| GenBank top hits | e value | %identity | Alignment |
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| KAA0032034.1 F5J5.1 [Cucumis melo var. makuwa] | 3.0e-42 | 46.12 | Show/hide |
Query: MAQINVDDIIFEGFPKELVESFIDIMKSEFEMSMVGELSCFSGLKIKQRSEGIFITQEK-----------------YAKNIVRK----------------
+AQI VDDIIF GFP++LV +FI+IM+SEFEMSMVGELSCF GL+ KQ+++ IF++QEK Y I +
Subjt: MAQINVDDIIFEGFPKELVESFIDIMKSEFEMSMVGELSCFSGLKIKQRSEGIFITQEK-----------------YAKNIVRK----------------
Query: ---------FGL-------------------EKSQHKKTPGKKRS-----------KNMLHEYGIIQGGMTLYYDNMSVIDISKNPVQHSLTKHIDIRYH
FG+ + + KT + + KN+LHEYG Q +TLY DNMS IDISKNPVQHS TKHI+IR H
Subjt: ---------FGL-------------------EKSQHKKTPGKKRS-----------KNMLHEYGIIQGGMTLYYDNMSVIDISKNPVQHSLTKHIDIRYH
Query: FIRELIEDKIIMLEHVHSNLQLADIFTKPLDAITFEHLRTRLGVC
FIREL+EDK I L+H+ +NLQLADIFTKPLDA +FE+LR LGVC
Subjt: FIRELIEDKIIMLEHVHSNLQLADIFTKPLDAITFEHLRTRLGVC
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| KAA0041780.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 8.7e-50 | 48.29 | Show/hide |
Query: MAQINVDDIIFEGFPKELVESFIDIMKSEFEMSMVGELSCFSGLKIKQRSEGIFITQEKYAKNIVRKFGLEKSQHKKTP---------------------
+AQI VDDIIF GFP++L+ +FI+IM+SEFEMSMVGELSCF GL+IKQ+++GIF++QEKYA+N+V+KFGLE++++K+TP
Subjt: MAQINVDDIIFEGFPKELVESFIDIMKSEFEMSMVGELSCFSGLKIKQRSEGIFITQEKYAKNIVRKFGLEKSQHKKTP---------------------
Query: -------------------------------------------GKKRSKNMLHEYGIIQGGMTLYYDNMSVIDISKNPVQHSLTKHIDIRYHFIRELIED
G + +YG Q MTLY DNMSVIDISKNP+QHS TKHIDIR+HFI+EL+ED
Subjt: -------------------------------------------GKKRSKNMLHEYGIIQGGMTLYYDNMSVIDISKNPVQHSLTKHIDIRYHFIRELIED
Query: KIIMLEHVHSNLQLADIFTKPLDAITFEHLRTRL
K+I +H+ SNLQ+ADIFTKPLDA +FE+LR L
Subjt: KIIMLEHVHSNLQLADIFTKPLDAITFEHLRTRL
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| KAA0066164.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 3.2e-44 | 45.38 | Show/hide |
Query: MAQINVDDIIFEGFPKELVESFIDIMKSEFEMSMVGELSCFSGLKIKQRSEGIFITQEKYAKNIVRKFGLEKSQHKKTPGK-------------------
+AQI VDDIIF GFP +LV +FI EFEMSMVGELSCF GL+IKQ+++ IFI+QEKYA+N+V+KFGLE++++K+TP
Subjt: MAQINVDDIIFEGFPKELVESFIDIMKSEFEMSMVGELSCFSGLKIKQRSEGIFITQEKYAKNIVRKFGLEKSQHKKTPGK-------------------
Query: --------------KR--------------------------------------------------------SKNMLHEYGIIQGGMTLYYDNMSVIDIS
KR KNML EYG Q + LY DNMS I IS
Subjt: --------------KR--------------------------------------------------------SKNMLHEYGIIQGGMTLYYDNMSVIDIS
Query: KNPVQHSLTKHIDIRYHFIRELIEDKIIMLEHVHSNLQLADIFTKPLDAITFEHLRTRLG
KNPVQHS TKHIDIR+HFIREL+EDK+I L+H+ SNLQLADIFTKPLDA +FE+LR LG
Subjt: KNPVQHSLTKHIDIRYHFIRELIEDKIIMLEHVHSNLQLADIFTKPLDAITFEHLRTRLG
