| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0034929.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 4.2e-194 | 100 | Show/hide |
Query: MCGSKSMFVEFDEFVGGDIVFGDATKIPVKGKGKMLINLKNGKHEFIANVYNVPNMKNNILSLGQLLEKGYSILMKDYSLLIRDNHDKIIAKVQMAKNRM
MCGSKSMFVEFDEFVGGDIVFGDATKIPVKGKGKMLINLKNGKHEFIANVYNVPNMKNNILSLGQLLEKGYSILMKDYSLLIRDNHDKIIAKVQMAKNRM
Subjt: MCGSKSMFVEFDEFVGGDIVFGDATKIPVKGKGKMLINLKNGKHEFIANVYNVPNMKNNILSLGQLLEKGYSILMKDYSLLIRDNHDKIIAKVQMAKNRM
Query: FLLNIQTNVAKCLKLCLKDPNWIWHLRFGHLNFDSLRLLARKDMVKGLPYVKHPDQLCEGYLHGKQSRKSFPQESSSRAKRPVELVHTDLCGLIKPSSFG
FLLNIQTNVAKCLKLCLKDPNWIWHLRFGHLNFDSLRLLARKDMVKGLPYVKHPDQLCEGYLHGKQSRKSFPQESSSRAKRPVELVHTDLCGLIKPSSFG
Subjt: FLLNIQTNVAKCLKLCLKDPNWIWHLRFGHLNFDSLRLLARKDMVKGLPYVKHPDQLCEGYLHGKQSRKSFPQESSSRAKRPVELVHTDLCGLIKPSSFG
Query: KNNYFLLFIDAFTRKTWVYFVKEKSEVFDMFKRFKALVEKESGYYIALRSDRGGEFTSNEFKTFYTENKIRRSMTVPFTPQQNGVVERKNRTIINMAQNM
KNNYFLLFIDAFTRKTWVYFVKEKSEVFDMFKRFKALVEKESGYYIALRSDRGGEFTSNEFKTFYTENKIRRSMTVPFTPQQNGVVERKNRTIINMAQNM
Subjt: KNNYFLLFIDAFTRKTWVYFVKEKSEVFDMFKRFKALVEKESGYYIALRSDRGGEFTSNEFKTFYTENKIRRSMTVPFTPQQNGVVERKNRTIINMAQNM
Query: LKCKKMPKEFWAQVVECAVYLSNRSPTRSLWNKSP
LKCKKMPKEFWAQVVECAVYLSNRSPTRSLWNKSP
Subjt: LKCKKMPKEFWAQVVECAVYLSNRSPTRSLWNKSP
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| KAA0047979.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 3.7e-174 | 90.48 | Show/hide |
Query: MCGSKSMFVEFDEFVGGDIVFGDATKIPVKGKGKMLINLKNGKHEFIANVYNVPNMKNNILSLGQLLEKGYSILMKDYSLLIRDNHDKIIAKVQMAKNRM
MCGSKSMF+E DE VGGDIVFGDATKIPVKGKGK+LINLKNGKHEFI+NVY VPNMKNNILSLGQLLEKGY+ILMKDYSLLIRDNHDKIIAKVQM KNRM
Subjt: MCGSKSMFVEFDEFVGGDIVFGDATKIPVKGKGKMLINLKNGKHEFIANVYNVPNMKNNILSLGQLLEKGYSILMKDYSLLIRDNHDKIIAKVQMAKNRM
Query: FLLNIQTNVAKCLKLCLKDPNWIWHLRFGHLNFDSLRLLARKDMVKGLPYVKHPDQLCEGYLHGKQSRKSFPQESSSRAKRPVELVHTDLCGLIKPSSFG
FLLNIQT+VA+CLK CLKDPNWIWHLRFGHLNFD LRLLARK+MVKGLPYVK PDQLCEG LHGKQSRKSFPQESS RA+RP+ELVHTDLCG IKPSSFG
Subjt: FLLNIQTNVAKCLKLCLKDPNWIWHLRFGHLNFDSLRLLARKDMVKGLPYVKHPDQLCEGYLHGKQSRKSFPQESSSRAKRPVELVHTDLCGLIKPSSFG
Query: KNNYFLLFIDAFTRKTWVYFVKEKSEVFDMFKRFKALVEKESGYYI-ALRSDRGGEFTSNEFKTFYTENKIRRSMTVPFTPQQNGVVERKNRTIINMAQN
KNNYFLLFID F+RKTWVYFVKEKSEVF MFKRFKALVEKESGYYI ALRSDRGGEFTSNEFKTF EN IRR+MTVPFTPQQNGVVERKNRTI+NMA++
