| GenBank top hits | e value | %identity | Alignment |
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| KAA0037581.1 reverse transcriptase [Cucumis melo var. makuwa] | 7.4e-83 | 69.12 | Show/hide |
Query: MRLCIDYRQLNKVTIKNKYTLSRIDDLFDQLKGASVFSKIDLCSGYCQLRIKKLNVPKITCRTHYGHYKFLVMPFGLTNAPTTFMDLMNRVFHHYLDQFA
+RLCIDYRQLNKVTI+NKY L RIDDLFDQL+GA VFSKIDL SGY QL+++K N+PK RT YGHY+FLVMPFGLTNAP FMDL+NR+FH YLDQF
Subjt: MRLCIDYRQLNKVTIKNKYTLSRIDDLFDQLKGASVFSKIDLCSGYCQLRIKKLNVPKITCRTHYGHYKFLVMPFGLTNAPTTFMDLMNRVFHHYLDQFA
Query: IVFNDDILVYFLDVKRHAEHLRIILQTVREEKLFAKFSKCEFWLNQVVFLGHIISSEGLKVDSQKVVAIETWNGTKTIFEVRSFLGLTGYYMQFVEGFFK
IVF DDILVY +D K H EHLRI+LQ +R+++L+ KFSKCEFWLNQVVFLGH++S+ G+ VD QKV + W + EVRSFLGL GYY +FVE F +
Subjt: IVFNDDILVYFLDVKRHAEHLRIILQTVREEKLFAKFSKCEFWLNQVVFLGHIISSEGLKVDSQKVVAIETWNGTKTIFEVRSFLGLTGYYMQFVEGFFK
Query: LALPLTTLTRKETKFEW
LALPLT LTRK +FEW
Subjt: LALPLTTLTRKETKFEW
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| KAA0045363.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] | 2.2e-82 | 68.35 | Show/hide |
Query: MRLCIDYRQLNKVTIKNKYTLSRIDDLFDQLKGASVFSKIDLCSGYCQLRIKKLNVPKITCRTHYGHYKFLVMPFGLTNAPTTFMDLMNRVFHHYLDQFA
+RLCIDYRQLNKVTI+NKY L RIDDLFDQL+GA++FSKIDL SGY QL++++ ++ K + RT YGHY+F VMPFGLTNAP FMDLMNR+FH YLDQF
Subjt: MRLCIDYRQLNKVTIKNKYTLSRIDDLFDQLKGASVFSKIDLCSGYCQLRIKKLNVPKITCRTHYGHYKFLVMPFGLTNAPTTFMDLMNRVFHHYLDQFA
Query: IVFNDDILVYFLDVKRHAEHLRIILQTVREEKLFAKFSKCEFWLNQVVFLGHIISSEGLKVDSQKVVAIETWNGTKTIFEVRSFLGLTGYYMQFVEGFFK
IVF DDILVY +D + H EHLRI+LQT+RE++L+AKFSKCEFWL QVVFLGH++S++G+ VD QKV A+ W + EVRSFLGL GYY +F+E F +
Subjt: IVFNDDILVYFLDVKRHAEHLRIILQTVREEKLFAKFSKCEFWLNQVVFLGHIISSEGLKVDSQKVVAIETWNGTKTIFEVRSFLGLTGYYMQFVEGFFK
Query: LALPLTTLTRKETKFEWS
LALPLT LTRK KFEWS
Subjt: LALPLTTLTRKETKFEWS
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| KAA0060440.1 retrotransposon protein [Cucumis melo var. makuwa] | 2.2e-82 | 68.81 | Show/hide |
Query: MRLCIDYRQLNKVTIKNKYTLSRIDDLFDQLKGASVFSKIDLCSGYCQLRIKKLNVPKITCRTHYGHYKFLVMPFGLTNAPTTFMDLMNRVFHHYLDQFA
