CuGenDBv2

Gene ID	Cmc08g0228381
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Genome location	CMiso1.1chr08:22527564..22529651
RNA-Seq Expression	Cmc08g0228381
Synteny	Cmc08g0228381
Gene Ontology terms	GO:0006278 - RNA-dependent DNA biosynthetic process (biological process) GO:0015074 - DNA integration (biological process) GO:0003676 - nucleic acid binding (molecular function) GO:0003964 - RNA-directed DNA polymerase activity (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR000477 - Reverse transcriptase domain IPR001584 - Integrase, catalytic core IPR012337 - Ribonuclease H-like superfamily IPR036397 - Ribonuclease H superfamily IPR041577 - Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain IPR041588 - Integrase zinc-binding domain IPR043128 - Reverse transcriptase/Diguanylate cyclase domain IPR043502 - DNA/RNA polymerase superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0035455.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]

0.0e+00

98.56

Show/hide

Query:  MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRRAALFSKIDLRTGYHQLKVRESDIAK
        MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLR AALFSKIDLR+GYHQLKVRESDIAK
Subjt:  MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRRAALFSKIDLRTGYHQLKVRESDIAK

Query:  TAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKG
        TAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKG
Subjt:  TAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKG

Query:  VSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRHFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL
        VSVDPQKVEAVVNWERPISATEVRSFLGLAGYYR FIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL
Subjt:  VSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRHFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL

Query:  GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKTLNLRQRRCLELIKDYDCTIEYHSGKANVVADA
        GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQK LNLRQRR LELIKDYDCTIEYH GKANVVADA
Subjt:  GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKTLNLRQRRCLELIKDYDCTIEYHSGKANVVADA

Query:  LSRKSRLPKSALCGIRVAMLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELK
        LSRKSRLPKSALCGIRVA+LNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELK
Subjt:  LSRKSRLPKSALCGIRVAMLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELK

Query:  NAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIVEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRL
        NAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEI EYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRL
Subjt:  NAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIVEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRL

Query:  TKTTRFLPIKMTSTLDQLARLYDDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGS
        TKTTRF+PIKMTSTLDQLARLY DKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGS
Subjt:  TKTTRFLPIKMTSTLDQLARLYDDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGS

KAA0037582.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]

0.0e+00

98.56

Show/hide

Query:  MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRRAALFSKIDLRTGYHQLKVRESDIAK
        MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLR AALFSKIDLR+GYHQLKVRESDIAK
Subjt:  MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRRAALFSKIDLRTGYHQLKVRESDIAK

Query:  TAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKG
        TAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKG
Subjt:  TAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKG

Query:  VSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRHFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL
        VSVDPQKVEAVVNWERPISATEVRSFLGLAGYYR FIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL
Subjt:  VSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRHFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL

Query:  GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKTLNLRQRRCLELIKDYDCTIEYHSGKANVVADA
        GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQK LNLRQRR LELIKDYDCTIEYH GKANVVADA
Subjt:  GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKTLNLRQRRCLELIKDYDCTIEYHSGKANVVADA

Query:  LSRKSRLPKSALCGIRVAMLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELK
        LSRKSRLPKSALCGIRVA+LNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELK
Subjt:  LSRKSRLPKSALCGIRVAMLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELK

Query:  NAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIVEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRL
        NAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEI EYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRL
Subjt:  NAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIVEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRL

Query:  TKTTRFLPIKMTSTLDQLARLYDDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGS
        TKTTRF+PIKMTSTLDQLARLY DKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGS
Subjt:  TKTTRFLPIKMTSTLDQLARLYDDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGS

KAA0041108.1 reverse transcriptase [Cucumis melo var. makuwa]

0.0e+00

98.56

Show/hide

Query:  MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRRAALFSKIDLRTGYHQLKVRESDIAK
        MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLR AALFSKIDLR+GYHQLKVRESDIAK
Subjt:  MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRRAALFSKIDLRTGYHQLKVRESDIAK

Query:  TAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKG
        TAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKG
Subjt:  TAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKG

Query:  VSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRHFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL
        VSVDPQKVEAVVNWERPISATEVRSFLGLAGYYR FIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL
Subjt:  VSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRHFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL

Query:  GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKTLNLRQRRCLELIKDYDCTIEYHSGKANVVADA
        GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQK LNLRQRR LELIKDYDCTIEYH GKANVVADA
Subjt:  GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKTLNLRQRRCLELIKDYDCTIEYHSGKANVVADA

Query:  LSRKSRLPKSALCGIRVAMLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELK
        LSRKSRLPKSALCGIRVA+LNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELK
Subjt:  LSRKSRLPKSALCGIRVAMLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELK

Query:  NAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIVEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRL
        NAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEI EYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRL
Subjt:  NAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIVEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRL

Query:  TKTTRFLPIKMTSTLDQLARLYDDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGS
        TKTTRF+PIKMTSTLDQLARLY DKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGS
Subjt:  TKTTRFLPIKMTSTLDQLARLYDDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGS

KAA0044258.1 reverse transcriptase [Cucumis melo var. makuwa]

0.0e+00

99.28

Show/hide

Query:  MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRRAALFSKIDLRTGYHQLKVRESDIAK
        MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRRAALFSKIDLRTGYHQLKVRESDIAK
Subjt:  MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRRAALFSKIDLRTGYHQLKVRESDIAK

Query:  TAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKG
        TAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKG
Subjt:  TAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKG

Query:  VSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRHFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL
        VSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRHFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL
Subjt:  VSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRHFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL

Query:  GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKTLNLRQRRCLELIKDYDCTIEYHSGKANVVADA
        GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGE+CHIFTDHKSLKYIFDQK LNLRQRRCLELIKDYDCTIEYHSGKANVVADA
Subjt:  GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKTLNLRQRRCLELIKDYDCTIEYHSGKANVVADA

Query:  LSRKSRLPKSALCGIRVAMLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELK
        LSRKSRLPKSALCGIRVAMLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKK EKSKKGLEVEFELRTDGAIVKQGRLCVPNISELK
Subjt:  LSRKSRLPKSALCGIRVAMLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELK

Query:  NAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIVEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRL
        NAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEI EYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRL
Subjt:  NAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIVEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRL

Query:  TKTTRFLPIKMTSTLDQLARLYDDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGS
        TKTTRFLPIKMTSTLDQLARLY DKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGS
Subjt:  TKTTRFLPIKMTSTLDQLARLYDDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGS

KAA0056684.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]

0.0e+00

98.56

Show/hide

Query:  MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRRAALFSKIDLRTGYHQLKVRESDIAK
        MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLR AALFSKIDLR+GYHQLKVRESDIAK
Subjt:  MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRRAALFSKIDLRTGYHQLKVRESDIAK

Query:  TAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKG
        TAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKG
Subjt:  TAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKG

Query:  VSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRHFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL
        VSVDPQKVEAVVNWERPISATEVRSFLGLAGYYR FIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL
Subjt:  VSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRHFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL

Query:  GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKTLNLRQRRCLELIKDYDCTIEYHSGKANVVADA
        GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQK LNLRQRR LELIKDYDCTIEYH GKANVVADA
Subjt:  GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKTLNLRQRRCLELIKDYDCTIEYHSGKANVVADA

Query:  LSRKSRLPKSALCGIRVAMLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELK
        LSRKSRLPKSALCGIRVA+LNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELK
Subjt:  LSRKSRLPKSALCGIRVAMLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELK

Query:  NAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIVEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRL
        NAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEI EYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRL
Subjt:  NAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIVEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRL

Query:  TKTTRFLPIKMTSTLDQLARLYDDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGS
        TKTTRF+PIKMTSTLDQLARLY DKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGS
Subjt:  TKTTRFLPIKMTSTLDQLARLYDDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGS

TrEMBL top hits

e value

%identity

Alignment

A0A5A7T1Y5 Reverse transcriptase

0.0e+00

98.56

Show/hide

Query:  MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRRAALFSKIDLRTGYHQLKVRESDIAK
        MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLR AALFSKIDLR+GYHQLKVRESDIAK
Subjt:  MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRRAALFSKIDLRTGYHQLKVRESDIAK

Query:  TAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKG
        TAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKG
Subjt:  TAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKG

Query:  VSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRHFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL
        VSVDPQKVEAVVNWERPISATEVRSFLGLAGYYR FIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL
Subjt:  VSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRHFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL

Query:  GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKTLNLRQRRCLELIKDYDCTIEYHSGKANVVADA
        GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQK LNLRQRR LELIKDYDCTIEYH GKANVVADA
Subjt:  GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKTLNLRQRRCLELIKDYDCTIEYHSGKANVVADA

Query:  LSRKSRLPKSALCGIRVAMLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELK
        LSRKSRLPKSALCGIRVA+LNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELK
Subjt:  LSRKSRLPKSALCGIRVAMLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELK

Query:  NAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIVEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRL
        NAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEI EYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRL
Subjt:  NAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIVEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRL

Query:  TKTTRFLPIKMTSTLDQLARLYDDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGS
        TKTTRF+PIKMTSTLDQLARLY DKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGS
Subjt:  TKTTRFLPIKMTSTLDQLARLYDDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGS

A0A5A7TN04 Reverse transcriptase

0.0e+00

99.28

Show/hide

Query:  MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRRAALFSKIDLRTGYHQLKVRESDIAK
        MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRRAALFSKIDLRTGYHQLKVRESDIAK
Subjt:  MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRRAALFSKIDLRTGYHQLKVRESDIAK

Query:  TAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKG
        TAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKG
Subjt:  TAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKG

Query:  VSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRHFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL
        VSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRHFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL
Subjt:  VSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRHFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL

Query:  GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKTLNLRQRRCLELIKDYDCTIEYHSGKANVVADA
        GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGE+CHIFTDHKSLKYIFDQK LNLRQRRCLELIKDYDCTIEYHSGKANVVADA
Subjt:  GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKTLNLRQRRCLELIKDYDCTIEYHSGKANVVADA

Query:  LSRKSRLPKSALCGIRVAMLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELK
        LSRKSRLPKSALCGIRVAMLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKK EKSKKGLEVEFELRTDGAIVKQGRLCVPNISELK
Subjt:  LSRKSRLPKSALCGIRVAMLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELK

Query:  NAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIVEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRL
        NAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEI EYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRL
Subjt:  NAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIVEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRL

Query:  TKTTRFLPIKMTSTLDQLARLYDDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGS
        TKTTRFLPIKMTSTLDQLARLY DKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGS
Subjt:  TKTTRFLPIKMTSTLDQLARLYDDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGS

A0A5A7U2V7 Reverse transcriptase

0.0e+00

98.56

Show/hide

Query:  MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRRAALFSKIDLRTGYHQLKVRESDIAK
        MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLR AALFSKIDLR+GYHQLKVRESDIAK
Subjt:  MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRRAALFSKIDLRTGYHQLKVRESDIAK

Query:  TAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKG
        TAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKG
Subjt:  TAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKG

Query:  VSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRHFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL
        VSVDPQKVEAVVNWERPISATEVRSFLGLAGYYR FIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL
Subjt:  VSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRHFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL

Query:  GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKTLNLRQRRCLELIKDYDCTIEYHSGKANVVADA
        GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQK LNLRQRR LELIKDYDCTIEYH GKANVVADA
Subjt:  GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKTLNLRQRRCLELIKDYDCTIEYHSGKANVVADA

Query:  LSRKSRLPKSALCGIRVAMLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELK
        LSRKSRLPKSALCGIRVA+LNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELK
Subjt:  LSRKSRLPKSALCGIRVAMLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELK

Query:  NAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIVEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRL
        NAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEI EYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRL
Subjt:  NAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIVEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRL

Query:  TKTTRFLPIKMTSTLDQLARLYDDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGS
        TKTTRF+PIKMTSTLDQLARLY DKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGS
Subjt:  TKTTRFLPIKMTSTLDQLARLYDDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGS

A0A5A7UUL6 Reverse transcriptase

0.0e+00

98.56

Show/hide

Query:  MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRRAALFSKIDLRTGYHQLKVRESDIAK
        MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLR AALFSKIDLR+GYHQLKVRESDIAK
Subjt:  MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRRAALFSKIDLRTGYHQLKVRESDIAK