Subjt: KNNYFLLFIDAFTRKTWVYFVKEKSEVFDMFKRFKALVEKESGYYI-ALRSDRGGEFTSNEFKTFYTENKIRRSMTVPFTPQQNGVVERKNRTIINMAQN
Query: MLKCKKMPKEFWAQVVECAVYLSNRSPTRSLWNKSP
MLKCKKMPKEFWAQ VECAVYLSNRSPTRSLWNK+P
Subjt: MLKCKKMPKEFWAQVVECAVYLSNRSPTRSLWNKSP
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| TYJ96309.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 3.7e-174 | 90.48 | Show/hide |
Query: MCGSKSMFVEFDEFVGGDIVFGDATKIPVKGKGKMLINLKNGKHEFIANVYNVPNMKNNILSLGQLLEKGYSILMKDYSLLIRDNHDKIIAKVQMAKNRM
MCGSKSMF+E DE VGGDIVFGDATKIPVKGKGK+LINLKNGKHEFI+NVY VPNMKNNILSLGQLLEKGY+ILMKDYSLLIRDNHDKIIAKVQM KNRM
Subjt: MCGSKSMFVEFDEFVGGDIVFGDATKIPVKGKGKMLINLKNGKHEFIANVYNVPNMKNNILSLGQLLEKGYSILMKDYSLLIRDNHDKIIAKVQMAKNRM
Query: FLLNIQTNVAKCLKLCLKDPNWIWHLRFGHLNFDSLRLLARKDMVKGLPYVKHPDQLCEGYLHGKQSRKSFPQESSSRAKRPVELVHTDLCGLIKPSSFG
FLLNIQT+VA+CLK CLKDPNWIWHLRFGHLNFD LRLLARK+MVKGLPYVK PDQLCEG LHGKQSRKSFPQESS RA+RP+ELVHTDLCG IKPSSFG
Subjt: FLLNIQTNVAKCLKLCLKDPNWIWHLRFGHLNFDSLRLLARKDMVKGLPYVKHPDQLCEGYLHGKQSRKSFPQESSSRAKRPVELVHTDLCGLIKPSSFG
Query: KNNYFLLFIDAFTRKTWVYFVKEKSEVFDMFKRFKALVEKESGYYI-ALRSDRGGEFTSNEFKTFYTENKIRRSMTVPFTPQQNGVVERKNRTIINMAQN
KNNYFLLFID F+RKTWVYFVKEKSEVF MFKRFKALVEKESGYYI ALRSDRGGEFTSNEFKTF EN IRR+MTVPFTPQQNGVVERKNRTI+NMA++
Subjt: KNNYFLLFIDAFTRKTWVYFVKEKSEVFDMFKRFKALVEKESGYYI-ALRSDRGGEFTSNEFKTFYTENKIRRSMTVPFTPQQNGVVERKNRTIINMAQN
Query: MLKCKKMPKEFWAQVVECAVYLSNRSPTRSLWNKSP
MLKCKKMPKEFWAQ VECAVYLSNRSPTRSLWNK+P
Subjt: MLKCKKMPKEFWAQVVECAVYLSNRSPTRSLWNKSP
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| TYK18362.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 3.7e-174 | 90.48 | Show/hide |
Query: MCGSKSMFVEFDEFVGGDIVFGDATKIPVKGKGKMLINLKNGKHEFIANVYNVPNMKNNILSLGQLLEKGYSILMKDYSLLIRDNHDKIIAKVQMAKNRM
MCGSKSMF+E DE VGGDIVFGDATKIPVKGKGK+LINLKNGKHEFI+NVY VPNMKNNILSLGQLLEKGY+ILMKDYSLLIRDNHDKIIAKVQM KNRM
Subjt: MCGSKSMFVEFDEFVGGDIVFGDATKIPVKGKGKMLINLKNGKHEFIANVYNVPNMKNNILSLGQLLEKGYSILMKDYSLLIRDNHDKIIAKVQMAKNRM
Query: FLLNIQTNVAKCLKLCLKDPNWIWHLRFGHLNFDSLRLLARKDMVKGLPYVKHPDQLCEGYLHGKQSRKSFPQESSSRAKRPVELVHTDLCGLIKPSSFG
FLLNIQT+VA+CLK CLKDPNWIWHLRFGHLNFD LRLLARK+MVKGLPYVK PDQLCEG LHGKQSRKSFPQESS RA+RP+ELVHTDLCG IKPSSFG
