| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0037745.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 1.2e-139 | 77.91 | Show/hide |
Query: MFSRLSSFHSSFSSPQPFFTDTSVELFPLSESTLDTELAQSAPTSANSNQSSISDYGPEPTPDTPPRRST------------------------------
MFSRLSSFH+SFSSPQ FFTDTS++LFPLSEST ELAQSAPTSA S+QSSISD P+P PD PPRRST
Subjt: MFSRLSSFHSSFSSPQPFFTDTSVELFPLSESTLDTELAQSAPTSANSNQSSISDYGPEPTPDTPPRRST------------------------------
Query: ------QKAMNDELQALDKIHTWDYVDLPPGKKLIGCKWIYKIKTHSDDTIEHYKARFVAKGYLQEYGIDYEETFAHVARMTSVRSLLAVSAAKQWPLFQ
QKAMNDELQAL+K+HTWDYVDLPPGK+ IGCKWIYKIKTHSD TIE YKAR VAKGY QEYGIDYEETFA VARMTSVRSLLAV+AAKQWPL Q
Subjt: ------QKAMNDELQALDKIHTWDYVDLPPGKKLIGCKWIYKIKTHSDDTIEHYKARFVAKGYLQEYGIDYEETFAHVARMTSVRSLLAVSAAKQWPLFQ
Query: MDVKNAFLNGTLFEEVYMQPPPGTSPPPHKVCLLRRALYGLKQAPRTWFAIFSSTITQLGFSSSPHDTALFTRHTPQGIVLLLLYVDDIIITGNDSQDIS
MDVKNAFLNGTL EEVYM+PPPGTS PPHKVCLLRRALYGLKQAPR WFA FSSTITQLGF+SSPHDTALFTRHTPQGIVLLLLYVDD+IITGND IS
Subjt: MDVKNAFLNGTLFEEVYMQPPPGTSPPPHKVCLLRRALYGLKQAPRTWFAIFSSTITQLGFSSSPHDTALFTRHTPQGIVLLLLYVDDIIITGNDSQDIS
Query: DLQHYLSQYFEMKDLGSLNYFLGLEVSRRSDGYFL
DLQHYL Q+FEMKDLGSLNYFLGLEVSRRSDGY L
Subjt: DLQHYLSQYFEMKDLGSLNYFLGLEVSRRSDGYFL
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| KAA0041341.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 6.4e-173 | 97.47 | Show/hide |
Query: MFSRLSSFHSSFSSPQPFFTDTSVELFPLSESTLDTELAQSAPTSANSNQSSISDYGPEPTPDTPPRRST--------QKAMNDELQALDKIHTWDYVDL
MFSRLSSFHSSFSSPQPFFTDTSVELFPLSESTLDTELAQSAPTSANSNQSSISDYGPEPTPDTPPRRST QKAMNDELQALDKIHTWDYVDL
Subjt: MFSRLSSFHSSFSSPQPFFTDTSVELFPLSESTLDTELAQSAPTSANSNQSSISDYGPEPTPDTPPRRST--------QKAMNDELQALDKIHTWDYVDL
Query: PPGKKLIGCKWIYKIKTHSDDTIEHYKARFVAKGYLQEYGIDYEETFAHVARMTSVRSLLAVSAAKQWPLFQMDVKNAFLNGTLFEEVYMQPPPGTSPPP
PPGKKLIGCKWIYKIKTHSDDTIEHYKARFVAKGYLQEYGIDYEETFAHVARMTSVRSLLAVSAAKQWPLFQMDVKNAFLNGTLFEEVYMQPPPGTSPPP
Subjt: PPGKKLIGCKWIYKIKTHSDDTIEHYKARFVAKGYLQEYGIDYEETFAHVARMTSVRSLLAVSAAKQWPLFQMDVKNAFLNGTLFEEVYMQPPPGTSPPP
Query: HKVCLLRRALYGLKQAPRTWFAIFSSTITQLGFSSSPHDTALFTRHTPQGIVLLLLYVDDIIITGNDSQDISDLQHYLSQYFEMKDLGSLNYFLGLEVSR
HKVCLLRRALYGLKQAPRTWFAIFSSTITQLGFSSSPHDTALFTRHTPQGIVLLLLYVDDIIITGNDSQDISDLQHYLSQYFEMKDLGSLNYFLGLEVSR
