CuGenDBv2

Gene ID	Cmc08g0228421
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Protein FAR1-RELATED SEQUENCE 4
Genome location	CMiso1.1chr08:22656059..22656637
RNA-Seq Expression	Cmc08g0228421
Synteny	Cmc08g0228421
Gene Ontology terms	GO:0015074 - DNA integration (biological process) GO:0003676 - nucleic acid binding (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR018289 - MULE transposase domain

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0035384.1 protein FAR-RED IMPAIRED RESPONSE 1-like [Cucumis melo var. makuwa]

7.1e-60

80.95

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Query:  MSTDRSIPKEIVHKTRTNLGVNISYQKPWRAKEHMVKILHGDTVESYALIQRFFDKL-------------DDSGHFKFYFMAFDASIEGWKYCRPIISID
        MSTDRSIPKEIVHK  TNLGVNISYQK WR KEHMVKILH D VESYALI RFFDKL             DDSGHFKF FMAF ASIEGWKYCR IIS+D
Subjt:  MSTDRSIPKEIVHKTRTNLGVNISYQKPWRAKEHMVKILHGDTVESYALIQRFFDKL-------------DDSGHFKFYFMAFDASIEGWKYCRPIISID

Query:  GTFLKCKFGGILLIASSQDGNNQIFPLAFAIVDSENDVSWTWFFEKI
        GTFLKCKFGGILL ASSQDGNNQIFPLAF IVD END SWTWFFEKI
Subjt:  GTFLKCKFGGILLIASSQDGNNQIFPLAFAIVDSENDVSWTWFFEKI

KAA0036500.1 protein FAR1-RELATED SEQUENCE 4 [Cucumis melo var. makuwa]

4.9e-61

83.67

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Query:  MSTDRSIPKEIVHKTRTNLGVNISYQKPWRAKEHMVKILHGDTVESYALIQRFFDKL-------------DDSGHFKFYFMAFDASIEGWKYCRPIISID
        MSTD SIPKEI HKTRTNLGVNISYQK WR KEHMVKILHGDTVESYALI RFFDKL             DDSGHFKF FMAF ASIE WKYC PIISID
Subjt:  MSTDRSIPKEIVHKTRTNLGVNISYQKPWRAKEHMVKILHGDTVESYALIQRFFDKL-------------DDSGHFKFYFMAFDASIEGWKYCRPIISID

Query:  GTFLKCKFGGILLIASSQDGNNQIFPLAFAIVDSENDVSWTWFFEKI
        GTFLKCKFG ILL ASSQDGNNQIFPLAFAIVDSENDVSWTWFFEKI
Subjt:  GTFLKCKFGGILLIASSQDGNNQIFPLAFAIVDSENDVSWTWFFEKI

KAA0047748.1 uncharacterized protein E6C27_scaffold1059G00070 [Cucumis melo var. makuwa]

1.2e-59

80.95

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Query:  MSTDRSIPKEIVHKTRTNLGVNISYQKPWRAKEHMVKILHGDTVESYALIQRFFDKL-------------DDSGHFKFYFMAFDASIEGWKYCRPIISID
        MSTDRSIPKEIVHK  TNLGVN SYQK WRAKEHMVKILHGDTVE YALI RFFDKL             DD+GHFKF FM F ASIEGWKYCRPIIS+D
Subjt:  MSTDRSIPKEIVHKTRTNLGVNISYQKPWRAKEHMVKILHGDTVESYALIQRFFDKL-------------DDSGHFKFYFMAFDASIEGWKYCRPIISID

Query:  GTFLKCKFGGILLIASSQDGNNQIFPLAFAIVDSENDVSWTWFFEKI
         TFLKCKFGGI L ASSQDGNNQIFPLAFAIVDSEND SWTWFFEKI
Subjt:  GTFLKCKFGGILLIASSQDGNNQIFPLAFAIVDSENDVSWTWFFEKI

KAA0050206.1 uncharacterized protein E6C27_scaffold355G00380 [Cucumis melo var. makuwa]

1.7e-58

79.59

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Query:  MSTDRSIPKEIVHKTRTNLGVNISYQKPWRAKEHMVKILHGDTVESYALIQRFFDKL-------------DDSGHFKFYFMAFDASIEGWKYCRPIISID
        MSTDRSIPKEIVHK RT LGV ISYQK WR KEH+VKILHGDTVESYALI RFFDKL             DDSGHFKF FMAF AS+EGWKYCR IISID
Subjt:  MSTDRSIPKEIVHKTRTNLGVNISYQKPWRAKEHMVKILHGDTVESYALIQRFFDKL-------------DDSGHFKFYFMAFDASIEGWKYCRPIISID

Query:  GTFLKCKFGGILLIASSQDGNNQIFPLAFAIVDSENDVSWTWFFEKI
        G FLKCKFGGILL ASSQDGN+QIFPLAFAIVDSE D  WTWFFEKI
Subjt:  GTFLKCKFGGILLIASSQDGNNQIFPLAFAIVDSENDVSWTWFFEKI

