; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc08g0228011 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc08g0228011
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationCMiso1.1chr08:21658330..21659103
RNA-Seq ExpressionCmc08g0228011
SyntenyCmc08g0228011
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032986.1 putative copia-type polyprotein [Cucumis melo var. makuwa]1.5e-7263.08Show/hide
Query:  MINSKFVTTLIEIGTKLSKYKEGNYVDPSYFKSLVGSLRYLTCTRPNILFSVGLVSRFMESPTTTYLKVAKRILRYLKDTLDYGLFYSSSKEFELEGY--
        M+NSK V T IE GTKLSK+++G+ VDPSYFKSLVGSLRYLTCTRP+ILFSVGLVSRFMESPTTT+LKVAKRILRYL+ TLDYGLFYSSSKEF+LEGY  
Subjt:  MINSKFVTTLIEIGTKLSKYKEGNYVDPSYFKSLVGSLRYLTCTRPNILFSVGLVSRFMESPTTTYLKVAKRILRYLKDTLDYGLFYSSSKEFELEGY--

Query:  ----------------------------------MIVTGLEILMIEKA--------LVDMFSSLG----NSTVIHVDNKSTIALAKNLVFHDRSKHIDTR
                                          + ++  E   +  A        L ++  ++G    + TVIHVDNKSTIALAKN VFHDRSKHIDTR
Subjt:  ----------------------------------MIVTGLEILMIEKA--------LVDMFSSLG----NSTVIHVDNKSTIALAKNLVFHDRSKHIDTR

Query:  FHYIRDCILRKKVQVEYVKTEDQIADNFTKSLKVNVFNKSRTLLGVFQ--KTCLREDVKN
        FH+IRDCI RK+VQVEYVKTEDQIAD  TK LKVNVFN  RTLLGVFQ  KTCLREDV+N
Subjt:  FHYIRDCILRKKVQVEYVKTEDQIADNFTKSLKVNVFNKSRTLLGVFQ--KTCLREDVKN

KAA0047979.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]3.9e-7363.08Show/hide
Query:  MINSKFVTTLIEIGTKLSKYKEGNYVDPSYFKSLVGSLRYLTCTRPNILFSVGLVSRFMESPTTTYLKVAKRILRYLKDTLDYGLFYSSSKEFELEGYMI
        M+NSK V T IE GTKLSK++EG+ VDPSYFKSLVGSLRYLTCTRP+ILFSVGLVSRFMESPTTT+LKVAKRILRYL+ TLDYGLFYSSSKEF+LEGY  
Subjt:  MINSKFVTTLIEIGTKLSKYKEGNYVDPSYFKSLVGSLRYLTCTRPNILFSVGLVSRFMESPTTTYLKVAKRILRYLKDTLDYGLFYSSSKEFELEGYMI

Query:  VTGLEILMIEKALVDMFSSLGNS------------------------------------------------TVIHVDNKSTIALAKNLVFHDRSKHIDTR
                  K+       +GN+                                                TVIH+DNKSTIALAKN VFHDRSKHIDTR
Subjt:  VTGLEILMIEKALVDMFSSLGNS------------------------------------------------TVIHVDNKSTIALAKNLVFHDRSKHIDTR

Query:  FHYIRDCILRKKVQVEYVKTEDQIADNFTKSLKVNVFNKSRTLLGVFQ--KTCLREDVKN
        FH+IRDCI RK+VQVEYVKTEDQIAD FTK LKVNVFN  RTLLGVFQ  KTCLREDV+N
Subjt:  FHYIRDCILRKKVQVEYVKTEDQIADNFTKSLKVNVFNKSRTLLGVFQ--KTCLREDVKN

KAA0050876.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.1e-7263.85Show/hide
Query:  MINSKFVTTLIEIGTKLSKYKEGNYVDPSYFKSLVGSLRYLTCTRPNILFSVGLVSRFMESPTTTYLKVAKRILRYLKDTLDYGLFYSSSKEFELEGY--
        M+NSK V T IE GTKLSK++EG+ VDPSYFKSLVGSLRYLTCTRP+ILFSVGLVSRFMES TTTYLKVAKRILRYL+ TLDYGLFYSSSKEF+LEGY  
Subjt:  MINSKFVTTLIEIGTKLSKYKEGNYVDPSYFKSLVGSLRYLTCTRPNILFSVGLVSRFMESPTTTYLKVAKRILRYLKDTLDYGLFYSSSKEFELEGY--