Subjt: HKVCLLRRALYGLKQAPRTWFAIFSSTITQLGFSSSPHDTALFTRHTPQGIVLLLLYVDDIIITGNDSQDISDLQHYLSQYFEMKDLGSLNYFLGLEVSR
Query: RSDGYFLLTPTQLRHH
RSDGYFLLTPTQLRHH
Subjt: RSDGYFLLTPTQLRHH
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| KAA0064888.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 1.4e-140 | 78.51 | Show/hide |
Query: MFSRLSSFHSSFSSPQPFFTDTSVELFPLSESTLDTELAQSAPTSANSNQSSISDYGPEPTPDTPPRRST------------------------------
MFSRLSSFH+SFSSPQPFFTDTS++LFP SES + ELAQSAPTSA SNQSSIS PEPTPDTPPRRST
Subjt: MFSRLSSFHSSFSSPQPFFTDTSVELFPLSESTLDTELAQSAPTSANSNQSSISDYGPEPTPDTPPRRST------------------------------
Query: ------QKAMNDELQALDKIHTWDYVDLPPGKKLIGCKWIYKIKTHSDDTIEHYKARFVAKGYLQEYGIDYEETFAHVARMTSVRSLLAVSAAKQWPLFQ
QKAMNDELQAL+K HTWDYVDLPPGK+ IGCKWIYKIKTHSD TIE YKAR VAKGY QEYGIDYEETFA VARMTSVRSLLAV+AAKQWPL Q
Subjt: ------QKAMNDELQALDKIHTWDYVDLPPGKKLIGCKWIYKIKTHSDDTIEHYKARFVAKGYLQEYGIDYEETFAHVARMTSVRSLLAVSAAKQWPLFQ
Query: MDVKNAFLNGTLFEEVYMQPPPGTSPPPHKVCLLRRALYGLKQAPRTWFAIFSSTITQLGFSSSPHDTALFTRHTPQGIVLLLLYVDDIIITGNDSQDIS
MDVKNAFLNGTL EEVYM+PP GTS PPHKVCLLRRALYGLKQAPR WFA FSSTITQLGF+SSPHDTALFTRHTPQGIVLLLLYVDD+IITGND Q IS
Subjt: MDVKNAFLNGTLFEEVYMQPPPGTSPPPHKVCLLRRALYGLKQAPRTWFAIFSSTITQLGFSSSPHDTALFTRHTPQGIVLLLLYVDDIIITGNDSQDIS
Query: DLQHYLSQYFEMKDLGSLNYFLGLEVSRRSDGYFL
DLQHYL Q+FEMKDLGSLNYFLGLEVSRRSDGY L
Subjt: DLQHYLSQYFEMKDLGSLNYFLGLEVSRRSDGYFL
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| TYK19656.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 1.2e-139 | 77.91 | Show/hide |
Query: MFSRLSSFHSSFSSPQPFFTDTSVELFPLSESTLDTELAQSAPTSANSNQSSISDYGPEPTPDTPPRRST------------------------------
MFSRLSSFH+SFSSPQ FFTDTS++LFPLSEST ELAQSAPTSA S+QSSISD P+P PD PPRRST
Subjt: MFSRLSSFHSSFSSPQPFFTDTSVELFPLSESTLDTELAQSAPTSANSNQSSISDYGPEPTPDTPPRRST------------------------------
Query: ------QKAMNDELQALDKIHTWDYVDLPPGKKLIGCKWIYKIKTHSDDTIEHYKARFVAKGYLQEYGIDYEETFAHVARMTSVRSLLAVSAAKQWPLFQ
QKAMNDELQAL+K+HTWDYVDLPPGK+ IGCKWIYKIKTHSD TIE YKAR VAKGY QEYGIDYEETFA VARMTSVRSLLAV+AAKQWPL Q
Subjt: ------QKAMNDELQALDKIHTWDYVDLPPGKKLIGCKWIYKIKTHSDDTIEHYKARFVAKGYLQEYGIDYEETFAHVARMTSVRSLLAVSAAKQWPLFQ