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| KAA0066740.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 2.3e-42 | 40.7 | Show/hide |
Query: MAQINVDDIIFEGFPKELVESFIDIMKSEFEMSMVGELSCFSGLKIKQRSEGIFITQEKYAKNIVRKFGLEKSQHKKTPGK-------------------
+AQI VDDIIF GFP++LV +FI+IM+SEFEMSMVGEL CF GL+I+Q+++ IFI+Q+KYA+NIV+KFGLE++++K+TP
Subjt: MAQINVDDIIFEGFPKELVESFIDIMKSEFEMSMVGELSCFSGLKIKQRSEGIFITQEKYAKNIVRKFGLEKSQHKKTPGK-------------------
Query: ---------------------------------------KR--------------------------------------------------------SKN
KR KN
Subjt: ---------------------------------------KR--------------------------------------------------------SKN
Query: MLHEYGIIQGGMTLYYDNMSVIDISKNPVQHSLTKHIDIRYHFIRELIEDKIIMLEHVHSNLQLADIFTKPLDAITFEHLRTRLG
+LHEYG Q MTLY +NMS IDISKN VQHS TKHIDIR+HFIRE +E+K+I L+H+ SNLQLA+IFTKPLDA +FE+L LG
Subjt: MLHEYGIIQGGMTLYYDNMSVIDISKNPVQHSLTKHIDIRYHFIRELIEDKIIMLEHVHSNLQLADIFTKPLDAITFEHLRTRLG
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| TYK18151.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 1.1e-49 | 46.72 | Show/hide |
Query: MAQINVDDIIFEGFPKELVESFIDIMKSEFEMSMVGELSCFSGLKIKQRSEGIFITQEKYAKNIVRKFGLEKSQHKKTPGKKRS----------------
+AQI VDDIIF GFP++LV +FI+IM+ EFEMSMVGELSCF GL+IKQ++ GIFI QEKYA+N+V+KFGLE++++K+TP K +
Subjt: MAQINVDDIIFEGFPKELVESFIDIMKSEFEMSMVGELSCFSGLKIKQRSEGIFITQEKYAKNIVRKFGLEKSQHKKTPGKKRS----------------
Query: ----------------------------------------------------------------------KNMLHEYGIIQGGMTLYYDNMSVIDISKNP
KNML EYG Q MTLY DNMS IDISKN
Subjt: ----------------------------------------------------------------------KNMLHEYGIIQGGMTLYYDNMSVIDISKNP
Query: VQHSLTKHIDIRYHFIRELIEDKIIMLEHVHSNLQLADIFTKPLDAITFEHLRTRLGVC
+QHS TKHIDIR+HFI+EL+EDK+I L+H+ SNLQLADIFTK LDA +F++LRT LGVC
Subjt: VQHSLTKHIDIRYHFIRELIEDKIIMLEHVHSNLQLADIFTKPLDAITFEHLRTRLGVC
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SLH7 F5J5.1 | 1.4e-42 | 46.12 | Show/hide |
Query: MAQINVDDIIFEGFPKELVESFIDIMKSEFEMSMVGELSCFSGLKIKQRSEGIFITQEK-----------------YAKNIVRK----------------
+AQI VDDIIF GFP++LV +FI+IM+SEFEMSMVGELSCF GL+ KQ+++ IF++QEK Y I +
Subjt: MAQINVDDIIFEGFPKELVESFIDIMKSEFEMSMVGELSCFSGLKIKQRSEGIFITQEK-----------------YAKNIVRK----------------
Query: ---------FGL-------------------EKSQHKKTPGKKRS-----------KNMLHEYGIIQGGMTLYYDNMSVIDISKNPVQHSLTKHIDIRYH
FG+ + + KT + + KN+LHEYG Q +TLY DNMS IDISKNPVQHS TKHI+IR H
Subjt: ---------FGL-------------------EKSQHKKTPGKKRS-----------KNMLHEYGIIQGGMTLYYDNMSVIDISKNPVQHSLTKHIDIRYH
Query: FIRELIEDKIIMLEHVHSNLQLADIFTKPLDAITFEHLRTRLGVC
FIREL+EDK I L+H+ +NLQLADIFTKPLDA +FE+LR LGVC
Subjt: FIRELIEDKIIMLEHVHSNLQLADIFTKPLDAITFEHLRTRLGVC