Query:  ----------MIVTGLEILMI--------------------EKALVDMFSSL-----------------GNSTVIHVDNKSTIALAKNLVFHDRSKHIDT
                   I T   +L I                    E   V + S +                  + TVIHVDNKSTIALAKN VFHDRSKHIDT
Subjt:  ----------MIVTGLEILMI--------------------EKALVDMFSSL-----------------GNSTVIHVDNKSTIALAKNLVFHDRSKHIDT

Query:  RFHYIRDCILRKKVQVEYVKTEDQIADNFTKSLKVNVFNKSRTLLGVF-QKTCLREDVKN
        RFH+IRDCIL+K+VQVEYVKTEDQI D FTK LKVNVFN  RTL GVF +KTCLREDV+N
Subjt:  RFHYIRDCILRKKVQVEYVKTEDQIADNFTKSLKVNVFNKSRTLLGVF-QKTCLREDVKN

TYK12247.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]3.0e-7363.32Show/hide
Query:  MINSKFVTTLIEIGTKLSKYKEGNYVDPSYFKSLVGSLRYLTCTRPNILFSVGLVSRFMESPTTTYLKVAKRILRYLKDTLDYGLFYSSSKEFELEGY--
        M+NSK V T IE GTKLSK++EG+ VDPSYFKSLVGSLRYLTCTRP+ILFSVGLVSRFMESPTTT+LKVAKRILRYL+ TLDYGLFYSSSKEF+LEGY  
Subjt:  MINSKFVTTLIEIGTKLSKYKEGNYVDPSYFKSLVGSLRYLTCTRPNILFSVGLVSRFMESPTTTYLKVAKRILRYLKDTLDYGLFYSSSKEFELEGY--

Query:  ----------------------------------MIVTGLEILMIEKA--------LVDMFSSLG----NSTVIHVDNKSTIALAKNLVFHDRSKHIDTR
                                          + ++  E   +  A        L ++  ++G    + TVIH+DNKSTIALAKN VFHDRSKHIDTR
Subjt:  ----------------------------------MIVTGLEILMIEKA--------LVDMFSSLG----NSTVIHVDNKSTIALAKNLVFHDRSKHIDTR

Query:  FHYIRDCILRKKVQVEYVKTEDQIADNFTKSLKVNVFNKSRTLLGVF-QKTCLREDVKN
        FH+IRDCI RK+VQVEYVKTEDQIAD FTK LKVNVFN  RTLLGVF +KTCLREDV+N
Subjt:  FHYIRDCILRKKVQVEYVKTEDQIADNFTKSLKVNVFNKSRTLLGVF-QKTCLREDVKN

TYK21979.1 putative copia-type polyprotein [Cucumis melo var. makuwa]1.5e-7263.08Show/hide
Query:  MINSKFVTTLIEIGTKLSKYKEGNYVDPSYFKSLVGSLRYLTCTRPNILFSVGLVSRFMESPTTTYLKVAKRILRYLKDTLDYGLFYSSSKEFELEGY--
        M+NSK V T IE GTKLSK+++G+ VDPSYFKSLVGSLRYLTCTRP+ILFSVGLVSRFMESPTTT+LKVAKRILRYL+ TLDYGLFYSSSKEF+LEGY  
Subjt:  MINSKFVTTLIEIGTKLSKYKEGNYVDPSYFKSLVGSLRYLTCTRPNILFSVGLVSRFMESPTTTYLKVAKRILRYLKDTLDYGLFYSSSKEFELEGY--

Query:  ----------------------------------MIVTGLEILMIEKA--------LVDMFSSLG----NSTVIHVDNKSTIALAKNLVFHDRSKHIDTR
                                          + ++  E   +  A        L ++  ++G    + TVIHVDNKSTIALAKN VFHDRSKHIDTR
Subjt:  ----------------------------------MIVTGLEILMIEKA--------LVDMFSSLG----NSTVIHVDNKSTIALAKNLVFHDRSKHIDTR