Query: MDVKNAFLNGTLFEEVYMQPPPGTSPPPHKVCLLRRALYGLKQAPRTWFAIFSSTITQLGFSSSPHDTALFTRHTPQGIVLLLLYVDDIIITGNDSQDIS
MDVKNAFLNGTL EEVYM+PPPGTS PPHKVCLLRRALYGLKQAPR WFA FSSTITQLGF+SSPHDTALFTRHTPQGIVLLLLYVDD+IITGND IS
Subjt: MDVKNAFLNGTLFEEVYMQPPPGTSPPPHKVCLLRRALYGLKQAPRTWFAIFSSTITQLGFSSSPHDTALFTRHTPQGIVLLLLYVDDIIITGNDSQDIS
Query: DLQHYLSQYFEMKDLGSLNYFLGLEVSRRSDGYFL
DLQHYL Q+FEMKDLGSLNYFLGLEVSRRSDGY L
Subjt: DLQHYLSQYFEMKDLGSLNYFLGLEVSRRSDGYFL
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| TYK21532.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 5.5e-140 | 77.91 | Show/hide |
Query: MFSRLSSFHSSFSSPQPFFTDTSVELFPLSESTLDTELAQSAPTSANSNQSSISDYGPEPTPDTPPRRST------------------------------
MFSRLSSFH+SFSSPQ FFTDTS++LFPL EST D ELAQSAPTSA S+QSSISD P+P+PD PPRRST
Subjt: MFSRLSSFHSSFSSPQPFFTDTSVELFPLSESTLDTELAQSAPTSANSNQSSISDYGPEPTPDTPPRRST------------------------------
Query: ------QKAMNDELQALDKIHTWDYVDLPPGKKLIGCKWIYKIKTHSDDTIEHYKARFVAKGYLQEYGIDYEETFAHVARMTSVRSLLAVSAAKQWPLFQ
QKAMNDELQAL+K HTWDYVDLPPGK+ IGCKWIYKIKTHSD TIE YKAR VAKGY QE+GIDYEETFA VARMTSVRSLLAV+AAKQWPL Q
Subjt: ------QKAMNDELQALDKIHTWDYVDLPPGKKLIGCKWIYKIKTHSDDTIEHYKARFVAKGYLQEYGIDYEETFAHVARMTSVRSLLAVSAAKQWPLFQ
Query: MDVKNAFLNGTLFEEVYMQPPPGTSPPPHKVCLLRRALYGLKQAPRTWFAIFSSTITQLGFSSSPHDTALFTRHTPQGIVLLLLYVDDIIITGNDSQDIS
MDVKNAFLNGTL EEVYM+PPPGTS PPHKVCLLRRALYGLKQAPR WFA FSSTITQLGF+SSPHDTALFTRHTPQGIVLLLLYVDD+IITGND Q IS
Subjt: MDVKNAFLNGTLFEEVYMQPPPGTSPPPHKVCLLRRALYGLKQAPRTWFAIFSSTITQLGFSSSPHDTALFTRHTPQGIVLLLLYVDDIIITGNDSQDIS
Query: DLQHYLSQYFEMKDLGSLNYFLGLEVSRRSDGYFL
DLQHYL Q+FEMKDLGSLNYFLGLEVSRRSDGY L
Subjt: DLQHYLSQYFEMKDLGSLNYFLGLEVSRRSDGYFL
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TI53 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.1e-173 | 97.47 | Show/hide |
Query: MFSRLSSFHSSFSSPQPFFTDTSVELFPLSESTLDTELAQSAPTSANSNQSSISDYGPEPTPDTPPRRST--------QKAMNDELQALDKIHTWDYVDL
MFSRLSSFHSSFSSPQPFFTDTSVELFPLSESTLDTELAQSAPTSANSNQSSISDYGPEPTPDTPPRRST QKAMNDELQALDKIHTWDYVDL
Subjt: MFSRLSSFHSSFSSPQPFFTDTSVELFPLSESTLDTELAQSAPTSANSNQSSISDYGPEPTPDTPPRRST--------QKAMNDELQALDKIHTWDYVDL
Query: PPGKKLIGCKWIYKIKTHSDDTIEHYKARFVAKGYLQEYGIDYEETFAHVARMTSVRSLLAVSAAKQWPLFQMDVKNAFLNGTLFEEVYMQPPPGTSPPP