TYK02872.1 protein FAR1-RELATED SEQUENCE 4 [Cucumis melo var. makuwa]

9.6e-57

80.14

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Query:  MSTDRSIPKEIVHKTRTNLGVNISYQKPWRAKEHMVKILHGDTVESYALIQRFFDKL-------------DDSGHFKFYFMAFDASIEGWKYCRPIISID
        MST+RSIP EIVHK RTNLG+NISYQK WRAKEHMVKILHGDTVESYALI RFFDKL             DDSGHFKF FMAF ASIEGWKYC+PII +D
Subjt:  MSTDRSIPKEIVHKTRTNLGVNISYQKPWRAKEHMVKILHGDTVESYALIQRFFDKL-------------DDSGHFKFYFMAFDASIEGWKYCRPIISID

Query:  GTFLKCKFGGILLIASSQDGNNQIFPLAFAIVDSENDVSWT
        G FLKCKFGGILL ASSQDGNNQIFPLAF IVDS+NDVSWT
Subjt:  GTFLKCKFGGILLIASSQDGNNQIFPLAFAIVDSENDVSWT

TrEMBL top hits

e value

%identity

Alignment

A0A5D3BGP1 MULE domain-containing protein

8.4e-59

79.59

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Query:  MSTDRSIPKEIVHKTRTNLGVNISYQKPWRAKEHMVKILHGDTVESYALIQRFFDKL-------------DDSGHFKFYFMAFDASIEGWKYCRPIISID
        MSTDRSIPKEIVHK RT LGV ISYQK WR KEH+VKILHGDTVESYALI RFFDKL             DDSGHFKF FMAF AS+EGWKYCR IISID
Subjt:  MSTDRSIPKEIVHKTRTNLGVNISYQKPWRAKEHMVKILHGDTVESYALIQRFFDKL-------------DDSGHFKFYFMAFDASIEGWKYCRPIISID

Query:  GTFLKCKFGGILLIASSQDGNNQIFPLAFAIVDSENDVSWTWFFEKI
        G FLKCKFGGILL ASSQDGN+QIFPLAFAIVDSE D  WTWFFEKI
Subjt:  GTFLKCKFGGILLIASSQDGNNQIFPLAFAIVDSENDVSWTWFFEKI

A0A5D3BMN4 Protein FAR1-RELATED SEQUENCE 4

2.4e-61

83.67

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Query:  MSTDRSIPKEIVHKTRTNLGVNISYQKPWRAKEHMVKILHGDTVESYALIQRFFDKL-------------DDSGHFKFYFMAFDASIEGWKYCRPIISID
        MSTD SIPKEI HKTRTNLGVNISYQK WR KEHMVKILHGDTVESYALI RFFDKL             DDSGHFKF FMAF ASIE WKYC PIISID
Subjt:  MSTDRSIPKEIVHKTRTNLGVNISYQKPWRAKEHMVKILHGDTVESYALIQRFFDKL-------------DDSGHFKFYFMAFDASIEGWKYCRPIISID

Query:  GTFLKCKFGGILLIASSQDGNNQIFPLAFAIVDSENDVSWTWFFEKI
        GTFLKCKFG ILL ASSQDGNNQIFPLAFAIVDSENDVSWTWFFEKI
Subjt:  GTFLKCKFGGILLIASSQDGNNQIFPLAFAIVDSENDVSWTWFFEKI

A0A5D3BUA2 MULE domain-containing protein

5.8e-60

80.95

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Query:  MSTDRSIPKEIVHKTRTNLGVNISYQKPWRAKEHMVKILHGDTVESYALIQRFFDKL-------------DDSGHFKFYFMAFDASIEGWKYCRPIISID
        MSTDRSIPKEIVHK  TNLGVN SYQK WRAKEHMVKILHGDTVE YALI RFFDKL             DD+GHFKF FM F ASIEGWKYCRPIIS+D
Subjt:  MSTDRSIPKEIVHKTRTNLGVNISYQKPWRAKEHMVKILHGDTVESYALIQRFFDKL-------------DDSGHFKFYFMAFDASIEGWKYCRPIISID

Query:  GTFLKCKFGGILLIASSQDGNNQIFPLAFAIVDSENDVSWTWFFEKI
         TFLKCKFGGI L ASSQDGNNQIFPLAFAIVDSEND SWTWFFEKI
Subjt:  GTFLKCKFGGILLIASSQDGNNQIFPLAFAIVDSENDVSWTWFFEKI

A0A5D3BVN2 Protein FAR1-RELATED SEQUENCE 4

4.6e-57

80.14

Show/hide

Query:  MSTDRSIPKEIVHKTRTNLGVNISYQKPWRAKEHMVKILHGDTVESYALIQRFFDKL-------------DDSGHFKFYFMAFDASIEGWKYCRPIISID
        MST+RSIP EIVHK RTNLG+NISYQK WRAKEHMVKILHGDTVESYALI RFFDKL             DDSGHFKF FMAF ASIEGWKYC+PII +D
Subjt:  MSTDRSIPKEIVHKTRTNLGVNISYQKPWRAKEHMVKILHGDTVESYALIQRFFDKL-------------DDSGHFKFYFMAFDASIEGWKYCRPIISID