+RLCIDYRQLNKVTI+NKY L RIDDLFDQL+GA++FSKIDL SGY QL++++ ++ K RT YGHY+F VMPFGLTNAP FMDLMNR+FH YLDQF
Subjt: MRLCIDYRQLNKVTIKNKYTLSRIDDLFDQLKGASVFSKIDLCSGYCQLRIKKLNVPKITCRTHYGHYKFLVMPFGLTNAPTTFMDLMNRVFHHYLDQFA
Query: IVFNDDILVYFLDVKRHAEHLRIILQTVREEKLFAKFSKCEFWLNQVVFLGHIISSEGLKVDSQKVVAIETWNGTKTIFEVRSFLGLTGYYMQFVEGFFK
IVF DDILVY +D + H EHLRI+LQT+RE++L+AKFSKCEFWL QVVFLGH++S++G+ VD QKV AI W + EVRSFLGL GYY +F+E F +
Subjt: IVFNDDILVYFLDVKRHAEHLRIILQTVREEKLFAKFSKCEFWLNQVVFLGHIISSEGLKVDSQKVVAIETWNGTKTIFEVRSFLGLTGYYMQFVEGFFK
Query: LALPLTTLTRKETKFEWS
LALPLT LTRK KFEWS
Subjt: LALPLTTLTRKETKFEWS
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| TYK03091.1 reverse transcriptase [Cucumis melo var. makuwa] | 7.4e-83 | 69.12 | Show/hide |
Query: MRLCIDYRQLNKVTIKNKYTLSRIDDLFDQLKGASVFSKIDLCSGYCQLRIKKLNVPKITCRTHYGHYKFLVMPFGLTNAPTTFMDLMNRVFHHYLDQFA
+RLCIDYRQLNKVTI+NKY L RIDDLFDQL+GA VFSKIDL SGY QL+++K N+PK RT YGHY+FLVMPFGLTNAP FMDL+NR+FH YLDQF
Subjt: MRLCIDYRQLNKVTIKNKYTLSRIDDLFDQLKGASVFSKIDLCSGYCQLRIKKLNVPKITCRTHYGHYKFLVMPFGLTNAPTTFMDLMNRVFHHYLDQFA
Query: IVFNDDILVYFLDVKRHAEHLRIILQTVREEKLFAKFSKCEFWLNQVVFLGHIISSEGLKVDSQKVVAIETWNGTKTIFEVRSFLGLTGYYMQFVEGFFK
IVF DDILVY +D K H EHLRI+LQ +R+++L+ KFSKCEFWLNQVVFLGH++S+ G+ VD QKV + W + EVRSFLGL GYY +FVE F +
Subjt: IVFNDDILVYFLDVKRHAEHLRIILQTVREEKLFAKFSKCEFWLNQVVFLGHIISSEGLKVDSQKVVAIETWNGTKTIFEVRSFLGLTGYYMQFVEGFFK
Query: LALPLTTLTRKETKFEW
LALPLT LTRK +FEW
Subjt: LALPLTTLTRKETKFEW
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| TYK05031.1 reverse transcriptase [Cucumis melo var. makuwa] | 1.3e-82 | 68.35 | Show/hide |
Query: MRLCIDYRQLNKVTIKNKYTLSRIDDLFDQLKGASVFSKIDLCSGYCQLRIKKLNVPKITCRTHYGHYKFLVMPFGLTNAPTTFMDLMNRVFHHYLDQFA
+RLCIDYRQLNKVTI+NKY L RIDDLFDQLKGA+VFSKIDL GY QL++++ ++PK RT YGHY+FLVMPFGLTNAP FM+LMNR+FH YLDQF
Subjt: MRLCIDYRQLNKVTIKNKYTLSRIDDLFDQLKGASVFSKIDLCSGYCQLRIKKLNVPKITCRTHYGHYKFLVMPFGLTNAPTTFMDLMNRVFHHYLDQFA
Query: IVFNDDILVYFLDVKRHAEHLRIILQTVREEKLFAKFSKCEFWLNQVVFLGHIISSEGLKVDSQKVVAIETWNGTKTIFEVRSFLGLTGYYMQFVEGFFK