PPGKKLIGCKWIYKIKTHSDDTIEHYKARFVAKGYLQEYGIDYEETFAHVARMTSVRSLLAVSAAKQWPLFQMDVKNAFLNGTLFEEVYMQPPPGTSPPP
Subjt: PPGKKLIGCKWIYKIKTHSDDTIEHYKARFVAKGYLQEYGIDYEETFAHVARMTSVRSLLAVSAAKQWPLFQMDVKNAFLNGTLFEEVYMQPPPGTSPPP
Query: HKVCLLRRALYGLKQAPRTWFAIFSSTITQLGFSSSPHDTALFTRHTPQGIVLLLLYVDDIIITGNDSQDISDLQHYLSQYFEMKDLGSLNYFLGLEVSR
HKVCLLRRALYGLKQAPRTWFAIFSSTITQLGFSSSPHDTALFTRHTPQGIVLLLLYVDDIIITGNDSQDISDLQHYLSQYFEMKDLGSLNYFLGLEVSR
Subjt: HKVCLLRRALYGLKQAPRTWFAIFSSTITQLGFSSSPHDTALFTRHTPQGIVLLLLYVDDIIITGNDSQDISDLQHYLSQYFEMKDLGSLNYFLGLEVSR
Query: RSDGYFLLTPTQLRHH
RSDGYFLLTPTQLRHH
Subjt: RSDGYFLLTPTQLRHH
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| A0A5A7VBA1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 7.0e-141 | 78.51 | Show/hide |
Query: MFSRLSSFHSSFSSPQPFFTDTSVELFPLSESTLDTELAQSAPTSANSNQSSISDYGPEPTPDTPPRRST------------------------------
MFSRLSSFH+SFSSPQPFFTDTS++LFP SES + ELAQSAPTSA SNQSSIS PEPTPDTPPRRST
Subjt: MFSRLSSFHSSFSSPQPFFTDTSVELFPLSESTLDTELAQSAPTSANSNQSSISDYGPEPTPDTPPRRST------------------------------
Query: ------QKAMNDELQALDKIHTWDYVDLPPGKKLIGCKWIYKIKTHSDDTIEHYKARFVAKGYLQEYGIDYEETFAHVARMTSVRSLLAVSAAKQWPLFQ
QKAMNDELQAL+K HTWDYVDLPPGK+ IGCKWIYKIKTHSD TIE YKAR VAKGY QEYGIDYEETFA VARMTSVRSLLAV+AAKQWPL Q
Subjt: ------QKAMNDELQALDKIHTWDYVDLPPGKKLIGCKWIYKIKTHSDDTIEHYKARFVAKGYLQEYGIDYEETFAHVARMTSVRSLLAVSAAKQWPLFQ
Query: MDVKNAFLNGTLFEEVYMQPPPGTSPPPHKVCLLRRALYGLKQAPRTWFAIFSSTITQLGFSSSPHDTALFTRHTPQGIVLLLLYVDDIIITGNDSQDIS
MDVKNAFLNGTL EEVYM+PP GTS PPHKVCLLRRALYGLKQAPR WFA FSSTITQLGF+SSPHDTALFTRHTPQGIVLLLLYVDD+IITGND Q IS
Subjt: MDVKNAFLNGTLFEEVYMQPPPGTSPPPHKVCLLRRALYGLKQAPRTWFAIFSSTITQLGFSSSPHDTALFTRHTPQGIVLLLLYVDDIIITGNDSQDIS
Query: DLQHYLSQYFEMKDLGSLNYFLGLEVSRRSDGYFL
DLQHYL Q+FEMKDLGSLNYFLGLEVSRRSDGY L
Subjt: DLQHYLSQYFEMKDLGSLNYFLGLEVSRRSDGYFL
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| A0A5A7VIT8 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 5.9e-140 | 77.91 | Show/hide |
Query: MFSRLSSFHSSFSSPQPFFTDTSVELFPLSESTLDTELAQSAPTSANSNQSSISDYGPEPTPDTPPRRST------------------------------
MFSRLSSFH+SFSSPQ FFTDTS++LFPLSEST ELAQSAPTSA S+QSSISD P+P PD PPRRST