Query:  FHYIRDCILRKKVQVEYVKTEDQIADNFTKSLKVNVFNKSRTLLGVFQ--KTCLREDVKN
        FH+IRDCI RK+VQVEYVKTEDQIAD  TK LKVNVFN  RTLLGVFQ  KTCLREDV+N
Subjt:  FHYIRDCILRKKVQVEYVKTEDQIADNFTKSLKVNVFNKSRTLLGVFQ--KTCLREDVKN

TrEMBL top hitse value%identityAlignment
A0A5A7SSL5 Putative copia-type polyprotein7.2e-7363.08Show/hide
Query:  MINSKFVTTLIEIGTKLSKYKEGNYVDPSYFKSLVGSLRYLTCTRPNILFSVGLVSRFMESPTTTYLKVAKRILRYLKDTLDYGLFYSSSKEFELEGY--
        M+NSK V T IE GTKLSK+++G+ VDPSYFKSLVGSLRYLTCTRP+ILFSVGLVSRFMESPTTT+LKVAKRILRYL+ TLDYGLFYSSSKEF+LEGY  
Subjt:  MINSKFVTTLIEIGTKLSKYKEGNYVDPSYFKSLVGSLRYLTCTRPNILFSVGLVSRFMESPTTTYLKVAKRILRYLKDTLDYGLFYSSSKEFELEGY--

Query:  ----------------------------------MIVTGLEILMIEKA--------LVDMFSSLG----NSTVIHVDNKSTIALAKNLVFHDRSKHIDTR
                                          + ++  E   +  A        L ++  ++G    + TVIHVDNKSTIALAKN VFHDRSKHIDTR
Subjt:  ----------------------------------MIVTGLEILMIEKA--------LVDMFSSLG----NSTVIHVDNKSTIALAKNLVFHDRSKHIDTR

Query:  FHYIRDCILRKKVQVEYVKTEDQIADNFTKSLKVNVFNKSRTLLGVFQ--KTCLREDVKN
        FH+IRDCI RK+VQVEYVKTEDQIAD  TK LKVNVFN  RTLLGVFQ  KTCLREDV+N
Subjt:  FHYIRDCILRKKVQVEYVKTEDQIADNFTKSLKVNVFNKSRTLLGVFQ--KTCLREDVKN

A0A5A7U3F3 Retrovirus-related Pol polyprotein from transposon TNT 1-941.9e-7363.08Show/hide
Query:  MINSKFVTTLIEIGTKLSKYKEGNYVDPSYFKSLVGSLRYLTCTRPNILFSVGLVSRFMESPTTTYLKVAKRILRYLKDTLDYGLFYSSSKEFELEGYMI
        M+NSK V T IE GTKLSK++EG+ VDPSYFKSLVGSLRYLTCTRP+ILFSVGLVSRFMESPTTT+LKVAKRILRYL+ TLDYGLFYSSSKEF+LEGY  
Subjt:  MINSKFVTTLIEIGTKLSKYKEGNYVDPSYFKSLVGSLRYLTCTRPNILFSVGLVSRFMESPTTTYLKVAKRILRYLKDTLDYGLFYSSSKEFELEGYMI

Query:  VTGLEILMIEKALVDMFSSLGNS------------------------------------------------TVIHVDNKSTIALAKNLVFHDRSKHIDTR
                  K+       +GN+                                                TVIH+DNKSTIALAKN VFHDRSKHIDTR
Subjt:  VTGLEILMIEKALVDMFSSLGNS------------------------------------------------TVIHVDNKSTIALAKNLVFHDRSKHIDTR

Query:  FHYIRDCILRKKVQVEYVKTEDQIADNFTKSLKVNVFNKSRTLLGVFQ--KTCLREDVKN
        FH+IRDCI RK+VQVEYVKTEDQIAD FTK LKVNVFN  RTLLGVFQ  KTCLREDV+N
Subjt:  FHYIRDCILRKKVQVEYVKTEDQIADNFTKSLKVNVFNKSRTLLGVFQ--KTCLREDVKN

A0A5A7U9K5 Putative mitochondrial protein5.5e-7363.85Show/hide
Query:  MINSKFVTTLIEIGTKLSKYKEGNYVDPSYFKSLVGSLRYLTCTRPNILFSVGLVSRFMESPTTTYLKVAKRILRYLKDTLDYGLFYSSSKEFELEGY--
        M+NSK V T IE GTKLSK++EG+ VDPSYFKSLVGSLRYLTCTRP+ILFSVGLVSRFMES TTTYLKVAKRILRYL+ TLDYGLFYSSSKEF+LEGY  
Subjt:  MINSKFVTTLIEIGTKLSKYKEGNYVDPSYFKSLVGSLRYLTCTRPNILFSVGLVSRFMESPTTTYLKVAKRILRYLKDTLDYGLFYSSSKEFELEGY--