Subjt: FLLNIQTNVAKCLKLCLKDPNWIWHLRFGHLNFDSLRLLARKDMVKGLPYVKHPDQLCEGYLHGKQSRKSFPQESSSRAKRPVELVHTDLCGLIKPSSFG
Query: KNNYFLLFIDAFTRKTWVYFVKEKSEVFDMFKRFKALVEKESGYYI-ALRSDRGGEFTSNEFKTFYTENKIRRSMTVPFTPQQNGVVERKNRTIINMAQN
KNNYFLLFID F+RKTWVYFVKEKSEVF MFKRFKALVEKESGYYI ALRSDRGGEFTSNEFKTF EN IRR+MTVPFTPQQNGVVERKNRTI+NMA++
Subjt: KNNYFLLFIDAFTRKTWVYFVKEKSEVFDMFKRFKALVEKESGYYI-ALRSDRGGEFTSNEFKTFYTENKIRRSMTVPFTPQQNGVVERKNRTIINMAQN
Query: MLKCKKMPKEFWAQVVECAVYLSNRSPTRSLWNKSP
MLKCKKMPKEFWAQ VECAVYLSNRSPTRSLWNK+P
Subjt: MLKCKKMPKEFWAQVVECAVYLSNRSPTRSLWNKSP
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| TYK29027.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 2.8e-174 | 90.77 | Show/hide |
Query: MCGSKSMFVEFDEFVGGDIVFGDATKIPVKGKGKMLINLKNGKHEFIANVYNVPNMKNNILSLGQLLEKGYSILMKDYSLLIRDNHDKIIAKVQMAKNRM
MCGSKSMFVE DE VGGDIVFGDATKIPVKGKGK+LINLKNGKHEFI+NVY VPNMKNNILSLGQLLEKGY+ILMKDYSLLIRDNHDKIIAKVQM KNRM
Subjt: MCGSKSMFVEFDEFVGGDIVFGDATKIPVKGKGKMLINLKNGKHEFIANVYNVPNMKNNILSLGQLLEKGYSILMKDYSLLIRDNHDKIIAKVQMAKNRM
Query: FLLNIQTNVAKCLKLCLKDPNWIWHLRFGHLNFDSLRLLARKDMVKGLPYVKHPDQLCEGYLHGKQSRKSFPQESSSRAKRPVELVHTDLCGLIKPSSFG
FLLNIQT+VA+CLK CLKDPNWIWHLRFGHLNFD LRLLARK+MVKGLPYVK PDQLCEG LHGKQSRKSFPQESS RA+RP+ELVHTDLCG IKPSSFG
Subjt: FLLNIQTNVAKCLKLCLKDPNWIWHLRFGHLNFDSLRLLARKDMVKGLPYVKHPDQLCEGYLHGKQSRKSFPQESSSRAKRPVELVHTDLCGLIKPSSFG
Query: KNNYFLLFIDAFTRKTWVYFVKEKSEVFDMFKRFKALVEKESGYYI-ALRSDRGGEFTSNEFKTFYTENKIRRSMTVPFTPQQNGVVERKNRTIINMAQN
KNNYFLLFID F+RKTWVYFVKEKSEVF MFKRFKALVEKESGYYI ALRSDRGGEFTSNEFKTF EN IRR+MTVPFTPQQNGVVERKNRTI+NMA++
Subjt: KNNYFLLFIDAFTRKTWVYFVKEKSEVFDMFKRFKALVEKESGYYI-ALRSDRGGEFTSNEFKTFYTENKIRRSMTVPFTPQQNGVVERKNRTIINMAQN
Query: MLKCKKMPKEFWAQVVECAVYLSNRSPTRSLWNKSP
MLKCKKMPKEFWAQ VECAVYLSNRSPTRSLWNK+P
Subjt: MLKCKKMPKEFWAQVVECAVYLSNRSPTRSLWNKSP
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SJX6 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.8e-174 | 90.48 | Show/hide |
Query: MCGSKSMFVEFDEFVGGDIVFGDATKIPVKGKGKMLINLKNGKHEFIANVYNVPNMKNNILSLGQLLEKGYSILMKDYSLLIRDNHDKIIAKVQMAKNRM
MCGSKSMF+E DE VGGDIVFGDATKIPVKGKGK+LINLKNGKHEFI+NVY VPNMKNNILSLGQLLEKGY+ILMKDYSLLIRDNHDKIIAKVQM KNRM
Subjt: MCGSKSMFVEFDEFVGGDIVFGDATKIPVKGKGKMLINLKNGKHEFIANVYNVPNMKNNILSLGQLLEKGYSILMKDYSLLIRDNHDKIIAKVQMAKNRM