Subjt: MFSRLSSFHSSFSSPQPFFTDTSVELFPLSESTLDTELAQSAPTSANSNQSSISDYGPEPTPDTPPRRST------------------------------
Query: ------QKAMNDELQALDKIHTWDYVDLPPGKKLIGCKWIYKIKTHSDDTIEHYKARFVAKGYLQEYGIDYEETFAHVARMTSVRSLLAVSAAKQWPLFQ
QKAMNDELQAL+K+HTWDYVDLPPGK+ IGCKWIYKIKTHSD TIE YKAR VAKGY QEYGIDYEETFA VARMTSVRSLLAV+AAKQWPL Q
Subjt: ------QKAMNDELQALDKIHTWDYVDLPPGKKLIGCKWIYKIKTHSDDTIEHYKARFVAKGYLQEYGIDYEETFAHVARMTSVRSLLAVSAAKQWPLFQ
Query: MDVKNAFLNGTLFEEVYMQPPPGTSPPPHKVCLLRRALYGLKQAPRTWFAIFSSTITQLGFSSSPHDTALFTRHTPQGIVLLLLYVDDIIITGNDSQDIS
MDVKNAFLNGTL EEVYM+PPPGTS PPHKVCLLRRALYGLKQAPR WFA FSSTITQLGF+SSPHDTALFTRHTPQGIVLLLLYVDD+IITGND IS
Subjt: MDVKNAFLNGTLFEEVYMQPPPGTSPPPHKVCLLRRALYGLKQAPRTWFAIFSSTITQLGFSSSPHDTALFTRHTPQGIVLLLLYVDDIIITGNDSQDIS
Query: DLQHYLSQYFEMKDLGSLNYFLGLEVSRRSDGYFL
DLQHYL Q+FEMKDLGSLNYFLGLEVSRRSDGY L
Subjt: DLQHYLSQYFEMKDLGSLNYFLGLEVSRRSDGYFL
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| A0A5D3D7V8 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 5.9e-140 | 77.91 | Show/hide |
Query: MFSRLSSFHSSFSSPQPFFTDTSVELFPLSESTLDTELAQSAPTSANSNQSSISDYGPEPTPDTPPRRST------------------------------
MFSRLSSFH+SFSSPQ FFTDTS++LFPLSEST ELAQSAPTSA S+QSSISD P+P PD PPRRST
Subjt: MFSRLSSFHSSFSSPQPFFTDTSVELFPLSESTLDTELAQSAPTSANSNQSSISDYGPEPTPDTPPRRST------------------------------
Query: ------QKAMNDELQALDKIHTWDYVDLPPGKKLIGCKWIYKIKTHSDDTIEHYKARFVAKGYLQEYGIDYEETFAHVARMTSVRSLLAVSAAKQWPLFQ
QKAMNDELQAL+K+HTWDYVDLPPGK+ IGCKWIYKIKTHSD TIE YKAR VAKGY QEYGIDYEETFA VARMTSVRSLLAV+AAKQWPL Q
Subjt: ------QKAMNDELQALDKIHTWDYVDLPPGKKLIGCKWIYKIKTHSDDTIEHYKARFVAKGYLQEYGIDYEETFAHVARMTSVRSLLAVSAAKQWPLFQ
Query: MDVKNAFLNGTLFEEVYMQPPPGTSPPPHKVCLLRRALYGLKQAPRTWFAIFSSTITQLGFSSSPHDTALFTRHTPQGIVLLLLYVDDIIITGNDSQDIS
MDVKNAFLNGTL EEVYM+PPPGTS PPHKVCLLRRALYGLKQAPR WFA FSSTITQLGF+SSPHDTALFTRHTPQGIVLLLLYVDD+IITGND IS
Subjt: MDVKNAFLNGTLFEEVYMQPPPGTSPPPHKVCLLRRALYGLKQAPRTWFAIFSSTITQLGFSSSPHDTALFTRHTPQGIVLLLLYVDDIIITGNDSQDIS
Query: DLQHYLSQYFEMKDLGSLNYFLGLEVSRRSDGYFL
DLQHYL Q+FEMKDLGSLNYFLGLEVSRRSDGY L
Subjt: DLQHYLSQYFEMKDLGSLNYFLGLEVSRRSDGYFL
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| A0A5D3DD70 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.6e-140 | 77.91 | Show/hide |