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| A0A5D3CXU0 Gag-pol polyprotein | 1.5e-44 | 45.38 | Show/hide |
Query: MAQINVDDIIFEGFPKELVESFIDIMKSEFEMSMVGELSCFSGLKIKQRSEGIFITQEKYAKNIVRKFGLEKSQHKKTPGK-------------------
+AQI VDDIIF GFP +LV +FI EFEMSMVGELSCF GL+IKQ+++ IFI+QEKYA+N+V+KFGLE++++K+TP
Subjt: MAQINVDDIIFEGFPKELVESFIDIMKSEFEMSMVGELSCFSGLKIKQRSEGIFITQEKYAKNIVRKFGLEKSQHKKTPGK-------------------
Query: --------------KR--------------------------------------------------------SKNMLHEYGIIQGGMTLYYDNMSVIDIS
KR KNML EYG Q + LY DNMS I IS
Subjt: --------------KR--------------------------------------------------------SKNMLHEYGIIQGGMTLYYDNMSVIDIS
Query: KNPVQHSLTKHIDIRYHFIRELIEDKIIMLEHVHSNLQLADIFTKPLDAITFEHLRTRLG
KNPVQHS TKHIDIR+HFIREL+EDK+I L+H+ SNLQLADIFTKPLDA +FE+LR LG
Subjt: KNPVQHSLTKHIDIRYHFIRELIEDKIIMLEHVHSNLQLADIFTKPLDAITFEHLRTRLG
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| A0A5D3D1M6 Gag-pol polyprotein | 5.5e-50 | 46.72 | Show/hide |
Query: MAQINVDDIIFEGFPKELVESFIDIMKSEFEMSMVGELSCFSGLKIKQRSEGIFITQEKYAKNIVRKFGLEKSQHKKTPGKKRS----------------
+AQI VDDIIF GFP++LV +FI+IM+ EFEMSMVGELSCF GL+IKQ++ GIFI QEKYA+N+V+KFGLE++++K+TP K +
Subjt: MAQINVDDIIFEGFPKELVESFIDIMKSEFEMSMVGELSCFSGLKIKQRSEGIFITQEKYAKNIVRKFGLEKSQHKKTPGKKRS----------------
Query: ----------------------------------------------------------------------KNMLHEYGIIQGGMTLYYDNMSVIDISKNP
KNML EYG Q MTLY DNMS IDISKN
Subjt: ----------------------------------------------------------------------KNMLHEYGIIQGGMTLYYDNMSVIDISKNP
Query: VQHSLTKHIDIRYHFIRELIEDKIIMLEHVHSNLQLADIFTKPLDAITFEHLRTRLGVC
+QHS TKHIDIR+HFI+EL+EDK+I L+H+ SNLQLADIFTK LDA +F++LRT LGVC
Subjt: VQHSLTKHIDIRYHFIRELIEDKIIMLEHVHSNLQLADIFTKPLDAITFEHLRTRLGVC
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| A0A5D3DU96 Gag-pol polyprotein | 4.2e-50 | 48.29 | Show/hide |
Query: MAQINVDDIIFEGFPKELVESFIDIMKSEFEMSMVGELSCFSGLKIKQRSEGIFITQEKYAKNIVRKFGLEKSQHKKTP---------------------
+AQI VDDIIF GFP++L+ +FI+IM+SEFEMSMVGELSCF GL+IKQ+++GIF++QEKYA+N+V+KFGLE++++K+TP
Subjt: MAQINVDDIIFEGFPKELVESFIDIMKSEFEMSMVGELSCFSGLKIKQRSEGIFITQEKYAKNIVRKFGLEKSQHKKTP---------------------
Query: -------------------------------------------GKKRSKNMLHEYGIIQGGMTLYYDNMSVIDISKNPVQHSLTKHIDIRYHFIRELIED
G + +YG Q MTLY DNMSVIDISKNP+QHS TKHIDIR+HFI+EL+ED
Subjt: -------------------------------------------GKKRSKNMLHEYGIIQGGMTLYYDNMSVIDISKNPVQHSLTKHIDIRYHFIRELIED
Query: KIIMLEHVHSNLQLADIFTKPLDAITFEHLRTRL
K+I +H+ SNLQ+ADIFTKPLDA +FE+LR L
Subjt: KIIMLEHVHSNLQLADIFTKPLDAITFEHLRTRL
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| A0A5D3DWS6 Gag-pol polyprotein | 1.1e-42 | 40.7 | Show/hide |