Query: FLLNIQTNVAKCLKLCLKDPNWIWHLRFGHLNFDSLRLLARKDMVKGLPYVKHPDQLCEGYLHGKQSRKSFPQESSSRAKRPVELVHTDLCGLIKPSSFG
FLLNIQT+VA+CLK CLKDPNWIWHLRFGHLNFD LRLLARK+MVKGLPYVK PDQLCEG LHGKQSRKSFPQESS RA+RP+ELVHTDLCG IKPSSFG
Subjt: FLLNIQTNVAKCLKLCLKDPNWIWHLRFGHLNFDSLRLLARKDMVKGLPYVKHPDQLCEGYLHGKQSRKSFPQESSSRAKRPVELVHTDLCGLIKPSSFG
Query: KNNYFLLFIDAFTRKTWVYFVKEKSEVFDMFKRFKALVEKESGYYI-ALRSDRGGEFTSNEFKTFYTENKIRRSMTVPFTPQQNGVVERKNRTIINMAQN
KNNYFLLFID F+RKTWVYFVKEKSEVF MFKRFKALVEKESGYYI ALRSDRGGEFTSNEFKTF EN IRR+MTVPFTPQQNGVVERKNRTI+NMA++
Subjt: KNNYFLLFIDAFTRKTWVYFVKEKSEVFDMFKRFKALVEKESGYYI-ALRSDRGGEFTSNEFKTFYTENKIRRSMTVPFTPQQNGVVERKNRTIINMAQN
Query: MLKCKKMPKEFWAQVVECAVYLSNRSPTRSLWNKSP
MLKCKKMPKEFWAQ VECAVYLSNRSPTRSLWNK+P
Subjt: MLKCKKMPKEFWAQVVECAVYLSNRSPTRSLWNKSP
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| A0A5A7T0P8 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.0e-194 | 100 | Show/hide |
Query: MCGSKSMFVEFDEFVGGDIVFGDATKIPVKGKGKMLINLKNGKHEFIANVYNVPNMKNNILSLGQLLEKGYSILMKDYSLLIRDNHDKIIAKVQMAKNRM
MCGSKSMFVEFDEFVGGDIVFGDATKIPVKGKGKMLINLKNGKHEFIANVYNVPNMKNNILSLGQLLEKGYSILMKDYSLLIRDNHDKIIAKVQMAKNRM
Subjt: MCGSKSMFVEFDEFVGGDIVFGDATKIPVKGKGKMLINLKNGKHEFIANVYNVPNMKNNILSLGQLLEKGYSILMKDYSLLIRDNHDKIIAKVQMAKNRM
Query: FLLNIQTNVAKCLKLCLKDPNWIWHLRFGHLNFDSLRLLARKDMVKGLPYVKHPDQLCEGYLHGKQSRKSFPQESSSRAKRPVELVHTDLCGLIKPSSFG
FLLNIQTNVAKCLKLCLKDPNWIWHLRFGHLNFDSLRLLARKDMVKGLPYVKHPDQLCEGYLHGKQSRKSFPQESSSRAKRPVELVHTDLCGLIKPSSFG
Subjt: FLLNIQTNVAKCLKLCLKDPNWIWHLRFGHLNFDSLRLLARKDMVKGLPYVKHPDQLCEGYLHGKQSRKSFPQESSSRAKRPVELVHTDLCGLIKPSSFG
Query: KNNYFLLFIDAFTRKTWVYFVKEKSEVFDMFKRFKALVEKESGYYIALRSDRGGEFTSNEFKTFYTENKIRRSMTVPFTPQQNGVVERKNRTIINMAQNM
KNNYFLLFIDAFTRKTWVYFVKEKSEVFDMFKRFKALVEKESGYYIALRSDRGGEFTSNEFKTFYTENKIRRSMTVPFTPQQNGVVERKNRTIINMAQNM
Subjt: KNNYFLLFIDAFTRKTWVYFVKEKSEVFDMFKRFKALVEKESGYYIALRSDRGGEFTSNEFKTFYTENKIRRSMTVPFTPQQNGVVERKNRTIINMAQNM
Query: LKCKKMPKEFWAQVVECAVYLSNRSPTRSLWNKSP
LKCKKMPKEFWAQVVECAVYLSNRSPTRSLWNKSP
Subjt: LKCKKMPKEFWAQVVECAVYLSNRSPTRSLWNKSP
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| A0A5A7V308 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.8e-174 | 90.48 | Show/hide |
