLPRTLRGFTVIWVVVDRLT
        ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS+CLVCQQVKAPRQKPAGLLQPLSIPEWKWENVS+DFITGLPRTLRGFTVIWVVVDRLT
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSIDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHLQTDGQTERLNQVLEDML
        KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFH QTDGQTERLNQVLEDML
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHLQTDGQTERLNQVLEDML

TrEMBL top hits

e value

%identity

Alignment

A0A5A7U330 Reverse transcriptase

0.0e+00

98.1

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
        TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE+HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFIWSKACEDSFQNLKQKLVTTPVLTVPDGSGSFVIYSDASKKDL
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPF+WSKACEDSFQNLKQKLVT PVLTVPDGSGSFVIYSDASKK L
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFIWSKACEDSFQNLKQKLVTTPVLTVPDGSGSFVIYSDASKKDL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGNANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPG ANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGNANVVADA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRVLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKT
        LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKR LAEAGQAVEFSLSSDGGLLFERRLCVPSDS VKT
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRVLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSIDFITGLPRTLRGFTVIWVVVDRLT
        ELLSEAHSSPFSMHPGSTKMY+D+KRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVS+DFITGLPRTLRGFTVIWVVVDRLT
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSIDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHLQTDGQTERLNQVLEDML
        KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWK LQTAMGTRLDFSTAFH QTDGQTERLNQVLE ML
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHLQTDGQTERLNQVLEDML

A0A5A7UAA8 Reverse transcriptase

0.0e+00

97.51

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
        MAPAELKELKVQLQELLDKGFIRP+VSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGY+QLRIKDEDVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
        TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE+HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKA 
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFIWSKACEDSFQNLKQKLVTTPVLTVPDGSGSFVIYSDASKKDL
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPF+WSKACEDSFQNLKQKLVT PVLTVPDGSGSFVIYSDASKK L
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFIWSKACEDSFQNLKQKLVTTPVLTVPDGSGSFVIYSDASKKDL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGNANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPG ANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGNANVVADA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRVLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKT
        LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKR LAEAGQAVEFSLSSDGGL FE RLCVPSDSAVKT
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRVLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSIDFITGLPRTLRGFTVIWVVVDRLT
        ELL EAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS+CLVCQQVK PRQKPAGLLQPLSIPEWKWENVS+DFITGLPRTLRGFTVIWVVVDRLT
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSIDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHLQTDGQTERLNQVLEDML
        KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFH Q DGQTERLNQVLEDML
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHLQTDGQTERLNQVLEDML

A0A5A7UP94 Pol protein

0.0e+00

97.66

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG HQLRIKDEDVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
        TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE+HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFIWSKACEDSFQNLKQKLVTTPVLTVPDGSGSFVIYSDASKKDL
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR ATPLTQLTRKGAPF+WSKACEDSFQNLKQKLVT PVLTVPDGSGSFVIYSDASKK L
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFIWSKACEDSFQNLKQKLVTTPVLTVPDGSGSFVIYSDASKKDL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGNANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPG ANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGNANVVADA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRVLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKT
        LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKR LAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKT
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRVLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSIDFITGLPRTLRGFTVIWVVVDRLT
        ELL+EAHSSPFSMHPGSTKMYQDLKR+YWWRNMKREVAEFVS+CLVCQQVKAPRQKPAGLLQPLSIPEWKWENVS+DFI GLPRTLRGFTVIWVVVDRLT
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSIDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHLQTDGQTERLNQVLEDML
        KSAHFVPGKSTYT SKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFH QTDGQTERLN+VLEDML
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHLQTDGQTERLNQVLEDML

A0A5A7V1N3 Reverse transcriptase

0.0e+00

98.1

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
        MAPAELKELKVQLQELLDKGFIRPSVSP GAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
        TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSK G
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFIWSKACEDSFQNLKQKLVTTPVLTVPDGSGSFVIYSDASKKDL
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPF+WSKACEDSFQNLKQKLVT PVLTVPDGSGSFVIYSD SKK L
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFIWSKACEDSFQNLKQKLVTTPVLTVPDGSGSFVIYSDASKKDL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGNANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPG ANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGNANVVADA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRVLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKT
        LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKR LAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKT
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRVLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSIDFITGLPRTLRGFTVIWVVVDRLT
        ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVS+DFITGLPRTLRGFTVIWVVVDRLT
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSIDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHLQTDGQTERLNQVLEDML
        KSAHFVPGKSTYT+SKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQT+MGTRLDFSTAFH QTDGQTERLNQVLEDML
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHLQTDGQTERLNQVLEDML

A0A5D3BPI1 Reverse transcriptase

0.0e+00

98.25

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
        TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE+HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFIWSKACEDSFQNLKQKLVTTPVLTVPDGSGSFVIYSDASKKDL
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPF+WSKACEDSFQ LKQKLVT PVLTVPDGSGSFVIYSDASKK L
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFIWSKACEDSFQNLKQKLVTTPVLTVPDGSGSFVIYSDASKKDL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGNANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPG ANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGNANVVADA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRVLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKT
        LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKR LAEAGQ  EFSLSSDGGLLFERRLCVPSDSAVKT
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRVLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSIDFITGLPRTLRGFTVIWVVVDRLT
        ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS+CLVCQQVKAPRQKPAGLLQPLSIPEWKWENVS+DFITGLPRTLRGFTVIWVVVDRLT
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSIDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHLQTDGQTERLNQVLEDML
        KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFH QTDGQTERLNQVLEDML
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHLQTDGQTERLNQVLEDML

SwissProt top hits

e value

%identity

Alignment

P0CT34 Transposon Tf2-1 polyprotein

2.5e-119

34.1

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
        + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++  D  K
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
         AFR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH KH++ VLQ L++  L    +KCEF   QV F+G+ +S+ G
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFIWSKACEDSFQNLKQKLVTTPVLTVPDGSGSFVIYSDASKKDL
         +     I+ V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFIWSKACEDSFQNLKQKLVTTPVLTVPDGSGSFVIYSDASKKDL

Query:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP
        G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y P
Subjt:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP

Query:  GNANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRVLAEAGQAVEFSLSSDGGLLFERR--
        G+AN +ADALSR       ++    P+ +D E   I          + Q+++    + +++   +ND  L+   +L    + VE ++    GLL   +  
Subjt:  GNANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRVLAEAGQAVEFSLSSDGGLLFERR--

Query:  LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSIDFITGLPRTLRGF
        + +P+D+ +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++S+DFIT LP +  G+
Subjt:  LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSIDFITGLPRTLRGF

Query:  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHLQTDGQTERLNQVLEDML
          ++VVVDR +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  +  QTDGQTER NQ +E +L
Subjt:  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHLQTDGQTERLNQVLEDML

P0CT35 Transposon Tf2-2 polyprotein

2.5e-119

34.1

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
        + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++  D  K
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
         AFR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH KH++ VLQ L++  L    +KCEF   QV F+G+ +S+ G
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFIWSKACEDSFQNLKQKLVTTPVLTVPDGSGSFVIYSDASKKDL
         +     I+ V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFIWSKACEDSFQNLKQKLVTTPVLTVPDGSGSFVIYSDASKKDL

Query:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP
        G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y P
Subjt:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP

Query:  GNANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRVLAEAGQAVEFSLSSDGGLLFERR--
        G+AN +ADALSR       ++    P+ +D E   I          + Q+++    + +++   +ND  L+   +L    + VE ++    GLL   +  
Subjt:  GNANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRVLAEAGQAVEFSLSSDGGLLFERR--

Query:  LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSIDFITGLPRTLRGF
        + +P+D+ +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++S+DFIT LP +  G+
Subjt:  LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSIDFITGLPRTLRGF

Query:  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHLQTDGQTERLNQVLEDML
          ++VVVDR +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  +  QTDGQTER NQ +E +L
Subjt:  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHLQTDGQTERLNQVLEDML

P0CT36 Transposon Tf2-3 polyprotein

2.5e-119

34.1

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
        + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++  D  K
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
         AFR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH KH++ VLQ L++  L    +KCEF   QV F+G+ +S+ G
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFIWSKACEDSFQNLKQKLVTTPVLTVPDGSGSFVIYSDASKKDL
         +     I+ V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFIWSKACEDSFQNLKQKLVTTPVLTVPDGSGSFVIYSDASKKDL