IVF DDILVY +D K H EHLRI+LQT+R+++L+AKFSKCE WLNQVVFLGH++S++G+ VD QKV + W + EV SFLGL GYY +F+E F +
Subjt: IVFNDDILVYFLDVKRHAEHLRIILQTVREEKLFAKFSKCEFWLNQVVFLGHIISSEGLKVDSQKVVAIETWNGTKTIFEVRSFLGLTGYYMQFVEGFFK
Query: LALPLTTLTRKETKFEWS
LALPLT LTRK KFEWS
Subjt: LALPLTTLTRKETKFEWS
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7T7M6 Reverse transcriptase | 3.6e-83 | 69.12 | Show/hide |
Query: MRLCIDYRQLNKVTIKNKYTLSRIDDLFDQLKGASVFSKIDLCSGYCQLRIKKLNVPKITCRTHYGHYKFLVMPFGLTNAPTTFMDLMNRVFHHYLDQFA
+RLCIDYRQLNKVTI+NKY L RIDDLFDQL+GA VFSKIDL SGY QL+++K N+PK RT YGHY+FLVMPFGLTNAP FMDL+NR+FH YLDQF
Subjt: MRLCIDYRQLNKVTIKNKYTLSRIDDLFDQLKGASVFSKIDLCSGYCQLRIKKLNVPKITCRTHYGHYKFLVMPFGLTNAPTTFMDLMNRVFHHYLDQFA
Query: IVFNDDILVYFLDVKRHAEHLRIILQTVREEKLFAKFSKCEFWLNQVVFLGHIISSEGLKVDSQKVVAIETWNGTKTIFEVRSFLGLTGYYMQFVEGFFK
IVF DDILVY +D K H EHLRI+LQ +R+++L+ KFSKCEFWLNQVVFLGH++S+ G+ VD QKV + W + EVRSFLGL GYY +FVE F +
Subjt: IVFNDDILVYFLDVKRHAEHLRIILQTVREEKLFAKFSKCEFWLNQVVFLGHIISSEGLKVDSQKVVAIETWNGTKTIFEVRSFLGLTGYYMQFVEGFFK
Query: LALPLTTLTRKETKFEW
LALPLT LTRK +FEW
Subjt: LALPLTTLTRKETKFEW
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| A0A5A7TP97 Reverse transcriptase | 1.0e-82 | 68.35 | Show/hide |
Query: MRLCIDYRQLNKVTIKNKYTLSRIDDLFDQLKGASVFSKIDLCSGYCQLRIKKLNVPKITCRTHYGHYKFLVMPFGLTNAPTTFMDLMNRVFHHYLDQFA
+RLCIDYRQLNKVTI+NKY L RIDDLFDQL+GA++FSKIDL SGY QL++++ ++ K + RT YGHY+F VMPFGLTNAP FMDLMNR+FH YLDQF
Subjt: MRLCIDYRQLNKVTIKNKYTLSRIDDLFDQLKGASVFSKIDLCSGYCQLRIKKLNVPKITCRTHYGHYKFLVMPFGLTNAPTTFMDLMNRVFHHYLDQFA
Query: IVFNDDILVYFLDVKRHAEHLRIILQTVREEKLFAKFSKCEFWLNQVVFLGHIISSEGLKVDSQKVVAIETWNGTKTIFEVRSFLGLTGYYMQFVEGFFK
IVF DDILVY +D + H EHLRI+LQT+RE++L+AKFSKCEFWL QVVFLGH++S++G+ VD QKV A+ W + EVRSFLGL GYY +F+E F +
Subjt: IVFNDDILVYFLDVKRHAEHLRIILQTVREEKLFAKFSKCEFWLNQVVFLGHIISSEGLKVDSQKVVAIETWNGTKTIFEVRSFLGLTGYYMQFVEGFFK
Query: LALPLTTLTRKETKFEWS
LALPLT LTRK KFEWS
Subjt: LALPLTTLTRKETKFEWS
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| A0A5A7UZA9 Retrotransposon protein | 1.0e-82 | 68.81 | Show/hide |