Query:  GTFLKCKFGGILLIASSQDGNNQIFPLAFAIVDSENDVSWT
        G FLKCKFGGILL ASSQDGNNQIFPLAF IVDS+NDVSWT
Subjt:  GTFLKCKFGGILLIASSQDGNNQIFPLAFAIVDSENDVSWT

A0A5D3BZ76 Protein FAR-RED IMPAIRED RESPONSE 1-like

3.4e-60

80.95

Show/hide

Query:  MSTDRSIPKEIVHKTRTNLGVNISYQKPWRAKEHMVKILHGDTVESYALIQRFFDKL-------------DDSGHFKFYFMAFDASIEGWKYCRPIISID
        MSTDRSIPKEIVHK  TNLGVNISYQK WR KEHMVKILH D VESYALI RFFDKL             DDSGHFKF FMAF ASIEGWKYCR IIS+D
Subjt:  MSTDRSIPKEIVHKTRTNLGVNISYQKPWRAKEHMVKILHGDTVESYALIQRFFDKL-------------DDSGHFKFYFMAFDASIEGWKYCRPIISID

Query:  GTFLKCKFGGILLIASSQDGNNQIFPLAFAIVDSENDVSWTWFFEKI
        GTFLKCKFGGILL ASSQDGNNQIFPLAF IVD END SWTWFFEKI
Subjt:  GTFLKCKFGGILLIASSQDGNNQIFPLAFAIVDSENDVSWTWFFEKI

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G49920.1 MuDR family transposase

1.3e-11

33.63

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Query:  YQKPWRAKEHMVKILHGDTVESYALIQRFFDKL---DDSGHFKFYFMAFDASIEGWKYCRPIISIDGTFLKCKFGGILLIASSQDGNNQIFPLAFAIVDS
        + + +R    ++ +LH     +  L+   +D L    +   F+  F AF  SI+G+++CRP+I +D   L  K+   L+IAS+ D  NQ FPLAFA+   
Subjt:  YQKPWRAKEHMVKILHGDTVESYALIQRFFDKL---DDSGHFKFYFMAFDASIEGWKYCRPIISIDGTFLKCKFGGILLIASSQDGNNQIFPLAFAIVDS

Query:  ENDVSWTWFFEKI
         +  SW WF  +I
Subjt:  ENDVSWTWFFEKI

AT1G64255.1 MuDR family transposase

1.1e-10

44.12

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Query:  FMAFDASIEGWKYCRPIISIDGTFLKCKFGGILLIASSQDGNNQIFPLAFAIVDSENDVSWTWFFEKI
        F AF  SIEG+++CRP+I +D   L C++   L+IAS  D  N+ FPLAFA+    +   W WF   I
Subjt:  FMAFDASIEGWKYCRPIISIDGTFLKCKFGGILLIASSQDGNNQIFPLAFAIVDSENDVSWTWFFEKI

AT1G64260.1 MuDR family transposase

1.2e-12

44.74

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Query:  DSGHFKFYFMAFDASIEGWKYCRPIISIDGTFLKCKFGGILLIASSQDGNNQIFPLAFAIVDSENDVSWTWFFEKI
        D   F+  F +F  SIEG+++CRP+I +D   L  K+   L+IAS  D  N+ FPLAFA+    +  SW WFF KI
Subjt:  DSGHFKFYFMAFDASIEGWKYCRPIISIDGTFLKCKFGGILLIASSQDGNNQIFPLAFAIVDSENDVSWTWFFEKI

Sequences

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CDS sequence

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ATGTCTACTGATCGTTCCATTCCTAAAGAGATTGTGCATAAGACTCGTACAAATCTTGGAGTTAATATAAGTTACCAAAAACCTTGGAGGGCAAAAGAACATATGGTAAA
GATATTACATGGTGACACAGTTGAATCGTATGCCTTGATTCAAAGATTCTTTGATAAATTGGATGATAGTGGTCATTTCAAGTTTTACTTTATGGCTTTTGATGCATCAA
TTGAGGGGTGGAAATATTGTAGACCTATTATTTCTATTGATGGGACATTTTTGAAGTGTAAGTTTGGTGGCATCCTATTAATAGCCTCATCACAAGATGGTAACAATCAA
ATCTTCCCTCTTGCTTTTGCCATTGTAGATTCTGAAAATGATGTATCATGGACATGGTTTTTTGAGAAGATATGA

mRNA sequence

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Protein sequence

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MSTDRSIPKEIVHKTRTNLGVNISYQKPWRAKEHMVKILHGDTVESYALIQRFFDKLDDSGHFKFYFMAFDASIEGWKYCRPIISIDGTFLKCKFGGILLIASSQDGNNQ
IFPLAFAIVDSENDVSWTWFFEKI

Cmc08g0228421 (gene) of Melon (Charmono) v1.1 genome