Query:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP
        G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y P
Subjt:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP

Query:  GNANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRVLAEAGQAVEFSLSSDGGLLFERR--
        G+AN +ADALSR       ++    P+ +D E   I          + Q+++    + +++   +ND  L+   +L    + VE ++    GLL   +  
Subjt:  GNANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRVLAEAGQAVEFSLSSDGGLLFERR--

Query:  LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSIDFITGLPRTLRGF
        + +P+D+ +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++S+DFIT LP +  G+
Subjt:  LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSIDFITGLPRTLRGF

Query:  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHLQTDGQTERLNQVLEDML
          ++VVVDR +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  +  QTDGQTER NQ +E +L
Subjt:  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHLQTDGQTERLNQVLEDML

P0CT37 Transposon Tf2-4 polyprotein

2.5e-119

34.1

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
        + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++  D  K
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
         AFR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH KH++ VLQ L++  L    +KCEF   QV F+G+ +S+ G
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFIWSKACEDSFQNLKQKLVTTPVLTVPDGSGSFVIYSDASKKDL
         +     I+ V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFIWSKACEDSFQNLKQKLVTTPVLTVPDGSGSFVIYSDASKKDL

Query:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP
        G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y P
Subjt:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP

Query:  GNANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRVLAEAGQAVEFSLSSDGGLLFERR--
        G+AN +ADALSR       ++    P+ +D E   I          + Q+++    + +++   +ND  L+   +L    + VE ++    GLL   +  
Subjt:  GNANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRVLAEAGQAVEFSLSSDGGLLFERR--

Query:  LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSIDFITGLPRTLRGF
        + +P+D+ +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++S+DFIT LP +  G+
Subjt:  LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSIDFITGLPRTLRGF

Query:  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHLQTDGQTERLNQVLEDML
          ++VVVDR +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  +  QTDGQTER NQ +E +L
Subjt:  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHLQTDGQTERLNQVLEDML

P0CT41 Transposon Tf2-12 polyprotein

2.5e-119

34.1

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
        + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++  D  K
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
         AFR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH KH++ VLQ L++  L    +KCEF   QV F+G+ +S+ G
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFIWSKACEDSFQNLKQKLVTTPVLTVPDGSGSFVIYSDASKKDL
         +     I+ V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFIWSKACEDSFQNLKQKLVTTPVLTVPDGSGSFVIYSDASKKDL

Query:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP
        G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y P
Subjt:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP

Query:  GNANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRVLAEAGQAVEFSLSSDGGLLFERR--
        G+AN +ADALSR       ++    P+ +D E   I          + Q+++    + +++   +ND  L+   +L    + VE ++    GLL   +  
Subjt:  GNANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRVLAEAGQAVEFSLSSDGGLLFERR--

Query:  LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSIDFITGLPRTLRGF
        + +P+D+ +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++S+DFIT LP +  G+
Subjt:  LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSIDFITGLPRTLRGF

Query:  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHLQTDGQTERLNQVLEDML
          ++VVVDR +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  +  QTDGQTER NQ +E +L
Subjt:  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHLQTDGQTERLNQVLEDML

Arabidopsis top hits

e value

%identity

Alignment

ATMG00860.1 DNA/RNA polymerases superfamily protein

2.3e-27

45.8

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Query:  HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLG--HVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFIW
        HL MVLQ    ++ YA   KC F   Q+++LG  H++S  GVS DPAK+EA+ GW  P   +E+R FLGL GYYRRFV+N+ +I  PLT+L +K +   W
Subjt:  HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLG--HVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFIW

Query:  SKACEDSFQNLKQKLVTTPVLTVPDGSGSFV
        ++    +F+ LK  + T PVL +PD    FV
Subjt:  SKACEDSFQNLKQKLVTTPVLTVPDGSGSFV

Sequences

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CDS sequence

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ATGGCCCCCGCAGAGCTGAAAGAACTGAAGGTGCAGTTGCAAGAATTGCTTGATAAGGGATTCATTCGACCGAGCGTGTCACCTTGGGGTGCGCCAGTTTTATTTGTTAA
GAAGAAGGACGGATCGATGCGTCTATGCATCGACTATAGGGAGTTGAACAAGGTAACCGTAAAGAACAGATATCCCTTGCCCAGGATTGACGATCTATTCGACCAGTTAC
AGGGAGCCACAGTGTTCTCTAAGATTGATCTTCGGTCGGGATACCATCAGCTGAGGATTAAGGATGAGGATGTACCGAAGACAGCATTTCGTTCCAGATACGGACACTAC
GAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCAGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATCGTGTTTATCGA
CGACATCTTGATATACTCCAAGACGGAGGCCGAACACGAGAAGCACTTACGTATGGTTTTGCAAACACTTCGGGATAATAAGTTGTATGCAAAGTTCTCGAAATGTGAGT
TTTGGCTGAAGCAGGTGTCCTTTCTGGGTCACGTGGTTTCTAAGGCTGGGGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGACCTTCCACTGTC
AGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGTTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTCACTCAGTTGACCAGGAAGGGAGCTCCTTT
TATTTGGAGCAAGGCATGTGAGGACAGTTTCCAGAACCTTAAACAGAAGCTAGTTACCACACCGGTTCTTACTGTACCTGATGGTTCTGGCAGTTTTGTGATTTATAGTG
ATGCTTCCAAGAAGGATTTGGGTTGTGTTTTGATGCAGCAGGGTAAGGTGGTTGCTTATGCGTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATCTA
GAATTGGCAGCAGTGGTTTTTGCTTTGAAAATATGGAGGCATTACTTATATGGTGAAAAGATACAGATATTCACGGATCATAAGAGCTTGAAATACTTCTTTACTCAGAA
AGAATTGAATATGAGACAGCGAAGGTGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATATTGTATCATCCAGGCAACGCGAATGTGGTAGCTGATGCTCTTAGTAGAA
AGGTATCACATTCGGCAGCACTTATTACCCGACAGGCCCCATTGCATCGGGATCTCGAGCGGGCTGAGATTGCAGTGTCAGTGGGGGCAGTTACTATGCAGTTGGCCCAG
TTGACAGTACAGCCGACTTTGAGGCAAAGGATCATTGATGCTCAGAGCAACGATCCTTACCTGGTTGAGAAACGTGTCCTAGCAGAGGCAGGGCAAGCGGTTGAGTTCTC
ATTATCCTCTGATGGTGGACTTTTGTTCGAGAGACGCCTCTGTGTGCCGTCAGATAGTGCGGTTAAGACAGAATTATTATCTGAGGCTCACAGTTCCCCATTTTCCATGC
ACCCAGGTAGTACGAAGATGTATCAGGACCTGAAGCGGGTTTATTGGTGGCGTAACATGAAGAGGGAGGTAGCAGAATTTGTTAGTAGATGCTTGGTGTGTCAGCAGGTT
AAGGCACCAAGGCAGAAGCCAGCGGGTTTATTACAACCCTTGAGCATACCGGAATGGAAGTGGGAAAACGTGTCCATTGATTTCATTACAGGGCTGCCGAGGACTCTGAG
GGGTTTTACAGTGATTTGGGTTGTGGTGGATAGGCTTACCAAGTCAGCACACTTTGTTCCGGGTAAATCCACCTATACTGCTAGTAAGTGGGCACAGTTGTACATGTCCG
AGATAGTGAGGTTGCATGGGGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTCTGGAAGGGTTTGCAGACTGCTATGGGCACGAGGTTGGAC
TTTAGTACGGCTTTCCATCTACAGACTGACGGTCAGACTGAGCGTCTGAACCAGGTTTTAGAGGATATGTTGTGA

mRNA sequence

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Protein sequence

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MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHY
EFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTV
SEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFIWSKACEDSFQNLKQKLVTTPVLTVPDGSGSFVIYSDASKKDLGCVLMQQGKVVAYASRQLKSHEQNYPTHDL
ELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGNANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQ
LTVQPTLRQRIIDAQSNDPYLVEKRVLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQV
KAPRQKPAGLLQPLSIPEWKWENVSIDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLD
FSTAFHLQTDGQTERLNQVLEDML

Cmc08g0227941 (gene) of Melon (Charmono) v1.1 genome