Query: MRLCIDYRQLNKVTIKNKYTLSRIDDLFDQLKGASVFSKIDLCSGYCQLRIKKLNVPKITCRTHYGHYKFLVMPFGLTNAPTTFMDLMNRVFHHYLDQFA
+RLCIDYRQLNKVTI+NKY L RIDDLFDQL+GA++FSKIDL SGY QL++++ ++ K RT YGHY+F VMPFGLTNAP FMDLMNR+FH YLDQF
Subjt: MRLCIDYRQLNKVTIKNKYTLSRIDDLFDQLKGASVFSKIDLCSGYCQLRIKKLNVPKITCRTHYGHYKFLVMPFGLTNAPTTFMDLMNRVFHHYLDQFA
Query: IVFNDDILVYFLDVKRHAEHLRIILQTVREEKLFAKFSKCEFWLNQVVFLGHIISSEGLKVDSQKVVAIETWNGTKTIFEVRSFLGLTGYYMQFVEGFFK
IVF DDILVY +D + H EHLRI+LQT+RE++L+AKFSKCEFWL QVVFLGH++S++G+ VD QKV AI W + EVRSFLGL GYY +F+E F +
Subjt: IVFNDDILVYFLDVKRHAEHLRIILQTVREEKLFAKFSKCEFWLNQVVFLGHIISSEGLKVDSQKVVAIETWNGTKTIFEVRSFLGLTGYYMQFVEGFFK
Query: LALPLTTLTRKETKFEWS
LALPLT LTRK KFEWS
Subjt: LALPLTTLTRKETKFEWS
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| A0A5D3BTP3 Reverse transcriptase | 3.6e-83 | 69.12 | Show/hide |
Query: MRLCIDYRQLNKVTIKNKYTLSRIDDLFDQLKGASVFSKIDLCSGYCQLRIKKLNVPKITCRTHYGHYKFLVMPFGLTNAPTTFMDLMNRVFHHYLDQFA
+RLCIDYRQLNKVTI+NKY L RIDDLFDQL+GA VFSKIDL SGY QL+++K N+PK RT YGHY+FLVMPFGLTNAP FMDL+NR+FH YLDQF
Subjt: MRLCIDYRQLNKVTIKNKYTLSRIDDLFDQLKGASVFSKIDLCSGYCQLRIKKLNVPKITCRTHYGHYKFLVMPFGLTNAPTTFMDLMNRVFHHYLDQFA
Query: IVFNDDILVYFLDVKRHAEHLRIILQTVREEKLFAKFSKCEFWLNQVVFLGHIISSEGLKVDSQKVVAIETWNGTKTIFEVRSFLGLTGYYMQFVEGFFK
IVF DDILVY +D K H EHLRI+LQ +R+++L+ KFSKCEFWLNQVVFLGH++S+ G+ VD QKV + W + EVRSFLGL GYY +FVE F +
Subjt: IVFNDDILVYFLDVKRHAEHLRIILQTVREEKLFAKFSKCEFWLNQVVFLGHIISSEGLKVDSQKVVAIETWNGTKTIFEVRSFLGLTGYYMQFVEGFFK
Query: LALPLTTLTRKETKFEW
LALPLT LTRK +FEW
Subjt: LALPLTTLTRKETKFEW
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| A0A5D3BZC5 Reverse transcriptase | 6.1e-83 | 68.35 | Show/hide |
Query: MRLCIDYRQLNKVTIKNKYTLSRIDDLFDQLKGASVFSKIDLCSGYCQLRIKKLNVPKITCRTHYGHYKFLVMPFGLTNAPTTFMDLMNRVFHHYLDQFA
+RLCIDYRQLNKVTI+NKY L RIDDLFDQLKGA+VFSKIDL GY QL++++ ++PK RT YGHY+FLVMPFGLTNAP FM+LMNR+FH YLDQF
Subjt: MRLCIDYRQLNKVTIKNKYTLSRIDDLFDQLKGASVFSKIDLCSGYCQLRIKKLNVPKITCRTHYGHYKFLVMPFGLTNAPTTFMDLMNRVFHHYLDQFA
Query: IVFNDDILVYFLDVKRHAEHLRIILQTVREEKLFAKFSKCEFWLNQVVFLGHIISSEGLKVDSQKVVAIETWNGTKTIFEVRSFLGLTGYYMQFVEGFFK