Query:  ----------MIVTGLEILMI--------------------EKALVDMFSSL-----------------GNSTVIHVDNKSTIALAKNLVFHDRSKHIDT
                   I T   +L I                    E   V + S +                  + TVIHVDNKSTIALAKN VFHDRSKHIDT
Subjt:  ----------MIVTGLEILMI--------------------EKALVDMFSSL-----------------GNSTVIHVDNKSTIALAKNLVFHDRSKHIDT

Query:  RFHYIRDCILRKKVQVEYVKTEDQIADNFTKSLKVNVFNKSRTLLGVF-QKTCLREDVKN
        RFH+IRDCIL+K+VQVEYVKTEDQI D FTK LKVNVFN  RTL GVF +KTCLREDV+N
Subjt:  RFHYIRDCILRKKVQVEYVKTEDQIADNFTKSLKVNVFNKSRTLLGVF-QKTCLREDVKN

A0A5D3CJX7 Retrovirus-related Pol polyprotein from transposon TNT 1-941.5e-7363.32Show/hide
Query:  MINSKFVTTLIEIGTKLSKYKEGNYVDPSYFKSLVGSLRYLTCTRPNILFSVGLVSRFMESPTTTYLKVAKRILRYLKDTLDYGLFYSSSKEFELEGY--
        M+NSK V T IE GTKLSK++EG+ VDPSYFKSLVGSLRYLTCTRP+ILFSVGLVSRFMESPTTT+LKVAKRILRYL+ TLDYGLFYSSSKEF+LEGY  
Subjt:  MINSKFVTTLIEIGTKLSKYKEGNYVDPSYFKSLVGSLRYLTCTRPNILFSVGLVSRFMESPTTTYLKVAKRILRYLKDTLDYGLFYSSSKEFELEGY--

Query:  ----------------------------------MIVTGLEILMIEKA--------LVDMFSSLG----NSTVIHVDNKSTIALAKNLVFHDRSKHIDTR
                                          + ++  E   +  A        L ++  ++G    + TVIH+DNKSTIALAKN VFHDRSKHIDTR
Subjt:  ----------------------------------MIVTGLEILMIEKA--------LVDMFSSLG----NSTVIHVDNKSTIALAKNLVFHDRSKHIDTR

Query:  FHYIRDCILRKKVQVEYVKTEDQIADNFTKSLKVNVFNKSRTLLGVF-QKTCLREDVKN
        FH+IRDCI RK+VQVEYVKTEDQIAD FTK LKVNVFN  RTLLGVF +KTCLREDV+N
Subjt:  FHYIRDCILRKKVQVEYVKTEDQIADNFTKSLKVNVFNKSRTLLGVF-QKTCLREDVKN

A0A5D3DF53 Putative copia-type polyprotein7.2e-7363.08Show/hide
Query:  MINSKFVTTLIEIGTKLSKYKEGNYVDPSYFKSLVGSLRYLTCTRPNILFSVGLVSRFMESPTTTYLKVAKRILRYLKDTLDYGLFYSSSKEFELEGY--
        M+NSK V T IE GTKLSK+++G+ VDPSYFKSLVGSLRYLTCTRP+ILFSVGLVSRFMESPTTT+LKVAKRILRYL+ TLDYGLFYSSSKEF+LEGY  
Subjt:  MINSKFVTTLIEIGTKLSKYKEGNYVDPSYFKSLVGSLRYLTCTRPNILFSVGLVSRFMESPTTTYLKVAKRILRYLKDTLDYGLFYSSSKEFELEGY--

Query:  ----------------------------------MIVTGLEILMIEKA--------LVDMFSSLG----NSTVIHVDNKSTIALAKNLVFHDRSKHIDTR
                                          + ++  E   +  A        L ++  ++G    + TVIHVDNKSTIALAKN VFHDRSKHIDTR
Subjt:  ----------------------------------MIVTGLEILMIEKA--------LVDMFSSLG----NSTVIHVDNKSTIALAKNLVFHDRSKHIDTR