Query:  TAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKG
        TAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKG
Subjt:  TAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKG

Query:  VSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRHFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL
        VSVDPQKVEAVVNWERPISATEVRSFLGLAGYYR FIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL
Subjt:  VSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRHFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL

Query:  GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKTLNLRQRRCLELIKDYDCTIEYHSGKANVVADA
        GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQK LNLRQRR LELIKDYDCTIEYH GKANVVADA
Subjt:  GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKTLNLRQRRCLELIKDYDCTIEYHSGKANVVADA

Query:  LSRKSRLPKSALCGIRVAMLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELK
        LSRKSRLPKSALCGIRVA+LNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELK
Subjt:  LSRKSRLPKSALCGIRVAMLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELK

Query:  NAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIVEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRL
        NAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEI EYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRL
Subjt:  NAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIVEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRL

Query:  TKTTRFLPIKMTSTLDQLARLYDDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGS
        TKTTRF+PIKMTSTLDQLARLY DKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGS
Subjt:  TKTTRFLPIKMTSTLDQLARLYDDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGS

A0A5D3BHI1 Reverse transcriptase

0.0e+00

98.56

Show/hide

Query:  MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRRAALFSKIDLRTGYHQLKVRESDIAK
        MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLR AALFSKIDLR+GYHQLKVRESDIAK
Subjt:  MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRRAALFSKIDLRTGYHQLKVRESDIAK

Query:  TAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKG
        TAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKG
Subjt:  TAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKG

Query:  VSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRHFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL
        VSVDPQKVEAVVNWERPISATEVRSFLGLAGYYR FIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL
Subjt:  VSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRHFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL

Query:  GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKTLNLRQRRCLELIKDYDCTIEYHSGKANVVADA
        GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQK LNLRQRR LELIKDYDCTIEYH GKANVVADA
Subjt:  GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKTLNLRQRRCLELIKDYDCTIEYHSGKANVVADA

Query:  LSRKSRLPKSALCGIRVAMLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELK
        LSRKSRLPKSALCGIRVA+LNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELK
Subjt:  LSRKSRLPKSALCGIRVAMLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELK

Query:  NAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIVEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRL
        NAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEI EYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRL
Subjt:  NAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIVEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRL

Query:  TKTTRFLPIKMTSTLDQLARLYDDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGS
        TKTTRF+PIKMTSTLDQLARLY DKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGS
Subjt:  TKTTRFLPIKMTSTLDQLARLYDDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGS

SwissProt top hits

e value

%identity

Alignment

P0CT34 Transposon Tf2-1 polyprotein

8.9e-117

32.62

Show/hide

Query:  MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRRAALFSKIDLRTGYHQLKVRESDIAK
        + P +++ +  ++ + +  G IR S +    PV+FV KK+GTLR+ +DY+ LNK    N YPLP I+ L  +++ + +F+K+DL++ YH ++VR+ D  K
Subjt:  MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRRAALFSKIDLRTGYHQLKVRESDIAK

Query:  TAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKG
         AFR   G +E+ VMP+G++ APA F   +N I     +  V+ ++DDIL++S     H +H++ VLQ L+   L    +KCEF   QV F+G+ +S KG
Subjt:  TAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKG

Query:  VSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRHFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL
         +   + ++ V+ W++P +  E+R FLG   Y R FI   S+L  PL  L +K+V+++W+    Q+ + +K+ LV+ P+L      K  ++  DAS + +
Subjt:  VSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRHFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL

Query:  GCVLMQDGN-----VIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFG--EKCHIFTDHKSL--KYIFDQKTLNLRQRRCLELIKDYDCTIEYHS
        G VL Q  +      + Y S ++ + + NY   D E+ A++ +LK WRHYL    E   I TDH++L  +   + +  N R  R    ++D++  I Y  
Subjt:  GCVLMQDGN-----VIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFG--EKCHIFTDHKSL--KYIFDQKTLNLRQRRCLELIKDYDCTIEYHS

Query:  GKANVVADALSR----KSRLPKSALCGIRVAMLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVK
        G AN +ADALSR       +PK                     + ++S + + Q  +      ++V   + D+ L        K +E   +L+    I  
Subjt:  GKANVVADALSR----KSRLPKSALCGIRVAMLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVK

Query:  QGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIVEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTS
        + ++ +PN ++L   I+++ H     +HPG   +   + + + W G++++I EYV  C  CQ  K    +P G L P+P  E  WE ++MDF+  LP  S
Subjt:  QGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIVEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTS

Query:  SGHDGIWVIVDRLTKTTRFLPIKMTSTLDQLARLYDDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRA
        SG++ ++V+VDR +K    +P   + T +Q AR++D ++++ +G P  I++D D  FTS+ W          +KFS  + PQTDGQ+ERT QT+E +LR 
Subjt:  SGHDGIWVIVDRLTKTTRFLPIKMTSTLDQLARLYDDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRA

Query:  CV
        CV
Subjt:  CV

P0CT35 Transposon Tf2-2 polyprotein

8.9e-117

32.62

Show/hide

Query:  MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRRAALFSKIDLRTGYHQLKVRESDIAK
        + P +++ +  ++ + +  G IR S +    PV+FV KK+GTLR+ +DY+ LNK    N YPLP I+ L  +++ + +F+K+DL++ YH ++VR+ D  K
Subjt:  MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRRAALFSKIDLRTGYHQLKVRESDIAK

Query:  TAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKG
         AFR   G +E+ VMP+G++ APA F   +N I     +  V+ ++DDIL++S     H +H++ VLQ L+   L    +KCEF   QV F+G+ +S KG
Subjt:  TAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKG

Query:  VSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRHFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL
         +   + ++ V+ W++P +  E+R FLG   Y R FI   S+L  PL  L +K+V+++W+    Q+ + +K+ LV+ P+L      K  ++  DAS + +
Subjt:  VSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRHFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL

Query:  GCVLMQDGN-----VIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFG--EKCHIFTDHKSL--KYIFDQKTLNLRQRRCLELIKDYDCTIEYHS
        G VL Q  +      + Y S ++ + + NY   D E+ A++ +LK WRHYL    E   I TDH++L  +   + +  N R  R    ++D++  I Y  
Subjt:  GCVLMQDGN-----VIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFG--EKCHIFTDHKSL--KYIFDQKTLNLRQRRCLELIKDYDCTIEYHS

Query:  GKANVVADALSR----KSRLPKSALCGIRVAMLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVK
        G AN +ADALSR       +PK                     + ++S + + Q  +      ++V   + D+ L        K +E   +L+    I  
Subjt:  GKANVVADALSR----KSRLPKSALCGIRVAMLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVK

Query:  QGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIVEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTS
        + ++ +PN ++L   I+++ H     +HPG   +   + + + W G++++I EYV  C  CQ  K    +P G L P+P  E  WE ++MDF+  LP  S
Subjt:  QGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIVEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTS

Query:  SGHDGIWVIVDRLTKTTRFLPIKMTSTLDQLARLYDDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRA
        SG++ ++V+VDR +K    +P   + T +Q AR++D ++++ +G P  I++D D  FTS+ W          +KFS  + PQTDGQ+ERT QT+E +LR 
Subjt:  SGHDGIWVIVDRLTKTTRFLPIKMTSTLDQLARLYDDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRA

Query:  CV
        CV
Subjt:  CV

P0CT36 Transposon Tf2-3 polyprotein

8.9e-117

32.62

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Query:  MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRRAALFSKIDLRTGYHQLKVRESDIAK
        + P +++ +  ++ + +  G IR S +    PV+FV KK+GTLR+ +DY+ LNK    N YPLP I+ L  +++ + +F+K+DL++ YH ++VR+ D  K
Subjt:  MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRRAALFSKIDLRTGYHQLKVRESDIAK

Query:  TAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKG
         AFR   G +E+ VMP+G++ APA F   +N I     +  V+ ++DDIL++S     H +H++ VLQ L+   L    +KCEF   QV F+G+ +S KG
Subjt:  TAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKG

Query:  VSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRHFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL
         +   + ++ V+ W++P +  E+R FLG   Y R FI   S+L  PL  L +K+V+++W+    Q+ + +K+ LV+ P+L      K  ++  DAS + +
Subjt:  VSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRHFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL

Query:  GCVLMQDGN-----VIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFG--EKCHIFTDHKSL--KYIFDQKTLNLRQRRCLELIKDYDCTIEYHS
        G VL Q  +      + Y S ++ + + NY   D E+ A++ +LK WRHYL    E   I TDH++L  +   + +  N R  R    ++D++  I Y  
Subjt:  GCVLMQDGN-----VIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFG--EKCHIFTDHKSL--KYIFDQKTLNLRQRRCLELIKDYDCTIEYHS

Query:  GKANVVADALSR----KSRLPKSALCGIRVAMLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVK
        G AN +ADALSR       +PK                     + ++S + + Q  +      ++V   + D+ L        K +E   +L+    I  
Subjt:  GKANVVADALSR----KSRLPKSALCGIRVAMLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVK

Query:  QGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIVEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTS
        + ++ +PN ++L   I+++ H     +HPG   +   + + + W G++++I EYV  C  CQ  K    +P G L P+P  E  WE ++MDF+  LP  S
Subjt:  QGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIVEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTS

Query:  SGHDGIWVIVDRLTKTTRFLPIKMTSTLDQLARLYDDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRA
        SG++ ++V+VDR +K    +P   + T +Q AR++D ++++ +G P  I++D D  FTS+ W          +KFS  + PQTDGQ+ERT QT+E +LR 
Subjt:  SGHDGIWVIVDRLTKTTRFLPIKMTSTLDQLARLYDDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRA

Query:  CV
        CV
Subjt:  CV

P0CT37 Transposon Tf2-4 polyprotein

8.9e-117

32.62

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Query:  MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRRAALFSKIDLRTGYHQLKVRESDIAK
        + P +++ +  ++ + +  G IR S +    PV+FV KK+GTLR+ +DY+ LNK    N YPLP I+ L  +++ + +F+K+DL++ YH ++VR+ D  K
Subjt:  MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRRAALFSKIDLRTGYHQLKVRESDIAK

Query:  TAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKG
         AFR   G +E+ VMP+G++ APA F   +N I     +  V+ ++DDIL++S     H +H++ VLQ L+   L    +KCEF   QV F+G+ +S KG
Subjt:  TAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKG

Query:  VSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRHFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL
         +   + ++ V+ W++P +  E+R FLG   Y R FI   S+L  PL  L +K+V+++W+    Q+ + +K+ LV+ P+L      K  ++  DAS + +
Subjt:  VSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRHFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL

Query:  GCVLMQDGN-----VIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFG--EKCHIFTDHKSL--KYIFDQKTLNLRQRRCLELIKDYDCTIEYHS
        G VL Q  +      + Y S ++ + + NY   D E+ A++ +LK WRHYL    E   I TDH++L  +   + +  N R  R    ++D++  I Y  
Subjt:  GCVLMQDGN-----VIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFG--EKCHIFTDHKSL--KYIFDQKTLNLRQRRCLELIKDYDCTIEYHS

Query:  GKANVVADALSR----KSRLPKSALCGIRVAMLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVK
        G AN +ADALSR       +PK                     + ++S + + Q  +      ++V   + D+ L        K +E   +L+    I  
Subjt:  GKANVVADALSR----KSRLPKSALCGIRVAMLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVK

Query:  QGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIVEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTS
        + ++ +PN ++L   I+++ H     +HPG   +   + + + W G++++I EYV  C  CQ  K    +P G L P+P  E  WE ++MDF+  LP  S
Subjt:  QGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIVEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTS

Query:  SGHDGIWVIVDRLTKTTRFLPIKMTSTLDQLARLYDDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRA
        SG++ ++V+VDR +K    +P   + T +Q AR++D ++++ +G P  I++D D  FTS+ W          +KFS  + PQTDGQ+ERT QT+E +LR 
Subjt:  SGHDGIWVIVDRLTKTTRFLPIKMTSTLDQLARLYDDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRA

Query:  CV
        CV
Subjt:  CV

P0CT41 Transposon Tf2-12 polyprotein

8.9e-117

32.62

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Query:  MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRRAALFSKIDLRTGYHQLKVRESDIAK
        + P +++ +  ++ + +  G IR S +    PV+FV KK+GTLR+ +DY+ LNK    N YPLP I+ L  +++ + +F+K+DL++ YH ++VR+ D  K
Subjt:  MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRRAALFSKIDLRTGYHQLKVRESDIAK