IVF DDILVY +D K H EHLRI+LQT+R+++L+AKFSKCE WLNQVVFLGH++S++G+ VD QKV + W + EV SFLGL GYY +F+E F +
Subjt: IVFNDDILVYFLDVKRHAEHLRIILQTVREEKLFAKFSKCEFWLNQVVFLGHIISSEGLKVDSQKVVAIETWNGTKTIFEVRSFLGLTGYYMQFVEGFFK
Query: LALPLTTLTRKETKFEWS
LALPLT LTRK KFEWS
Subjt: LALPLTTLTRKETKFEWS
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04323 Retrovirus-related Pol polyprotein from transposon 17.6 | 2.0e-38 | 33.95 | Show/hide |
Query: RLCIDYRQLNKVTIKNKYTLSRIDDLFDQLKGASVFSKIDLCSGYCQLRIKKLNVPKITCRTHYGHYKFLVMPFGLTNAPTTFMDLMNRVFHHYLDQFAI
R+ IDYR+LN++T+ +++ + +D++ +L + F+ IDL G+ Q+ + +V K T +GHY++L MPFGL NAP TF MN + L++ +
Subjt: RLCIDYRQLNKVTIKNKYTLSRIDDLFDQLKGASVFSKIDLCSGYCQLRIKKLNVPKITCRTHYGHYKFLVMPFGLTNAPTTFMDLMNRVFHHYLDQFAI
Query: VFNDDILVYFLDVKRHAEHLRIILQTVREEKLFAKFSKCEFWLNQVVFLGHIISSEGLKVDSQKVVAIETWNGTKTIFEVRSFLGLTGYYMQFVEGFFKL
V+ DDI+V+ + H + L ++ + + + L + KCEF + FLGH+++ +G+K + +K+ AI+ + E+++FLGLTGYY +F+ F +
Subjt: VFNDDILVYFLDVKRHAEHLRIILQTVREEKLFAKFSKCEFWLNQVVFLGHIISSEGLKVDSQKVVAIETWNGTKTIFEVRSFLGLTGYYMQFVEGFFKL
Query: ALPLTTLTRKETKFE
A P+T +K K +
Subjt: ALPLTTLTRKETKFE
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| P0CT41 Transposon Tf2-12 polyprotein | 2.8e-32 | 30.73 | Show/hide |
Query: MRLCIDYRQLNKVTIKNKYTLSRIDDLFDQLKGASVFSKIDLCSGYCQLRIKKLNVPKITCRTHYGHYKFLVMPFGLTNAPTTFMDLMNRVFHHYLDQFA
+R+ +DY+ LNK N Y L I+ L +++G+++F+K+DL S Y +R++K + K+ R G +++LVMP+G++ AP F +N + +
Subjt: MRLCIDYRQLNKVTIKNKYTLSRIDDLFDQLKGASVFSKIDLCSGYCQLRIKKLNVPKITCRTHYGHYKFLVMPFGLTNAPTTFMDLMNRVFHHYLDQFA
Query: IVFNDDILVYFLDVKRHAEHLRIILQTVREEKLFAKFSKCEFWLNQVVFLGHIISSEGLKVDSQKVVAIETWNGTKTIFEVRSFLGLTGYYMQFVEGFFK
+ + DDIL++ H +H++ +LQ ++ L +KCEF +QV F+G+ IS +G + + + W K E+R FLG Y +F+ +
Subjt: IVFNDDILVYFLDVKRHAEHLRIILQTVREEKLFAKFSKCEFWLNQVVFLGHIISSEGLKVDSQKVVAIETWNGTKTIFEVRSFLGLTGYYMQFVEGFFK
Query: LALPLTTLTRKETKFEWS
L PL L +K+ +++W+
Subjt: LALPLTTLTRKETKFEWS
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| P20825 Retrovirus-related Pol polyprotein from transposon 297 | 1.5e-38 | 34.88 | Show/hide |