Query: MFSRLSSFHSSFSSPQPFFTDTSVELFPLSESTLDTELAQSAPTSANSNQSSISDYGPEPTPDTPPRRST------------------------------
MFSRLSSFH+SFSSPQ FFTDTS++LFPL EST D ELAQSAPTSA S+QSSISD P+P+PD PPRRST
Subjt: MFSRLSSFHSSFSSPQPFFTDTSVELFPLSESTLDTELAQSAPTSANSNQSSISDYGPEPTPDTPPRRST------------------------------
Query: ------QKAMNDELQALDKIHTWDYVDLPPGKKLIGCKWIYKIKTHSDDTIEHYKARFVAKGYLQEYGIDYEETFAHVARMTSVRSLLAVSAAKQWPLFQ
QKAMNDELQAL+K HTWDYVDLPPGK+ IGCKWIYKIKTHSD TIE YKAR VAKGY QE+GIDYEETFA VARMTSVRSLLAV+AAKQWPL Q
Subjt: ------QKAMNDELQALDKIHTWDYVDLPPGKKLIGCKWIYKIKTHSDDTIEHYKARFVAKGYLQEYGIDYEETFAHVARMTSVRSLLAVSAAKQWPLFQ
Query: MDVKNAFLNGTLFEEVYMQPPPGTSPPPHKVCLLRRALYGLKQAPRTWFAIFSSTITQLGFSSSPHDTALFTRHTPQGIVLLLLYVDDIIITGNDSQDIS
MDVKNAFLNGTL EEVYM+PPPGTS PPHKVCLLRRALYGLKQAPR WFA FSSTITQLGF+SSPHDTALFTRHTPQGIVLLLLYVDD+IITGND Q IS
Subjt: MDVKNAFLNGTLFEEVYMQPPPGTSPPPHKVCLLRRALYGLKQAPRTWFAIFSSTITQLGFSSSPHDTALFTRHTPQGIVLLLLYVDDIIITGNDSQDIS
Query: DLQHYLSQYFEMKDLGSLNYFLGLEVSRRSDGYFL
DLQHYL Q+FEMKDLGSLNYFLGLEVSRRSDGY L
Subjt: DLQHYLSQYFEMKDLGSLNYFLGLEVSRRSDGYFL
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 1.0e-43 | 37.87 | Show/hide |
Query: RRSTQKAMNDELQALDKIHTWDYVDLPPGKKLIGCKWIYKIKTHSDDTIEHYKARFVAKGYLQEYGIDYEETFAHVARMTSVRSLLAVSAAKQWPLFQMD
+ S ++A+N EL A +TW P K ++ +W++ +K + YKAR VA+G+ Q+Y IDYEETFA VAR++S R +L++ + QMD
Subjt: RRSTQKAMNDELQALDKIHTWDYVDLPPGKKLIGCKWIYKIKTHSDDTIEHYKARFVAKGYLQEYGIDYEETFAHVARMTSVRSLLAVSAAKQWPLFQMD
Query: VKNAFLNGTLFEEVYMQPPPGTSPPPHKVCLLRRALYGLKQAPRTWFAIFSSTITQLGFSSSPHDTALF--TRHTPQGIVLLLLYVDDIIITGNDSQDIS
VK AFLNGTL EE+YM+ P G S VC L +A+YGLKQA R WF +F + + F +S D ++ + + +LLYVDD++I D ++
Subjt: VKNAFLNGTLFEEVYMQPPPGTSPPPHKVCLLRRALYGLKQAPRTWFAIFSSTITQLGFSSSPHDTALF--TRHTPQGIVLLLLYVDDIIITGNDSQDIS
Query: DLQHYLSQYFEMKDLGSLNYFLGLEVSRRSDGYFL
+ + YL + F M DL + +F+G+ + + D +L
Subjt: DLQHYLSQYFEMKDLGSLNYFLGLEVSRRSDGYFL
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 6.7e-48 | 41.56 | Show/hide |
Query: PPRRSTQKAMNDELQALDKIHTWDYVDLPPGKKLIGCKWIYKIKTHSDDTIEHYKARFVAKGYLQEYGIDYEETFAHVARMTSVRSLLAVSAAKQWPLFQ