Query:  FHYIRDCILRKKVQVEYVKTEDQIADNFTKSLKVNVFNKSRTLLGVFQ--KTCLREDVKN
        FH+IRDCI RK+VQVEYVKTEDQIAD  TK LKVNVFN  RTLLGVFQ  KTCLREDV+N
Subjt:  FHYIRDCILRKKVQVEYVKTEDQIADNFTKSLKVNVFNKSRTLLGVFQ--KTCLREDVKN

SwissProt top hitse value%identityAlignment
P04146 Copia protein1.3e-1528.51Show/hide
Query:  KSLVGSLRY-LTCTRPNILFSVGLVSRFMESPTTTYLKVAKRILRYLKDTLDYGLFYSSSKEFE--LEGYM------------IVTGL------------
        +SL+G L Y + CTRP++  +V ++SR+     +   +  KR+LRYLK T+D  L +  +  FE  + GY+              TG             
Subjt:  KSLVGSLRY-LTCTRPNILFSVGLVSRFMESPTTTYLKVAKRILRYLKDTLDYGLFYSSSKEFE--LEGYM------------IVTGL------------

Query:  -------------------------EILMIEKALVDMFSSLGNSTVIHVDNKSTIALAKNLVFHDRSKHIDTRFHYIRDCILRKKVQVEYVKTEDQIADN
                                 E L ++  L  +   L N   I+ DN+  I++A N   H R+KHID ++H+ R+ +    + +EY+ TE+Q+AD 
Subjt:  -------------------------EILMIEKALVDMFSSLGNSTVIHVDNKSTIALAKNLVFHDRSKHIDTRFHYIRDCILRKKVQVEYVKTEDQIADN

Query:  FTKSLKVNVFNKSRTLLGVFQ
        FTK L    F + R  LG+ Q
Subjt:  FTKSLKVNVFNKSRTLLGVFQ

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-942.7e-1629.13Show/hide
Query:  MINSKFVTTLIEIGTKLSK-------YKEGNYVDPSYFKSLVGSLRY-LTCTRPNILFSVGLVSRFMESPTTTYLKVAKRILRYLKDTLDYGLFYSSSKE
        M N+K V+T +    KLSK        ++GN     Y  S VGSL Y + CTRP+I  +VG+VSRF+E+P   + +  K ILRYL+ T    L +  S  
Subjt:  MINSKFVTTLIEIGTKLSK-------YKEGNYVDPSYFKSLVGSLRY-LTCTRPNILFSVGLVSRFMESPTTTYLKVAKRILRYLKDTLDYGLFYSSSKE

Query:  FELEGY------------------------------------------------MIVTGLEILMIEKALVDMFSSLGNSTVIHVDNKSTIALAKNLVFHD
          L+GY                                                   TG E++ +++ L ++        V++ D++S I L+KN ++H 
Subjt:  FELEGY------------------------------------------------MIVTGLEILMIEKALVDMFSSLGNSTVIHVDNKSTIALAKNLVFHD

Query:  RSKHIDTRFHYIRDCILRKKVQVEYVKTEDQIADNFTKSLKVNVFNKSRTLLGV
        R+KHID R+H+IR+ +  + ++V  + T +  AD  TK +  N F   + L+G+
Subjt:  RSKHIDTRFHYIRDCILRKKVQVEYVKTEDQIADNFTKSLKVNVFNKSRTLLGV

P92519 Uncharacterized mitochondrial protein AtMg008105.8e-1138.27Show/hide
Query:  SKYKEGNYVDPSYFKSLVGSLRYLTCTRPNILFSVGLVSRFMESPTTTYLKVAKRILRYLKDTLDYGLFYSSSKEFELEGY
        S      Y DPS F+S+VG+L+YLT TRP+I ++V +V + M  PT     + KR+LRY+K T+ +GL+   + +  ++ +
Subjt:  SKYKEGNYVDPSYFKSLVGSLRYLTCTRPNILFSVGLVSRFMESPTTTYLKVAKRILRYLKDTLDYGLFYSSSKEFELEGY