Query: MCGSKSMFVEFDEFVGGDIVFGDATKIPVKGKGKMLINLKNGKHEFIANVYNVPNMKNNILSLGQLLEKGYSILMKDYSLLIRDNHDKIIAKVQMAKNRM
MCGSKSMF+E DE VGGDIVFGDATKIPVKGKGK+LINLKNGKHEFI+NVY VPNMKNNILSLGQLLEKGY+ILMKDYSLLIRDNHDKIIAKVQM KNRM
Subjt: MCGSKSMFVEFDEFVGGDIVFGDATKIPVKGKGKMLINLKNGKHEFIANVYNVPNMKNNILSLGQLLEKGYSILMKDYSLLIRDNHDKIIAKVQMAKNRM
Query: FLLNIQTNVAKCLKLCLKDPNWIWHLRFGHLNFDSLRLLARKDMVKGLPYVKHPDQLCEGYLHGKQSRKSFPQESSSRAKRPVELVHTDLCGLIKPSSFG
FLLNIQT+VA+CLK CLKDPNWIWHLRFGHLNFD LRLLARK+MVKGLPYVK PDQLCEG LHGKQSRKSFPQESS RA+RP+ELVHTDLCG IKPSSFG
Subjt: FLLNIQTNVAKCLKLCLKDPNWIWHLRFGHLNFDSLRLLARKDMVKGLPYVKHPDQLCEGYLHGKQSRKSFPQESSSRAKRPVELVHTDLCGLIKPSSFG
Query: KNNYFLLFIDAFTRKTWVYFVKEKSEVFDMFKRFKALVEKESGYYI-ALRSDRGGEFTSNEFKTFYTENKIRRSMTVPFTPQQNGVVERKNRTIINMAQN
KNNYFLLFID F+RKTWVYFVKEKSEVF MFKRFKALVEKESGYYI ALRSDRGGEFTSNEFKTF EN IRR+MTVPFTPQQNGVVERKNRTI+NMA++
Subjt: KNNYFLLFIDAFTRKTWVYFVKEKSEVFDMFKRFKALVEKESGYYI-ALRSDRGGEFTSNEFKTFYTENKIRRSMTVPFTPQQNGVVERKNRTIINMAQN
Query: MLKCKKMPKEFWAQVVECAVYLSNRSPTRSLWNKSP
MLKCKKMPKEFWAQ VECAVYLSNRSPTRSLWNK+P
Subjt: MLKCKKMPKEFWAQVVECAVYLSNRSPTRSLWNKSP
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| A0A5A7V3X9 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.8e-174 | 90.48 | Show/hide |
Query: MCGSKSMFVEFDEFVGGDIVFGDATKIPVKGKGKMLINLKNGKHEFIANVYNVPNMKNNILSLGQLLEKGYSILMKDYSLLIRDNHDKIIAKVQMAKNRM
MCGSKSMF+E DE VGGDIVFGDATKIPVKGKGK+LINLKNGKHEFI+NVY VPNMKNNILSLGQLLEKGY+ILMKDYSLLIRDNHDKIIAKVQM KNRM
Subjt: MCGSKSMFVEFDEFVGGDIVFGDATKIPVKGKGKMLINLKNGKHEFIANVYNVPNMKNNILSLGQLLEKGYSILMKDYSLLIRDNHDKIIAKVQMAKNRM
Query: FLLNIQTNVAKCLKLCLKDPNWIWHLRFGHLNFDSLRLLARKDMVKGLPYVKHPDQLCEGYLHGKQSRKSFPQESSSRAKRPVELVHTDLCGLIKPSSFG
FLLNIQT+VA+CLK CLKDPNWIWHLRFGHLNFD LRLLARK+MVKGLPYVK PDQLCEG LHGKQSRKSFPQESS RA+RP+ELVHTDLCG IKPSSFG
Subjt: FLLNIQTNVAKCLKLCLKDPNWIWHLRFGHLNFDSLRLLARKDMVKGLPYVKHPDQLCEGYLHGKQSRKSFPQESSSRAKRPVELVHTDLCGLIKPSSFG
Query: KNNYFLLFIDAFTRKTWVYFVKEKSEVFDMFKRFKALVEKESGYYI-ALRSDRGGEFTSNEFKTFYTENKIRRSMTVPFTPQQNGVVERKNRTIINMAQN
KNNYFLLFID F+RKTWVYFVKEKSEVF MFKRFKALVEKESGYYI ALRSDRGGEFTSNEFKTF EN IRR+MTVPFTPQQNGVVERKNRTI+NMA++
Subjt: KNNYFLLFIDAFTRKTWVYFVKEKSEVFDMFKRFKALVEKESGYYI-ALRSDRGGEFTSNEFKTFYTENKIRRSMTVPFTPQQNGVVERKNRTIINMAQN
Query: MLKCKKMPKEFWAQVVECAVYLSNRSPTRSLWNKSP