P + KAM +E+++L K T+ V+LP GK+ + CKW++K+K D + YKAR V KG+ Q+ GID++E F+ V +MTS+R++L+++A+ + Q
Subjt: PPRRSTQKAMNDELQALDKIHTWDYVDLPPGKKLIGCKWIYKIKTHSDDTIEHYKARFVAKGYLQEYGIDYEETFAHVARMTSVRSLLAVSAAKQWPLFQ
Query: MDVKNAFLNGTLFEEVYMQPPPG--TSPPPHKVCLLRRALYGLKQAPRTWFAIFSSTITQLGFSSSPHDTAL-FTRHTPQGIVLLLLYVDDIIITGNDSQ
+DVK AFL+G L EE+YM+ P G + H VC L ++LYGLKQAPR W+ F S + + + D + F R + ++LLLYVDD++I G D
Subjt: MDVKNAFLNGTLFEEVYMQPPPG--TSPPPHKVCLLRRALYGLKQAPRTWFAIFSSTITQLGFSSSPHDTAL-FTRHTPQGIVLLLLYVDDIIITGNDSQ
Query: DISDLQHYLSQYFEMKDLGSLNYFLGLEVSR
I+ L+ LS+ F+MKDLG LG+++ R
Subjt: DISDLQHYLSQYFEMKDLGSLNYFLGLEVSR
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| P25600 Putative transposon Ty5-1 protein YCL074W | 7.2e-18 | 34.53 | Show/hide |
Query: MDVKNAFLNGTLFEEVYMQPPPG--TSPPPHKVCLLRRALYGLKQAPRTWFAIFSSTITQLGFSSSPHDTALFTRHTPQGIVLLLLYVDDIIITGNDSQD
MDV AFLN T+ E +Y++ PPG P V L +YGLKQAP W ++T+ ++GF + L+ R T G + + +YVDD+++ +
Subjt: MDVKNAFLNGTLFEEVYMQPPPG--TSPPPHKVCLLRRALYGLKQAPRTWFAIFSSTITQLGFSSSPHDTALFTRHTPQGIVLLLLYVDDIIITGNDSQD
Query: ISDLQHYLSQYFEMKDLGSLNYFLGLEVSRRSDGYFLLT
++ L++ + MKDLG ++ FLGL + + S+G L+
Subjt: ISDLQHYLSQYFEMKDLGSLNYFLGLEVSRRSDGYFLLT
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.3e-54 | 46.98 | Show/hide |
Query: QKAMNDELQALDKIHTWDYVDLPPGK-KLIGCKWIYKIKTHSDDTIEHYKARFVAKGYLQEYGIDYEETFAHVARMTSVRSLLAVSAAKQWPLFQMDVKN
+ AM E+ A HTWD V PP ++GC+WI+ K +SD ++ YKAR VAKGY Q G+DY ETF+ V + TS+R +L V+ + WP+ Q+DV N
Subjt: QKAMNDELQALDKIHTWDYVDLPPGK-KLIGCKWIYKIKTHSDDTIEHYKARFVAKGYLQEYGIDYEETFAHVARMTSVRSLLAVSAAKQWPLFQMDVKN
Query: AFLNGTLFEEVYMQPPPG--TSPPPHKVCLLRRALYGLKQAPRTWFAIFSSTITQLGFSSSPHDTALFTRHTPQGIVLLLLYVDDIIITGNDSQDISDLQ
AFL GTL ++VYM PPG P+ VC LR+ALYGLKQAPR W+ + + +GF +S DT+LF + IV +L+YVDDI+ITGND + +
Subjt: AFLNGTLFEEVYMQPPPG--TSPPPHKVCLLRRALYGLKQAPRTWFAIFSSTITQLGFSSSPHDTALFTRHTPQGIVLLLLYVDDIIITGNDSQDISDLQ
Query: HYLSQYFEMKDLGSLNYFLGLEVSRRSDGYFL
LSQ F +KD L+YFLG+E R G L
Subjt: HYLSQYFEMKDLGSLNYFLGLEVSRRSDGYFL
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 8.1e-54 | 46.12 | Show/hide |
Query: QKAMNDELQALDKIHTWDYV-DLPPGKKLIGCKWIYKIKTHSDDTIEHYKARFVAKGYLQEYGIDYEETFAHVARMTSVRSLLAVSAAKQWPLFQMDVKN