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE18.6e-2330.89Show/hide
Query:  MINSKFVTTLIEIGTKLSKYKEGNYVDPSYFKSLVGSLRYLTCTRPNILFSVGLVSRFMESPTTTYLKVAKRILRYLKDTLDYGLFYSSSKEFEL-----
        MI +K VTT +    KLS Y      DP+ ++ +VGSL+YL  TRP+I ++V  +S+FM  PT  +L+  KRILRYL  T ++G+F        L     
Subjt:  MINSKFVTTLIEIGTKLSKYKEGNYVDPSYFKSLVGSLRYLTCTRPNILFSVGLVSRFMESPTTTYLKVAKRILRYLKDTLDYGLFYSSSKEFEL-----

Query:  -------------EGYMIV------------------------------TGLEILMIEKALVDMFSSLGNSTVIHVDNKSTIALAKNLVFHDRSKHIDTR
                      GY++                               T  E+  I   L ++   L    VI+ DN     L  N VFH R KHI   
Subjt:  -------------EGYMIV------------------------------TGLEILMIEKALVDMFSSLGNSTVIHVDNKSTIALAKNLVFHDRSKHIDTR

Query:  FHYIRDCILRKKVQVEYVKTEDQIADNFTKSLKVNVFNKSRTLLGV
        +H+IR+ +    ++V +V T DQ+AD  TK L    F    + +GV
Subjt:  FHYIRDCILRKKVQVEYVKTEDQIADNFTKSLKVNVFNKSRTLLGV

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE23.1e-2027.82Show/hide
Query:  MINSKFVTTLIEIGTKLSKYKEGNYVDPSYFKSLVGSLRYLTCTRPNILFSVGLVSRFMESPTTTYLKVAKRILRYLKDTLDYGLFYSSSKEFEL-----
        M+ +K V T +    KL+ +      DP+ ++ +VGSL+YL  TRP++ ++V  +S++M  PT  +    KR+LRYL  T D+G+F        L     
Subjt:  MINSKFVTTLIEIGTKLSKYKEGNYVDPSYFKSLVGSLRYLTCTRPNILFSVGLVSRFMESPTTTYLKVAKRILRYLKDTLDYGLFYSSSKEFEL-----

Query:  -------------EGYMIV------------------------------TGLEILMIEKALVDMFSSLGNSTVIHVDNKSTIALAKNLVFHDRSKHIDTR
                      GY++                               T  E+  I   L ++   L +  VI+ DN     L  N VFH R KHI   
Subjt:  -------------EGYMIV------------------------------TGLEILMIEKALVDMFSSLGNSTVIHVDNKSTIALAKNLVFHDRSKHIDTR

Query:  FHYIRDCILRKKVQVEYVKTEDQIADNFTKSLKVNVFNKSRTLLGVFQ
        +H+IR+ +    ++V +V T DQ+AD  TK L    F      +GV +
Subjt:  FHYIRDCILRKKVQVEYVKTEDQIADNFTKSLKVNVFNKSRTLLGVFQ

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 85.2e-1525.93Show/hide
Query:  SKYKEGNYVDPSYFKSLVGSLRYLTCTRPNILFSVGLVSRFMESPTTTYLKVAKRILRYLKDTLDYGLFYSSSKEFELE------------------GYM
        S +  G++VD   ++ L+G L YL  TR +I F+V  +S+F E+P   + +   +IL Y+K T+  GLFYSS  E +L+                  GY 
Subjt:  SKYKEGNYVDPSYFKSLVGSLRYLTCTRPNILFSVGLVSRFMESPTTTYLKVAKRILRYLKDTLDYGLFYSSSKEFELE------------------GYM

Query:  IVTGL------------------------------EILMIEKALVDMFSSLGNSTVIHVDNKSTIALAKNLVFHDRSKHIDTRFHYIRD-CILRKKVQVE
        +  G                               E++ + +   ++   L   T++  DN + I +A N VFH+R+KHI++  H +R+  + +  +   
Subjt:  IVTGL------------------------------EILMIEKALVDMFSSLGNSTVIHVDNKSTIALAKNLVFHDRSKHIDTRFHYIRD-CILRKKVQVE

Query:  YVKTEDQIADNFTKSL
        +   ++Q  D FT+ L
Subjt:  YVKTEDQIADNFTKSL

ATMG00240.1 Gag-Pol-related retrotransposon family protein6.8e-0735.59Show/hide
Query:  YLTCTRPNILFSVGLVSRFMESPTTTYLKVAKRILRYLKDTLDYGLFYSSSKEFELEGY
        YLT TRP++ F+V  +S+F  +  T  ++   ++L Y+K T+  GLFYS++ + +L+ +
Subjt:  YLTCTRPNILFSVGLVSRFMESPTTTYLKVAKRILRYLKDTLDYGLFYSSSKEFELEGY