MLKCKKMPKEFWAQ VECAVYLSNRSPTRSLWNK+P
Subjt: MLKCKKMPKEFWAQVVECAVYLSNRSPTRSLWNKSP
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| A0A5D3DYS0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.4e-174 | 90.77 | Show/hide |
Query: MCGSKSMFVEFDEFVGGDIVFGDATKIPVKGKGKMLINLKNGKHEFIANVYNVPNMKNNILSLGQLLEKGYSILMKDYSLLIRDNHDKIIAKVQMAKNRM
MCGSKSMFVE DE VGGDIVFGDATKIPVKGKGK+LINLKNGKHEFI+NVY VPNMKNNILSLGQLLEKGY+ILMKDYSLLIRDNHDKIIAKVQM KNRM
Subjt: MCGSKSMFVEFDEFVGGDIVFGDATKIPVKGKGKMLINLKNGKHEFIANVYNVPNMKNNILSLGQLLEKGYSILMKDYSLLIRDNHDKIIAKVQMAKNRM
Query: FLLNIQTNVAKCLKLCLKDPNWIWHLRFGHLNFDSLRLLARKDMVKGLPYVKHPDQLCEGYLHGKQSRKSFPQESSSRAKRPVELVHTDLCGLIKPSSFG
FLLNIQT+VA+CLK CLKDPNWIWHLRFGHLNFD LRLLARK+MVKGLPYVK PDQLCEG LHGKQSRKSFPQESS RA+RP+ELVHTDLCG IKPSSFG
Subjt: FLLNIQTNVAKCLKLCLKDPNWIWHLRFGHLNFDSLRLLARKDMVKGLPYVKHPDQLCEGYLHGKQSRKSFPQESSSRAKRPVELVHTDLCGLIKPSSFG
Query: KNNYFLLFIDAFTRKTWVYFVKEKSEVFDMFKRFKALVEKESGYYI-ALRSDRGGEFTSNEFKTFYTENKIRRSMTVPFTPQQNGVVERKNRTIINMAQN
KNNYFLLFID F+RKTWVYFVKEKSEVF MFKRFKALVEKESGYYI ALRSDRGGEFTSNEFKTF EN IRR+MTVPFTPQQNGVVERKNRTI+NMA++
Subjt: KNNYFLLFIDAFTRKTWVYFVKEKSEVFDMFKRFKALVEKESGYYI-ALRSDRGGEFTSNEFKTFYTENKIRRSMTVPFTPQQNGVVERKNRTIINMAQN
Query: MLKCKKMPKEFWAQVVECAVYLSNRSPTRSLWNKSP
MLKCKKMPKEFWAQ VECAVYLSNRSPTRSLWNK+P
Subjt: MLKCKKMPKEFWAQVVECAVYLSNRSPTRSLWNKSP
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 4.7e-39 | 34.21 | Show/hide |
Query: LINLKNGKHEFIANVYNVPNMKNNILSLGQLLEKGYSILMKDYSLLIRDNHDKIIAKVQMAKNRMFLLNIQTNVAKCLKLCLKDPNWIWHLRFGHLNFDS
++ L+N + +V N++S+ +L E G SI + I N ++ M N + ++N Q A + K+ +WH RFGH++
Subjt: LINLKNGKHEFIANVYNVPNMKNNILSLGQLLEKGYSILMKDYSLLIRDNHDKIIAKVQMAKNRMFLLNIQTNVAKCLKLCLKDPNWIWHLRFGHLNFDS
Query: LRLLARKDMVKGLPYVKHPD---QLCEGYLHGKQSRKSFPQ-ESSSRAKRPVELVHTDLCGLIKPSSFGKNNYFLLFIDAFTRKTWVYFVKEKSEVFDMF
L + RK+M + + + ++CE L+GKQ+R F Q + + KRP+ +VH+D+CG I P + NYF++F+D FT Y +K KS+VF MF
Subjt: LRLLARKDMVKGLPYVKHPD---QLCEGYLHGKQSRKSFPQ-ESSSRAKRPVELVHTDLCGLIKPSSFGKNNYFLLFIDAFTRKTWVYFVKEKSEVFDMF
Query: KRFKALVEKESGYYIA-LRSDRGGEFTSNEFKTFYTENKIRRSMTVPFTPQQNGVVERKNRTIINMAQNMLKCKKMPKEFWAQVVECAVYLSNRSPTRSL
+ F A E + L D G E+ SNE + F + I +TVP TPQ NGV ER RTI A+ M+ K+ K FW + V A YL NR P+R+L