++AM E+ A HTWD V PP ++GC+WI+ K +SD ++ YKAR VAKGY Q G+DY ETF+ V + TS+R +L V+ + WP+ Q+DV N
Subjt: QKAMNDELQALDKIHTWDYV-DLPPGKKLIGCKWIYKIKTHSDDTIEHYKARFVAKGYLQEYGIDYEETFAHVARMTSVRSLLAVSAAKQWPLFQMDVKN
Query: AFLNGTLFEEVYMQPPPG--TSPPPHKVCLLRRALYGLKQAPRTWFAIFSSTITQLGFSSSPHDTALFTRHTPQGIVLLLLYVDDIIITGNDSQDISDLQ
AFL GTL +EVYM PPG P VC LR+A+YGLKQAPR W+ + + +GF +S DT+LF + I+ +L+YVDDI+ITGND+ +
Subjt: AFLNGTLFEEVYMQPPPG--TSPPPHKVCLLRRALYGLKQAPRTWFAIFSSTITQLGFSSSPHDTALFTRHTPQGIVLLLLYVDDIIITGNDSQDISDLQ
Query: HYLSQYFEMKDLGSLNYFLGLEVSRRSDGYFL
LSQ F +K+ L+YFLG+E R G L
Subjt: HYLSQYFEMKDLGSLNYFLGLEVSRRSDGYFL
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | 1.3e-62 | 50.43 | Show/hide |
Query: AMNDELQALDKIHTWDYVDLPPGKKLIGCKWIYKIKTHSDDTIEHYKARFVAKGYLQEYGIDYEETFAHVARMTSVRSLLAVSAAKQWPLFQMDVKNAFL
AM+DE+ A++ HTW+ LPP KK IGCKW+YKIK +SD TIE YKAR VAKGY Q+ GID+ ETF+ V ++TSV+ +LA+SA + L Q+D+ NAFL
Subjt: AMNDELQALDKIHTWDYVDLPPGKKLIGCKWIYKIKTHSDDTIEHYKARFVAKGYLQEYGIDYEETFAHVARMTSVRSLLAVSAAKQWPLFQMDVKNAFL
Query: NGTLFEEVYMQPPP------GTSPPPHKVCLLRRALYGLKQAPRTWFAIFSSTITQLGFSSSPHDTALFTRHTPQGIVLLLLYVDDIIITGNDSQDISDL
NG L EE+YM+ PP G S PP+ VC L++++YGLKQA R WF FS T+ GF S D F + T + +L+YVDDIII N+ + +L
Subjt: NGTLFEEVYMQPPP------GTSPPPHKVCLLRRALYGLKQAPRTWFAIFSSTITQLGFSSSPHDTALFTRHTPQGIVLLLLYVDDIIITGNDSQDISDL
Query: QHYLSQYFEMKDLGSLNYFLGLEVSRRSDG
+ L F+++DLG L YFLGLE++R + G
Subjt: QHYLSQYFEMKDLGSLNYFLGLEVSRRSDG
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| ATMG00810.1 DNA/RNA polymerases superfamily protein | 1.2e-07 | 48.15 | Show/hide |
Query: LLLYVDDIIITGNDSQDISDLQHYLSQYFEMKDLGSLNYFLGLEVSRRSDGYFL
LLLYVDDI++TG+ + ++ L LS F MKDLG ++YFLG+++ G FL
Subjt: LLLYVDDIIITGNDSQDISDLQHYLSQYFEMKDLGSLNYFLGLEVSRRSDGYFL
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| ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase) | 3.7e-17 | 45.24 | Show/hide |
Query: KAMNDELQALDKIHTWDYVDLPPGKKLIGCKWIYKIKTHSDDTIEHYKARFVAKGYLQEYGIDYEETFAHVARMTSVRSLLAVS
+AM +EL AL + TW V P + ++GCKW++K K HSD T++ KAR VAKG+ QE GI + ET++ V R ++R++L V+
Subjt: KAMNDELQALDKIHTWDYVDLPPGKKLIGCKWIYKIKTHSDDTIEHYKARFVAKGYLQEYGIDYEETFAHVARMTSVRSLLAVS
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