ATMG00810.1 DNA/RNA polymerases superfamily protein4.1e-1238.27Show/hide
Query:  SKYKEGNYVDPSYFKSLVGSLRYLTCTRPNILFSVGLVSRFMESPTTTYLKVAKRILRYLKDTLDYGLFYSSSKEFELEGY
        S      Y DPS F+S+VG+L+YLT TRP+I ++V +V + M  PT     + KR+LRY+K T+ +GL+   + +  ++ +
Subjt:  SKYKEGNYVDPSYFKSLVGSLRYLTCTRPNILFSVGLVSRFMESPTTTYLKVAKRILRYLKDTLDYGLFYSSSKEFELEGY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCAATTCTAAGTTTGTCACAACTCTGATTGAAATTGGAACCAAATTGTCCAAATATAAAGAAGGAAACTATGTTGATCCTTCATATTTCAAAAGTTTGGTT
GGGAGTTTGAGATATTTGACTTGCACACGACCAAATATCCTTTTTAGTGTTGGATTGGTGAGTCGATTTATGGAATCTCCTACAACTACTTACTTGAAAGTTGCA
AAGAGAATTCTTCGTTACCTCAAAGATACACTTGACTATGGGTTATTTTATTCTTCATCTAAAGAATTTGAGCTTGAAGGCTATATGATAGTGACTGGGCTGGAG
ATACTAATGATTGAAAAAGCACTAGTGGATATGTTTTCTTCGTTAGGTAATTCAACTGTGATCCATGTAGACAATAAGTCGACAATTGCTCTAGCAAAGAATCTT
GTGTTCCATGATCGTAGCAAACACATTGATACAAGATTTCACTACATTAGAGATTGCATTTTAAGGAAGAAGGTTCAAGTTGAATATGTGAAGACTGAAGATCAA
ATTGCAGATAATTTTACAAAGTCACTCAAAGTTAATGTGTTTAACAAGTCAAGAACTTTGCTTGGAGTTTTTCAGAAAACATGTTTAAGGGAGGATGTTAAAAAT
TAA
mRNA sequenceShow/hide mRNA sequence
ATGATCAATTCTAAGTTTGTCACAACTCTGATTGAAATTGGAACCAAATTGTCCAAATATAAAGAAGGAAACTATGTTGATCCTTCATATTTCAAAAGTTTGGTT
GGGAGTTTGAGATATTTGACTTGCACACGACCAAATATCCTTTTTAGTGTTGGATTGGTGAGTCGATTTATGGAATCTCCTACAACTACTTACTTGAAAGTTGCA
AAGAGAATTCTTCGTTACCTCAAAGATACACTTGACTATGGGTTATTTTATTCTTCATCTAAAGAATTTGAGCTTGAAGGCTATATGATAGTGACTGGGCTGGAG
ATACTAATGATTGAAAAAGCACTAGTGGATATGTTTTCTTCGTTAGGTAATTCAACTGTGATCCATGTAGACAATAAGTCGACAATTGCTCTAGCAAAGAATCTT
GTGTTCCATGATCGTAGCAAACACATTGATACAAGATTTCACTACATTAGAGATTGCATTTTAAGGAAGAAGGTTCAAGTTGAATATGTGAAGACTGAAGATCAA
ATTGCAGATAATTTTACAAAGTCACTCAAAGTTAATGTGTTTAACAAGTCAAGAACTTTGCTTGGAGTTTTTCAGAAAACATGTTTAAGGGAGGATGTTAAAAAT
TAA
Protein sequenceShow/hide protein sequence
MINSKFVTTLIEIGTKLSKYKEGNYVDPSYFKSLVGSLRYLTCTRPNILFSVGLVSRFMESPTTTYLKVAKRILRYLKDTLDYGLFYSSSKEFELEGYMIVTGLE
ILMIEKALVDMFSSLGNSTVIHVDNKSTIALAKNLVFHDRSKHIDTRFHYIRDCILRKKVQVEYVKTEDQIADNFTKSLKVNVFNKSRTLLGVFQKTCLREDVKN