Subjt: KRFKALVEKESGYYIA-LRSDRGGEFTSNEFKTFYTENKIRRSMTVPFTPQQNGVVERKNRTIINMAQNMLKCKKMPKEFWAQVVECAVYLSNRSPTRSL
Query: WNKS
+ S
Subjt: WNKS
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 4.3e-48 | 36.65 | Show/hide |
Query: FDEFVGGD---IVFGDATKIPVKGKGKMLINLKNGKHEFIANVYNVPNMKNNILSLGQLLEKGYSILMKDYSLLIRDNHDKIIAKVQMAKNRMFLLNIQT
F +V GD + G+ + + G G + I G + +V +VP+++ N++S L GY + + +IAK +A+ ++ N +
Subjt: FDEFVGGD---IVFGDATKIPVKGKGKMLINLKNGKHEFIANVYNVPNMKNNILSLGQLLEKGYSILMKDYSLLIRDNHDKIIAKVQMAKNRMFLLNIQT
Query: NVAKCLKLCLKDPNWIWHLRFGHLNFDSLRLLARKDMVKGLPYVKHPD-QLCEGYLHGKQSRKSFPQESSSRAKRPVELVHTDLCGLIKPSSFGKNNYFL
+ + +WH R GH++ L++LA+K ++ Y K + C+ L GKQ R SF Q SS R ++LV++D+CG ++ S G N YF+
Subjt: NVAKCLKLCLKDPNWIWHLRFGHLNFDSLRLLARKDMVKGLPYVKHPD-QLCEGYLHGKQSRKSFPQESSSRAKRPVELVHTDLCGLIKPSSFGKNNYFL
Query: LFIDAFTRKTWVYFVKEKSEVFDMFKRFKALVEKESGYYI-ALRSDRGGEFTSNEFKTFYTENKIRRSMTVPFTPQQNGVVERKNRTIINMAQNMLKCKK
FID +RK WVY +K K +VF +F++F ALVE+E+G + LRSD GGE+TS EF+ + + + IR TVP TPQ NGV ER NRTI+ ++ML+ K
Subjt: LFIDAFTRKTWVYFVKEKSEVFDMFKRFKALVEKESGYYI-ALRSDRGGEFTSNEFKTFYTENKIRRSMTVPFTPQQNGVVERKNRTIINMAQNMLKCKK
Query: MPKEFWAQVVECAVYLSNRSPT
+PK FW + V+ A YL NRSP+
Subjt: MPKEFWAQVVECAVYLSNRSPT
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| Q12491 Transposon Ty2-B Gag-Pol polyprotein | 4.9e-20 | 24.85 | Show/hide |
Query: DIVFGDATKIPVKGKGKMLINLKNGKHEFIANVYNVPNMKNNILSLGQLLEKGYSILMKDYSL----------LIRDNHDKIIAKVQMAKNRMFLLNIQT
+IV IP+ G + N +NG I + PN+ ++LSL +L + + +L +++ ++K + + + L I
Subjt: DIVFGDATKIPVKGKGKMLINLKNGKHEFIANVYNVPNMKNNILSLGQLLEKGYSILMKDYSL----------LIRDNHDKIIAKVQMAKNRMFLLNIQT
Query: NVAKCLKLCLKDPNWIWHLRFGHLNFDSLRLLARKDMVKGLPYVKHPD--------QLCEGYLHGKQSRKSFPQESS---SRAKRPVELVHTDLCGLIKP
NV K K K P + H GH NF S++ +K+ V Y+K D C L GK ++ + S + P + +HTD+ G +
Subjt: NVAKCLKLCLKDPNWIWHLRFGHLNFDSLRLLARKDMVKGLPYVKHPD--------QLCEGYLHGKQSRKSFPQESS---SRAKRPVELVHTDLCGLIKP
Query: SSFGKNNYFLLFIDAFTRKTWVYFVKEKSE--VFDMFKRFKALVEKE-SGYYIALRSDRGGEFTSNEFKTFYTENKIRRSMTVPFTPQQNGVVERKNRTI
+YF+ F D TR WVY + ++ E + ++F A ++ + + + ++ DRG E+T+ F+T I T + +GV ER NRT+
Subjt: SSFGKNNYFLLFIDAFTRKTWVYFVKEKSE--VFDMFKRFKALVEKE-SGYYIALRSDRGGEFTSNEFKTFYTENKIRRSMTVPFTPQQNGVVERKNRTI
Query: INMAQNMLKCKKMPKEFWAQVVECAVYLSN