Query: RLCIDYRQLNKVTIKNKYTLSRIDDLFDQLKGASVFSKIDLCSGYCQLRIKKLNVPKITCRTHYGHYKFLVMPFGLTNAPTTFMDLMNRVFHHYLDQFAI
R+ IDYR+LN++TI ++Y + +D++ +L F+ IDL G+ Q+ + + ++ K T GHY++L MPFGL NAP TF MN + L++ +
Subjt: RLCIDYRQLNKVTIKNKYTLSRIDDLFDQLKGASVFSKIDLCSGYCQLRIKKLNVPKITCRTHYGHYKFLVMPFGLTNAPTTFMDLMNRVFHHYLDQFAI
Query: VFNDDILVYFLDVKRHAEHLRIILQTVREEKLFAKFSKCEFWLNQVVFLGHIISSEGLKVDSQKVVAIETWNGTKTIFEVRSFLGLTGYYMQFVEGFFKL
V+ DDI+++ + H ++++ + + L + KCEF + FLGHI++ +G+K + KV AI ++ E+R+FLGLTGYY +F+ + +
Subjt: VFNDDILVYFLDVKRHAEHLRIILQTVREEKLFAKFSKCEFWLNQVVFLGHIISSEGLKVDSQKVVAIETWNGTKTIFEVRSFLGLTGYYMQFVEGFFKL
Query: ALPLTTLTRKETKFE
A P+T+ +K TK +
Subjt: ALPLTTLTRKETKFE
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| P31843 RNA-directed DNA polymerase homolog | 1.7e-34 | 53.85 | Show/hide |
Query: MRLCIDYRQLNKVTIKNKYTLSRIDDLFDQLKGASVFSKIDLCSGYCQLRIKKLNVPKITCRTHYGHYKFLVMPFGLTNAPTTFMDLMNRVFHHYLDQFA
+R+CIDYR L KVTIKNKY + R+DDLFD+L A+ F+K+DL SGY Q+RI K + PK TC T YG ++F VMPFGLTNA TF +LMN V + YLD F
Subjt: MRLCIDYRQLNKVTIKNKYTLSRIDDLFDQLKGASVFSKIDLCSGYCQLRIKKLNVPKITCRTHYGHYKFLVMPFGLTNAPTTFMDLMNRVFHHYLDQFA
Query: IVFNDDILVYFL---DVKRHAEHLRIILQT
+V+ DD++VY + + H +HLR++ ++
Subjt: IVFNDDILVYFL---DVKRHAEHLRIILQT
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| Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus | 4.1e-36 | 35.89 | Show/hide |
Query: RLCIDYRQLNKVTIKNKYTLSRIDDLFDQLKGASVFSKIDLCSGYCQLRIKKLNVPKITCRTHYGHYKFLVMPFGLTNAPTTFMDLMNRVFHHYLDQFAI
R+ +D+++LN VTI + Y + I+ L A F+ +DL SG+ Q+ +K+ ++PK T G Y+FL +PFGL NAP F +++ + ++ +
Subjt: RLCIDYRQLNKVTIKNKYTLSRIDDLFDQLKGASVFSKIDLCSGYCQLRIKKLNVPKITCRTHYGHYKFLVMPFGLTNAPTTFMDLMNRVFHHYLDQFAI
Query: VFNDDILVYFLDVKRHAEHLRIILQTVREEKLFAKFSKCEFWLNQVVFLGHIISSEGLKVDSQKVVAIETWNGTKTIFEVRSFLGLTGYYMQFVEGFFKL
V+ DDI+V+ D H ++LR++L ++ + L K F QV FLG+I++++G+K D +KV AI ++ E++ FLG+T YY +F++ + K+
Subjt: VFNDDILVYFLDVKRHAEHLRIILQTVREEKLFAKFSKCEFWLNQVVFLGHIISSEGLKVDSQKVVAIETWNGTKTIFEVRSFLGLTGYYMQFVEGFFKL
Query: ALPLTTLTR
A PLT LTR
Subjt: ALPLTTLTR
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