Query:  TAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKG
         AFR   G +E+ VMP+G++ APA F   +N I     +  V+ ++DDIL++S     H +H++ VLQ L+   L    +KCEF   QV F+G+ +S KG
Subjt:  TAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKG

Query:  VSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRHFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL
         +   + ++ V+ W++P +  E+R FLG   Y R FI   S+L  PL  L +K+V+++W+    Q+ + +K+ LV+ P+L      K  ++  DAS + +
Subjt:  VSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRHFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL

Query:  GCVLMQDGN-----VIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFG--EKCHIFTDHKSL--KYIFDQKTLNLRQRRCLELIKDYDCTIEYHS
        G VL Q  +      + Y S ++ + + NY   D E+ A++ +LK WRHYL    E   I TDH++L  +   + +  N R  R    ++D++  I Y  
Subjt:  GCVLMQDGN-----VIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFG--EKCHIFTDHKSL--KYIFDQKTLNLRQRRCLELIKDYDCTIEYHS

Query:  GKANVVADALSR----KSRLPKSALCGIRVAMLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVK
        G AN +ADALSR       +PK                     + ++S + + Q  +      ++V   + D+ L        K +E   +L+    I  
Subjt:  GKANVVADALSR----KSRLPKSALCGIRVAMLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVK

Query:  QGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIVEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTS
        + ++ +PN ++L   I+++ H     +HPG   +   + + + W G++++I EYV  C  CQ  K    +P G L P+P  E  WE ++MDF+  LP  S
Subjt:  QGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIVEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTS

Query:  SGHDGIWVIVDRLTKTTRFLPIKMTSTLDQLARLYDDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRA
        SG++ ++V+VDR +K    +P   + T +Q AR++D ++++ +G P  I++D D  FTS+ W          +KFS  + PQTDGQ+ERT QT+E +LR 
Subjt:  SGHDGIWVIVDRLTKTTRFLPIKMTSTLDQLARLYDDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRA

Query:  CV
        CV
Subjt:  CV

Arabidopsis top hits

e value

%identity

Alignment

ATMG00860.1 DNA/RNA polymerases superfamily protein

3.3e-26

44.35

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Query:  HLRIVLQTLREKQLYAKFSKCEFWLEQVVFLG--HVVSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRHFIEDFSRLALPLTALTRKNVKFEW
        HL +VLQ   + Q YA   KC F   Q+ +LG  H++S +GVS DP K+EA+V W  P + TE+R FLGL GYYR F++++ ++  PLT L +KN   +W
Subjt:  HLRIVLQTLREKQLYAKFSKCEFWLEQVVFLG--HVVSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRHFIEDFSRLALPLTALTRKNVKFEW