Query: MAQINVDDIIFEGFPKELVESFIDIMKSEFEMSMVGELSCFSGLKIKQRSEGIFITQEKYAKNIVRKFGLEKSQHKKTPGK-------------------
+AQI VDDIIF GFP++LV +FI+IM+SEFEMSMVGEL CF GL+I+Q+++ IFI+Q+KYA+NIV+KFGLE++++K+TP
Subjt: MAQINVDDIIFEGFPKELVESFIDIMKSEFEMSMVGELSCFSGLKIKQRSEGIFITQEKYAKNIVRKFGLEKSQHKKTPGK-------------------
Query: ---------------------------------------KR--------------------------------------------------------SKN
KR KN
Subjt: ---------------------------------------KR--------------------------------------------------------SKN
Query: MLHEYGIIQGGMTLYYDNMSVIDISKNPVQHSLTKHIDIRYHFIRELIEDKIIMLEHVHSNLQLADIFTKPLDAITFEHLRTRLG
+LHEYG Q MTLY +NMS IDISKN VQHS TKHIDIR+HFIRE +E+K+I L+H+ SNLQLA+IFTKPLDA +FE+L LG
Subjt: MLHEYGIIQGGMTLYYDNMSVIDISKNPVQHSLTKHIDIRYHFIRELIEDKIIMLEHVHSNLQLADIFTKPLDAITFEHLRTRLG
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 1.6e-14 | 46.84 | Show/hide |
Query: IQGGMTLYYDNMSVIDISKNPVQHSLTKHIDIRYHFIRELIEDKIIMLEHVHSNLQLADIFTKPLDAITFEHLRTRLGV
++ + +Y DN I I+ NP H KHIDI+YHF RE +++ +I LE++ + QLADIFTKPL A F LR +LG+
Subjt: IQGGMTLYYDNMSVIDISKNPVQHSLTKHIDIRYHFIRELIEDKIIMLEHVHSNLQLADIFTKPLDAITFEHLRTRLGV
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 7.5e-12 | 38.64 | Show/hide |
Query: KNMLHEYGIIQGGMTLYYDNMSVIDISKNPVQHSLTKHIDIRYHFIRELIEDKIIMLEHVHSNLQLADIFTKPLDAITFEHLRTRLGV
K L E G+ Q +Y D+ S ID+SKN + H+ TKHID+RYH+IRE+++D+ + + + +N AD+ TK + FE + +G+
Subjt: KNMLHEYGIIQGGMTLYYDNMSVIDISKNPVQHSLTKHIDIRYHFIRELIEDKIIMLEHVHSNLQLADIFTKPLDAITFEHLRTRLGV
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| P92519 Uncharacterized mitochondrial protein AtMg00810 | 3.4e-04 | 33.78 | Show/hide |
Query: VDDIIFEGFPKELVESFIDIMKSEFEMSMVGELSCFSGLKIKQRSEGIFITQEKYAKNIVRKFGLEKSQHKKTP
VDDI+ G L+ I + S F M +G + F G++IK G+F++Q KYA+ I+ G+ + TP
Subjt: VDDIIFEGFPKELVESFIDIMKSEFEMSMVGELSCFSGLKIKQRSEGIFITQEKYAKNIVRKFGLEKSQHKKTP
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 5.3e-10 | 37.36 | Show/hide |
Query: NMLHEYGI-IQGGMTLYYDNMSVIDISKNPVQHSLTKHIDIRYHFIRELIEDKIIMLEHVHSNLQLADIFTKPLDAITFEHLRTRLGVCKL
++L E GI + +Y DN+ + NPV HS KHI I YHFIR ++ + + HV ++ QLAD TKPL F++ +++GV ++
Subjt: NMLHEYGI-IQGGMTLYYDNMSVIDISKNPVQHSLTKHIDIRYHFIRELIEDKIIMLEHVHSNLQLADIFTKPLDAITFEHLRTRLGVCKL
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.8e-10 | 37.36 | Show/hide |
Query: NMLHEYGI-IQGGMTLYYDNMSVIDISKNPVQHSLTKHIDIRYHFIRELIEDKIIMLEHVHSNLQLADIFTKPLDAITFEHLRTRLGVCKL
++L E GI + +Y DN+ + NPV HS KHI + YHFIR ++ + + HV ++ QLAD TKPL + F++ ++GV K+
Subjt: NMLHEYGI-IQGGMTLYYDNMSVIDISKNPVQHSLTKHIDIRYHFIRELIEDKIIMLEHVHSNLQLADIFTKPLDAITFEHLRTRLGVCKL
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