+N + +L C +P W VE + + N
Subjt: INMAQNMLKCKKMPKEFWAQVVECAVYLSN
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 3.5e-26 | 28.4 | Show/hide |
Query: GGDIVFGDATKIPVKGKGKMLINLKNGKHEFIANVYNVPNMKNNILSLGQLLE-KGYSILMKDYSLLIRDNHDKIIAKVQMAKNRMFLLNIQTN--VAKC
G D++ D + IP+ G ++ K+ + + N+ VPN+ N++S+ +L G S+ S ++D + + K+ ++ I ++ V+
Subjt: GGDIVFGDATKIPVKGKGKMLINLKNGKHEFIANVYNVPNMKNNILSLGQLLE-KGYSILMKDYSLLIRDNHDKIIAKVQMAKNRMFLLNIQTN--VAKC
Query: LKLCLKDPNWIWHLRFGHLNFDSLRLLARKDMVKGLPYVKHPDQLCEGYLHGKQSRKSFPQESSSRAKRPVELVHTDLCGLIKPSSFGKNNYFLLFIDAF
K + WH R GH L + + L H C L K ++ F Q S+ + RP+E +++D+ S Y+++F+D F
Subjt: LKLCLKDPNWIWHLRFGHLNFDSLRLLARKDMVKGLPYVKHPDQLCEGYLHGKQSRKSFPQESSSRAKRPVELVHTDLCGLIKPSSFGKNNYFLLFIDAF
Query: TRKTWVYFVKEKSEVFDMFKRFKALVEKESGYYI-ALRSDRGGEFTSNEFKTFYTENKIRRSMTVPFTPQQNGVVERKNRTIINMAQNMLKCKKMPKEFW
TR TW+Y +K+KS+V + F FK L+E I SD GGEF + +++++ I + P TP+ NG+ ERK+R I+ +L +PK +W
Subjt: TRKTWVYFVKEKSEVFDMFKRFKALVEKESGYYI-ALRSDRGGEFTSNEFKTFYTENKIRRSMTVPFTPQQNGVVERKNRTIINMAQNMLKCKKMPKEFW
Query: AQVVECAVYLSNRSPTRSLWNKSP
AVYL NR PT L +SP
Subjt: AQVVECAVYLSNRSPTRSLWNKSP
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 2.4e-27 | 29.14 | Show/hide |
Query: GGDIVFGDATKIPVKGKGKMLINLKNGKHEFIANVYNVPNMKNNILSLGQLLEKG-YSILMKDYSLLIRDNHDKIIAKVQMAKNRMFLLNIQTN--VAKC
G D++ D + IP+ G + + + + V VPN+ N++S+ +L S+ S ++D + + K+ ++ I ++ V+
Subjt: GGDIVFGDATKIPVKGKGKMLINLKNGKHEFIANVYNVPNMKNNILSLGQLLEKG-YSILMKDYSLLIRDNHDKIIAKVQMAKNRMFLLNIQTN--VAKC
Query: LKLCLKDPNWIWHLRFGHLNFDSLRLLARKDMVKGLPYVKHPDQL--CEGYLHGKQSRKSFPQESSSRAKRPVELVHTDLCGLIKPSSFGKNNYFLLFID
C K + WH R GH SL +L LP + +L C K + F S+ + +P+E +++D+ S Y+++F+D
Subjt: LKLCLKDPNWIWHLRFGHLNFDSLRLLARKDMVKGLPYVKHPDQL--CEGYLHGKQSRKSFPQESSSRAKRPVELVHTDLCGLIKPSSFGKNNYFLLFID
Query: AFTRKTWVYFVKEKSEVFDMFKRFKALVEKESGYYI-ALRSDRGGEFTSNEFKTFYTENKIRRSMTVPFTPQQNGVVERKNRTIINMAQNMLKCKKMPKE
FTR TW+Y +K+KS+V D F FK+LVE I L SD GGEF + + +++ I + P TP+ NG+ ERK+R I+ M +L +PK
Subjt: AFTRKTWVYFVKEKSEVFDMFKRFKALVEKESGYYI-ALRSDRGGEFTSNEFKTFYTENKIRRSMTVPFTPQQNGVVERKNRTIINMAQNMLKCKKMPKE
Query: FWAQVVECAVYLSNRSPTRSLWNKSP
+W AVYL NR PT L +SP
Subjt: FWAQVVECAVYLSNRSPTRSLWNKSP
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