Query:  SDKCEQSFQELKKRLVTAPILALP
        ++    +F+ LK  + T P+LALP
Subjt:  SDKCEQSFQELKKRLVTAPILALP

Sequences

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CDS sequence

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ATGGCTCCAAGCGAGCTAAAAGAATTGAAGATGCAGTTACAAGAACTAGTTGACAAGGGATACATCAGGCCTAGTGTTTCGCCGTGGGGAGCACCAGTGCTTTTT
GTGAAAAAGAAAGATGGTACCCTCAGATTATGTATTGACTATAGACAGTTAAACAAGGTTACAATACGTAACAAGTATCCTTTACCACGCATCGATGACTTATTT
GATCAACTAAGGAGAGCAGCGTTGTTCTCTAAGATTGACTTAAGGACAGGATACCACCAGTTGAAGGTTAGAGAATCAGATATTGCTAAAACAGCATTTAGAACG
AGGTATGGGCATTATGAGTTTCGAGTTATGCCATTCGGTTTAACGAATGCGCCAGCGGTTTTCATGGATCTCATGAACAGGATCTTCCATCGGTATTTAGATCAG
TTTGTGATTGTGTTCATTGATGATATATTAGTTTACTCAGTTGACAGAGAATCTCATGAGGAACATCTGAGGATTGTTCTACAGACTCTACGTGAAAAACAGTTA
TACGCTAAGTTCAGCAAATGTGAGTTCTGGTTGGAACAAGTAGTATTTTTGGGGCATGTAGTTTCAGCAAAAGGAGTTAGTGTCGATCCACAAAAAGTAGAAGCG
GTTGTCAATTGGGAAAGACCAATTAGTGCGACAGAAGTACGTAGTTTCCTGGGTTTGGCAGGATACTATAGGCATTTTATTGAGGATTTCTCTCGATTGGCATTG
CCTTTGACCGCTTTGACAAGGAAGAATGTTAAGTTTGAGTGGTCAGATAAATGCGAGCAAAGTTTTCAGGAATTGAAGAAAAGACTAGTTACAGCACCTATTTTG
GCACTTCCTGTAACAGGGAAGGACTATGTAATTTATTGTGATGCTTCAAGGCTAGGATTAGGTTGTGTGCTTATGCAAGATGGGAATGTAATAGCTTATGCTTCA
AGGCAGTTGAAGGAGCATGAGTGTAATTACCCTACCCATGATCTTGAGCTAGCAGCAGTTGTTTTAGCACTAAAAATCTGGAGACACTATTTGTTCGGGGAAAAG
TGCCATATTTTCACAGATCATAAAAGTCTGAAGTATATTTTTGATCAAAAAACGCTAAATCTGAGACAAAGGCGATGTCTAGAACTGATTAAAGATTATGATTGT
ACTATAGAGTATCATTCAGGTAAGGCCAACGTTGTAGCAGATGCATTAAGTAGGAAGTCAAGACTTCCGAAGAGTGCCTTGTGTGGTATTCGAGTAGCTATGTTG
AATGAGTTAAGAGGTTCCAAGGCAGTAGTAACTACAGAGGATTCAGGAAGTCTCTTAGCTCAATTTCAGGTTCGGTCTTCTCTAGTAACTGAGATTGTAAGAAGA
CAGTCAGAAGACAGTAATTTACAGAAGAAGTTTGAGAAATCCAAGAAAGGCTTAGAGGTGGAGTTTGAGCTGAGAACAGATGGAGCCATTGTTAAACAAGGAAGA
TTATGTGTTCCGAATATCAGTGAGCTTAAGAATGCTATTCTAGAAGAAGCTCACAGTTCAGCTTACGCTATGCATCCAGGTAGCACCAAGATGTACCGAACTTTA
AAGAAGACTTATTGGTGGTCTGGAATGAAGCAAGAGATAGTTGAATATGTTGATAGATGTTTGATTTGTCAACAGGTTAAACCAGTAAGACAGAGGCCAGGAGGA
TTTCTTAATCCTTTGCCAGTGCCAGAGTGGAAATGGGAGCATATTACTATGGATTTTCTATTTGGATTACCTCGTACATCCAGTGGACATGATGGTATATGGGTA
ATAGTAGACAGACTCACCAAGACGACACGATTTTTACCGATTAAAATGACATCTACGTTAGACCAGCTAGCGAGATTATATGATGATAAGATTGTGAGTCAGTAT
GGAGTACCAGTGTCCATAGTTTCAGATAGGGATCCGAGGTTTACTTCTAAATTTTGGCCTAGTTTACAGAAAGCAATGGGAACAGGGCTAAAGTTTAGTACATCA
TTTCATCCCCAAACAGATGGTCAGTCCGAGAGGACCATCCAAACTTTAGAGGACATGTTGAGAGCATGTGTCCTACAACTTAAAGGAAGTTAG

mRNA sequence

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Protein sequence

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MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRRAALFSKIDLRTGYHQLKVRESDIAKTAFRT
RYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEA
VVNWERPISATEVRSFLGLAGYYRHFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGNVIAYAS
RQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKTLNLRQRRCLELIKDYDCTIEYHSGKANVVADALSRKSRLPKSALCGIRVAML
NELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTL
KKTYWWSGMKQEIVEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTTRFLPIKMTSTLDQLARLYDDKIVSQY
GVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGS

Cmc08g0228381 (gene) of Melon (Charmono) v1.1 genome